Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159750 | XP_039689705.1 | 63.563 | 494 | 146 | 6 | 3 | 489 | 5 | 471 | 0.0 | 606 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159750 | G7KSM4 | 73.295 | 528 | 105 | 7 | 2 | 519 | 4 | 505 | 0.0 | 750 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1122040 | Msa1159750 | 0.827061 | 1.925612e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159750 | MtrunA17_Chr7g0257121 | 87.745 | 204 | 24 | 1 | 2 | 204 | 4 | 207 | 6.67e-128 | 375 |
| Msa1159750 | MtrunA17_Chr7g0257131 | 73.134 | 268 | 61 | 4 | 261 | 519 | 1 | 266 | 1.25e-124 | 375 |
| Msa1159750 | MtrunA17_Chr1g0159631 | 68.401 | 269 | 68 | 5 | 228 | 489 | 2 | 260 | 1.22e-110 | 351 |
| Msa1159750 | MtrunA17_Chr1g0159641 | 68.627 | 204 | 63 | 1 | 3 | 206 | 5 | 207 | 4.48e-94 | 290 |
| Msa1159750 | MtrunA17_Chr7g0257141 | 68.966 | 58 | 16 | 1 | 443 | 498 | 4 | 61 | 2.92e-18 | 84.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1159750 | AT1G77320.1 | 44.358 | 514 | 246 | 6 | 2 | 510 | 4 | 482 | 1.61e-131 | 410 |
| Msa1159750 | AT1G77320.3 | 44.358 | 514 | 246 | 6 | 2 | 510 | 4 | 482 | 4.31e-131 | 409 |
| Msa1159750 | AT1G77320.2 | 43.191 | 514 | 235 | 8 | 2 | 510 | 4 | 465 | 1.97e-122 | 385 |
Find 146 sgRNAs with CRISPR-Local
Find 386 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGTGCATCACAACACATTT+TGG | 0.197165 | 7_4:+49440557 | None:intergenic |
| CATGTAACTCTTTCAGATTC+TGG | 0.208703 | 7_4:+49440681 | None:intergenic |
| TATAAGGTTCTTCCGTTCTC+TGG | 0.223069 | 7_4:-49444151 | Msa1159750:CDS |
| AATTCCTTGCTGGTCTTTAA+TGG | 0.233301 | 7_4:+49442387 | None:intergenic |
| CATAGTCAGGAAAAGGATAT+TGG | 0.280059 | 7_4:-49442558 | Msa1159750:CDS |
| ATCATGATAGCACACCTTTA+GGG | 0.299500 | 7_4:+49441805 | None:intergenic |
| GCAAGGAATTGAACTTTGAT+AGG | 0.303595 | 7_4:-49442374 | Msa1159750:CDS |
| ACCAATCATCTTGCAGCCTT+TGG | 0.305539 | 7_4:+49447036 | None:intergenic |
| CTTCACTTGCTGCTTAACTA+TGG | 0.310136 | 7_4:-49445368 | Msa1159750:CDS |
| AACCATTCATAAGTAACTAT+TGG | 0.328810 | 7_4:+49444217 | None:intergenic |
| GTCTTCTATTGCACTGCCTT+AGG | 0.330077 | 7_4:-49443103 | Msa1159750:CDS |
| AAGTAACTATTGGTTTCTTC+AGG | 0.331549 | 7_4:+49444227 | None:intergenic |
| TCATTCTCACAATACTAATA+TGG | 0.333267 | 7_4:+49442876 | None:intergenic |
| AATGAATTAATGAGTGAAAT+GGG | 0.343508 | 7_4:-49445003 | Msa1159750:CDS |
| ACATGGTTATCTGATCATTC+TGG | 0.345390 | 7_4:-49440663 | Msa1159750:CDS |
| TCACTGATTGTAAGTACATA+AGG | 0.355598 | 7_4:+49443070 | None:intergenic |
| ATCAAAGTTCAATTCCTTGC+TGG | 0.364015 | 7_4:+49442377 | None:intergenic |
| TCTTCTATTGCACTGCCTTA+GGG | 0.366676 | 7_4:-49443102 | Msa1159750:CDS |
| CTACATTGTTCTTTGCCTCT+CGG | 0.370564 | 7_4:+49441636 | None:intergenic |
| GATAAAGATCCACTCTGAAC+AGG | 0.374142 | 7_4:+49442615 | None:intergenic |
| TCTGAAAGGGATAAGCTAAT+TGG | 0.375829 | 7_4:-49442270 | Msa1159750:CDS |
| GTATAAGATGGCAAAACATT+GGG | 0.376549 | 7_4:-49442900 | Msa1159750:CDS |
| TGTTCCACAAGAGTCATATA+AGG | 0.376888 | 7_4:-49444167 | Msa1159750:CDS |
| AAATGAATTAATGAGTGAAA+TGG | 0.379958 | 7_4:-49445004 | Msa1159750:CDS |
| ATACTCGCATGTGGCTTTGA+TGG | 0.389711 | 7_4:-49445334 | Msa1159750:CDS |
| GACTGCAGAATATCACTTGT+TGG | 0.390318 | 7_4:-49442303 | Msa1159750:CDS |
| GTTGTCCGATTCAGAATCAT+TGG | 0.396259 | 7_4:+49442344 | None:intergenic |
| TGCGGCTCTTGAGGATGAAC+CGG | 0.415535 | 7_4:+49442524 | None:intergenic |
| CATTGTTACTTAGAAAATAT+AGG | 0.428906 | 7_4:-49440481 | Msa1159750:three_prime_UTR |
| ATAGTCAGGAAAAGGATATT+GGG | 0.430713 | 7_4:-49442557 | Msa1159750:CDS |
| CACTGATTGTAAGTACATAA+GGG | 0.435786 | 7_4:+49443071 | None:intergenic |
| ATCATTTAAAGACAAGCATT+CGG | 0.437953 | 7_4:+49442224 | None:intergenic |
| AACCAATAGTTACTTATGAA+TGG | 0.439724 | 7_4:-49444219 | Msa1159750:CDS |
| CTCAACAGCGCAACATAGTC+AGG | 0.447483 | 7_4:-49442571 | Msa1159750:CDS |
| TCCAAAGGCTGCAAGATGAT+TGG | 0.448394 | 7_4:-49447037 | Msa1159750:intron |
| TCTAAATTCACCTACAACCT+GGG | 0.450740 | 7_4:-49441267 | Msa1159750:CDS |
| TTCTGCAGTCTGCTAAATAC+TGG | 0.451669 | 7_4:+49442316 | None:intergenic |
| GTTCTTAAATTCAGGTAACT+TGG | 0.455114 | 7_4:-49441672 | Msa1159750:intron |
| CGTCTCAGCCAATGAGGATC+TGG | 0.456439 | 7_4:+49441242 | None:intergenic |
| AGAAATGACGTACGTGTTGA+CGG | 0.457579 | 7_4:+49447165 | None:intergenic |
| GGATCTGGACCCCAGGTTGT+AGG | 0.457736 | 7_4:+49441257 | None:intergenic |
| GACTGTGTAGCATCTGGGAC+TGG | 0.460422 | 7_4:+49442456 | None:intergenic |
| CCTGGGGTCCAGATCCTCAT+TGG | 0.464512 | 7_4:-49441250 | Msa1159750:CDS |
| TATAGTCGCACGGAAGAGAT+TGG | 0.478212 | 7_4:-49441448 | Msa1159750:CDS |
| TGGATCTTCATTTAAAGACT+TGG | 0.481516 | 7_4:+49442476 | None:intergenic |
| ATGTACCAGACCTTGTACTC+TGG | 0.483178 | 7_4:+49444916 | None:intergenic |
| CAAGGAATTGAACTTTGATA+GGG | 0.486929 | 7_4:-49442373 | Msa1159750:CDS |
| TAGTTAATTTACAACCTGCT+TGG | 0.488008 | 7_4:+49444104 | None:intergenic |
| ATAAGGTTCTTCCGTTCTCT+GGG | 0.489433 | 7_4:-49444150 | Msa1159750:CDS |
| AGATTCTGGATCTGATTCAC+TGG | 0.489673 | 7_4:+49440695 | None:intergenic |
| TTGGTATGGTGCGTAAAGGT+GGG | 0.490499 | 7_4:-49442251 | Msa1159750:CDS |
| ATTTGAATCTGCGGCTCTTG+AGG | 0.495817 | 7_4:+49442515 | None:intergenic |
| AGCAAGTGAAGGTTTGTGTA+GGG | 0.500205 | 7_4:+49445380 | None:intergenic |
| AGTATAAGATGGCAAAACAT+TGG | 0.501783 | 7_4:-49442901 | Msa1159750:CDS |
| AGGATTCAAAATCAAAATCA+AGG | 0.505681 | 7_4:-49440621 | Msa1159750:CDS |
| ACTTCTCGAGATCGAAGAGC+GGG | 0.507285 | 7_4:-49440732 | Msa1159750:CDS |
| ATTGAACTTTGATAGGGTTG+TGG | 0.508522 | 7_4:-49442367 | Msa1159750:CDS |
| AACTAGCTTATTTGAATCTG+CGG | 0.509713 | 7_4:+49442506 | None:intergenic |
| TGATTCACTGGAAGCTGCAT+AGG | 0.509987 | 7_4:+49440707 | None:intergenic |
| AGATGTCGAAGTTATTTGAC+GGG | 0.512379 | 7_4:-49447331 | Msa1159750:CDS |
| AAGTTGACACACATAGTAGT+TGG | 0.513618 | 7_4:-49442201 | Msa1159750:CDS |
| CGTCGTTTCTTAGAAAACAT+AGG | 0.514179 | 7_4:-49440441 | Msa1159750:three_prime_UTR |
| ATCTAAATTCACCTACAACC+TGG | 0.514187 | 7_4:-49441268 | Msa1159750:CDS |
| AGAGGGTTGAGTTTCACTGC+TGG | 0.518075 | 7_4:+49440595 | None:intergenic |
| GGGTTAAAGATCTGTGTGAC+TGG | 0.518889 | 7_4:-49444130 | Msa1159750:CDS |
| TGTGGCCAATGATTCTGAAT+CGG | 0.523262 | 7_4:-49442349 | Msa1159750:CDS |
| TATCTTCACGTAAGGTGACT+AGG | 0.523702 | 7_4:-49442596 | Msa1159750:CDS |
| AGTGTTTCCTGTCGTGATCA+AGG | 0.525978 | 7_4:-49441417 | Msa1159750:intron |
| ATTGGTATGGTGCGTAAAGG+TGG | 0.526488 | 7_4:-49442252 | Msa1159750:CDS |
| TCCAGTCCTCGATGTTAAAG+AGG | 0.527044 | 7_4:-49442427 | Msa1159750:CDS |
| AGCGCAACATAGTCAGGAAA+AGG | 0.530252 | 7_4:-49442565 | Msa1159750:CDS |
| AGTTGACACACATAGTAGTT+GGG | 0.532390 | 7_4:-49442200 | Msa1159750:CDS |
| TCCTTGCTGGTCTTTAATGG+AGG | 0.538133 | 7_4:+49442390 | None:intergenic |
| GTTCTTCAATGTGCTAAAGA+AGG | 0.540178 | 7_4:-49445412 | Msa1159750:CDS |
| CAAGTGAAGGTTTGTGTAGG+GGG | 0.540423 | 7_4:+49445382 | None:intergenic |
| CACTTGCTGCTTAACTATGG+AGG | 0.540521 | 7_4:-49445365 | Msa1159750:CDS |
| TTGGATAGCATGTCTGAATG+AGG | 0.541648 | 7_4:-49442646 | Msa1159750:intron |
| GACTGTTCTTACGCTGCTGA+AGG | 0.542724 | 7_4:-49442929 | Msa1159750:CDS |
| ATGAATTAATGAGTGAAATG+GGG | 0.545353 | 7_4:-49445002 | Msa1159750:CDS |
| CAGATCCTCATTGGCTGAGA+CGG | 0.546327 | 7_4:-49441241 | Msa1159750:CDS |
| CATATTACCTTGATCACGAC+AGG | 0.546457 | 7_4:+49441410 | None:intergenic |
| AAGATGTCGAAGTTATTTGA+CGG | 0.546558 | 7_4:-49447332 | Msa1159750:CDS |
| TGGATCTTTATCTTCACGTA+AGG | 0.548339 | 7_4:-49442604 | Msa1159750:CDS |
| GGATTTGATCTTTCCCGCAA+CGG | 0.550469 | 7_4:-49447215 | Msa1159750:CDS |
| GCCTCTTTAACATCGAGGAC+TGG | 0.550497 | 7_4:+49442426 | None:intergenic |
| GATACTGAAGTTGAAAATGA+TGG | 0.550714 | 7_4:-49441614 | Msa1159750:CDS |
| CAGCAAGTGAAGGTTTGTGT+AGG | 0.552725 | 7_4:+49445379 | None:intergenic |
| GGTATGGTGCGTAAAGGTGG+GGG | 0.553283 | 7_4:-49442249 | Msa1159750:CDS |
| GAATAGACTTACATTTCTGT+CGG | 0.553737 | 7_4:+49442174 | None:intergenic |
| GATGAATCTATTGCTCAAAG+AGG | 0.554272 | 7_4:-49442845 | Msa1159750:intron |
| CTAATTGGTATGGTGCGTAA+AGG | 0.554609 | 7_4:-49442255 | Msa1159750:CDS |
| ATTACGCTGTTAAAACCTCA+TGG | 0.555104 | 7_4:-49441899 | Msa1159750:CDS |
| GGTGCACATTCGTTCGCAGA+GGG | 0.555729 | 7_4:+49440578 | None:intergenic |
| ATTCACCAGGTGGAAATAAG+TGG | 0.556146 | 7_4:+49447288 | None:intergenic |
| AACGGCGGTCAAGTTCATAT+CGG | 0.557528 | 7_4:-49447236 | Msa1159750:CDS |
| AAGGGATAAGCTAATTGGTA+TGG | 0.558062 | 7_4:-49442265 | Msa1159750:CDS |
| TGAAGGTGATAAGTATAAGA+TGG | 0.560642 | 7_4:-49442912 | Msa1159750:CDS |
| CCAATGAGGATCTGGACCCC+AGG | 0.561314 | 7_4:+49441250 | None:intergenic |
| TGGGATATAGTGAGAACTGT+TGG | 0.564814 | 7_4:-49441933 | Msa1159750:CDS |
| GATATTGGGATAATGCAATC+CGG | 0.568990 | 7_4:-49442543 | Msa1159750:CDS |
| TGGTATGGTGCGTAAAGGTG+GGG | 0.569876 | 7_4:-49442250 | Msa1159750:CDS |
| TGAATTAATGAGTGAAATGG+GGG | 0.576578 | 7_4:-49445001 | Msa1159750:CDS |
| TGTTAAAACCTCATGGCTTG+AGG | 0.578771 | 7_4:-49441892 | Msa1159750:CDS |
| GATACGATATGTATCTGATA+CGG | 0.580941 | 7_4:-49440517 | Msa1159750:three_prime_UTR |
| TGAATTTGACACTGTTCTCA+AGG | 0.582933 | 7_4:-49447270 | Msa1159750:CDS |
| AAGGCAGTGCAATAGAAGAC+AGG | 0.583532 | 7_4:+49443106 | None:intergenic |
| TTCAATGTGCTAAAGAAGGA+AGG | 0.584964 | 7_4:-49445408 | Msa1159750:CDS |
| CTCAAGGTCGTTGAAGAGAA+CGG | 0.585369 | 7_4:-49447254 | Msa1159750:CDS |
| TACTCATTGTTCAGTCATTG+TGG | 0.586971 | 7_4:-49441297 | Msa1159750:intron |
| CATAGTTAAGCAGCAAGTGA+AGG | 0.588376 | 7_4:+49445369 | None:intergenic |
| GAAGGGATGCGCTTCTAGAG+AGG | 0.592314 | 7_4:-49440641 | Msa1159750:CDS |
| CAGAATCTGAAAGAGTTACA+TGG | 0.592521 | 7_4:-49440680 | Msa1159750:CDS |
| GGTTATCTGATCATTCTGGA+AGG | 0.592927 | 7_4:-49440659 | Msa1159750:CDS |
| TCGCGCCACTTATTTCCACC+TGG | 0.597465 | 7_4:-49447293 | Msa1159750:CDS |
| TGCTTTAATTCATACCCTAG+TGG | 0.599380 | 7_4:-49441579 | Msa1159750:intron |
| ATAAGGGATACTAATCCCTA+AGG | 0.600002 | 7_4:+49443087 | None:intergenic |
| AGAACCTTATATGACTCTTG+TGG | 0.604681 | 7_4:+49444163 | None:intergenic |
| TGTGTGACTGGAATCCAAGC+AGG | 0.611137 | 7_4:-49444118 | Msa1159750:intron |
| TTTAAAGATCTAAAATCCAA+AGG | 0.618984 | 7_4:-49447052 | Msa1159750:CDS |
| GTTATCTGATCATTCTGGAA+GGG | 0.619930 | 7_4:-49440658 | Msa1159750:CDS |
| TGGTGCACATTCGTTCGCAG+AGG | 0.621836 | 7_4:+49440577 | None:intergenic |
| ATAAAGATCCACTCTGAACA+GGG | 0.625634 | 7_4:+49442616 | None:intergenic |
| GCAAGTGAAGGTTTGTGTAG+GGG | 0.625744 | 7_4:+49445381 | None:intergenic |
| GTCTAAATAAAGTACCACTA+GGG | 0.626378 | 7_4:+49441565 | None:intergenic |
| ATAGTGAGAACTGTTGGTCA+AGG | 0.627865 | 7_4:-49441927 | Msa1159750:CDS |
| AGATCCACTCTGAACAGGGT+AGG | 0.631294 | 7_4:+49442620 | None:intergenic |
| CAGATCTTTAACCCAGAGAA+CGG | 0.632179 | 7_4:+49444139 | None:intergenic |
| GACTTCTCGAGATCGAAGAG+CGG | 0.633085 | 7_4:-49440733 | Msa1159750:CDS |
| ATGTGTTGTGATGCACGGAT+AGG | 0.633598 | 7_4:-49440552 | Msa1159750:three_prime_UTR |
| AGAACAGTGTCAAATTCACC+AGG | 0.638707 | 7_4:+49447275 | None:intergenic |
| TGGCTTTGATGGAGATCAGA+TGG | 0.642454 | 7_4:-49445323 | Msa1159750:intron |
| TATAAGATGGCAAAACATTG+GGG | 0.643219 | 7_4:-49442899 | Msa1159750:CDS |
| TCTATCCGTCTCAGCCAATG+AGG | 0.644690 | 7_4:+49441236 | None:intergenic |
| CCAAAATGTGTTGTGATGCA+CGG | 0.649215 | 7_4:-49440557 | Msa1159750:three_prime_UTR |
| GAGTCCTACCCTGTTCAGAG+TGG | 0.662340 | 7_4:-49442624 | Msa1159750:CDS |
| GCTGTCAAAATACTCGCATG+TGG | 0.667280 | 7_4:-49445343 | Msa1159750:CDS |
| CTAAATTCACCTACAACCTG+GGG | 0.673060 | 7_4:-49441266 | Msa1159750:CDS |
| TTAGTATTGTGAGAATGACA+TGG | 0.675007 | 7_4:-49442871 | Msa1159750:CDS |
| ACCTCCATTAAAGACCAGCA+AGG | 0.676859 | 7_4:-49442391 | Msa1159750:CDS |
| ACGGATGTGATATAGTCGCA+CGG | 0.691957 | 7_4:-49441458 | Msa1159750:CDS |
| GTCACAGTCCTCAAGCCATG+AGG | 0.701883 | 7_4:+49441884 | None:intergenic |
| ACAGTGTCAAATTCACCAGG+TGG | 0.715868 | 7_4:+49447278 | None:intergenic |
| CATCTGCCTCTTTAACATCG+AGG | 0.735221 | 7_4:+49442421 | None:intergenic |
| GAATTAATGAGTGAAATGGG+GGG | 0.743537 | 7_4:-49445000 | Msa1159750:CDS |
| GGTCACTACTCAAGACCGAG+AGG | 0.747480 | 7_4:-49441651 | Msa1159750:CDS |
| AAGGTCGTTGAAGAGAACGG+CGG | 0.779502 | 7_4:-49447251 | Msa1159750:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATATAAGTATACTATAA+AGG | + | chr7_4:49446423-49446442 | None:intergenic | 10.0% |
| !!! | AACATGATAAATTTTAAATA+AGG | + | chr7_4:49446729-49446748 | None:intergenic | 10.0% |
| !! | TATTTGATAGAATTATCAAA+AGG | + | chr7_4:49443825-49443844 | None:intergenic | 15.0% |
| !! | TTAATCATAAATATTGGAAA+AGG | + | chr7_4:49445758-49445777 | None:intergenic | 15.0% |
| !! | AGAAGATTAATCATAAATAT+TGG | + | chr7_4:49445764-49445783 | None:intergenic | 15.0% |
| !! | AAAAAAGTTTCAAAAATTAG+TGG | + | chr7_4:49446549-49446568 | None:intergenic | 15.0% |
| !! | TTTATAGTACAAATGTTAAT+TGG | - | chr7_4:49446569-49446588 | Msa1159750:intron | 15.0% |
| !! | CAATTTACATTACAATATAA+AGG | - | chr7_4:49446601-49446620 | Msa1159750:intron | 15.0% |
| !!! | TTTAAAGATCTAAAATCCAA+AGG | - | chr7_4:49440693-49440712 | Msa1159750:CDS | 20.0% |
| !!! | TCATTTTCTCGAATAATTAA+CGG | + | chr7_4:49440761-49440780 | None:intergenic | 20.0% |
| !!! | TCATTTTCTCGAATAATTAA+CGG | + | chr7_4:49440761-49440780 | None:intergenic | 20.0% |
| !!! | TCATTTTCTCGAATAATTAA+CGG | + | chr7_4:49440761-49440780 | None:intergenic | 20.0% |
| !!! | TCATTTTCTCGAATAATTAA+CGG | + | chr7_4:49440761-49440780 | None:intergenic | 20.0% |
| !!! | TATATATGTTAGTGTTGTTT+AGG | - | chr7_4:49441138-49441157 | Msa1159750:intron | 20.0% |
| !!! | TCATTTTCTCGAATAATTAA+CGG | + | chr7_4:49440761-49440780 | None:intergenic | 20.0% |
| !!! | TCATTTTCTCGAATAATTAA+CGG | + | chr7_4:49440761-49440780 | None:intergenic | 20.0% |
| !!! | TCATTTTCTCGAATAATTAA+CGG | + | chr7_4:49440761-49440780 | None:intergenic | 20.0% |
| !!! | TCATTTTCTGGAATAATTAA+CGG | + | chr7_4:49441578-49441597 | None:intergenic | 20.0% |
| !!! | TACTCAATTATTTCATTTTC+TGG | + | chr7_4:49440773-49440792 | None:intergenic | 20.0% |
| !!! | TCATTTTCTCGAATAATTAA+CGG | + | chr7_4:49440761-49440780 | None:intergenic | 20.0% |
| !!! | ATAGATTTTTTGTTTTAGAC+TGG | - | chr7_4:49442153-49442172 | Msa1159750:intron | 20.0% |
| !! | TAATAAAAGAAACAAAACTG+AGG | + | chr7_4:49442294-49442313 | None:intergenic | 20.0% |
| !!! | TGTTTCTTTTATTATTGAGT+AGG | - | chr7_4:49442300-49442319 | Msa1159750:CDS | 20.0% |
| !!! | TTAAACCTTAGAATTTTAGA+GGG | + | chr7_4:49442617-49442636 | None:intergenic | 20.0% |
| !!! | AGTTATCTGTTATTTTTTCT+TGG | - | chr7_4:49442636-49442655 | Msa1159750:CDS | 20.0% |
| !! | AAATGAATTAATGAGTGAAA+TGG | - | chr7_4:49442741-49442760 | Msa1159750:intron | 20.0% |
| !! | AATGAATTAATGAGTGAAAT+GGG | - | chr7_4:49442742-49442761 | Msa1159750:intron | 20.0% |
| !!! | TGTCATTATGAAAAATGTTT+TGG | - | chr7_4:49442804-49442823 | Msa1159750:intron | 20.0% |
| !! | AAAAACAAAAACAAAAGTGA+AGG | + | chr7_4:49443186-49443205 | None:intergenic | 20.0% |
| !! | ACAACTTTGATATTTACAAT+AGG | + | chr7_4:49443362-49443381 | None:intergenic | 20.0% |
| !! | GTAAATTAACTAATAGACAT+TGG | - | chr7_4:49443652-49443671 | Msa1159750:intron | 20.0% |
| !!! | GAAAAGCTTATTTTACAAAA+TGG | - | chr7_4:49443743-49443762 | Msa1159750:intron | 20.0% |
| !!! | ATTCATTTTTACAAGAATTC+AGG | - | chr7_4:49444127-49444146 | Msa1159750:CDS | 20.0% |
| !!! | CAATATTCAACTATTTGTTA+TGG | - | chr7_4:49444179-49444198 | Msa1159750:CDS | 20.0% |
| !!! | AATCTTTTTTCTACATTAGT+TGG | - | chr7_4:49444522-49444541 | Msa1159750:intron | 20.0% |
| !! | GTAAAGAAATGAAAGAATAA+TGG | + | chr7_4:49445011-49445030 | None:intergenic | 20.0% |
| !!! | GAATTTATTTGTTAGTTTTC+TGG | - | chr7_4:49445653-49445672 | Msa1159750:intron | 20.0% |
| !! | TAAATATTGGAAAAGGAATA+TGG | + | chr7_4:49445751-49445770 | None:intergenic | 20.0% |
| !!! | TACTTTTTGGTTAATCTATT+GGG | - | chr7_4:49445990-49446009 | Msa1159750:intron | 20.0% |
| !!! | TTTTCTAAGTTCTTAAATTC+AGG | - | chr7_4:49446065-49446084 | Msa1159750:intron | 20.0% |
| !! | TAAGAATAATTCAGAAAAAG+TGG | + | chr7_4:49446233-49446252 | None:intergenic | 20.0% |
| !! | TTTACATTACAATATAAAGG+AGG | - | chr7_4:49446604-49446623 | Msa1159750:intron | 20.0% |
| !!! | AAATTTTAAATAAGGAAGCA+TGG | + | chr7_4:49446721-49446740 | None:intergenic | 20.0% |
| !! | TAAAATTTATCATGTTTACC+AGG | - | chr7_4:49446733-49446752 | Msa1159750:intron | 20.0% |
| !!! | CATTGTTACTTAGAAAATAT+AGG | - | chr7_4:49447264-49447283 | Msa1159750:CDS | 20.0% |
| ! | AATAATTAACGGTATCAGTA+TGG | + | chr7_4:49440750-49440769 | None:intergenic | 25.0% |
| !!! | AGTATATGTTAGTGTTGTTT+AGG | - | chr7_4:49440789-49440808 | Msa1159750:intron | 25.0% |
| ! | AATAATTAACGGTATCAGTA+TGG | + | chr7_4:49440750-49440769 | None:intergenic | 25.0% |
| !!! | AGTATATGTTAGTGTTGTTT+AGG | - | chr7_4:49440789-49440808 | Msa1159750:intron | 25.0% |
| ! | AATAATTAACGGTATCAGTA+TGG | + | chr7_4:49440750-49440769 | None:intergenic | 25.0% |
| !!! | AGTATATGTTAGTGTTGTTT+AGG | - | chr7_4:49440789-49440808 | Msa1159750:intron | 25.0% |
| !!! | AGTATATGTTAGTGTTGTTT+AGG | - | chr7_4:49440789-49440808 | Msa1159750:intron | 25.0% |
| ! | AATAATTAACGGTATCAGTA+TGG | + | chr7_4:49440750-49440769 | None:intergenic | 25.0% |
| !!! | AGTATATGTTAGTGTTGTTT+AGG | - | chr7_4:49440789-49440808 | Msa1159750:intron | 25.0% |
| !!! | AGTATATGTTAGTGTTGTTT+AGG | - | chr7_4:49440789-49440808 | Msa1159750:intron | 25.0% |
| ! | AATAATTAACGGTATCAGTA+TGG | + | chr7_4:49440750-49440769 | None:intergenic | 25.0% |
| !!! | AGTATATGTTAGTGTTGTTT+AGG | - | chr7_4:49440789-49440808 | Msa1159750:intron | 25.0% |
| ! | AATAATTAACGGTATCAGTA+TGG | + | chr7_4:49440750-49440769 | None:intergenic | 25.0% |
| !!! | AGTATATGTTAGTGTTGTTT+AGG | - | chr7_4:49440789-49440808 | Msa1159750:intron | 25.0% |
| ! | AATAATTAACGGTATCAGTA+TGG | + | chr7_4:49440750-49440769 | None:intergenic | 25.0% |
| ! | TCATTCTCTCGAATAATTAA+CGG | + | chr7_4:49441819-49441838 | None:intergenic | 25.0% |
| !!! | AGTATATGTTAGTGTTGTTT+AGG | - | chr7_4:49440789-49440808 | Msa1159750:intron | 25.0% |
| ! | ATCATGTGTTAGTATTGTTT+AGG | - | chr7_4:49441972-49441991 | Msa1159750:intron | 25.0% |
| !! | CTTAAACCTTAGAATTTTAG+AGG | + | chr7_4:49442618-49442637 | None:intergenic | 25.0% |
| ! | ATTGAGAACAAATATAGGAA+GGG | + | chr7_4:49442681-49442700 | None:intergenic | 25.0% |
| ! | AATTGAGAACAAATATAGGA+AGG | + | chr7_4:49442682-49442701 | None:intergenic | 25.0% |
| ! | TTCCTATATTTGTTCTCAAT+TGG | - | chr7_4:49442681-49442700 | Msa1159750:intron | 25.0% |
| ! | TTCCAATTGAGAACAAATAT+AGG | + | chr7_4:49442686-49442705 | None:intergenic | 25.0% |
| ! | ATGAATTAATGAGTGAAATG+GGG | - | chr7_4:49442743-49442762 | Msa1159750:intron | 25.0% |
| ! | GATAAATAATGCAACAATAG+TGG | - | chr7_4:49443102-49443121 | Msa1159750:CDS | 25.0% |
| !!! | CTTTTGTTTTTGTTTTTGCT+TGG | - | chr7_4:49443189-49443208 | Msa1159750:intron | 25.0% |
| ! | TAGGAAGATGAATTTATTAG+TGG | + | chr7_4:49443343-49443362 | None:intergenic | 25.0% |
| ! | ATCAAAATCTGATCAAAGAT+TGG | + | chr7_4:49443430-49443449 | None:intergenic | 25.0% |
| ! | AACCAATAGTTACTTATGAA+TGG | - | chr7_4:49443526-49443545 | Msa1159750:intron | 25.0% |
| ! | AACCATTCATAAGTAACTAT+TGG | + | chr7_4:49443531-49443550 | None:intergenic | 25.0% |
| !!! | AAGCTTATTTTACAAAATGG+TGG | - | chr7_4:49443746-49443765 | Msa1159750:intron | 25.0% |
| !! | AGGAAAAGTTGAATATTTTC+AGG | + | chr7_4:49443865-49443884 | None:intergenic | 25.0% |
| ! | GGAAAAAATGGTATAAATCA+AGG | + | chr7_4:49443910-49443929 | None:intergenic | 25.0% |
| ! | ATTATCATTTGTGCAAGATA+AGG | + | chr7_4:49444043-49444062 | None:intergenic | 25.0% |
| !!! | GATTTAATTTTTTCCACACT+AGG | - | chr7_4:49444271-49444290 | Msa1159750:intron | 25.0% |
| !! | ATTTTAAACTGGTAAGAACT+AGG | - | chr7_4:49444347-49444366 | Msa1159750:intron | 25.0% |
| ! | AATTAATTATTCAGTCAGAG+AGG | + | chr7_4:49444740-49444759 | None:intergenic | 25.0% |
| ! | AATTCAAAGATCTGTTATTG+AGG | - | chr7_4:49444765-49444784 | Msa1159750:intron | 25.0% |
| ! | TCATTCTCACAATACTAATA+TGG | + | chr7_4:49444872-49444891 | None:intergenic | 25.0% |
| ! | ATCATTTAAAGACAAGCATT+CGG | + | chr7_4:49445524-49445543 | None:intergenic | 25.0% |
| !!! | TATTTTTGAAACTAACATCC+AGG | + | chr7_4:49445699-49445718 | None:intergenic | 25.0% |
| !! | GGATGTTAGTTTCAAAAATA+TGG | - | chr7_4:49445699-49445718 | Msa1159750:intron | 25.0% |
| ! | TCAAAAATATGGCTTTCTTA+TGG | - | chr7_4:49445710-49445729 | Msa1159750:intron | 25.0% |
| ! | GCTTTCTTATGGATTTAATT+TGG | - | chr7_4:49445721-49445740 | Msa1159750:intron | 25.0% |
| !!! | ATTTGTATTTTTACAGGGAA+AGG | - | chr7_4:49445789-49445808 | Msa1159750:intron | 25.0% |
| !!! | CTACTTTTTGGTTAATCTAT+TGG | - | chr7_4:49445989-49446008 | Msa1159750:intron | 25.0% |
| !!! | CTTTTTTCTTCTTATCTCAA+AGG | - | chr7_4:49446264-49446283 | Msa1159750:intron | 25.0% |
| ! | ATAGTACAAATGTTAATTGG+AGG | - | chr7_4:49446572-49446591 | Msa1159750:intron | 25.0% |
| ! | TTTGAGTAGCTAATAATGTT+TGG | - | chr7_4:49446774-49446793 | Msa1159750:intron | 25.0% |
| !!! | AATATCTCTTTGAAACAAAC+CGG | + | chr7_4:49446817-49446836 | None:intergenic | 25.0% |
| ! | GTTTGTTTCAAAGAGATATT+TGG | - | chr7_4:49446817-49446836 | Msa1159750:intron | 25.0% |
| !!! | ATACTGATCTTATGCTTTTT+AGG | - | chr7_4:49446981-49447000 | Msa1159750:intron | 25.0% |
| !!! | TACTGATCTTATGCTTTTTA+GGG | - | chr7_4:49446982-49447001 | Msa1159750:intron | 25.0% |
| ! | AGGATTCAAAATCAAAATCA+AGG | - | chr7_4:49447124-49447143 | Msa1159750:intron | 25.0% |
| AAGATGTCGAAGTTATTTGA+CGG | - | chr7_4:49440413-49440432 | Msa1159750:three_prime_UTR | 30.0% | |
| CTTAACTAACAATGCATACA+CGG | + | chr7_4:49440818-49440837 | None:intergenic | 30.0% | |
| CTTAACTAACAATGCATACA+CGG | + | chr7_4:49440818-49440837 | None:intergenic | 30.0% | |
| CTTAACTAACAATGCATACA+CGG | + | chr7_4:49440818-49440837 | None:intergenic | 30.0% | |
| AATAATTAACGGTATCAGCA+TGG | + | chr7_4:49441446-49441465 | None:intergenic | 30.0% | |
| CTTAACTAACAATGCATACA+CGG | + | chr7_4:49440818-49440837 | None:intergenic | 30.0% | |
| CTTAACTAACAATGCATACA+CGG | + | chr7_4:49440818-49440837 | None:intergenic | 30.0% | |
| CTTAACTAACAATGCATACA+CGG | + | chr7_4:49440818-49440837 | None:intergenic | 30.0% | |
| CTTTAAATGTGTCTGTATCA+TGG | + | chr7_4:49442075-49442094 | None:intergenic | 30.0% | |
| ! | AATTAGAGCGTTTAGGTTTA+AGG | - | chr7_4:49442178-49442197 | Msa1159750:intron | 30.0% |
| ATGTAACTGCACATGTATAT+AGG | + | chr7_4:49442242-49442261 | None:intergenic | 30.0% | |
| AAAAAGCAACTTGCGAATAT+TGG | + | chr7_4:49442473-49442492 | None:intergenic | 30.0% | |
| !! | CTTAGAATTTTAGAGGGTTT+TGG | + | chr7_4:49442611-49442630 | None:intergenic | 30.0% |
| !! | CAAAACCCTCTAAAATTCTA+AGG | - | chr7_4:49442609-49442628 | Msa1159750:CDS | 30.0% |
| ATTCATTTATCTTAACCTGC+AGG | + | chr7_4:49442729-49442748 | None:intergenic | 30.0% | |
| TGAATTAATGAGTGAAATGG+GGG | - | chr7_4:49442744-49442763 | Msa1159750:intron | 30.0% | |
| CTCAGAGTGAAAATTAGTAA+AGG | - | chr7_4:49442911-49442930 | Msa1159750:CDS | 30.0% | |
| ! | TCTCTCAAAAAAAGCCTTTT+AGG | - | chr7_4:49443046-49443065 | Msa1159750:intron | 30.0% |
| TACTAAACACTTGACCTAAA+AGG | + | chr7_4:49443063-49443082 | None:intergenic | 30.0% | |
| TGTATTCATTTATGCGTTGT+TGG | - | chr7_4:49443137-49443156 | Msa1159750:intron | 30.0% | |
| ! | CTGCAACAAACATTTTTCTT+TGG | - | chr7_4:49443160-49443179 | Msa1159750:intron | 30.0% |
| !!! | AGCTCATATGTTTTGTTTCT+TGG | - | chr7_4:49443264-49443283 | Msa1159750:intron | 30.0% |
| !! | AAGTAACTATTGGTTTCTTC+AGG | + | chr7_4:49443521-49443540 | None:intergenic | 30.0% |
| TAGTTAATTTACAACCTGCT+TGG | + | chr7_4:49443644-49443663 | None:intergenic | 30.0% | |
| ! | TGTCTCACAATTTTGCTTTA+AGG | - | chr7_4:49443957-49443976 | Msa1159750:intron | 30.0% |
| GAAAATGTTAATGCAGACAT+GGG | + | chr7_4:49444021-49444040 | None:intergenic | 30.0% | |
| !!! | TTAATTTTTTCCACACTAGG+CGG | - | chr7_4:49444274-49444293 | Msa1159750:intron | 30.0% |
| !!! | AGTGAACGTTGATTTTAAAC+TGG | - | chr7_4:49444336-49444355 | Msa1159750:intron | 30.0% |
| ! | CACTGATTGTAAGTACATAA+GGG | + | chr7_4:49444677-49444696 | None:intergenic | 30.0% |
| ! | TCACTGATTGTAAGTACATA+AGG | + | chr7_4:49444678-49444697 | None:intergenic | 30.0% |
| TGAAGGTGATAAGTATAAGA+TGG | - | chr7_4:49444833-49444852 | Msa1159750:intron | 30.0% | |
| AGTATAAGATGGCAAAACAT+TGG | - | chr7_4:49444844-49444863 | Msa1159750:intron | 30.0% | |
| GTATAAGATGGCAAAACATT+GGG | - | chr7_4:49444845-49444864 | Msa1159750:intron | 30.0% | |
| TATAAGATGGCAAAACATTG+GGG | - | chr7_4:49444846-49444865 | Msa1159750:intron | 30.0% | |
| TTAGTATTGTGAGAATGACA+TGG | - | chr7_4:49444874-49444893 | Msa1159750:intron | 30.0% | |
| ! | TGTTTAGTTCAAAACCCAAA+AGG | + | chr7_4:49444960-49444979 | None:intergenic | 30.0% |
| AAGCTTATCTTATGGTAACA+GGG | + | chr7_4:49445056-49445075 | None:intergenic | 30.0% | |
| !!! | GACTGGTTCGTATTTTTATT+TGG | - | chr7_4:49445080-49445099 | Msa1159750:intron | 30.0% |
| ATAGTCAGGAAAAGGATATT+GGG | - | chr7_4:49445188-49445207 | Msa1159750:intron | 30.0% | |
| ! | AACTAGCTTATTTGAATCTG+CGG | + | chr7_4:49445242-49445261 | None:intergenic | 30.0% |
| TGGATCTTCATTTAAAGACT+TGG | + | chr7_4:49445272-49445291 | None:intergenic | 30.0% | |
| CAAGGAATTGAACTTTGATA+GGG | - | chr7_4:49445372-49445391 | Msa1159750:CDS | 30.0% | |
| GAATAGACTTACATTTCTGT+CGG | + | chr7_4:49445574-49445593 | None:intergenic | 30.0% | |
| !! | TCGTGCATTTGTATTTTTAC+AGG | - | chr7_4:49445783-49445802 | Msa1159750:intron | 30.0% |
| !! | CGTGCATTTGTATTTTTACA+GGG | - | chr7_4:49445784-49445803 | Msa1159750:intron | 30.0% |
| ! | ATATGCACTGTACTTTTGTA+GGG | + | chr7_4:49445909-49445928 | None:intergenic | 30.0% |
| !!! | TATGATCTTGTTTTCCCTAA+AGG | - | chr7_4:49445926-49445945 | Msa1159750:intron | 30.0% |
| GTTCTTAAATTCAGGTAACT+TGG | - | chr7_4:49446073-49446092 | Msa1159750:intron | 30.0% | |
| GATACTGAAGTTGAAAATGA+TGG | - | chr7_4:49446131-49446150 | Msa1159750:intron | 30.0% | |
| ! | GTCTAAATAAAGTACCACTA+GGG | + | chr7_4:49446183-49446202 | None:intergenic | 30.0% |
| ! | TGTCTAAATAAAGTACCACT+AGG | + | chr7_4:49446184-49446203 | None:intergenic | 30.0% |
| GAGATAAGAAGAAAAAAGAG+TGG | + | chr7_4:49446262-49446281 | None:intergenic | 30.0% | |
| TTTCTTCTTATCTCAAAGGA+CGG | - | chr7_4:49446268-49446287 | Msa1159750:intron | 30.0% | |
| ! | AACTAACCTTGTAATTTGTG+GGG | + | chr7_4:49446638-49446657 | None:intergenic | 30.0% |
| ! | GAACTAACCTTGTAATTTGT+GGG | + | chr7_4:49446639-49446658 | None:intergenic | 30.0% |
| TGAACTAACCTTGTAATTTG+TGG | + | chr7_4:49446640-49446659 | None:intergenic | 30.0% | |
| TCTGCTATATGAAAATTACC+TGG | + | chr7_4:49446754-49446773 | None:intergenic | 30.0% | |
| !! | GTGAATTTAACTCTAAAGCT+GGG | + | chr7_4:49446914-49446933 | None:intergenic | 30.0% |
| !! | TGTGAATTTAACTCTAAAGC+TGG | + | chr7_4:49446915-49446934 | None:intergenic | 30.0% |
| GATACGATATGTATCTGATA+CGG | - | chr7_4:49447228-49447247 | Msa1159750:CDS | 30.0% | |
| AGATGTCGAAGTTATTTGAC+GGG | - | chr7_4:49440414-49440433 | Msa1159750:three_prime_UTR | 35.0% | |
| TGAATTTGACACTGTTCTCA+AGG | - | chr7_4:49440475-49440494 | Msa1159750:three_prime_UTR | 35.0% | |
| !! | TGTTAGTGTTGTTTAGGTGT+TGG | - | chr7_4:49440795-49440814 | Msa1159750:intron | 35.0% |
| ! | ATTTTTGCTTGAAGCGTGTA+TGG | + | chr7_4:49442024-49442043 | None:intergenic | 35.0% |
| ! | AAAGTGCAACAAAAGTGTGT+GGG | + | chr7_4:49442100-49442119 | None:intergenic | 35.0% |
| AATTCTTTCCTCATATCACG+CGG | + | chr7_4:49442125-49442144 | None:intergenic | 35.0% | |
| ! | AGCGTTTAGGTTTAAGGATT+TGG | - | chr7_4:49442184-49442203 | Msa1159750:intron | 35.0% |
| TGGCTGTGTTTGATTATATG+TGG | + | chr7_4:49442217-49442236 | None:intergenic | 35.0% | |
| !!! | TACATTGATTTTCATAGCCG+AGG | - | chr7_4:49442257-49442276 | Msa1159750:CDS | 35.0% |
| GTTCTTCAATGTGCTAAAGA+AGG | - | chr7_4:49442333-49442352 | Msa1159750:CDS | 35.0% | |
| TTCAATGTGCTAAAGAAGGA+AGG | - | chr7_4:49442337-49442356 | Msa1159750:CDS | 35.0% | |
| AACTTGCGAATATTGGAACA+TGG | + | chr7_4:49442466-49442485 | None:intergenic | 35.0% | |
| !!! | ATTCGCAAGTTGCTTTTTGA+AGG | - | chr7_4:49442475-49442494 | Msa1159750:CDS | 35.0% |
| !!! | TTCGCAAGTTGCTTTTTGAA+GGG | - | chr7_4:49442476-49442495 | Msa1159750:CDS | 35.0% |
| !!! | AGTTGCTTTTTGAAGGGTTT+TGG | - | chr7_4:49442482-49442501 | Msa1159750:CDS | 35.0% |
| !!! | GAATTTTAGAGGGTTTTGGA+GGG | + | chr7_4:49442607-49442626 | None:intergenic | 35.0% |
| !! | AGAATTTTAGAGGGTTTTGG+AGG | + | chr7_4:49442608-49442627 | None:intergenic | 35.0% |
| GAATTAATGAGTGAAATGGG+GGG | - | chr7_4:49442745-49442764 | Msa1159750:intron | 35.0% | |
| ! | GTAGAAAAGCACACATATAC+TGG | - | chr7_4:49443080-49443099 | Msa1159750:CDS | 35.0% |
| TGGTTTATGTCCCAAATTGT+TGG | - | chr7_4:49443209-49443228 | Msa1159750:intron | 35.0% | |
| GGTTTATGTCCCAAATTGTT+GGG | - | chr7_4:49443210-49443229 | Msa1159750:intron | 35.0% | |
| GTTTATGTCCCAAATTGTTG+GGG | - | chr7_4:49443211-49443230 | Msa1159750:intron | 35.0% | |
| GTGGCTAATATGACTCTTAA+TGG | - | chr7_4:49443241-49443260 | Msa1159750:intron | 35.0% | |
| GATCAAAGATTGGATAAGTG+TGG | + | chr7_4:49443420-49443439 | None:intergenic | 35.0% | |
| TGTTCCACAAGAGTCATATA+AGG | - | chr7_4:49443578-49443597 | Msa1159750:intron | 35.0% | |
| AGAACCTTATATGACTCTTG+TGG | + | chr7_4:49443585-49443604 | None:intergenic | 35.0% | |
| ! | TTCAACTTTTCCTTGAGAAG+AGG | - | chr7_4:49443872-49443891 | Msa1159750:intron | 35.0% |
| GGAAAATGTTAATGCAGACA+TGG | + | chr7_4:49444022-49444041 | None:intergenic | 35.0% | |
| !!! | ATCTGCATTTTGAGACTGTA+AGG | - | chr7_4:49444063-49444082 | Msa1159750:intron | 35.0% |
| ATGCATCAATACATCAAAGC+AGG | + | chr7_4:49444157-49444176 | None:intergenic | 35.0% | |
| ATCCTTATCTGTTAGACTGA+AGG | - | chr7_4:49444204-49444223 | Msa1159750:CDS | 35.0% | |
| TCCTTATCTGTTAGACTGAA+GGG | - | chr7_4:49444205-49444224 | Msa1159750:CDS | 35.0% | |
| GTAAGAACTAGGATTCACTT+AGG | - | chr7_4:49444358-49444377 | Msa1159750:intron | 35.0% | |
| GATTCACTTAGGCAAGAATT+CGG | - | chr7_4:49444369-49444388 | Msa1159750:intron | 35.0% | |
| ATTCACTTAGGCAAGAATTC+GGG | - | chr7_4:49444370-49444389 | Msa1159750:intron | 35.0% | |
| ! | TCTGAAGTGAAGTTTCTGAT+TGG | - | chr7_4:49444496-49444515 | Msa1159750:intron | 35.0% |
| ATAAGGGATACTAATCCCTA+AGG | + | chr7_4:49444661-49444680 | None:intergenic | 35.0% | |
| ! | CTGTTATTGAGGTTTGAAGT+TGG | - | chr7_4:49444776-49444795 | Msa1159750:intron | 35.0% |
| GATGAATCTATTGCTCAAAG+AGG | - | chr7_4:49444900-49444919 | Msa1159750:intron | 35.0% | |
| TGCTTTAATGCTGTATGTTG+TGG | - | chr7_4:49444932-49444951 | Msa1159750:CDS | 35.0% | |
| ! | TGTATGTTGTGGTACCTTTT+GGG | - | chr7_4:49444943-49444962 | Msa1159750:CDS | 35.0% |
| CAAGCTTATCTTATGGTAAC+AGG | + | chr7_4:49445057-49445076 | None:intergenic | 35.0% | |
| CTGTTACCATAAGATAAGCT+TGG | - | chr7_4:49445055-49445074 | Msa1159750:intron | 35.0% | |
| ATAAAGATCCACTCTGAACA+GGG | + | chr7_4:49445132-49445151 | None:intergenic | 35.0% | |
| TGGATCTTTATCTTCACGTA+AGG | - | chr7_4:49445141-49445160 | Msa1159750:intron | 35.0% | |
| CATAGTCAGGAAAAGGATAT+TGG | - | chr7_4:49445187-49445206 | Msa1159750:intron | 35.0% | |
| GATATTGGGATAATGCAATC+CGG | - | chr7_4:49445202-49445221 | Msa1159750:intron | 35.0% | |
| !! | AATTCCTTGCTGGTCTTTAA+TGG | + | chr7_4:49445361-49445380 | None:intergenic | 35.0% |
| ATCAAAGTTCAATTCCTTGC+TGG | + | chr7_4:49445371-49445390 | None:intergenic | 35.0% | |
| GCAAGGAATTGAACTTTGAT+AGG | - | chr7_4:49445371-49445390 | Msa1159750:CDS | 35.0% | |
| ATTGAACTTTGATAGGGTTG+TGG | - | chr7_4:49445378-49445397 | Msa1159750:CDS | 35.0% | |
| !!! | TTGGTTTTGAAGCTTCTGAA+AGG | - | chr7_4:49445461-49445480 | Msa1159750:intron | 35.0% |
| !!! | TGGTTTTGAAGCTTCTGAAA+GGG | - | chr7_4:49445462-49445481 | Msa1159750:intron | 35.0% |
| TCTGAAAGGGATAAGCTAAT+TGG | - | chr7_4:49445475-49445494 | Msa1159750:intron | 35.0% | |
| AAGGGATAAGCTAATTGGTA+TGG | - | chr7_4:49445480-49445499 | Msa1159750:intron | 35.0% | |
| AAGTTGACACACATAGTAGT+TGG | - | chr7_4:49445544-49445563 | Msa1159750:intron | 35.0% | |
| AGTTGACACACATAGTAGTT+GGG | - | chr7_4:49445545-49445564 | Msa1159750:intron | 35.0% | |
| !! | TGTATTTTTACAGGGAAAGG+TGG | - | chr7_4:49445792-49445811 | Msa1159750:intron | 35.0% |
| !! | GTATTTTTACAGGGAAAGGT+GGG | - | chr7_4:49445793-49445812 | Msa1159750:intron | 35.0% |
| ATTACGCTGTTAAAACCTCA+TGG | - | chr7_4:49445846-49445865 | Msa1159750:intron | 35.0% | |
| ! | CATATGCACTGTACTTTTGT+AGG | + | chr7_4:49445910-49445929 | None:intergenic | 35.0% |
| ATCATGATAGCACACCTTTA+GGG | + | chr7_4:49445943-49445962 | None:intergenic | 35.0% | |
| AATCATGATAGCACACCTTT+AGG | + | chr7_4:49445944-49445963 | None:intergenic | 35.0% | |
| !! | TGTGTTCTGTGTCTACTTTT+TGG | - | chr7_4:49445977-49445996 | Msa1159750:intron | 35.0% |
| TGCTTTAATTCATACCCTAG+TGG | - | chr7_4:49446166-49446185 | Msa1159750:intron | 35.0% | |
| TACTCATTGTTCAGTCATTG+TGG | - | chr7_4:49446448-49446467 | Msa1159750:intron | 35.0% | |
| ATCTAAATTCACCTACAACC+TGG | - | chr7_4:49446477-49446496 | Msa1159750:intron | 35.0% | |
| TCTAAATTCACCTACAACCT+GGG | - | chr7_4:49446478-49446497 | Msa1159750:intron | 35.0% | |
| ! | ACTAACCTTGTAATTTGTGG+GGG | + | chr7_4:49446637-49446656 | None:intergenic | 35.0% |
| GGTGAATAGACTTATCTTAC+CGG | - | chr7_4:49446795-49446814 | Msa1159750:intron | 35.0% | |
| TATCTCATGTAACCCGAAAA+TGG | - | chr7_4:49446850-49446869 | Msa1159750:intron | 35.0% | |
| CATGTAACTCTTTCAGATTC+TGG | + | chr7_4:49447067-49447086 | None:intergenic | 35.0% | |
| CAGAATCTGAAAGAGTTACA+TGG | - | chr7_4:49447065-49447084 | Msa1159750:intron | 35.0% | |
| ACATGGTTATCTGATCATTC+TGG | - | chr7_4:49447082-49447101 | Msa1159750:intron | 35.0% | |
| ! | GTTATCTGATCATTCTGGAA+GGG | - | chr7_4:49447087-49447106 | Msa1159750:intron | 35.0% |
| CGTCGTTTCTTAGAAAACAT+AGG | - | chr7_4:49447304-49447323 | Msa1159750:CDS | 35.0% | |
| ATTCACCAGGTGGAAATAAG+TGG | + | chr7_4:49440460-49440479 | None:intergenic | 40.0% | |
| AGAACAGTGTCAAATTCACC+AGG | + | chr7_4:49440473-49440492 | None:intergenic | 40.0% | |
| ! | ATAATCATTTTCGCCGTTGC+GGG | + | chr7_4:49440546-49440565 | None:intergenic | 40.0% |
| ! | GATAATCATTTTCGCCGTTG+CGG | + | chr7_4:49440547-49440566 | None:intergenic | 40.0% |
| AGAAATGACGTACGTGTTGA+CGG | + | chr7_4:49440583-49440602 | None:intergenic | 40.0% | |
| ! | GAAAGTGCAACAAAAGTGTG+TGG | + | chr7_4:49442101-49442120 | None:intergenic | 40.0% |
| ! | ACTGGACAATTAGAGCGTTT+AGG | - | chr7_4:49442171-49442190 | Msa1159750:intron | 40.0% |
| ACTGCACATGTATATAGGTG+TGG | + | chr7_4:49442237-49442256 | None:intergenic | 40.0% | |
| AGCAAGTGAAGGTTTGTGTA+GGG | + | chr7_4:49442368-49442387 | None:intergenic | 40.0% | |
| CATAGTTAAGCAGCAAGTGA+AGG | + | chr7_4:49442379-49442398 | None:intergenic | 40.0% | |
| ! | CTTCACTTGCTGCTTAACTA+TGG | - | chr7_4:49442377-49442396 | Msa1159750:CDS | 40.0% |
| GAGAACAAATATAGGAAGGG+AGG | + | chr7_4:49442678-49442697 | None:intergenic | 40.0% | |
| CCACAAATCCCCAACAATTT+GGG | + | chr7_4:49443222-49443241 | None:intergenic | 40.0% | |
| ACCACAAATCCCCAACAATT+TGG | + | chr7_4:49443223-49443242 | None:intergenic | 40.0% | |
| AAATTGTTGGGGATTTGTGG+TGG | - | chr7_4:49443222-49443241 | Msa1159750:intron | 40.0% | |
| CTAATCCACCGTGTTATGTT+TGG | - | chr7_4:49443478-49443497 | Msa1159750:intron | 40.0% | |
| TATAAGGTTCTTCCGTTCTC+TGG | - | chr7_4:49443594-49443613 | Msa1159750:intron | 40.0% | |
| ATAAGGTTCTTCCGTTCTCT+GGG | - | chr7_4:49443595-49443614 | Msa1159750:intron | 40.0% | |
| CAGATCTTTAACCCAGAGAA+CGG | + | chr7_4:49443609-49443628 | None:intergenic | 40.0% | |
| ! | GATTTTCTCTCCTCTTCTCA+AGG | + | chr7_4:49443885-49443904 | None:intergenic | 40.0% |
| TTACTGATGAGTGCGAACAA+GGG | + | chr7_4:49444092-49444111 | None:intergenic | 40.0% | |
| ATTACTGATGAGTGCGAACA+AGG | + | chr7_4:49444093-49444112 | None:intergenic | 40.0% | |
| !! | GTATTTCTAGCAGTCTGCAA+CGG | - | chr7_4:49444241-49444260 | Msa1159750:CDS | 40.0% |
| TCAGAAACTTCACTTCAGAC+TGG | + | chr7_4:49444495-49444514 | None:intergenic | 40.0% | |
| TAAAAACCTGTCTTCGCAAC+AGG | + | chr7_4:49444593-49444612 | None:intergenic | 40.0% | |
| TCTTCTATTGCACTGCCTTA+GGG | - | chr7_4:49444643-49444662 | Msa1159750:intron | 40.0% | |
| ! | CTGTATGTTGTGGTACCTTT+TGG | - | chr7_4:49444942-49444961 | Msa1159750:CDS | 40.0% |
| AGTCAGCCAAGCTTATCTTA+TGG | + | chr7_4:49445064-49445083 | None:intergenic | 40.0% | |
| ATAAGATAAGCTTGGCTGAC+TGG | - | chr7_4:49445063-49445082 | Msa1159750:intron | 40.0% | |
| TTGGATAGCATGTCTGAATG+AGG | - | chr7_4:49445099-49445118 | Msa1159750:intron | 40.0% | |
| GATAAAGATCCACTCTGAAC+AGG | + | chr7_4:49445133-49445152 | None:intergenic | 40.0% | |
| TATCTTCACGTAAGGTGACT+AGG | - | chr7_4:49445149-49445168 | Msa1159750:intron | 40.0% | |
| !! | CTTTTGACTGTGTAGCATCT+GGG | + | chr7_4:49445297-49445316 | None:intergenic | 40.0% |
| !! | TCTTTTGACTGTGTAGCATC+TGG | + | chr7_4:49445298-49445317 | None:intergenic | 40.0% |
| TGTGGCCAATGATTCTGAAT+CGG | - | chr7_4:49445396-49445415 | Msa1159750:CDS | 40.0% | |
| GTTGTCCGATTCAGAATCAT+TGG | + | chr7_4:49445404-49445423 | None:intergenic | 40.0% | |
| TTCTGCAGTCTGCTAAATAC+TGG | + | chr7_4:49445432-49445451 | None:intergenic | 40.0% | |
| GACTGCAGAATATCACTTGT+TGG | - | chr7_4:49445442-49445461 | Msa1159750:intron | 40.0% | |
| CTAATTGGTATGGTGCGTAA+AGG | - | chr7_4:49445490-49445509 | Msa1159750:intron | 40.0% | |
| GTATCAATGTAGACGATTCC+TGG | - | chr7_4:49445678-49445697 | Msa1159750:intron | 40.0% | |
| TGGGATATAGTGAGAACTGT+TGG | - | chr7_4:49445812-49445831 | Msa1159750:intron | 40.0% | |
| ATAGTGAGAACTGTTGGTCA+AGG | - | chr7_4:49445818-49445837 | Msa1159750:intron | 40.0% | |
| TGTTAAAACCTCATGGCTTG+AGG | - | chr7_4:49445853-49445872 | Msa1159750:intron | 40.0% | |
| CTACATTGTTCTTTGCCTCT+CGG | + | chr7_4:49446112-49446131 | None:intergenic | 40.0% | |
| CATATTACCTTGATCACGAC+AGG | + | chr7_4:49446338-49446357 | None:intergenic | 40.0% | |
| CTGTCGTGATCAAGGTAATA+TGG | - | chr7_4:49446336-49446355 | Msa1159750:intron | 40.0% | |
| CTAAATTCACCTACAACCTG+GGG | - | chr7_4:49446479-49446498 | Msa1159750:intron | 40.0% | |
| TGAAACCCCCACAAATTACA+AGG | - | chr7_4:49446629-49446648 | Msa1159750:intron | 40.0% | |
| GCCACTGCTCATACTTTATT+CGG | - | chr7_4:49446665-49446684 | Msa1159750:intron | 40.0% | |
| TCCGAATAAAGTATGAGCAG+TGG | + | chr7_4:49446669-49446688 | None:intergenic | 40.0% | |
| TCATGTAACCCGAAAATGGA+GGG | - | chr7_4:49446854-49446873 | Msa1159750:intron | 40.0% | |
| !! | ACTCTAAAGCTGGGCAAAAA+AGG | + | chr7_4:49446905-49446924 | None:intergenic | 40.0% |
| AGATTCTGGATCTGATTCAC+TGG | + | chr7_4:49447053-49447072 | None:intergenic | 40.0% | |
| GGTTATCTGATCATTCTGGA+AGG | - | chr7_4:49447086-49447105 | Msa1159750:intron | 40.0% | |
| CCAAAATGTGTTGTGATGCA+CGG | - | chr7_4:49447188-49447207 | Msa1159750:CDS | 40.0% | |
| ACAGTGTCAAATTCACCAGG+TGG | + | chr7_4:49440470-49440489 | None:intergenic | 45.0% | |
| CTCAAGGTCGTTGAAGAGAA+CGG | - | chr7_4:49440491-49440510 | Msa1159750:three_prime_UTR | 45.0% | |
| AACGGCGGTCAAGTTCATAT+CGG | - | chr7_4:49440509-49440528 | Msa1159750:three_prime_UTR | 45.0% | |
| GGATTTGATCTTTCCCGCAA+CGG | - | chr7_4:49440530-49440549 | Msa1159750:three_prime_UTR | 45.0% | |
| TCCAAAGGCTGCAAGATGAT+TGG | - | chr7_4:49440708-49440727 | Msa1159750:CDS | 45.0% | |
| ACCAATCATCTTGCAGCCTT+TGG | + | chr7_4:49440712-49440731 | None:intergenic | 45.0% | |
| CAAAAATGTCCGTCCTACTG+AGG | - | chr7_4:49442037-49442056 | Msa1159750:intron | 45.0% | |
| CAAGTGAAGGTTTGTGTAGG+GGG | + | chr7_4:49442366-49442385 | None:intergenic | 45.0% | |
| GCAAGTGAAGGTTTGTGTAG+GGG | + | chr7_4:49442367-49442386 | None:intergenic | 45.0% | |
| CAGCAAGTGAAGGTTTGTGT+AGG | + | chr7_4:49442369-49442388 | None:intergenic | 45.0% | |
| ! | CACTTGCTGCTTAACTATGG+AGG | - | chr7_4:49442380-49442399 | Msa1159750:CDS | 45.0% |
| GCTGTCAAAATACTCGCATG+TGG | - | chr7_4:49442402-49442421 | Msa1159750:CDS | 45.0% | |
| !! | ATACTCGCATGTGGCTTTGA+TGG | - | chr7_4:49442411-49442430 | Msa1159750:CDS | 45.0% |
| !! | TGGCTTTGATGGAGATCAGA+TGG | - | chr7_4:49442422-49442441 | Msa1159750:CDS | 45.0% |
| ATATAGGAAGGGAGGAGTGA+AGG | + | chr7_4:49442670-49442689 | None:intergenic | 45.0% | |
| ACTGTATGTATGTGACCTGC+AGG | - | chr7_4:49442711-49442730 | Msa1159750:intron | 45.0% | |
| !!! | TGTTTTGGCTCCAGAGTACA+AGG | - | chr7_4:49442819-49442838 | Msa1159750:intron | 45.0% |
| ATGTACCAGACCTTGTACTC+TGG | + | chr7_4:49442832-49442851 | None:intergenic | 45.0% | |
| CCCAAATTGTTGGGGATTTG+TGG | - | chr7_4:49443219-49443238 | Msa1159750:intron | 45.0% | |
| ACCGTGTTATGTTTGGCAGT+GGG | - | chr7_4:49443485-49443504 | Msa1159750:intron | 45.0% | |
| GGGTTAAAGATCTGTGTGAC+TGG | - | chr7_4:49443615-49443634 | Msa1159750:intron | 45.0% | |
| GTGAAGCTGCAGGGAAAAAA+TGG | + | chr7_4:49443922-49443941 | None:intergenic | 45.0% | |
| GCCCTTCAGTCTAACAGATA+AGG | + | chr7_4:49444209-49444228 | None:intergenic | 45.0% | |
| ! | TTCAATTTTGCCGCCTAGTG+TGG | + | chr7_4:49444287-49444306 | None:intergenic | 45.0% |
| AAGGCAGTGCAATAGAAGAC+AGG | + | chr7_4:49444642-49444661 | None:intergenic | 45.0% | |
| GTCTTCTATTGCACTGCCTT+AGG | - | chr7_4:49444642-49444661 | Msa1159750:intron | 45.0% | |
| AGCGCAACATAGTCAGGAAA+AGG | - | chr7_4:49445180-49445199 | Msa1159750:intron | 45.0% | |
| ATTTGAATCTGCGGCTCTTG+AGG | + | chr7_4:49445233-49445252 | None:intergenic | 45.0% | |
| TCCAGTCCTCGATGTTAAAG+AGG | - | chr7_4:49445318-49445337 | Msa1159750:intron | 45.0% | |
| CATCTGCCTCTTTAACATCG+AGG | + | chr7_4:49445327-49445346 | None:intergenic | 45.0% | |
| ACCTCCATTAAAGACCAGCA+AGG | - | chr7_4:49445354-49445373 | Msa1159750:CDS | 45.0% | |
| !! | TCCTTGCTGGTCTTTAATGG+AGG | + | chr7_4:49445358-49445377 | None:intergenic | 45.0% |
| ATTGGTATGGTGCGTAAAGG+TGG | - | chr7_4:49445493-49445512 | Msa1159750:intron | 45.0% | |
| TTGGTATGGTGCGTAAAGGT+GGG | - | chr7_4:49445494-49445513 | Msa1159750:intron | 45.0% | |
| !!! | CAGGGACTCGTTTTTTTTCG+CGG | + | chr7_4:49445886-49445905 | None:intergenic | 45.0% |
| ! | CACTGTACTTTTGTAGGGCA+GGG | + | chr7_4:49445904-49445923 | None:intergenic | 45.0% |
| ACGGATGTGATATAGTCGCA+CGG | - | chr7_4:49446287-49446306 | Msa1159750:intron | 45.0% | |
| TATAGTCGCACGGAAGAGAT+TGG | - | chr7_4:49446297-49446316 | Msa1159750:intron | 45.0% | |
| AGTGTTTCCTGTCGTGATCA+AGG | - | chr7_4:49446328-49446347 | Msa1159750:intron | 45.0% | |
| !! | CTTTATTCGGAGTACCGATG+TGG | - | chr7_4:49446678-49446697 | Msa1159750:intron | 45.0% |
| ACCAACCTGTTTGACCACAT+CGG | + | chr7_4:49446695-49446714 | None:intergenic | 45.0% | |
| CTCATGTAACCCGAAAATGG+AGG | - | chr7_4:49446853-49446872 | Msa1159750:intron | 45.0% | |
| TGATTCACTGGAAGCTGCAT+AGG | + | chr7_4:49447041-49447060 | None:intergenic | 45.0% | |
| ! | CCGTGCATCACAACACATTT+TGG | + | chr7_4:49447191-49447210 | None:intergenic | 45.0% |
| ATGTGTTGTGATGCACGGAT+AGG | - | chr7_4:49447193-49447212 | Msa1159750:CDS | 45.0% | |
| AAGGTCGTTGAAGAGAACGG+CGG | - | chr7_4:49440494-49440513 | Msa1159750:three_prime_UTR | 50.0% | |
| CTGTATCATGGACACCAGAC+CGG | + | chr7_4:49442063-49442082 | None:intergenic | 50.0% | |
| CTGAGGAACAACAGCTACCT+CGG | + | chr7_4:49442277-49442296 | None:intergenic | 50.0% | |
| CACTGCCAAACATAACACGG+TGG | + | chr7_4:49443486-49443505 | None:intergenic | 50.0% | |
| CACCGTGTTATGTTTGGCAG+TGG | - | chr7_4:49443484-49443503 | Msa1159750:intron | 50.0% | |
| GCCCACTGCCAAACATAACA+CGG | + | chr7_4:49443489-49443508 | None:intergenic | 50.0% | |
| TGTGTGACTGGAATCCAAGC+AGG | - | chr7_4:49443627-49443646 | Msa1159750:intron | 50.0% | |
| GCACTTCTTCGTCAGTTCTG+CGG | + | chr7_4:49443780-49443799 | None:intergenic | 50.0% | |
| AGTGAACCTGTTGCGAAGAC+AGG | - | chr7_4:49444584-49444603 | Msa1159750:intron | 50.0% | |
| GACTGTTCTTACGCTGCTGA+AGG | - | chr7_4:49444816-49444835 | Msa1159750:intron | 50.0% | |
| AGATCCACTCTGAACAGGGT+AGG | + | chr7_4:49445128-49445147 | None:intergenic | 50.0% | |
| CTCAACAGCGCAACATAGTC+AGG | - | chr7_4:49445174-49445193 | Msa1159750:intron | 50.0% | |
| GCCTCTTTAACATCGAGGAC+TGG | + | chr7_4:49445322-49445341 | None:intergenic | 50.0% | |
| TGGTATGGTGCGTAAAGGTG+GGG | - | chr7_4:49445495-49445514 | Msa1159750:intron | 50.0% | |
| ! | GCACTGTACTTTTGTAGGGC+AGG | + | chr7_4:49445905-49445924 | None:intergenic | 50.0% |
| ! | CAGATCCTCATTGGCTGAGA+CGG | - | chr7_4:49446504-49446523 | Msa1159750:intron | 50.0% |
| TCTATCCGTCTCAGCCAATG+AGG | + | chr7_4:49446512-49446531 | None:intergenic | 50.0% | |
| !! | GAGTACCGATGTGGTCAAAC+AGG | - | chr7_4:49446687-49446706 | Msa1159750:intron | 50.0% |
| ACCGATGTGGTCAAACAGGT+TGG | - | chr7_4:49446691-49446710 | Msa1159750:intron | 50.0% | |
| TGTAACCCGAAAATGGAGGG+AGG | - | chr7_4:49446857-49446876 | Msa1159750:intron | 50.0% | |
| GTAACCCGAAAATGGAGGGA+GGG | - | chr7_4:49446858-49446877 | Msa1159750:intron | 50.0% | |
| TAACCCGAAAATGGAGGGAG+GGG | - | chr7_4:49446859-49446878 | Msa1159750:intron | 50.0% | |
| ! | TGATCCCCTCCCTCCATTTT+CGG | + | chr7_4:49446866-49446885 | None:intergenic | 50.0% |
| GACTTCTCGAGATCGAAGAG+CGG | - | chr7_4:49447012-49447031 | Msa1159750:intron | 50.0% | |
| ACTTCTCGAGATCGAAGAGC+GGG | - | chr7_4:49447013-49447032 | Msa1159750:intron | 50.0% | |
| AGAGGGTTGAGTTTCACTGC+TGG | + | chr7_4:49447153-49447172 | None:intergenic | 50.0% | |
| TCGCGCCACTTATTTCCACC+TGG | - | chr7_4:49440452-49440471 | Msa1159750:three_prime_UTR | 55.0% | |
| AATGTCCGTCCTACTGAGGC+CGG | - | chr7_4:49442041-49442060 | Msa1159750:intron | 55.0% | |
| CACTTTCGCCGCGTGATATG+AGG | - | chr7_4:49442114-49442133 | Msa1159750:intron | 55.0% | |
| GTGAAGGTTTGTGTAGGGGG+AGG | + | chr7_4:49442363-49442382 | None:intergenic | 55.0% | |
| TGGCTCCAGAGTACAAGGTC+TGG | - | chr7_4:49442824-49442843 | Msa1159750:intron | 55.0% | |
| CAGCTGACAGTGAAGCTGCA+GGG | + | chr7_4:49443931-49443950 | None:intergenic | 55.0% | |
| GAGTCCTACCCTGTTCAGAG+TGG | - | chr7_4:49445121-49445140 | Msa1159750:intron | 55.0% | |
| TGCGGCTCTTGAGGATGAAC+CGG | + | chr7_4:49445224-49445243 | None:intergenic | 55.0% | |
| ! | GACTGTGTAGCATCTGGGAC+TGG | + | chr7_4:49445292-49445311 | None:intergenic | 55.0% |
| GGTATGGTGCGTAAAGGTGG+GGG | - | chr7_4:49445496-49445515 | Msa1159750:intron | 55.0% | |
| GTCACAGTCCTCAAGCCATG+AGG | + | chr7_4:49445864-49445883 | None:intergenic | 55.0% | |
| GGTCACTACTCAAGACCGAG+AGG | - | chr7_4:49446094-49446113 | Msa1159750:intron | 55.0% | |
| CGTCTCAGCCAATGAGGATC+TGG | + | chr7_4:49446506-49446525 | None:intergenic | 55.0% | |
| ! | GATCCCCTCCCTCCATTTTC+GGG | + | chr7_4:49446865-49446884 | None:intergenic | 55.0% |
| CTTCTCGAGATCGAAGAGCG+GGG | - | chr7_4:49447014-49447033 | Msa1159750:intron | 55.0% | |
| ! | GAAGGGATGCGCTTCTAGAG+AGG | - | chr7_4:49447104-49447123 | Msa1159750:intron | 55.0% |
| GGTGCACATTCGTTCGCAGA+GGG | + | chr7_4:49447170-49447189 | None:intergenic | 55.0% | |
| TGGTGCACATTCGTTCGCAG+AGG | + | chr7_4:49447171-49447190 | None:intergenic | 55.0% | |
| GCAGCTGACAGTGAAGCTGC+AGG | + | chr7_4:49443932-49443951 | None:intergenic | 60.0% | |
| GGATCTGGACCCCAGGTTGT+AGG | + | chr7_4:49446491-49446510 | None:intergenic | 60.0% | |
| CCAATGAGGATCTGGACCCC+AGG | + | chr7_4:49446498-49446517 | None:intergenic | 60.0% | |
| CCTGGGGTCCAGATCCTCAT+TGG | - | chr7_4:49446495-49446514 | Msa1159750:intron | 60.0% | |
| CCAGACCGGCCTCAGTAGGA+CGG | + | chr7_4:49442049-49442068 | None:intergenic | 65.0% | |
| GACACCAGACCGGCCTCAGT+AGG | + | chr7_4:49442053-49442072 | None:intergenic | 65.0% | |
| CCGTCCTACTGAGGCCGGTC+TGG | - | chr7_4:49442046-49442065 | Msa1159750:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 49440402 | 49447365 | 49440402 | ID=Msa1159750;Name=Msa1159750 |
| chr7_4 | mRNA | 49440402 | 49447365 | 49440402 | ID=Msa1159750-mRNA-1;Parent=Msa1159750;Name=Msa1159750-mRNA-1;_AED=0.11;_eAED=0.11;_QI=14|0.76|0.64|0.92|1|1|14|206|622 |
| chr7_4 | exon | 49440402 | 49440764 | 49440402 | ID=Msa1159750-mRNA-1:exon:13629;Parent=Msa1159750-mRNA-1 |
| chr7_4 | exon | 49441227 | 49441305 | 49441227 | ID=Msa1159750-mRNA-1:exon:13628;Parent=Msa1159750-mRNA-1 |
| chr7_4 | exon | 49441418 | 49441481 | 49441418 | ID=Msa1159750-mRNA-1:exon:13627;Parent=Msa1159750-mRNA-1 |
| chr7_4 | exon | 49441580 | 49441680 | 49441580 | ID=Msa1159750-mRNA-1:exon:13626;Parent=Msa1159750-mRNA-1 |
| chr7_4 | exon | 49441820 | 49441962 | 49441820 | ID=Msa1159750-mRNA-1:exon:13625;Parent=Msa1159750-mRNA-1 |
| chr7_4 | exon | 49442186 | 49442660 | 49442186 | ID=Msa1159750-mRNA-1:exon:13624;Parent=Msa1159750-mRNA-1 |
| chr7_4 | exon | 49442846 | 49442972 | 49442846 | ID=Msa1159750-mRNA-1:exon:13623;Parent=Msa1159750-mRNA-1 |
| chr7_4 | exon | 49443066 | 49443131 | 49443066 | ID=Msa1159750-mRNA-1:exon:13622;Parent=Msa1159750-mRNA-1 |
| chr7_4 | exon | 49443410 | 49443474 | 49443410 | ID=Msa1159750-mRNA-1:exon:13621;Parent=Msa1159750-mRNA-1 |
| chr7_4 | exon | 49444119 | 49444263 | 49444119 | ID=Msa1159750-mRNA-1:exon:13620;Parent=Msa1159750-mRNA-1 |
| chr7_4 | exon | 49444927 | 49445034 | 49444927 | ID=Msa1159750-mRNA-1:exon:13619;Parent=Msa1159750-mRNA-1 |
| chr7_4 | exon | 49445324 | 49445445 | 49445324 | ID=Msa1159750-mRNA-1:exon:13618;Parent=Msa1159750-mRNA-1 |
| chr7_4 | exon | 49447038 | 49447080 | 49447038 | ID=Msa1159750-mRNA-1:exon:13617;Parent=Msa1159750-mRNA-1 |
| chr7_4 | exon | 49447178 | 49447365 | 49447178 | ID=Msa1159750-mRNA-1:exon:13616;Parent=Msa1159750-mRNA-1 |
| chr7_4 | five_prime_UTR | 49447352 | 49447365 | 49447352 | ID=Msa1159750-mRNA-1:five_prime_utr;Parent=Msa1159750-mRNA-1 |
| chr7_4 | CDS | 49447178 | 49447351 | 49447178 | ID=Msa1159750-mRNA-1:cds;Parent=Msa1159750-mRNA-1 |
| chr7_4 | CDS | 49447038 | 49447080 | 49447038 | ID=Msa1159750-mRNA-1:cds;Parent=Msa1159750-mRNA-1 |
| chr7_4 | CDS | 49445324 | 49445445 | 49445324 | ID=Msa1159750-mRNA-1:cds;Parent=Msa1159750-mRNA-1 |
| chr7_4 | CDS | 49444927 | 49445034 | 49444927 | ID=Msa1159750-mRNA-1:cds;Parent=Msa1159750-mRNA-1 |
| chr7_4 | CDS | 49444119 | 49444263 | 49444119 | ID=Msa1159750-mRNA-1:cds;Parent=Msa1159750-mRNA-1 |
| chr7_4 | CDS | 49443410 | 49443474 | 49443410 | ID=Msa1159750-mRNA-1:cds;Parent=Msa1159750-mRNA-1 |
| chr7_4 | CDS | 49443066 | 49443131 | 49443066 | ID=Msa1159750-mRNA-1:cds;Parent=Msa1159750-mRNA-1 |
| chr7_4 | CDS | 49442846 | 49442972 | 49442846 | ID=Msa1159750-mRNA-1:cds;Parent=Msa1159750-mRNA-1 |
| chr7_4 | CDS | 49442186 | 49442660 | 49442186 | ID=Msa1159750-mRNA-1:cds;Parent=Msa1159750-mRNA-1 |
| chr7_4 | CDS | 49441820 | 49441962 | 49441820 | ID=Msa1159750-mRNA-1:cds;Parent=Msa1159750-mRNA-1 |
| chr7_4 | CDS | 49441580 | 49441680 | 49441580 | ID=Msa1159750-mRNA-1:cds;Parent=Msa1159750-mRNA-1 |
| chr7_4 | CDS | 49441418 | 49441481 | 49441418 | ID=Msa1159750-mRNA-1:cds;Parent=Msa1159750-mRNA-1 |
| chr7_4 | CDS | 49441227 | 49441305 | 49441227 | ID=Msa1159750-mRNA-1:cds;Parent=Msa1159750-mRNA-1 |
| chr7_4 | CDS | 49440608 | 49440764 | 49440608 | ID=Msa1159750-mRNA-1:cds;Parent=Msa1159750-mRNA-1 |
| chr7_4 | three_prime_UTR | 49440402 | 49440607 | 49440402 | ID=Msa1159750-mRNA-1:three_prime_utr;Parent=Msa1159750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
