Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1157460 | XP_003624448.2 | 92.706 | 425 | 9 | 3 | 1 | 405 | 1 | 423 | 0.0 | 783 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1157460 | sp|Q9SGA2|GDPD1_ARATH | 60.686 | 379 | 108 | 5 | 46 | 403 | 1 | 359 | 2.40e-154 | 443 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1157460 | G7KW66 | 92.706 | 425 | 9 | 3 | 1 | 405 | 1 | 423 | 0.0 | 783 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1030580 | Msa1157460 | 0.862890 | 3.677644e-64 | -8.615850e-47 |
| Msa1120170 | Msa1157460 | 0.918899 | 8.805470e-87 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1157460 | MtrunA17_Chr7g0251681 | 92.706 | 425 | 9 | 3 | 1 | 405 | 1 | 423 | 0.0 | 783 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1157460 | AT3G02040.1 | 60.686 | 379 | 108 | 5 | 46 | 403 | 1 | 359 | 2.44e-155 | 443 |
| Msa1157460 | AT5G41080.1 | 58.268 | 381 | 127 | 5 | 46 | 403 | 1 | 372 | 6.59e-149 | 427 |
| Msa1157460 | AT5G41080.2 | 59.143 | 350 | 120 | 2 | 77 | 403 | 7 | 356 | 1.29e-145 | 418 |
| Msa1157460 | AT5G43300.1 | 52.035 | 344 | 139 | 4 | 85 | 403 | 28 | 370 | 9.35e-121 | 355 |
| Msa1157460 | AT5G43300.2 | 56.391 | 266 | 95 | 2 | 85 | 330 | 28 | 292 | 2.51e-103 | 308 |
Find 110 sgRNAs with CRISPR-Local
Find 225 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTAGACACATAGTAGAATT+TGG | 0.143971 | 7_4:+46461101 | Msa1157460:three_prime_UTR |
| TGTCCAATTACAACGAATTT+TGG | 0.149291 | 7_4:-46458747 | None:intergenic |
| GGTATTTATTTGAGGGAATT+TGG | 0.153410 | 7_4:-46458359 | None:intergenic |
| ATGCCAAAATTCGTTGTAAT+TGG | 0.159474 | 7_4:+46458744 | Msa1157460:CDS |
| TCTCAAAGTTGAACCTTCTT+TGG | 0.179312 | 7_4:+46460084 | Msa1157460:CDS |
| CTGAGATTAAAGGGATATTT+AGG | 0.216120 | 7_4:+46460572 | Msa1157460:CDS |
| AAGATGGAAAGATATATAAT+TGG | 0.239327 | 7_4:+46460017 | Msa1157460:CDS |
| TGCTGCATGTAAACCGCTTC+TGG | 0.257661 | 7_4:-46460795 | None:intergenic |
| TCTTCCTCCCCAATCTTTGC+TGG | 0.274045 | 7_4:-46460891 | None:intergenic |
| GGAATTGTTTCTGAGATTAA+AGG | 0.279889 | 7_4:+46460562 | Msa1157460:CDS |
| TGTCCTTCAAGCCATCTTAA+AGG | 0.281962 | 7_4:+46460168 | Msa1157460:CDS |
| TTAGACACATAGTAGAATTT+GGG | 0.298159 | 7_4:+46461102 | Msa1157460:three_prime_UTR |
| CTCAAAGTTGAACCTTCTTT+GGG | 0.302561 | 7_4:+46460085 | Msa1157460:CDS |
| AATAAAAGAGTTAATGTAAA+AGG | 0.311552 | 7_4:-46461081 | None:intergenic |
| TTTCATTGAATTTGATGTTC+AGG | 0.320866 | 7_4:+46458875 | Msa1157460:CDS |
| TGAAAAGTTGAGAATATAAT+AGG | 0.330593 | 7_4:-46460293 | None:intergenic |
| AGATTTGAGAAGGAACTCTT+TGG | 0.345870 | 7_4:+46460501 | Msa1157460:CDS |
| GGGAACACTGATGATAGTTT+AGG | 0.348892 | 7_4:+46461044 | Msa1157460:three_prime_UTR |
| TGGAGCTGTAAGCAAGATTA+AGG | 0.350925 | 7_4:+46460600 | Msa1157460:CDS |
| TTATCAGAGTTTCTTTCCTA+TGG | 0.353326 | 7_4:+46459944 | Msa1157460:CDS |
| GGTTTACATGCAGCACCTAA+TGG | 0.363218 | 7_4:+46460803 | Msa1157460:CDS |
| TACAAATGATTAAGCATTCA+TGG | 0.364964 | 7_4:-46461132 | None:intergenic |
| GTTTACATGCAGCACCTAAT+GGG | 0.372968 | 7_4:+46460804 | Msa1157460:CDS |
| AGGGTTTGGCCGAAGGGATT+GGG | 0.373691 | 7_4:+46460913 | Msa1157460:CDS |
| AGCAAAGATTGGGGAGGAAG+AGG | 0.375857 | 7_4:+46460893 | Msa1157460:CDS |
| GATTGGGGAGGAAGAGGGTT+TGG | 0.378842 | 7_4:+46460899 | Msa1157460:CDS |
| AATCTCTCTCTTCTAACATA+TGG | 0.380053 | 7_4:+46460628 | Msa1157460:CDS |
| AAGCTTGTTCATAAACAATA+TGG | 0.381299 | 7_4:-46460135 | None:intergenic |
| AGCAGCATTAAAAGACATAA+TGG | 0.382783 | 7_4:-46458835 | None:intergenic |
| GAATTGTTTCTGAGATTAAA+GGG | 0.391330 | 7_4:+46460563 | Msa1157460:CDS |
| GAGGGTTTGGCCGAAGGGAT+TGG | 0.403373 | 7_4:+46460912 | Msa1157460:CDS |
| GGAGGCTTTGAAACTCAGTT+TGG | 0.410209 | 7_4:+46460525 | Msa1157460:CDS |
| TCACTTGAGGATGAAGGAAA+TGG | 0.417148 | 7_4:+46461174 | Msa1157460:three_prime_UTR |
| ATGATGAAGCCAGCAAAGAT+TGG | 0.421649 | 7_4:+46460882 | Msa1157460:CDS |
| TGATGAAGCCAGCAAAGATT+GGG | 0.421680 | 7_4:+46460883 | Msa1157460:CDS |
| CAGCACCTAATGGGGATTGA+TGG | 0.426147 | 7_4:+46460813 | Msa1157460:CDS |
| GGTACGTACCGCTAGGAAAA+CGG | 0.428995 | 7_4:-46458567 | None:intergenic |
| TTAATCTTGCTTACAGCTCC+AGG | 0.431798 | 7_4:-46460598 | None:intergenic |
| ATATGTTAGAAGAGAGAGAT+TGG | 0.434124 | 7_4:-46460626 | None:intergenic |
| TTGAAACTCAGTTTGGAGAA+TGG | 0.434946 | 7_4:+46460532 | Msa1157460:CDS |
| AACCTTGGGGTATTTATTTG+AGG | 0.437368 | 7_4:-46458367 | None:intergenic |
| TTTGGTAATGAATTAAGATT+GGG | 0.441137 | 7_4:-46458427 | None:intergenic |
| TATCAGAGTTTCTTTCCTAT+GGG | 0.444504 | 7_4:+46459945 | Msa1157460:CDS |
| AGATGGAAAGATATATAATT+GGG | 0.444899 | 7_4:+46460018 | Msa1157460:CDS |
| AGGAATGGAAGGAAAAGTTT+TGG | 0.446126 | 7_4:+46459982 | Msa1157460:CDS |
| AAAGGGATATTTAGGAATCC+TGG | 0.447524 | 7_4:+46460580 | Msa1157460:CDS |
| CTTTGAGAAATGCTTCTTGA+AGG | 0.451089 | 7_4:-46460069 | None:intergenic |
| CGAACAAGTATTGCTGCATC+AGG | 0.451896 | 7_4:-46460317 | None:intergenic |
| ATTATGTATGAAAATTAGCT+TGG | 0.455702 | 7_4:+46461199 | Msa1157460:three_prime_UTR |
| GTACCTTTAAGATGGCTTGA+AGG | 0.459178 | 7_4:-46460171 | None:intergenic |
| GGGGAGAGGAGGGAGAGGGA+GGG | 0.459691 | 7_4:-46458544 | None:intergenic |
| TCACCCCATCAATCCCCATT+AGG | 0.460955 | 7_4:-46460818 | None:intergenic |
| TGAGTTCTTCCCAATCCCTT+CGG | 0.461892 | 7_4:-46460922 | None:intergenic |
| AGAAATAACAGAGGCGGTTG+CGG | 0.465009 | 7_4:+46460857 | Msa1157460:CDS |
| ACGGCTTTGAGAGCCATGTT+AGG | 0.467523 | 7_4:-46458478 | None:intergenic |
| ACCTTGGGGTATTTATTTGA+GGG | 0.468470 | 7_4:-46458366 | None:intergenic |
| CTTTAAAGCAATAGCAATTG+TGG | 0.470865 | 7_4:-46460993 | None:intergenic |
| TTTCTCTCTTTCACCTAACA+TGG | 0.474646 | 7_4:+46458465 | Msa1157460:CDS |
| TTTGAGAAGGAACTCTTTGG+AGG | 0.476549 | 7_4:+46460504 | Msa1157460:CDS |
| GAGGAAGAGGGTTTGGCCGA+AGG | 0.478432 | 7_4:+46460906 | Msa1157460:CDS |
| AAAGAAAAGAAAGCTCCTGC+TGG | 0.480481 | 7_4:-46460959 | None:intergenic |
| TATGAATGTGTTACAATCTA+CGG | 0.500744 | 7_4:+46458782 | Msa1157460:CDS |
| TTGCTTTAAAGAAGAAGAGA+TGG | 0.503337 | 7_4:+46461005 | Msa1157460:exon |
| AGGAAGAGGGTTTGGCCGAA+GGG | 0.509155 | 7_4:+46460907 | Msa1157460:CDS |
| TGAAGGTGGGAGAGAAACCT+TGG | 0.511002 | 7_4:-46458382 | None:intergenic |
| AGCACCTAATGGGGATTGAT+GGG | 0.513719 | 7_4:+46460814 | Msa1157460:CDS |
| GAGAAGGAACTCTTTGGAGG+AGG | 0.514894 | 7_4:+46460507 | Msa1157460:CDS |
| GAAGGTGGGAGAGAAACCTT+GGG | 0.520570 | 7_4:-46458381 | None:intergenic |
| TTTGAGAAATGCTTCTTGAA+GGG | 0.525807 | 7_4:-46460068 | None:intergenic |
| TATGGGCTTCAAAGAGAGGC+AGG | 0.530911 | 7_4:+46459962 | Msa1157460:CDS |
| TGCTTTAAAGAAGAAGAGAT+GGG | 0.532380 | 7_4:+46461006 | Msa1157460:exon |
| GCAAAGATTGGGGAGGAAGA+GGG | 0.539261 | 7_4:+46460894 | Msa1157460:CDS |
| ATGTATGAAAATTAGCTTGG+AGG | 0.540399 | 7_4:+46461202 | Msa1157460:three_prime_UTR |
| GTAATTGGACATAGAGGAAA+CGG | 0.541049 | 7_4:+46458759 | Msa1157460:CDS |
| TTGGAGATGAGCAATGGTGA+TGG | 0.541138 | 7_4:+46458714 | Msa1157460:CDS |
| GCTTCAAAGAGAGGCAGGAA+TGG | 0.544974 | 7_4:+46459967 | Msa1157460:CDS |
| TTCGTTGTAATTGGACATAG+AGG | 0.548869 | 7_4:+46458753 | Msa1157460:CDS |
| TTCCTATGGGCTTCAAAGAG+AGG | 0.559843 | 7_4:+46459958 | Msa1157460:CDS |
| TTACTGATTATGCTAAGGAT+AGG | 0.562411 | 7_4:+46460270 | Msa1157460:CDS |
| AACTCTGATAAACACAACTC+AGG | 0.562675 | 7_4:-46459932 | None:intergenic |
| CAAAGAGAGGCAGGAATGGA+AGG | 0.567526 | 7_4:+46459971 | Msa1157460:CDS |
| TCAAATTCAATGAAATCAAG+AGG | 0.567530 | 7_4:-46458867 | None:intergenic |
| AAATTTATGAAGATTTGAGA+AGG | 0.568256 | 7_4:+46460491 | Msa1157460:CDS |
| AAGAAAAGAAAGCTCCTGCT+GGG | 0.569172 | 7_4:-46460958 | None:intergenic |
| AGGGACATCGGAGACGTGGA+CGG | 0.575927 | 7_4:-46458497 | None:intergenic |
| TCAATGTTAAAACCCAAAGA+AGG | 0.576235 | 7_4:-46460097 | None:intergenic |
| AAGAGTTAATGTAAAAGGAG+AGG | 0.577756 | 7_4:-46461076 | None:intergenic |
| GGTTGTTACTGATTATGCTA+AGG | 0.578866 | 7_4:+46460265 | Msa1157460:intron |
| AAGATCGAGGGAAGGGACAT+CGG | 0.579041 | 7_4:-46458509 | None:intergenic |
| GATGATGATGAAGATGAAGG+TGG | 0.581432 | 7_4:-46458396 | None:intergenic |
| AGCTCCTGCTGGGAAAATTG+AGG | 0.583529 | 7_4:-46460948 | None:intergenic |
| AGTTTGGAGAATGGATTGAA+AGG | 0.583600 | 7_4:+46460541 | Msa1157460:CDS |
| CAGGGACAAGATCGAGGGAA+GGG | 0.588983 | 7_4:-46458516 | None:intergenic |
| ATGATGATGAAGATGAAGGT+GGG | 0.593395 | 7_4:-46458395 | None:intergenic |
| GATGATGATGATGAAGATGA+AGG | 0.596204 | 7_4:-46458399 | None:intergenic |
| TGACAGTAATGTTCCAGAAG+CGG | 0.597283 | 7_4:+46460782 | Msa1157460:intron |
| GGGAAGGGACATCGGAGACG+TGG | 0.600097 | 7_4:-46458501 | None:intergenic |
| TTTACATGCAGCACCTAATG+GGG | 0.605831 | 7_4:+46460805 | Msa1157460:CDS |
| TCCCTCAAATAAATACCCCA+AGG | 0.608620 | 7_4:+46458365 | Msa1157460:CDS |
| TCAGGGACAAGATCGAGGGA+AGG | 0.614252 | 7_4:-46458517 | None:intergenic |
| TAGACACATAGTAGAATTTG+GGG | 0.617688 | 7_4:+46461103 | Msa1157460:three_prime_UTR |
| ATGTGTTACAATCTACGGAT+CGG | 0.624199 | 7_4:+46458787 | Msa1157460:CDS |
| GATGAAGCCAGCAAAGATTG+GGG | 0.647050 | 7_4:+46460884 | Msa1157460:CDS |
| TGCCTCTCTTTGAAGCCCAT+AGG | 0.647075 | 7_4:-46459960 | None:intergenic |
| TGTGCAAGAAATAACAGAGG+CGG | 0.669888 | 7_4:+46460851 | Msa1157460:CDS |
| GCACCTAATGGGGATTGATG+GGG | 0.682183 | 7_4:+46460815 | Msa1157460:CDS |
| GAAGCCAGCAAAGATTGGGG+AGG | 0.683522 | 7_4:+46460887 | Msa1157460:CDS |
| TCAGGTTTGGAGATGAGCAA+TGG | 0.690070 | 7_4:+46458708 | Msa1157460:intron |
| AAGGTGGGAGAGAAACCTTG+GGG | 0.788974 | 7_4:-46458380 | None:intergenic |
| CGTACCGCTAGGAAAACGGG+GGG | 0.801803 | 7_4:-46458563 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTGTAAAAATATTTAATAA+CGG | - | chr7_4:46459415-46459434 | None:intergenic | 10.0% |
| !! | AATAAAATATTAAATGACTA+AGG | + | chr7_4:46459628-46459647 | Msa1157460:intron | 10.0% |
| !!! | ATTTAATTTTCATAAATGAT+CGG | - | chr7_4:46459816-46459835 | None:intergenic | 10.0% |
| !!! | TTATTTTATTTATCACGTAT+CGG | + | chr7_4:46458624-46458643 | Msa1157460:intron | 15.0% |
| !!! | GAAAGAAAAAAAATAGTTTT+TGG | + | chr7_4:46459215-46459234 | Msa1157460:intron | 15.0% |
| !!! | ATAGTTAAATTTGTTCAAAA+GGG | - | chr7_4:46460377-46460396 | None:intergenic | 15.0% |
| !! | AATAAAAGAGTTAATGTAAA+AGG | - | chr7_4:46461084-46461103 | None:intergenic | 15.0% |
| !!! | TTTGGTAATGAATTAAGATT+GGG | - | chr7_4:46458430-46458449 | None:intergenic | 20.0% |
| !!! | TTTTGGTAATGAATTAAGAT+TGG | - | chr7_4:46458431-46458450 | None:intergenic | 20.0% |
| !!! | TATTTTATTTATCACGTATC+GGG | + | chr7_4:46458625-46458644 | Msa1157460:intron | 20.0% |
| !!! | TATGATTTTGTTTTTTGATC+AGG | + | chr7_4:46458690-46458709 | Msa1157460:intron | 20.0% |
| !!! | CTAATAATTTTCGTGTTTTT+CGG | - | chr7_4:46458969-46458988 | None:intergenic | 20.0% |
| !! | TATTTCTCGTAAATAAGTTT+GGG | + | chr7_4:46459099-46459118 | Msa1157460:intron | 20.0% |
| !!! | TCTGTTAATTTTTTTCCTTT+TGG | + | chr7_4:46459171-46459190 | Msa1157460:intron | 20.0% |
| !!! | CTGTTAATTTTTTTCCTTTT+GGG | + | chr7_4:46459172-46459191 | Msa1157460:intron | 20.0% |
| !! | TTTGGATTAAAAAAGTTTGA+AGG | + | chr7_4:46459233-46459252 | Msa1157460:intron | 20.0% |
| !! | TTAAAAAGTGACACTTAAAA+GGG | + | chr7_4:46459725-46459744 | Msa1157460:intron | 20.0% |
| !! | AAGATGGAAAGATATATAAT+TGG | + | chr7_4:46460017-46460036 | Msa1157460:CDS | 20.0% |
| !! | AGATGGAAAGATATATAATT+GGG | + | chr7_4:46460018-46460037 | Msa1157460:CDS | 20.0% |
| !!! | TTTTAACTTGATGAATGTTT+TGG | + | chr7_4:46460238-46460257 | Msa1157460:intron | 20.0% |
| !! | TGAAAAGTTGAGAATATAAT+AGG | - | chr7_4:46460296-46460315 | None:intergenic | 20.0% |
| !!! | CATAGTTAAATTTGTTCAAA+AGG | - | chr7_4:46460378-46460397 | None:intergenic | 20.0% |
| !!! | TATGATGAAGTTGTTTTTTT+TGG | + | chr7_4:46460394-46460413 | Msa1157460:intron | 20.0% |
| !!! | TTTTCTTTTTAACTAATGGA+GGG | + | chr7_4:46460464-46460483 | Msa1157460:CDS | 20.0% |
| !! | AAATTTATGAAGATTTGAGA+AGG | + | chr7_4:46460491-46460510 | Msa1157460:CDS | 20.0% |
| !! | ATGGAAAATTAAAGTATGTT+TGG | + | chr7_4:46460647-46460666 | Msa1157460:intron | 20.0% |
| !! | ACAATTATGGAAAAAACAAT+TGG | - | chr7_4:46460715-46460734 | None:intergenic | 20.0% |
| !! | ATTATGTATGAAAATTAGCT+TGG | + | chr7_4:46461199-46461218 | Msa1157460:three_prime_UTR | 20.0% |
| !! | AAAGAAAAAGAGAGAGATTT+TGG | - | chr7_4:46458448-46458467 | None:intergenic | 25.0% |
| ! | TGAATGTTAATGTAATGGTA+TGG | - | chr7_4:46458591-46458610 | None:intergenic | 25.0% |
| ! | ATGGATGAATGTTAATGTAA+TGG | - | chr7_4:46458596-46458615 | None:intergenic | 25.0% |
| ! | AAATAAAATAAGAACGTGCA+TGG | - | chr7_4:46458615-46458634 | None:intergenic | 25.0% |
| !!! | TTTTGTTTTTTGATCAGGTT+TGG | + | chr7_4:46458695-46458714 | Msa1157460:intron | 25.0% |
| ! | TATGAATGTGTTACAATCTA+CGG | + | chr7_4:46458782-46458801 | Msa1157460:CDS | 25.0% |
| ! | TCAAATTCAATGAAATCAAG+AGG | - | chr7_4:46458870-46458889 | None:intergenic | 25.0% |
| ! | TTTCATTGAATTTGATGTTC+AGG | + | chr7_4:46458875-46458894 | Msa1157460:CDS | 25.0% |
| ! | TATTTACGAGAAATACCATA+GGG | - | chr7_4:46459094-46459113 | None:intergenic | 25.0% |
| ! | TTATTTACGAGAAATACCAT+AGG | - | chr7_4:46459095-46459114 | None:intergenic | 25.0% |
| ! | GTATTTCTCGTAAATAAGTT+TGG | + | chr7_4:46459098-46459117 | Msa1157460:intron | 25.0% |
| ! | ATTTCTCGTAAATAAGTTTG+GGG | + | chr7_4:46459100-46459119 | Msa1157460:intron | 25.0% |
| !! | TAAATAAGTTTGGGGTTTAA+GGG | + | chr7_4:46459108-46459127 | Msa1157460:intron | 25.0% |
| !!! | AATTTTTTTCCTTTTGGGTT+TGG | + | chr7_4:46459177-46459196 | Msa1157460:intron | 25.0% |
| ! | TAAAAAATTCCAAACCCAAA+AGG | - | chr7_4:46459189-46459208 | None:intergenic | 25.0% |
| ! | TAAATAACTAAGGGTAATGT+TGG | - | chr7_4:46459586-46459605 | None:intergenic | 25.0% |
| ! | TTACCCTTAGTTATTTATTG+TGG | + | chr7_4:46459589-46459608 | Msa1157460:intron | 25.0% |
| ! | TCTCCACAATAAATAACTAA+GGG | - | chr7_4:46459595-46459614 | None:intergenic | 25.0% |
| ! | GTTAAAAAGTGACACTTAAA+AGG | + | chr7_4:46459724-46459743 | Msa1157460:intron | 25.0% |
| !! | AAGCTTGTTCATAAACAATA+TGG | - | chr7_4:46460138-46460157 | None:intergenic | 25.0% |
| !!! | AATTTTCTGTACCTTTAAGA+TGG | - | chr7_4:46460182-46460201 | None:intergenic | 25.0% |
| ! | ACTATCAAATACCAAACATA+TGG | - | chr7_4:46460218-46460237 | None:intergenic | 25.0% |
| !!! | CAGGTTTTCTTTTTAACTAA+TGG | + | chr7_4:46460460-46460479 | Msa1157460:intron | 25.0% |
| !!! | GTTTTCTTTTTAACTAATGG+AGG | + | chr7_4:46460463-46460482 | Msa1157460:CDS | 25.0% |
| !!! | GAATTGTTTCTGAGATTAAA+GGG | + | chr7_4:46460563-46460582 | Msa1157460:CDS | 25.0% |
| !!! | TACATGTTATTGGTCTTTTT+TGG | + | chr7_4:46460688-46460707 | Msa1157460:intron | 25.0% |
| ! | CATTACATTCAACACAATTA+TGG | - | chr7_4:46460728-46460747 | None:intergenic | 25.0% |
| !!! | AGATGGGTTTTAATTTGATT+TGG | + | chr7_4:46461022-46461041 | Msa1157460:three_prime_UTR | 25.0% |
| !!! | GATGGGTTTTAATTTGATTT+GGG | + | chr7_4:46461023-46461042 | Msa1157460:three_prime_UTR | 25.0% |
| !!! | ATGGGTTTTAATTTGATTTG+GGG | + | chr7_4:46461024-46461043 | Msa1157460:three_prime_UTR | 25.0% |
| ! | ATTAGACACATAGTAGAATT+TGG | + | chr7_4:46461101-46461120 | Msa1157460:three_prime_UTR | 25.0% |
| ! | TTAGACACATAGTAGAATTT+GGG | + | chr7_4:46461102-46461121 | Msa1157460:three_prime_UTR | 25.0% |
| ! | TACAAATGATTAAGCATTCA+TGG | - | chr7_4:46461135-46461154 | None:intergenic | 25.0% |
| GGTATTTATTTGAGGGAATT+TGG | - | chr7_4:46458362-46458381 | None:intergenic | 30.0% | |
| ATGCCAAAATTCGTTGTAAT+TGG | + | chr7_4:46458744-46458763 | Msa1157460:CDS | 30.0% | |
| ! | TGTCCAATTACAACGAATTT+TGG | - | chr7_4:46458750-46458769 | None:intergenic | 30.0% |
| !! | CATAATGGAGTTTTCTTTGA+TGG | - | chr7_4:46458823-46458842 | None:intergenic | 30.0% |
| AGCAGCATTAAAAGACATAA+TGG | - | chr7_4:46458838-46458857 | None:intergenic | 30.0% | |
| ATTTACGAGAAATACCATAG+GGG | - | chr7_4:46459093-46459112 | None:intergenic | 30.0% | |
| ! | GTAAATAAGTTTGGGGTTTA+AGG | + | chr7_4:46459107-46459126 | Msa1157460:intron | 30.0% |
| AAGTGACACTTAAAAAGGAA+CGG | - | chr7_4:46459494-46459513 | None:intergenic | 30.0% | |
| !!! | TCCTTTTTAAGTGTCACTTT+TGG | + | chr7_4:46459495-46459514 | Msa1157460:intron | 30.0% |
| TCCAAAAGTGACACTTAAAA+AGG | - | chr7_4:46459499-46459518 | None:intergenic | 30.0% | |
| CTCTCCACAATAAATAACTA+AGG | - | chr7_4:46459596-46459615 | None:intergenic | 30.0% | |
| !!! | AGTTAAATGTGAGGGTATTT+TGG | + | chr7_4:46459874-46459893 | Msa1157460:intron | 30.0% |
| !!! | GTTAAATGTGAGGGTATTTT+GGG | + | chr7_4:46459875-46459894 | Msa1157460:intron | 30.0% |
| !!! | TTAAATGTGAGGGTATTTTG+GGG | + | chr7_4:46459876-46459895 | Msa1157460:intron | 30.0% |
| ! | TTTTTACAGGGTAATGTGTT+TGG | + | chr7_4:46459899-46459918 | Msa1157460:intron | 30.0% |
| ! | TTTTACAGGGTAATGTGTTT+GGG | + | chr7_4:46459900-46459919 | Msa1157460:intron | 30.0% |
| TTATCAGAGTTTCTTTCCTA+TGG | + | chr7_4:46459944-46459963 | Msa1157460:CDS | 30.0% | |
| TATCAGAGTTTCTTTCCTAT+GGG | + | chr7_4:46459945-46459964 | Msa1157460:CDS | 30.0% | |
| TTGGTGAGAAAAACAAAAGA+TGG | + | chr7_4:46460001-46460020 | Msa1157460:CDS | 30.0% | |
| TTTGAGAAATGCTTCTTGAA+GGG | - | chr7_4:46460071-46460090 | None:intergenic | 30.0% | |
| TCAATGTTAAAACCCAAAGA+AGG | - | chr7_4:46460100-46460119 | None:intergenic | 30.0% | |
| TATTTGCAGTACCATATGTT+TGG | + | chr7_4:46460204-46460223 | Msa1157460:intron | 30.0% | |
| ! | TTACTGATTATGCTAAGGAT+AGG | + | chr7_4:46460270-46460289 | Msa1157460:CDS | 30.0% |
| TATTGTGTGTGATTCTAACA+TGG | + | chr7_4:46460418-46460437 | Msa1157460:intron | 30.0% | |
| ATTGTGTGTGATTCTAACAT+GGG | + | chr7_4:46460419-46460438 | Msa1157460:intron | 30.0% | |
| !! | GGAATTGTTTCTGAGATTAA+AGG | + | chr7_4:46460562-46460581 | Msa1157460:CDS | 30.0% |
| CTGAGATTAAAGGGATATTT+AGG | + | chr7_4:46460572-46460591 | Msa1157460:CDS | 30.0% | |
| ATATGTTAGAAGAGAGAGAT+TGG | - | chr7_4:46460629-46460648 | None:intergenic | 30.0% | |
| AATCTCTCTCTTCTAACATA+TGG | + | chr7_4:46460628-46460647 | Msa1157460:CDS | 30.0% | |
| AATAACATGTAACATGAGAG+TGG | - | chr7_4:46460679-46460698 | None:intergenic | 30.0% | |
| ACTCTCATGTTACATGTTAT+TGG | + | chr7_4:46460678-46460697 | Msa1157460:intron | 30.0% | |
| !!! | GATACTGATATTTGCTGTTT+TGG | + | chr7_4:46460753-46460772 | Msa1157460:intron | 30.0% |
| ! | TTTTGTGCAAGAAATAACAG+AGG | + | chr7_4:46460848-46460867 | Msa1157460:CDS | 30.0% |
| !! | CTTTAAAGCAATAGCAATTG+TGG | - | chr7_4:46460996-46461015 | None:intergenic | 30.0% |
| !! | TTGCTTTAAAGAAGAAGAGA+TGG | + | chr7_4:46461005-46461024 | Msa1157460:exon | 30.0% |
| !! | TGCTTTAAAGAAGAAGAGAT+GGG | + | chr7_4:46461006-46461025 | Msa1157460:exon | 30.0% |
| AAGAGTTAATGTAAAAGGAG+AGG | - | chr7_4:46461079-46461098 | None:intergenic | 30.0% | |
| TAGACACATAGTAGAATTTG+GGG | + | chr7_4:46461103-46461122 | Msa1157460:three_prime_UTR | 30.0% | |
| ! | GATTTTCTTCTTTTCACTTG+AGG | + | chr7_4:46461161-46461180 | Msa1157460:three_prime_UTR | 30.0% |
| ! | ATGTATGAAAATTAGCTTGG+AGG | + | chr7_4:46461202-46461221 | Msa1157460:three_prime_UTR | 30.0% |
| ! | ACCTTGGGGTATTTATTTGA+GGG | - | chr7_4:46458369-46458388 | None:intergenic | 35.0% |
| ! | AACCTTGGGGTATTTATTTG+AGG | - | chr7_4:46458370-46458389 | None:intergenic | 35.0% |
| ! | ATGATGATGAAGATGAAGGT+GGG | - | chr7_4:46458398-46458417 | None:intergenic | 35.0% |
| ! | GATGATGATGATGAAGATGA+AGG | - | chr7_4:46458402-46458421 | None:intergenic | 35.0% |
| TTTCTCTCTTTCACCTAACA+TGG | + | chr7_4:46458465-46458484 | Msa1157460:CDS | 35.0% | |
| TTCGTTGTAATTGGACATAG+AGG | + | chr7_4:46458753-46458772 | Msa1157460:CDS | 35.0% | |
| GTAATTGGACATAGAGGAAA+CGG | + | chr7_4:46458759-46458778 | Msa1157460:CDS | 35.0% | |
| ATGTGTTACAATCTACGGAT+CGG | + | chr7_4:46458787-46458806 | Msa1157460:CDS | 35.0% | |
| ! | GCATGTTCTTTTTCCAGTTT+CGG | + | chr7_4:46459014-46459033 | Msa1157460:intron | 35.0% |
| AATAGGAAACCCAGAAAAAG+CGG | - | chr7_4:46459067-46459086 | None:intergenic | 35.0% | |
| AAATACCATAGGGGCAAAAT+AGG | - | chr7_4:46459084-46459103 | None:intergenic | 35.0% | |
| ! | TTAAGGGTTTTTCTGTGGTT+TGG | + | chr7_4:46459124-46459143 | Msa1157460:intron | 35.0% |
| AATCATCGTGGAAAATGACT+GGG | - | chr7_4:46459333-46459352 | None:intergenic | 35.0% | |
| TAATCATCGTGGAAAATGAC+TGG | - | chr7_4:46459334-46459353 | None:intergenic | 35.0% | |
| AAGTGACACTTAAAAGGGAA+CGG | + | chr7_4:46459730-46459749 | Msa1157460:intron | 35.0% | |
| !! | CGATGATTGTGATTTGTTGA+CGG | + | chr7_4:46459779-46459798 | Msa1157460:intron | 35.0% |
| ! | AGTGCTTTGAGTTAAATGTG+AGG | + | chr7_4:46459865-46459884 | Msa1157460:intron | 35.0% |
| ! | GTGCTTTGAGTTAAATGTGA+GGG | + | chr7_4:46459866-46459885 | Msa1157460:intron | 35.0% |
| !!! | GGTATTTTGGGGTTTTTACA+GGG | + | chr7_4:46459887-46459906 | Msa1157460:intron | 35.0% |
| AACTCTGATAAACACAACTC+AGG | - | chr7_4:46459935-46459954 | None:intergenic | 35.0% | |
| ! | AGGAATGGAAGGAAAAGTTT+TGG | + | chr7_4:46459982-46460001 | Msa1157460:CDS | 35.0% |
| ! | CTTTGAGAAATGCTTCTTGA+AGG | - | chr7_4:46460072-46460091 | None:intergenic | 35.0% |
| TCTCAAAGTTGAACCTTCTT+TGG | + | chr7_4:46460084-46460103 | Msa1157460:CDS | 35.0% | |
| CTCAAAGTTGAACCTTCTTT+GGG | + | chr7_4:46460085-46460104 | Msa1157460:CDS | 35.0% | |
| !!! | CTTGATGAATGTTTTGGAAC+AGG | + | chr7_4:46460244-46460263 | Msa1157460:intron | 35.0% |
| ! | GGTTGTTACTGATTATGCTA+AGG | + | chr7_4:46460265-46460284 | Msa1157460:intron | 35.0% |
| !!! | AACATGGGTTGGTGATTTTT+TGG | + | chr7_4:46460434-46460453 | Msa1157460:intron | 35.0% |
| AGATTTGAGAAGGAACTCTT+TGG | + | chr7_4:46460501-46460520 | Msa1157460:CDS | 35.0% | |
| TTGAAACTCAGTTTGGAGAA+TGG | + | chr7_4:46460532-46460551 | Msa1157460:CDS | 35.0% | |
| !! | AGTTTGGAGAATGGATTGAA+AGG | + | chr7_4:46460541-46460560 | Msa1157460:CDS | 35.0% |
| AAAGGGATATTTAGGAATCC+TGG | + | chr7_4:46460580-46460599 | Msa1157460:CDS | 35.0% | |
| ! | TTCTTTTCACTTGAGGATGA+AGG | + | chr7_4:46461168-46461187 | Msa1157460:three_prime_UTR | 35.0% |
| TCCCTCAAATAAATACCCCA+AGG | + | chr7_4:46458365-46458384 | Msa1157460:CDS | 40.0% | |
| ! | GATGATGATGAAGATGAAGG+TGG | - | chr7_4:46458399-46458418 | None:intergenic | 40.0% |
| !! | ATTTTCAGGGACAAGATCGA+GGG | - | chr7_4:46458524-46458543 | None:intergenic | 40.0% |
| ATGAGTTCAGATCAGATACG+CGG | - | chr7_4:46459043-46459062 | None:intergenic | 40.0% | |
| ! | TAAAGCAAAAGTGCATCGTG+TGG | + | chr7_4:46459280-46459299 | Msa1157460:intron | 40.0% |
| !!! | TGCATCGTGTGGTTTTTTGT+AGG | + | chr7_4:46459291-46459310 | Msa1157460:intron | 40.0% |
| GAGAGTAGATGTAATCATCG+TGG | - | chr7_4:46459345-46459364 | None:intergenic | 40.0% | |
| GACACTTAAAAAGGAACGGA+GGG | - | chr7_4:46459490-46459509 | None:intergenic | 40.0% | |
| TGACACTTAAAAAGGAACGG+AGG | - | chr7_4:46459491-46459510 | None:intergenic | 40.0% | |
| !!! | GGGTATTTTGGGGTTTTTAC+AGG | + | chr7_4:46459886-46459905 | Msa1157460:intron | 40.0% |
| TGTCCTTCAAGCCATCTTAA+AGG | + | chr7_4:46460168-46460187 | Msa1157460:CDS | 40.0% | |
| !! | GTACCTTTAAGATGGCTTGA+AGG | - | chr7_4:46460174-46460193 | None:intergenic | 40.0% |
| TGTGTGATTCTAACATGGGT+TGG | + | chr7_4:46460423-46460442 | Msa1157460:intron | 40.0% | |
| !!! | ATGGGTTGGTGATTTTTTGG+TGG | + | chr7_4:46460437-46460456 | Msa1157460:intron | 40.0% |
| TTTGAGAAGGAACTCTTTGG+AGG | + | chr7_4:46460504-46460523 | Msa1157460:CDS | 40.0% | |
| TTAATCTTGCTTACAGCTCC+AGG | - | chr7_4:46460601-46460620 | None:intergenic | 40.0% | |
| TGGAGCTGTAAGCAAGATTA+AGG | + | chr7_4:46460600-46460619 | Msa1157460:CDS | 40.0% | |
| TGACAGTAATGTTCCAGAAG+CGG | + | chr7_4:46460782-46460801 | Msa1157460:intron | 40.0% | |
| GTTTACATGCAGCACCTAAT+GGG | + | chr7_4:46460804-46460823 | Msa1157460:CDS | 40.0% | |
| TTTACATGCAGCACCTAATG+GGG | + | chr7_4:46460805-46460824 | Msa1157460:CDS | 40.0% | |
| TGTGCAAGAAATAACAGAGG+CGG | + | chr7_4:46460851-46460870 | Msa1157460:CDS | 40.0% | |
| ATGATGAAGCCAGCAAAGAT+TGG | + | chr7_4:46460882-46460901 | Msa1157460:CDS | 40.0% | |
| TGATGAAGCCAGCAAAGATT+GGG | + | chr7_4:46460883-46460902 | Msa1157460:CDS | 40.0% | |
| AAGAAAAGAAAGCTCCTGCT+GGG | - | chr7_4:46460961-46460980 | None:intergenic | 40.0% | |
| AAAGAAAAGAAAGCTCCTGC+TGG | - | chr7_4:46460962-46460981 | None:intergenic | 40.0% | |
| GGGAACACTGATGATAGTTT+AGG | + | chr7_4:46461044-46461063 | Msa1157460:three_prime_UTR | 40.0% | |
| TCACTTGAGGATGAAGGAAA+TGG | + | chr7_4:46461174-46461193 | Msa1157460:three_prime_UTR | 40.0% | |
| !! | GATTTTCAGGGACAAGATCG+AGG | - | chr7_4:46458525-46458544 | None:intergenic | 45.0% |
| TCAGGTTTGGAGATGAGCAA+TGG | + | chr7_4:46458708-46458727 | Msa1157460:intron | 45.0% | |
| TTGGAGATGAGCAATGGTGA+TGG | + | chr7_4:46458714-46458733 | Msa1157460:CDS | 45.0% | |
| !!! | TGAACTCATGCCGCTTTTTC+TGG | + | chr7_4:46459054-46459073 | Msa1157460:intron | 45.0% |
| !!! | GAACTCATGCCGCTTTTTCT+GGG | + | chr7_4:46459055-46459074 | Msa1157460:intron | 45.0% |
| ! | GGTTTCCTATTTTGCCCCTA+TGG | + | chr7_4:46459076-46459095 | Msa1157460:intron | 45.0% |
| ! | GGGGTTTAAGGGTTTTTCTG+TGG | + | chr7_4:46459119-46459138 | Msa1157460:intron | 45.0% |
| AATGACTGGGCAGTCATCTT+TGG | - | chr7_4:46459320-46459339 | None:intergenic | 45.0% | |
| TTCCTATGGGCTTCAAAGAG+AGG | + | chr7_4:46459958-46459977 | Msa1157460:CDS | 45.0% | |
| ! | CGAACAAGTATTGCTGCATC+AGG | - | chr7_4:46460320-46460339 | None:intergenic | 45.0% |
| CAAAAGGGCGAAAAACTCAC+TGG | - | chr7_4:46460362-46460381 | None:intergenic | 45.0% | |
| !!! | GTTGGTGATTTTTTGGTGGC+AGG | + | chr7_4:46460441-46460460 | Msa1157460:intron | 45.0% |
| !! | GGAGGCTTTGAAACTCAGTT+TGG | + | chr7_4:46460525-46460544 | Msa1157460:CDS | 45.0% |
| GGTTTACATGCAGCACCTAA+TGG | + | chr7_4:46460803-46460822 | Msa1157460:CDS | 45.0% | |
| AGCACCTAATGGGGATTGAT+GGG | + | chr7_4:46460814-46460833 | Msa1157460:CDS | 45.0% | |
| AGAAATAACAGAGGCGGTTG+CGG | + | chr7_4:46460857-46460876 | Msa1157460:CDS | 45.0% | |
| GATGAAGCCAGCAAAGATTG+GGG | + | chr7_4:46460884-46460903 | Msa1157460:CDS | 45.0% | |
| TGAGTTCTTCCCAATCCCTT+CGG | - | chr7_4:46460925-46460944 | None:intergenic | 45.0% | |
| ! | AAAGCCTCAATTTTCCCAGC+AGG | + | chr7_4:46460944-46460963 | Msa1157460:CDS | 45.0% |
| AAGGTGGGAGAGAAACCTTG+GGG | - | chr7_4:46458383-46458402 | None:intergenic | 50.0% | |
| GAAGGTGGGAGAGAAACCTT+GGG | - | chr7_4:46458384-46458403 | None:intergenic | 50.0% | |
| TGAAGGTGGGAGAGAAACCT+TGG | - | chr7_4:46458385-46458404 | None:intergenic | 50.0% | |
| !! | ACGGCTTTGAGAGCCATGTT+AGG | - | chr7_4:46458481-46458500 | None:intergenic | 50.0% |
| AAGATCGAGGGAAGGGACAT+CGG | - | chr7_4:46458512-46458531 | None:intergenic | 50.0% | |
| TACGTACCGCTAGGAAAACG+GGG | - | chr7_4:46458568-46458587 | None:intergenic | 50.0% | |
| GTACGTACCGCTAGGAAAAC+GGG | - | chr7_4:46458569-46458588 | None:intergenic | 50.0% | |
| GGTACGTACCGCTAGGAAAA+CGG | - | chr7_4:46458570-46458589 | None:intergenic | 50.0% | |
| ATGGTATGGTACGTACCGCT+AGG | - | chr7_4:46458577-46458596 | None:intergenic | 50.0% | |
| TACGTTGCAGTTGCATGCAG+AGG | - | chr7_4:46458654-46458673 | None:intergenic | 50.0% | |
| !! | TGCCTCTCTTTGAAGCCCAT+AGG | - | chr7_4:46459963-46459982 | None:intergenic | 50.0% |
| TATGGGCTTCAAAGAGAGGC+AGG | + | chr7_4:46459962-46459981 | Msa1157460:CDS | 50.0% | |
| GCTTCAAAGAGAGGCAGGAA+TGG | + | chr7_4:46459967-46459986 | Msa1157460:CDS | 50.0% | |
| CAAAGAGAGGCAGGAATGGA+AGG | + | chr7_4:46459971-46459990 | Msa1157460:CDS | 50.0% | |
| ! | GAGAAGGAACTCTTTGGAGG+AGG | + | chr7_4:46460507-46460526 | Msa1157460:CDS | 50.0% |
| TGCTGCATGTAAACCGCTTC+TGG | - | chr7_4:46460798-46460817 | None:intergenic | 50.0% | |
| CAGCACCTAATGGGGATTGA+TGG | + | chr7_4:46460813-46460832 | Msa1157460:CDS | 50.0% | |
| GCACCTAATGGGGATTGATG+GGG | + | chr7_4:46460815-46460834 | Msa1157460:CDS | 50.0% | |
| TCACCCCATCAATCCCCATT+AGG | - | chr7_4:46460821-46460840 | None:intergenic | 50.0% | |
| TCTTCCTCCCCAATCTTTGC+TGG | - | chr7_4:46460894-46460913 | None:intergenic | 50.0% | |
| AGCAAAGATTGGGGAGGAAG+AGG | + | chr7_4:46460893-46460912 | Msa1157460:CDS | 50.0% | |
| GCAAAGATTGGGGAGGAAGA+GGG | + | chr7_4:46460894-46460913 | Msa1157460:CDS | 50.0% | |
| AGCTCCTGCTGGGAAAATTG+AGG | - | chr7_4:46460951-46460970 | None:intergenic | 50.0% | |
| CAGGGACAAGATCGAGGGAA+GGG | - | chr7_4:46458519-46458538 | None:intergenic | 55.0% | |
| TCAGGGACAAGATCGAGGGA+AGG | - | chr7_4:46458520-46458539 | None:intergenic | 55.0% | |
| ! | GGGAGAGGGAGGGATTTTCA+GGG | - | chr7_4:46458537-46458556 | None:intergenic | 55.0% |
| ! | AGGGAGAGGGAGGGATTTTC+AGG | - | chr7_4:46458538-46458557 | None:intergenic | 55.0% |
| ACGTACCGCTAGGAAAACGG+GGG | - | chr7_4:46458567-46458586 | None:intergenic | 55.0% | |
| GAAGCCAGCAAAGATTGGGG+AGG | + | chr7_4:46460887-46460906 | Msa1157460:CDS | 55.0% | |
| GATTGGGGAGGAAGAGGGTT+TGG | + | chr7_4:46460899-46460918 | Msa1157460:CDS | 55.0% | |
| AGGAAGAGGGTTTGGCCGAA+GGG | + | chr7_4:46460907-46460926 | Msa1157460:CDS | 55.0% | |
| AGGGTTTGGCCGAAGGGATT+GGG | + | chr7_4:46460913-46460932 | Msa1157460:CDS | 55.0% | |
| AGGGACATCGGAGACGTGGA+CGG | - | chr7_4:46458500-46458519 | None:intergenic | 60.0% | |
| AGGAAAACGGGGGGAGAGGA+GGG | - | chr7_4:46458557-46458576 | None:intergenic | 60.0% | |
| TAGGAAAACGGGGGGAGAGG+AGG | - | chr7_4:46458558-46458577 | None:intergenic | 60.0% | |
| ! | CTCTCCCCCCGTTTTCCTAG+CGG | + | chr7_4:46458559-46458578 | Msa1157460:CDS | 60.0% |
| CGTACCGCTAGGAAAACGGG+GGG | - | chr7_4:46458566-46458585 | None:intergenic | 60.0% | |
| AGATACGCGGCGACCGAAAC+TGG | - | chr7_4:46459030-46459049 | None:intergenic | 60.0% | |
| GAGGAAGAGGGTTTGGCCGA+AGG | + | chr7_4:46460906-46460925 | Msa1157460:CDS | 60.0% | |
| GAGGGTTTGGCCGAAGGGAT+TGG | + | chr7_4:46460912-46460931 | Msa1157460:CDS | 60.0% | |
| GGGAAGGGACATCGGAGACG+TGG | - | chr7_4:46458504-46458523 | None:intergenic | 65.0% | |
| CGCTAGGAAAACGGGGGGAG+AGG | - | chr7_4:46458561-46458580 | None:intergenic | 65.0% | |
| GGGGAGAGGAGGGAGAGGGA+GGG | - | chr7_4:46458547-46458566 | None:intergenic | 70.0% | |
| ACGGGGGGAGAGGAGGGAGA+GGG | - | chr7_4:46458551-46458570 | None:intergenic | 70.0% | |
| AACGGGGGGAGAGGAGGGAG+AGG | - | chr7_4:46458552-46458571 | None:intergenic | 70.0% | |
| GGGGGAGAGGAGGGAGAGGG+AGG | - | chr7_4:46458548-46458567 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 46458349 | 46461227 | 46458349 | ID=Msa1157460;Name=Msa1157460 |
| chr7_4 | mRNA | 46458349 | 46461227 | 46458349 | ID=Msa1157460-mRNA-1;Parent=Msa1157460;Name=Msa1157460-mRNA-1;_AED=0.08;_eAED=0.09;_QI=0|0.8|0.83|1|1|1|6|214|405 |
| chr7_4 | exon | 46458349 | 46458580 | 46458349 | ID=Msa1157460-mRNA-1:exon:12145;Parent=Msa1157460-mRNA-1 |
| chr7_4 | exon | 46458712 | 46458896 | 46458712 | ID=Msa1157460-mRNA-1:exon:12146;Parent=Msa1157460-mRNA-1 |
| chr7_4 | exon | 46459908 | 46460189 | 46459908 | ID=Msa1157460-mRNA-1:exon:12147;Parent=Msa1157460-mRNA-1 |
| chr7_4 | exon | 46460266 | 46460361 | 46460266 | ID=Msa1157460-mRNA-1:exon:12148;Parent=Msa1157460-mRNA-1 |
| chr7_4 | exon | 46460463 | 46460659 | 46460463 | ID=Msa1157460-mRNA-1:exon:12149;Parent=Msa1157460-mRNA-1 |
| chr7_4 | exon | 46460788 | 46461227 | 46460788 | ID=Msa1157460-mRNA-1:exon:12150;Parent=Msa1157460-mRNA-1 |
| chr7_4 | CDS | 46458349 | 46458580 | 46458349 | ID=Msa1157460-mRNA-1:cds;Parent=Msa1157460-mRNA-1 |
| chr7_4 | CDS | 46458712 | 46458896 | 46458712 | ID=Msa1157460-mRNA-1:cds;Parent=Msa1157460-mRNA-1 |
| chr7_4 | CDS | 46459908 | 46460189 | 46459908 | ID=Msa1157460-mRNA-1:cds;Parent=Msa1157460-mRNA-1 |
| chr7_4 | CDS | 46460266 | 46460361 | 46460266 | ID=Msa1157460-mRNA-1:cds;Parent=Msa1157460-mRNA-1 |
| chr7_4 | CDS | 46460463 | 46460659 | 46460463 | ID=Msa1157460-mRNA-1:cds;Parent=Msa1157460-mRNA-1 |
| chr7_4 | CDS | 46460788 | 46461013 | 46460788 | ID=Msa1157460-mRNA-1:cds;Parent=Msa1157460-mRNA-1 |
| chr7_4 | three_prime_UTR | 46461014 | 46461227 | 46461014 | ID=Msa1157460-mRNA-1:three_prime_utr;Parent=Msa1157460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
