Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1122040 | XP_039689705.1 | 64.372 | 494 | 142 | 7 | 3 | 489 | 5 | 471 | 0.0 | 612 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1122040 | G7KSM4 | 73.295 | 528 | 105 | 8 | 2 | 519 | 4 | 505 | 0.0 | 742 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0697060 | Msa1122040 | 0.808296 | 3.321224e-50 | -8.615850e-47 |
| Msa0735170 | Msa1122040 | 0.810043 | 1.402169e-50 | -8.615850e-47 |
| Msa0762360 | Msa1122040 | 0.810979 | 8.805102e-51 | -8.615850e-47 |
| Msa0188830 | Msa1122040 | 0.805136 | 1.544103e-49 | -8.615850e-47 |
| Msa0220740 | Msa1122040 | 0.800237 | 1.583544e-48 | -8.615850e-47 |
| Msa1014540 | Msa1122040 | 0.800161 | 1.640863e-48 | -8.615850e-47 |
| Msa1030970 | Msa1122040 | 0.800169 | 1.634642e-48 | -8.615850e-47 |
| Msa1075220 | Msa1122040 | -0.814466 | 1.518989e-51 | -8.615850e-47 |
| Msa1082500 | Msa1122040 | 0.804612 | 1.987370e-49 | -8.615850e-47 |
| Msa1122040 | Msa1159750 | 0.827061 | 1.925612e-54 | -8.615850e-47 |
| Msa1122040 | Msa1160670 | 0.803890 | 2.808825e-49 | -8.615850e-47 |
| Msa1122040 | Msa1162550 | -0.823823 | 1.125696e-53 | -8.615850e-47 |
| Msa1122040 | Msa1207220 | 0.808564 | 2.910567e-50 | -8.615850e-47 |
| Msa1122040 | Msa1284680 | 0.802991 | 4.313231e-49 | -8.615850e-47 |
| Msa1122040 | Msa1322890 | 0.811948 | 5.421498e-51 | -8.615850e-47 |
| Msa1122040 | Msa1392260 | 0.815674 | 8.190559e-52 | -8.615850e-47 |
| Msa1122040 | Msa1429900 | 0.804937 | 1.699599e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1122040 | MtrunA17_Chr7g0257121 | 87.255 | 204 | 25 | 1 | 2 | 204 | 4 | 207 | 3.93e-126 | 371 |
| Msa1122040 | MtrunA17_Chr7g0257131 | 73.507 | 268 | 60 | 5 | 261 | 519 | 1 | 266 | 7.81e-124 | 373 |
| Msa1122040 | MtrunA17_Chr1g0159631 | 69.145 | 269 | 66 | 6 | 228 | 489 | 2 | 260 | 6.67e-111 | 352 |
| Msa1122040 | MtrunA17_Chr1g0159641 | 69.608 | 204 | 61 | 1 | 3 | 206 | 5 | 207 | 4.24e-96 | 295 |
| Msa1122040 | MtrunA17_Chr7g0257141 | 73.469 | 49 | 13 | 0 | 443 | 491 | 4 | 52 | 1.88e-17 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1122040 | AT1G77320.1 | 44.358 | 514 | 246 | 6 | 2 | 510 | 4 | 482 | 5.55e-130 | 406 |
| Msa1122040 | AT1G77320.3 | 44.358 | 514 | 246 | 6 | 2 | 510 | 4 | 482 | 1.60e-129 | 405 |
| Msa1122040 | AT1G77320.2 | 44.422 | 493 | 217 | 8 | 2 | 489 | 4 | 444 | 3.37e-121 | 382 |
Find 151 sgRNAs with CRISPR-Local
Find 393 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGTGCATCACAACACATTT+TGG | 0.197165 | 7_3:-72244287 | None:intergenic |
| CATGTAACTCTTTCAGATTC+TGG | 0.208703 | 7_3:-72244163 | None:intergenic |
| TATAAGGTTCTTCCGTTCTC+TGG | 0.223069 | 7_3:+72240684 | Msa1122040:CDS |
| AATTCCTTGCTGGTCTTTAA+TGG | 0.233301 | 7_3:-72242449 | None:intergenic |
| CATAGTCAGGAAAAGGATAT+TGG | 0.280059 | 7_3:+72242278 | Msa1122040:CDS |
| AATGAATTAATGACTGAAAT+GGG | 0.299419 | 7_3:+72239832 | Msa1122040:CDS |
| ATCATGATAGCACACCTTTA+GGG | 0.299500 | 7_3:-72243031 | None:intergenic |
| GCAAGGAATTGAACTTTGAT+AGG | 0.303595 | 7_3:+72242462 | Msa1122040:CDS |
| ACCAATCATCTTGCAGCCTT+TGG | 0.305539 | 7_3:-72237765 | None:intergenic |
| CTTCACTTGCTGCTTAACTA+TGG | 0.310136 | 7_3:+72239464 | Msa1122040:CDS |
| AACCATTCATAAGTAACTAT+TGG | 0.328810 | 7_3:-72240618 | None:intergenic |
| GTCTTCTATTGCACTGCCTT+AGG | 0.330077 | 7_3:+72241733 | Msa1122040:CDS |
| AAGTAACTATTGGTTTCTTC+AGG | 0.331549 | 7_3:-72240608 | None:intergenic |
| AAATGAATTAATGACTGAAA+TGG | 0.336089 | 7_3:+72239831 | Msa1122040:CDS |
| TCATTGTCACAATACTAATA+TGG | 0.342271 | 7_3:-72241960 | None:intergenic |
| ACATGGTTATCTGATCATTC+TGG | 0.345390 | 7_3:+72244181 | Msa1122040:CDS |
| TCACTGATTGTAAGTACATA+AGG | 0.355598 | 7_3:-72241766 | None:intergenic |
| ATCAAAGTTCAATTCCTTGC+TGG | 0.364015 | 7_3:-72242459 | None:intergenic |
| ATCCTCATCCTGGCGGTCAT+TGG | 0.364428 | 7_3:+72243594 | Msa1122040:CDS |
| TCTTCTATTGCACTGCCTTA+GGG | 0.366676 | 7_3:+72241734 | Msa1122040:CDS |
| CTACATTGTTCTTTGCCTCT+CGG | 0.370564 | 7_3:-72243200 | None:intergenic |
| GATAAAGATCCACTCTGAAC+AGG | 0.374142 | 7_3:-72242221 | None:intergenic |
| TCTGAAAGGGATAAGCTAAT+TGG | 0.375829 | 7_3:+72242566 | Msa1122040:CDS |
| GTATAAGATGGCAAAACATT+GGG | 0.376549 | 7_3:+72241936 | Msa1122040:CDS |
| TGTTCCACAAGAGTCATATA+AGG | 0.376888 | 7_3:+72240668 | Msa1122040:CDS |
| ATGTACCAGGCCTTGTACTC+TGG | 0.385575 | 7_3:-72239919 | None:intergenic |
| GACTGCAGAATATCACTTGT+TGG | 0.390318 | 7_3:+72242533 | Msa1122040:CDS |
| GTTGTCCGATTCAGAATCAT+TGG | 0.396259 | 7_3:-72242492 | None:intergenic |
| TGCGGCTCTTGAGGATGAAC+CGG | 0.415535 | 7_3:-72242312 | None:intergenic |
| GTTCTTAAATTCAGGTAACT+TGG | 0.421047 | 7_3:+72243164 | Msa1122040:intron |
| CATTGTTACTTAGAAAATAT+AGG | 0.428906 | 7_3:+72244363 | Msa1122040:three_prime_UTR |
| CTGGCGGTCATTGGCGGAGA+TGG | 0.429988 | 7_3:+72243603 | Msa1122040:CDS |
| ATAGTCAGGAAAAGGATATT+GGG | 0.430713 | 7_3:+72242279 | Msa1122040:CDS |
| CACTGATTGTAAGTACATAA+GGG | 0.435786 | 7_3:-72241765 | None:intergenic |
| ATCATTTAAAGACAAGCATT+CGG | 0.437953 | 7_3:-72242612 | None:intergenic |
| AACCAATAGTTACTTATGAA+TGG | 0.439724 | 7_3:+72240616 | Msa1122040:CDS |
| ATCTAAATCCACCTACTCCC+TGG | 0.440053 | 7_3:+72243564 | Msa1122040:CDS |
| GCATCTGCCTCTTTAACATC+GGG | 0.440507 | 7_3:-72242416 | None:intergenic |
| CTCAACAGCGCAACATAGTC+AGG | 0.447483 | 7_3:+72242265 | Msa1122040:CDS |
| TCCAAAGGCTGCAAGATGAT+TGG | 0.448394 | 7_3:+72237764 | Msa1122040:CDS |
| TTCTGCAGTCTGCTAAATAC+TGG | 0.451669 | 7_3:-72242520 | None:intergenic |
| TGGGGTCCAGATCCTCATCC+TGG | 0.452089 | 7_3:+72243584 | Msa1122040:CDS |
| CTCATCCTGGCGGTCATTGG+CGG | 0.456744 | 7_3:+72243597 | Msa1122040:CDS |
| AGAAATGACGTACGTGTTGA+CGG | 0.457579 | 7_3:-72237637 | None:intergenic |
| GACTGTGTAGCATCTGGGAC+TGG | 0.460422 | 7_3:-72242380 | None:intergenic |
| GCCTCTTTAACATCGGGGAC+TGG | 0.467015 | 7_3:-72242410 | None:intergenic |
| TGACCGCCAGGATGAGGATC+TGG | 0.471894 | 7_3:-72243590 | None:intergenic |
| AGCATCTGCCTCTTTAACAT+CGG | 0.478386 | 7_3:-72242417 | None:intergenic |
| TGGATCTTCATTTAAAGACT+TGG | 0.481516 | 7_3:-72242360 | None:intergenic |
| TATGTTCGCACGGAAGAGAT+TGG | 0.484473 | 7_3:+72243387 | Msa1122040:CDS |
| CAAGGAATTGAACTTTGATA+GGG | 0.486929 | 7_3:+72242463 | Msa1122040:CDS |
| TAGTTAATTTACAACCTGCT+TGG | 0.488008 | 7_3:-72240731 | None:intergenic |
| ATAAGGTTCTTCCGTTCTCT+GGG | 0.489433 | 7_3:+72240685 | Msa1122040:CDS |
| AGATTCTGGATCTGATTCAC+TGG | 0.489673 | 7_3:-72244149 | None:intergenic |
| TTGGTATGGTGCGTAAAGGT+GGG | 0.490499 | 7_3:+72242585 | Msa1122040:CDS |
| ATTTGAATCTGCGGCTCTTG+AGG | 0.495817 | 7_3:-72242321 | None:intergenic |
| AGGATGAGGATCTGGACCCC+AGG | 0.497805 | 7_3:-72243582 | None:intergenic |
| AGCAAGTGAAGGTTTGTGTA+GGG | 0.500205 | 7_3:-72239452 | None:intergenic |
| AGTATAAGATGGCAAAACAT+TGG | 0.501783 | 7_3:+72241935 | Msa1122040:CDS |
| TCTAAATCCACCTACTCCCT+GGG | 0.502561 | 7_3:+72243565 | Msa1122040:CDS |
| AGGATTCAAAATCAAAATCA+AGG | 0.505681 | 7_3:+72244223 | Msa1122040:CDS |
| ACTTCTCGAGATCGAAGAGC+GGG | 0.507285 | 7_3:+72244112 | Msa1122040:CDS |
| ATTGAACTTTGATAGGGTTG+TGG | 0.508522 | 7_3:+72242469 | Msa1122040:CDS |
| AACTAGCTTATTTGAATCTG+CGG | 0.509713 | 7_3:-72242330 | None:intergenic |
| TGATTCACTGGAAGCTGCAT+AGG | 0.509987 | 7_3:-72244137 | None:intergenic |
| AGATGTCGAAGTTATTTGAC+GGG | 0.512379 | 7_3:+72237471 | Msa1122040:exon |
| AAGTTGACACACATAGTAGT+TGG | 0.513618 | 7_3:+72242635 | Msa1122040:CDS |
| AGAGGGTTGAGTTTCACTGC+TGG | 0.518075 | 7_3:-72244249 | None:intergenic |
| GGGTTAAAGATCTGTGTGAC+TGG | 0.518889 | 7_3:+72240705 | Msa1122040:CDS |
| TCCAGTCCCCGATGTTAAAG+AGG | 0.520138 | 7_3:+72242409 | Msa1122040:CDS |
| TGTGGCCAATGATTCTGAAT+CGG | 0.523262 | 7_3:+72242487 | Msa1122040:CDS |
| TATCTTCACGTAAGGTGACT+AGG | 0.523702 | 7_3:+72242240 | Msa1122040:CDS |
| AGTGTTTCCTGTCGTGATCA+AGG | 0.525978 | 7_3:+72243418 | Msa1122040:CDS |
| ATTGGTATGGTGCGTAAAGG+TGG | 0.526488 | 7_3:+72242584 | Msa1122040:CDS |
| AACGGCTGTCAAGTTCATAT+CGG | 0.528504 | 7_3:+72237566 | Msa1122040:CDS |
| AGCGCAACATAGTCAGGAAA+AGG | 0.530252 | 7_3:+72242271 | Msa1122040:CDS |
| AGTTGACACACATAGTAGTT+GGG | 0.532390 | 7_3:+72242636 | Msa1122040:CDS |
| TCCTTGCTGGTCTTTAATGG+AGG | 0.538133 | 7_3:-72242446 | None:intergenic |
| GTTCTTCAATGTGCTAAAGA+AGG | 0.540178 | 7_3:+72239420 | Msa1122040:CDS |
| CAAGTGAAGGTTTGTGTAGG+GGG | 0.540423 | 7_3:-72239450 | None:intergenic |
| CACTTGCTGCTTAACTATGG+AGG | 0.540521 | 7_3:+72239467 | Msa1122040:CDS |
| TTGGATAGCATGTCTGAATG+AGG | 0.541648 | 7_3:+72242190 | Msa1122040:intron |
| GACTGTTCTTACGCTGCTGA+AGG | 0.542724 | 7_3:+72241907 | Msa1122040:CDS |
| CATCTCCGCCAATGACCGCC+AGG | 0.544327 | 7_3:-72243602 | None:intergenic |
| ATGAATTAATGACTGAAATG+GGG | 0.544943 | 7_3:+72239833 | Msa1122040:CDS |
| CGTCGTTTCTTAGAAAACAA+AGG | 0.545455 | 7_3:+72244404 | Msa1122040:three_prime_UTR |
| CATATTACCTTGATCACGAC+AGG | 0.546457 | 7_3:-72243425 | None:intergenic |
| AAGATGTCGAAGTTATTTGA+CGG | 0.546558 | 7_3:+72237470 | Msa1122040:exon |
| TGGATCTTTATCTTCACGTA+AGG | 0.548339 | 7_3:+72242232 | Msa1122040:CDS |
| GGATTTGATCTTTCCCGCAA+CGG | 0.550469 | 7_3:+72237587 | Msa1122040:CDS |
| GATACTGAAGTTGAAAATGA+TGG | 0.550714 | 7_3:+72243222 | Msa1122040:CDS |
| CAGCAAGTGAAGGTTTGTGT+AGG | 0.552725 | 7_3:-72239453 | None:intergenic |
| GGTATGGTGCGTAAAGGTGG+GGG | 0.553283 | 7_3:+72242587 | Msa1122040:CDS |
| GAATAGACTTACATTTCTGT+CGG | 0.553737 | 7_3:-72242662 | None:intergenic |
| GATGAATCTATTGCTCAAAG+AGG | 0.554272 | 7_3:+72241991 | Msa1122040:CDS |
| CTAATTGGTATGGTGCGTAA+AGG | 0.554609 | 7_3:+72242581 | Msa1122040:CDS |
| ATTACGCTGTTAAAACCTCA+TGG | 0.555104 | 7_3:+72242937 | Msa1122040:CDS |
| GGTGCACATTCGTTCGCAGA+GGG | 0.555729 | 7_3:-72244266 | None:intergenic |
| ATTCACCAGGTGGAAATAAG+TGG | 0.556146 | 7_3:-72237514 | None:intergenic |
| TGAATTAATGACTGAAATGG+GGG | 0.556766 | 7_3:+72239834 | Msa1122040:CDS |
| AAGGGATAAGCTAATTGGTA+TGG | 0.558062 | 7_3:+72242571 | Msa1122040:CDS |
| TGAAGGTGATAAGTATAAGA+TGG | 0.560642 | 7_3:+72241924 | Msa1122040:CDS |
| TGGGATATAGTGAGAACTGT+TGG | 0.564814 | 7_3:+72242903 | Msa1122040:CDS |
| TCTGGACCCCAGGGAGTAGG+TGG | 0.567715 | 7_3:-72243572 | None:intergenic |
| GATATTGGGATAATGCAATC+CGG | 0.568990 | 7_3:+72242293 | Msa1122040:CDS |
| TACTCATTGTTCAGTCGTTG+TGG | 0.569409 | 7_3:+72243535 | Msa1122040:intron |
| TGGTATGGTGCGTAAAGGTG+GGG | 0.569876 | 7_3:+72242586 | Msa1122040:CDS |
| CACAAGGTCGTTGAAGAGAA+CGG | 0.573054 | 7_3:+72237548 | Msa1122040:CDS |
| TGTTAAAACCTCATGGCTTG+AGG | 0.578771 | 7_3:+72242944 | Msa1122040:CDS |
| GATACGATATGTATCTGATA+CGG | 0.580941 | 7_3:+72244327 | Msa1122040:three_prime_UTR |
| AAGGCAGTGCAATAGAAGAC+AGG | 0.583532 | 7_3:-72241730 | None:intergenic |
| TTCAATGTGCTAAAGAAGGA+AGG | 0.584964 | 7_3:+72239424 | Msa1122040:CDS |
| CATAGTTAAGCAGCAAGTGA+AGG | 0.588376 | 7_3:-72239463 | None:intergenic |
| GAAGGGATGCGCTTCTAGAG+AGG | 0.592314 | 7_3:+72244203 | Msa1122040:CDS |
| CAGAATCTGAAAGAGTTACA+TGG | 0.592521 | 7_3:+72244164 | Msa1122040:CDS |
| GGTTATCTGATCATTCTGGA+AGG | 0.592927 | 7_3:+72244185 | Msa1122040:CDS |
| TCGCGCCACTTATTTCCACC+TGG | 0.597465 | 7_3:+72237509 | Msa1122040:CDS |
| TGCTTTAATTCATACCCTAG+TGG | 0.599380 | 7_3:+72243257 | Msa1122040:CDS |
| ATAAGGGATACTAATCCCTA+AGG | 0.600002 | 7_3:-72241749 | None:intergenic |
| AGAACCTTATATGACTCTTG+TGG | 0.604681 | 7_3:-72240672 | None:intergenic |
| TGTGTGACTGGAATCCAAGC+AGG | 0.611137 | 7_3:+72240717 | Msa1122040:CDS |
| ACAGAATTTAAATCTGATGA+CGG | 0.615413 | 7_3:-72239874 | None:intergenic |
| TTTAAAGATCTAAAATCCAA+AGG | 0.618984 | 7_3:+72237749 | Msa1122040:CDS |
| GTTATCTGATCATTCTGGAA+GGG | 0.619930 | 7_3:+72244186 | Msa1122040:CDS |
| TGGTGCACATTCGTTCGCAG+AGG | 0.621836 | 7_3:-72244267 | None:intergenic |
| ATAAAGATCCACTCTGAACA+GGG | 0.625634 | 7_3:-72242220 | None:intergenic |
| GCAAGTGAAGGTTTGTGTAG+GGG | 0.625744 | 7_3:-72239451 | None:intergenic |
| GTCTAAATAAAGTACCACTA+GGG | 0.626378 | 7_3:-72243271 | None:intergenic |
| ATAGTGAGAACTGTTGGTCA+AGG | 0.627865 | 7_3:+72242909 | Msa1122040:CDS |
| GGATGAGGATCTGGACCCCA+GGG | 0.630371 | 7_3:-72243581 | None:intergenic |
| AGATCCACTCTGAACAGGGT+AGG | 0.631294 | 7_3:-72242216 | None:intergenic |
| CAGATCTTTAACCCAGAGAA+CGG | 0.632179 | 7_3:-72240696 | None:intergenic |
| GACTTCTCGAGATCGAAGAG+CGG | 0.633085 | 7_3:+72244111 | Msa1122040:CDS |
| ATGTGTTGTGATGCACGGAT+AGG | 0.633598 | 7_3:+72244292 | Msa1122040:three_prime_UTR |
| TGAACAGCATCAAATTCACC+AGG | 0.641376 | 7_3:-72237527 | None:intergenic |
| TGGCTTTGATGCAGATCAGA+TGG | 0.642454 | 7_3:+72239509 | Msa1122040:CDS |
| TATAAGATGGCAAAACATTG+GGG | 0.643219 | 7_3:+72241937 | Msa1122040:CDS |
| CCAAAATGTGTTGTGATGCA+CGG | 0.649215 | 7_3:+72244287 | Msa1122040:three_prime_UTR |
| TGAATTTGATGCTGTTCACA+AGG | 0.661134 | 7_3:+72237532 | Msa1122040:CDS |
| TTAGTATTGTGACAATGACA+TGG | 0.662227 | 7_3:+72241965 | Msa1122040:CDS |
| GAGTCCTACCCTGTTCAGAG+TGG | 0.662340 | 7_3:+72242212 | Msa1122040:CDS |
| GCTGTCAAAATACTCGCATG+TGG | 0.667280 | 7_3:+72239489 | Msa1122040:CDS |
| ACGGATGTGATATGTTCGCA+CGG | 0.667874 | 7_3:+72243377 | Msa1122040:CDS |
| ACCTCCATTAAAGACCAGCA+AGG | 0.676859 | 7_3:+72242445 | Msa1122040:CDS |
| GGTCCAGATCCTCATCCTGG+CGG | 0.677937 | 7_3:+72243587 | Msa1122040:CDS |
| GAATTAATGACTGAAATGGG+GGG | 0.693912 | 7_3:+72239835 | Msa1122040:CDS |
| GTCACAGTCCTCAAGCCATG+AGG | 0.701883 | 7_3:-72242952 | None:intergenic |
| CTAAATCCACCTACTCCCTG+GGG | 0.709015 | 7_3:+72243566 | Msa1122040:CDS |
| ACAGCATCAAATTCACCAGG+TGG | 0.711249 | 7_3:-72237524 | None:intergenic |
| GGACACTACTCAAGACCGAG+AGG | 0.738599 | 7_3:+72243185 | Msa1122040:CDS |
| CATCTGCCTCTTTAACATCG+GGG | 0.742764 | 7_3:-72242415 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AACATGATAAATTTTAAATA+AGG | - | chr7_3:72243828-72243847 | None:intergenic | 10.0% |
| !!! | TCATTTTATCGAATAATTAA+CGG | - | chr7_3:72237938-72237957 | None:intergenic | 15.0% |
| !!! | TCATTTTATCGAATAATTAA+CGG | - | chr7_3:72237938-72237957 | None:intergenic | 15.0% |
| !!! | ATAGATTTTTTGTTTTATAC+TGG | + | chr7_3:72239240-72239259 | Msa1122040:intron | 15.0% |
| !!! | ATCTGTTATTTTTTTTTTCT+TGG | + | chr7_3:72239730-72239749 | Msa1122040:intron | 15.0% |
| !! | TATTTGATAGAATTATCAAA+AGG | - | chr7_3:72240917-72240936 | None:intergenic | 15.0% |
| !! | TTAATCATAAATATTGGAAA+AGG | - | chr7_3:72242849-72242868 | None:intergenic | 15.0% |
| !! | AGAAGATTAATCATAAATAT+TGG | - | chr7_3:72242855-72242874 | None:intergenic | 15.0% |
| !! | ATAGTATAAGTATACTATAA+AGG | - | chr7_3:72243510-72243529 | None:intergenic | 15.0% |
| !! | AAAAAAGTTTCAAAAATTAG+TGG | - | chr7_3:72243648-72243667 | None:intergenic | 15.0% |
| !! | TTTATAGTACAAATGTTAAT+TGG | + | chr7_3:72243668-72243687 | Msa1122040:intron | 15.0% |
| !! | CAATTTACATTACAATATAA+AGG | + | chr7_3:72243700-72243719 | Msa1122040:intron | 15.0% |
| !!! | TTTAAAGATCTAAAATCCAA+AGG | + | chr7_3:72237749-72237768 | Msa1122040:CDS | 20.0% |
| !!! | TCATTTTCTCGAATAATTAA+CGG | - | chr7_3:72237817-72237836 | None:intergenic | 20.0% |
| !!! | TCATTTTCTCGAATAATTAA+CGG | - | chr7_3:72237817-72237836 | None:intergenic | 20.0% |
| !!! | AGTATATTTTAGTGTTGTTT+AGG | + | chr7_3:72238087-72238106 | Msa1122040:intron | 20.0% |
| !!! | TCATTTTCTCGAATAATTAA+CGG | - | chr7_3:72237817-72237836 | None:intergenic | 20.0% |
| !!! | AGTATATTTTAGTGTTGTTT+AGG | + | chr7_3:72238087-72238106 | Msa1122040:intron | 20.0% |
| !!! | TCATTTTCTCGAATAATTAA+CGG | - | chr7_3:72237817-72237836 | None:intergenic | 20.0% |
| !!! | TCATTTTCTCGAATAATTAA+CGG | - | chr7_3:72237817-72237836 | None:intergenic | 20.0% |
| !!! | TCATTTTCTCGAATAATTAA+CGG | - | chr7_3:72237817-72237836 | None:intergenic | 20.0% |
| !!! | TCATTTTCTCGAATAATTAA+CGG | - | chr7_3:72237817-72237836 | None:intergenic | 20.0% |
| !!! | AATATATGTTAGTGTTGTTT+AGG | + | chr7_3:72238813-72238832 | Msa1122040:intron | 20.0% |
| !!! | TCATTTTCTCGAATAATTAA+CGG | - | chr7_3:72237817-72237836 | None:intergenic | 20.0% |
| !!! | AATATATGTTAGTGTTGTTT+AGG | + | chr7_3:72238813-72238832 | Msa1122040:intron | 20.0% |
| !! | TAATAAAAGAAACAAAACTG+AGG | - | chr7_3:72239381-72239400 | None:intergenic | 20.0% |
| !!! | TGTTTCTTTTATTATTGAGT+AGG | + | chr7_3:72239387-72239406 | Msa1122040:intron | 20.0% |
| !!! | TTAAACCTTAGAATTTTAGA+GGG | - | chr7_3:72239707-72239726 | None:intergenic | 20.0% |
| !! | AAATGAATTAATGACTGAAA+TGG | + | chr7_3:72239831-72239850 | Msa1122040:CDS | 20.0% |
| !! | AATGAATTAATGACTGAAAT+GGG | + | chr7_3:72239832-72239851 | Msa1122040:CDS | 20.0% |
| !! | AAAAACAAAAACAAAAGTGA+AGG | - | chr7_3:72240276-72240295 | None:intergenic | 20.0% |
| !! | ACAACTTTGATATTTACAAT+AGG | - | chr7_3:72240452-72240471 | None:intergenic | 20.0% |
| !! | GTAAATTAACTAATAGACAT+TGG | + | chr7_3:72240742-72240761 | Msa1122040:intron | 20.0% |
| !!! | GAAAAGCTTATTTTACAAAA+TGG | + | chr7_3:72240835-72240854 | Msa1122040:intron | 20.0% |
| !!! | ATTCATTTTTACAAGAATTC+AGG | + | chr7_3:72241219-72241238 | Msa1122040:intron | 20.0% |
| !!! | CAATATTCAACTATTTGTTA+TGG | + | chr7_3:72241271-72241290 | Msa1122040:intron | 20.0% |
| !!! | AATCTTTTTTCTACATTAGT+TGG | + | chr7_3:72241613-72241632 | Msa1122040:intron | 20.0% |
| !! | GTAAAGAAATGAAAGAATAA+CGG | - | chr7_3:72242102-72242121 | None:intergenic | 20.0% |
| !!! | GAATTTATTTGTTAGTTTTC+TGG | + | chr7_3:72242744-72242763 | Msa1122040:intron | 20.0% |
| !! | TAAATATTGGAAAAGGAATA+TGG | - | chr7_3:72242842-72242861 | None:intergenic | 20.0% |
| !!! | TACTTTTTGGTTAATCTATT+GGG | + | chr7_3:72243081-72243100 | Msa1122040:intron | 20.0% |
| !!! | TTTTCTAAGTTCTTAAATTC+AGG | + | chr7_3:72243156-72243175 | Msa1122040:intron | 20.0% |
| !! | TAAGAATAATTCAGAAAAAG+TGG | - | chr7_3:72243323-72243342 | None:intergenic | 20.0% |
| !! | TTTACATTACAATATAAAGG+AGG | + | chr7_3:72243703-72243722 | Msa1122040:intron | 20.0% |
| !!! | AAATTTTAAATAAGGAAGCA+TGG | - | chr7_3:72243820-72243839 | None:intergenic | 20.0% |
| !! | TAAAATTTATCATGTTTACC+AGG | + | chr7_3:72243832-72243851 | Msa1122040:intron | 20.0% |
| !!! | CATTGTTACTTAGAAAATAT+AGG | + | chr7_3:72244363-72244382 | Msa1122040:three_prime_UTR | 20.0% |
| ! | AATAATTAACGGTATCAGTA+TGG | - | chr7_3:72237806-72237825 | None:intergenic | 25.0% |
| !!! | AGTATATGTTAGTGTTGTTT+AGG | + | chr7_3:72237845-72237864 | Msa1122040:intron | 25.0% |
| ! | AATAATTAACGGTATCAGTA+TGG | - | chr7_3:72237806-72237825 | None:intergenic | 25.0% |
| !!! | AGTATATGTTAGTGTTGTTT+AGG | + | chr7_3:72237845-72237864 | Msa1122040:intron | 25.0% |
| ! | AATAATTAACGGTATCAGTA+TGG | - | chr7_3:72237806-72237825 | None:intergenic | 25.0% |
| ! | AATAATTAACGGTATCAGTA+TGG | - | chr7_3:72237806-72237825 | None:intergenic | 25.0% |
| !!! | AGTATATGTTAGTGTTGTTT+AGG | + | chr7_3:72237845-72237864 | Msa1122040:intron | 25.0% |
| ! | AATAATTAACGGTATCAGTA+TGG | - | chr7_3:72237806-72237825 | None:intergenic | 25.0% |
| ! | AATAATTAACGGTATCAGTA+TGG | - | chr7_3:72237806-72237825 | None:intergenic | 25.0% |
| !!! | AGTATATGTTAGTGTTGTTT+AGG | + | chr7_3:72237845-72237864 | Msa1122040:intron | 25.0% |
| ! | AATAATTAACGGTATCAGTA+TGG | - | chr7_3:72237806-72237825 | None:intergenic | 25.0% |
| !!! | AGTATATGTTAGTGTTGTTT+AGG | + | chr7_3:72237845-72237864 | Msa1122040:intron | 25.0% |
| ! | AATAATTAACGGTATCAGTA+TGG | - | chr7_3:72237806-72237825 | None:intergenic | 25.0% |
| !!! | AGTATATGTTAGTGTTGTTT+AGG | + | chr7_3:72237845-72237864 | Msa1122040:intron | 25.0% |
| ! | AATAATTAACGGTATCAGTA+TGG | - | chr7_3:72237806-72237825 | None:intergenic | 25.0% |
| ! | AATAATTAACGGTATCAGTA+TGG | - | chr7_3:72237806-72237825 | None:intergenic | 25.0% |
| ! | ATCATGTGTTAGTATTGTTT+AGG | + | chr7_3:72239059-72239078 | Msa1122040:intron | 25.0% |
| !! | CTTAAACCTTAGAATTTTAG+AGG | - | chr7_3:72239708-72239727 | None:intergenic | 25.0% |
| ! | ATTGAGAACAAATATAGGAA+GGG | - | chr7_3:72239775-72239794 | None:intergenic | 25.0% |
| ! | AATTGAGAACAAATATAGGA+AGG | - | chr7_3:72239776-72239795 | None:intergenic | 25.0% |
| ! | TTCCTATATTTGTTCTCAAT+TGG | + | chr7_3:72239775-72239794 | Msa1122040:intron | 25.0% |
| ! | TTCCAATTGAGAACAAATAT+AGG | - | chr7_3:72239780-72239799 | None:intergenic | 25.0% |
| ! | ATGAATTAATGACTGAAATG+GGG | + | chr7_3:72239833-72239852 | Msa1122040:CDS | 25.0% |
| ! | ACAGAATTTAAATCTGATGA+CGG | - | chr7_3:72239877-72239896 | None:intergenic | 25.0% |
| !! | TGTCATTGTGAAAAATGTTT+TGG | + | chr7_3:72239894-72239913 | Msa1122040:CDS | 25.0% |
| ! | TGAACAAAAAATAATGTACC+AGG | - | chr7_3:72239935-72239954 | None:intergenic | 25.0% |
| ! | TACTAAACACTTGTACTAAA+AGG | - | chr7_3:72240153-72240172 | None:intergenic | 25.0% |
| !!! | CTTTTGTTTTTGTTTTTGCT+TGG | + | chr7_3:72240279-72240298 | Msa1122040:intron | 25.0% |
| ! | TAGGAAGATGAATTTATTAG+TGG | - | chr7_3:72240433-72240452 | None:intergenic | 25.0% |
| ! | ATCAAAATCTGATCAAAGAT+TGG | - | chr7_3:72240520-72240539 | None:intergenic | 25.0% |
| ! | AACCAATAGTTACTTATGAA+TGG | + | chr7_3:72240616-72240635 | Msa1122040:CDS | 25.0% |
| ! | AACCATTCATAAGTAACTAT+TGG | - | chr7_3:72240621-72240640 | None:intergenic | 25.0% |
| !!! | AAGCTTATTTTACAAAATGG+TGG | + | chr7_3:72240838-72240857 | Msa1122040:intron | 25.0% |
| !! | AGGAAAAGTTGAATATTTTC+AGG | - | chr7_3:72240957-72240976 | None:intergenic | 25.0% |
| ! | GGAAAAAATGGTATAAATCA+AGG | - | chr7_3:72241002-72241021 | None:intergenic | 25.0% |
| ! | ATTATCATTTGTGCAAGATA+AGG | - | chr7_3:72241135-72241154 | None:intergenic | 25.0% |
| !!! | TGATTTATTTTTTCCACACT+AGG | + | chr7_3:72241362-72241381 | Msa1122040:intron | 25.0% |
| ! | AATTAATTATTCAGTCAGAG+AGG | - | chr7_3:72241831-72241850 | None:intergenic | 25.0% |
| ! | AATTCAAAGATCTGTTATTG+AGG | + | chr7_3:72241856-72241875 | Msa1122040:intron | 25.0% |
| ! | TCATTGTCACAATACTAATA+TGG | - | chr7_3:72241963-72241982 | None:intergenic | 25.0% |
| ! | ATCATTTAAAGACAAGCATT+CGG | - | chr7_3:72242615-72242634 | None:intergenic | 25.0% |
| !!! | TATTTTTGAAACTAACATCC+AGG | - | chr7_3:72242790-72242809 | None:intergenic | 25.0% |
| !! | GGATGTTAGTTTCAAAAATA+TGG | + | chr7_3:72242790-72242809 | Msa1122040:intron | 25.0% |
| ! | TCAAAAATATGGCTTTCTTA+TGG | + | chr7_3:72242801-72242820 | Msa1122040:intron | 25.0% |
| ! | GCTTTCTTATGGATTTAATT+TGG | + | chr7_3:72242812-72242831 | Msa1122040:intron | 25.0% |
| !!! | ATTTGTATTTTTACAGGGAA+AGG | + | chr7_3:72242880-72242899 | Msa1122040:intron | 25.0% |
| !!! | CTACTTTTTGGTTAATCTAT+TGG | + | chr7_3:72243080-72243099 | Msa1122040:intron | 25.0% |
| !!! | CTTTTTTCTTCTTATCTCAA+AGG | + | chr7_3:72243354-72243373 | Msa1122040:intron | 25.0% |
| ! | ATAGTACAAATGTTAATTGG+AGG | + | chr7_3:72243671-72243690 | Msa1122040:intron | 25.0% |
| ! | TTTGAGTAGCTAATAATGTT+TGG | + | chr7_3:72243873-72243892 | Msa1122040:intron | 25.0% |
| !!! | AATATCTCTTTGAAACAAAC+CGG | - | chr7_3:72243916-72243935 | None:intergenic | 25.0% |
| ! | GTTTGTTTCAAAGAGATATT+TGG | + | chr7_3:72243916-72243935 | Msa1122040:intron | 25.0% |
| ! | AGGATTCAAAATCAAAATCA+AGG | + | chr7_3:72244223-72244242 | Msa1122040:CDS | 25.0% |
| AAGATGTCGAAGTTATTTGA+CGG | + | chr7_3:72237470-72237489 | Msa1122040:exon | 30.0% | |
| CTTAACTAACAATGCATACA+CGG | - | chr7_3:72237874-72237893 | None:intergenic | 30.0% | |
| CTTAACTAACAATGCATACA+CGG | - | chr7_3:72237874-72237893 | None:intergenic | 30.0% | |
| CTTAACTAACAATGCATACA+CGG | - | chr7_3:72237874-72237893 | None:intergenic | 30.0% | |
| CTTAACTAACAATGCATACA+CGG | - | chr7_3:72237874-72237893 | None:intergenic | 30.0% | |
| CTTAACTAACAATGCATACA+CGG | - | chr7_3:72237874-72237893 | None:intergenic | 30.0% | |
| CTTAACTAACAATGCATACA+CGG | - | chr7_3:72237874-72237893 | None:intergenic | 30.0% | |
| CTTTAAATGTGTCTGTATCA+TGG | - | chr7_3:72239162-72239181 | None:intergenic | 30.0% | |
| ! | AGCGTTTAGGTTTAAGTATT+TGG | + | chr7_3:72239271-72239290 | Msa1122040:intron | 30.0% |
| ATGTAACTGCACATGTATAT+AGG | - | chr7_3:72239329-72239348 | None:intergenic | 30.0% | |
| AAAAAGCAACTTGCGAATAT+TGG | - | chr7_3:72239560-72239579 | None:intergenic | 30.0% | |
| !! | CTTAGAATTTTAGAGGGTTT+TGG | - | chr7_3:72239701-72239720 | None:intergenic | 30.0% |
| !! | CAAAACCCTCTAAAATTCTA+AGG | + | chr7_3:72239699-72239718 | Msa1122040:intron | 30.0% |
| ATTCATTTATCTTAACCTGC+AGG | - | chr7_3:72239819-72239838 | None:intergenic | 30.0% | |
| TGAATTAATGACTGAAATGG+GGG | + | chr7_3:72239834-72239853 | Msa1122040:CDS | 30.0% | |
| CTCAGAGTGAAAATTAGTAA+AGG | + | chr7_3:72240001-72240020 | Msa1122040:intron | 30.0% | |
| CGTATTCATTTATGTGTTGT+TGG | + | chr7_3:72240227-72240246 | Msa1122040:intron | 30.0% | |
| ! | CTGCAACAAACATTTTTCTT+TGG | + | chr7_3:72240250-72240269 | Msa1122040:intron | 30.0% |
| !!! | AGCTCATATGTTTTGTTTCT+TGG | + | chr7_3:72240354-72240373 | Msa1122040:intron | 30.0% |
| AGATTGGATAAGTGTGAAAA+TGG | - | chr7_3:72240504-72240523 | None:intergenic | 30.0% | |
| !! | AAGTAACTATTGGTTTCTTC+AGG | - | chr7_3:72240611-72240630 | None:intergenic | 30.0% |
| TAGTTAATTTACAACCTGCT+TGG | - | chr7_3:72240734-72240753 | None:intergenic | 30.0% | |
| ! | TGTCTCACAATTTTGCTTTA+AGG | + | chr7_3:72241049-72241068 | Msa1122040:intron | 30.0% |
| GAAAATGTTAATGCAGACAT+GGG | - | chr7_3:72241113-72241132 | None:intergenic | 30.0% | |
| !!! | TTTATTTTTTCCACACTAGG+CGG | + | chr7_3:72241365-72241384 | Msa1122040:intron | 30.0% |
| !!! | AGTGAACGTTGATTTTAAAC+TGG | + | chr7_3:72241427-72241446 | Msa1122040:CDS | 30.0% |
| GTTGATTATTGTCAATCTGT+TGG | + | chr7_3:72241528-72241547 | Msa1122040:intron | 30.0% | |
| ! | CACTGATTGTAAGTACATAA+GGG | - | chr7_3:72241768-72241787 | None:intergenic | 30.0% |
| ! | TCACTGATTGTAAGTACATA+AGG | - | chr7_3:72241769-72241788 | None:intergenic | 30.0% |
| TGAAGGTGATAAGTATAAGA+TGG | + | chr7_3:72241924-72241943 | Msa1122040:CDS | 30.0% | |
| AGTATAAGATGGCAAAACAT+TGG | + | chr7_3:72241935-72241954 | Msa1122040:CDS | 30.0% | |
| GTATAAGATGGCAAAACATT+GGG | + | chr7_3:72241936-72241955 | Msa1122040:CDS | 30.0% | |
| TATAAGATGGCAAAACATTG+GGG | + | chr7_3:72241937-72241956 | Msa1122040:CDS | 30.0% | |
| TTAGTATTGTGACAATGACA+TGG | + | chr7_3:72241965-72241984 | Msa1122040:CDS | 30.0% | |
| ! | TGTTTAGTTCAAAACCCAAA+AGG | - | chr7_3:72242051-72242070 | None:intergenic | 30.0% |
| AAGCTTATCTTATGGTAACA+GGG | - | chr7_3:72242147-72242166 | None:intergenic | 30.0% | |
| !!! | GACTGGTTCGTATTTTTATT+TGG | + | chr7_3:72242171-72242190 | Msa1122040:intron | 30.0% |
| ATAGTCAGGAAAAGGATATT+GGG | + | chr7_3:72242279-72242298 | Msa1122040:CDS | 30.0% | |
| ! | AACTAGCTTATTTGAATCTG+CGG | - | chr7_3:72242333-72242352 | None:intergenic | 30.0% |
| TGGATCTTCATTTAAAGACT+TGG | - | chr7_3:72242363-72242382 | None:intergenic | 30.0% | |
| CAAGGAATTGAACTTTGATA+GGG | + | chr7_3:72242463-72242482 | Msa1122040:CDS | 30.0% | |
| GAATAGACTTACATTTCTGT+CGG | - | chr7_3:72242665-72242684 | None:intergenic | 30.0% | |
| !! | TCGTGCATTTGTATTTTTAC+AGG | + | chr7_3:72242874-72242893 | Msa1122040:intron | 30.0% |
| !! | CGTGCATTTGTATTTTTACA+GGG | + | chr7_3:72242875-72242894 | Msa1122040:intron | 30.0% |
| ! | ATATGCACTGTACTTTTGTA+GGG | - | chr7_3:72243000-72243019 | None:intergenic | 30.0% |
| !!! | TATGATCTTGTTTTCCCTAA+AGG | + | chr7_3:72243017-72243036 | Msa1122040:CDS | 30.0% |
| GTTCTTAAATTCAGGTAACT+TGG | + | chr7_3:72243164-72243183 | Msa1122040:intron | 30.0% | |
| GATACTGAAGTTGAAAATGA+TGG | + | chr7_3:72243222-72243241 | Msa1122040:CDS | 30.0% | |
| ! | GTCTAAATAAAGTACCACTA+GGG | - | chr7_3:72243274-72243293 | None:intergenic | 30.0% |
| ! | TGTCTAAATAAAGTACCACT+AGG | - | chr7_3:72243275-72243294 | None:intergenic | 30.0% |
| GAGATAAGAAGAAAAAAGAG+TGG | - | chr7_3:72243352-72243371 | None:intergenic | 30.0% | |
| TTTCTTCTTATCTCAAAGGA+CGG | + | chr7_3:72243358-72243377 | Msa1122040:intron | 30.0% | |
| ! | AACTAACCTTGTAATTTGTG+GGG | - | chr7_3:72243737-72243756 | None:intergenic | 30.0% |
| ! | GAACTAACCTTGTAATTTGT+GGG | - | chr7_3:72243738-72243757 | None:intergenic | 30.0% |
| TGAACTAACCTTGTAATTTG+TGG | - | chr7_3:72243739-72243758 | None:intergenic | 30.0% | |
| TCTGCTATATGAAAATTACC+TGG | - | chr7_3:72243853-72243872 | None:intergenic | 30.0% | |
| TATCTCATGTAACCCAAAAA+TGG | + | chr7_3:72243949-72243968 | Msa1122040:intron | 30.0% | |
| !! | GTGAATTTAACTCTAAAGCT+GGG | - | chr7_3:72244013-72244032 | None:intergenic | 30.0% |
| !! | TGTGAATTTAACTCTAAAGC+TGG | - | chr7_3:72244014-72244033 | None:intergenic | 30.0% |
| !!! | ATACTGGTCTTATGCTTTTT+AGG | + | chr7_3:72244080-72244099 | Msa1122040:intron | 30.0% |
| !!! | TACTGGTCTTATGCTTTTTA+GGG | + | chr7_3:72244081-72244100 | Msa1122040:intron | 30.0% |
| GATACGATATGTATCTGATA+CGG | + | chr7_3:72244327-72244346 | Msa1122040:three_prime_UTR | 30.0% | |
| AGATGTCGAAGTTATTTGAC+GGG | + | chr7_3:72237471-72237490 | Msa1122040:exon | 35.0% | |
| TGAATTTGATGCTGTTCACA+AGG | + | chr7_3:72237532-72237551 | Msa1122040:CDS | 35.0% | |
| !! | TGTTAGTGTTGTTTAGGTGT+CGG | + | chr7_3:72237851-72237870 | Msa1122040:intron | 35.0% |
| !! | TGTTAGTGTTGTTTAGGTGT+TGG | + | chr7_3:72237851-72237870 | Msa1122040:intron | 35.0% |
| ! | ATTTTTGCTTGAAGCGTGTA+TGG | - | chr7_3:72239111-72239130 | None:intergenic | 35.0% |
| ! | AAAGTGCAACAAAAGTGTGT+GGG | - | chr7_3:72239187-72239206 | None:intergenic | 35.0% |
| !!! | TACATTGATTTTCATAGCCG+AGG | + | chr7_3:72239344-72239363 | Msa1122040:intron | 35.0% |
| GTTCTTCAATGTGCTAAAGA+AGG | + | chr7_3:72239420-72239439 | Msa1122040:CDS | 35.0% | |
| TTCAATGTGCTAAAGAAGGA+AGG | + | chr7_3:72239424-72239443 | Msa1122040:CDS | 35.0% | |
| AACTTGCGAATATTGGAACA+TGG | - | chr7_3:72239553-72239572 | None:intergenic | 35.0% | |
| !!! | ATTCGCAAGTTGCTTTTTGA+AGG | + | chr7_3:72239562-72239581 | Msa1122040:intron | 35.0% |
| !!! | TTCGCAAGTTGCTTTTTGAA+GGG | + | chr7_3:72239563-72239582 | Msa1122040:intron | 35.0% |
| !!! | AGTTGCTTTTTGAAGGGTTT+TGG | + | chr7_3:72239569-72239588 | Msa1122040:intron | 35.0% |
| !!! | GAATTTTAGAGGGTTTTGGA+GGG | - | chr7_3:72239697-72239716 | None:intergenic | 35.0% |
| !! | AGAATTTTAGAGGGTTTTGG+AGG | - | chr7_3:72239698-72239717 | None:intergenic | 35.0% |
| GAATTAATGACTGAAATGGG+GGG | + | chr7_3:72239835-72239854 | Msa1122040:CDS | 35.0% | |
| TGGTTTATGTCCCAAATTGT+TGG | + | chr7_3:72240299-72240318 | Msa1122040:intron | 35.0% | |
| GGTTTATGTCCCAAATTGTT+GGG | + | chr7_3:72240300-72240319 | Msa1122040:intron | 35.0% | |
| GTTTATGTCCCAAATTGTTG+GGG | + | chr7_3:72240301-72240320 | Msa1122040:intron | 35.0% | |
| GTGGCTAATATGACTCTTAA+TGG | + | chr7_3:72240331-72240350 | Msa1122040:intron | 35.0% | |
| CTAATACACCGTGTTATGTT+TGG | + | chr7_3:72240568-72240587 | Msa1122040:intron | 35.0% | |
| TGTTCCACAAGAGTCATATA+AGG | + | chr7_3:72240668-72240687 | Msa1122040:CDS | 35.0% | |
| AGAACCTTATATGACTCTTG+TGG | - | chr7_3:72240675-72240694 | None:intergenic | 35.0% | |
| ! | TTCAACTTTTCCTTGAGAAG+AGG | + | chr7_3:72240964-72240983 | Msa1122040:intron | 35.0% |
| GGAAAATGTTAATGCAGACA+TGG | - | chr7_3:72241114-72241133 | None:intergenic | 35.0% | |
| !!! | ATCTGCATTTTGAGACTGTA+AGG | + | chr7_3:72241155-72241174 | Msa1122040:intron | 35.0% |
| TTACTGATAAGTGCGAACAA+GGG | - | chr7_3:72241184-72241203 | None:intergenic | 35.0% | |
| ATTACTGATAAGTGCGAACA+AGG | - | chr7_3:72241185-72241204 | None:intergenic | 35.0% | |
| ATGCATCAATACATCAAAGC+AGG | - | chr7_3:72241249-72241268 | None:intergenic | 35.0% | |
| ATCCTTATCTGTTAGACTGA+AGG | + | chr7_3:72241296-72241315 | Msa1122040:intron | 35.0% | |
| TCCTTATCTGTTAGACTGAA+GGG | + | chr7_3:72241297-72241316 | Msa1122040:intron | 35.0% | |
| GATTCACTTAGGCAAGAATT+CGG | + | chr7_3:72241460-72241479 | Msa1122040:intron | 35.0% | |
| ATTCACTTAGGCAAGAATTC+GGG | + | chr7_3:72241461-72241480 | Msa1122040:intron | 35.0% | |
| ! | TCTGAAGTGAAGTTTCTGAT+TGG | + | chr7_3:72241587-72241606 | Msa1122040:intron | 35.0% |
| ATAAGGGATACTAATCCCTA+AGG | - | chr7_3:72241752-72241771 | None:intergenic | 35.0% | |
| ! | CTGTTATTGAGGTTTGAAGT+TGG | + | chr7_3:72241867-72241886 | Msa1122040:intron | 35.0% |
| GATGAATCTATTGCTCAAAG+AGG | + | chr7_3:72241991-72242010 | Msa1122040:CDS | 35.0% | |
| ! | TGTATGTTGTGGTACCTTTT+GGG | + | chr7_3:72242034-72242053 | Msa1122040:intron | 35.0% |
| CAAGCTTATCTTATGGTAAC+AGG | - | chr7_3:72242148-72242167 | None:intergenic | 35.0% | |
| CTGTTACCATAAGATAAGCT+TGG | + | chr7_3:72242146-72242165 | Msa1122040:intron | 35.0% | |
| ATAAAGATCCACTCTGAACA+GGG | - | chr7_3:72242223-72242242 | None:intergenic | 35.0% | |
| TGGATCTTTATCTTCACGTA+AGG | + | chr7_3:72242232-72242251 | Msa1122040:CDS | 35.0% | |
| CATAGTCAGGAAAAGGATAT+TGG | + | chr7_3:72242278-72242297 | Msa1122040:CDS | 35.0% | |
| GATATTGGGATAATGCAATC+CGG | + | chr7_3:72242293-72242312 | Msa1122040:CDS | 35.0% | |
| !! | AATTCCTTGCTGGTCTTTAA+TGG | - | chr7_3:72242452-72242471 | None:intergenic | 35.0% |
| ATCAAAGTTCAATTCCTTGC+TGG | - | chr7_3:72242462-72242481 | None:intergenic | 35.0% | |
| GCAAGGAATTGAACTTTGAT+AGG | + | chr7_3:72242462-72242481 | Msa1122040:CDS | 35.0% | |
| ATTGAACTTTGATAGGGTTG+TGG | + | chr7_3:72242469-72242488 | Msa1122040:CDS | 35.0% | |
| !!! | TTGGTTTTGAAGCTTCTGAA+AGG | + | chr7_3:72242552-72242571 | Msa1122040:CDS | 35.0% |
| !!! | TGGTTTTGAAGCTTCTGAAA+GGG | + | chr7_3:72242553-72242572 | Msa1122040:CDS | 35.0% |
| TCTGAAAGGGATAAGCTAAT+TGG | + | chr7_3:72242566-72242585 | Msa1122040:CDS | 35.0% | |
| AAGGGATAAGCTAATTGGTA+TGG | + | chr7_3:72242571-72242590 | Msa1122040:CDS | 35.0% | |
| AAGTTGACACACATAGTAGT+TGG | + | chr7_3:72242635-72242654 | Msa1122040:CDS | 35.0% | |
| AGTTGACACACATAGTAGTT+GGG | + | chr7_3:72242636-72242655 | Msa1122040:CDS | 35.0% | |
| !! | TGTATTTTTACAGGGAAAGG+TGG | + | chr7_3:72242883-72242902 | Msa1122040:intron | 35.0% |
| !! | GTATTTTTACAGGGAAAGGT+GGG | + | chr7_3:72242884-72242903 | Msa1122040:intron | 35.0% |
| ATTACGCTGTTAAAACCTCA+TGG | + | chr7_3:72242937-72242956 | Msa1122040:CDS | 35.0% | |
| ! | CATATGCACTGTACTTTTGT+AGG | - | chr7_3:72243001-72243020 | None:intergenic | 35.0% |
| ATCATGATAGCACACCTTTA+GGG | - | chr7_3:72243034-72243053 | None:intergenic | 35.0% | |
| AATCATGATAGCACACCTTT+AGG | - | chr7_3:72243035-72243054 | None:intergenic | 35.0% | |
| !! | TGTGTTCTGTGTCTACTTTT+TGG | + | chr7_3:72243068-72243087 | Msa1122040:intron | 35.0% |
| TGCTTTAATTCATACCCTAG+TGG | + | chr7_3:72243257-72243276 | Msa1122040:CDS | 35.0% | |
| ! | ACTAACCTTGTAATTTGTGG+GGG | - | chr7_3:72243736-72243755 | None:intergenic | 35.0% |
| GGTGAATAGACTTATCTTAC+CGG | + | chr7_3:72243894-72243913 | Msa1122040:intron | 35.0% | |
| TCATGTAACCCAAAAATGGA+GGG | + | chr7_3:72243953-72243972 | Msa1122040:intron | 35.0% | |
| TTCGAGCTAATAATGCATAC+TGG | + | chr7_3:72244064-72244083 | Msa1122040:intron | 35.0% | |
| CATGTAACTCTTTCAGATTC+TGG | - | chr7_3:72244166-72244185 | None:intergenic | 35.0% | |
| CAGAATCTGAAAGAGTTACA+TGG | + | chr7_3:72244164-72244183 | Msa1122040:CDS | 35.0% | |
| ACATGGTTATCTGATCATTC+TGG | + | chr7_3:72244181-72244200 | Msa1122040:CDS | 35.0% | |
| ! | GTTATCTGATCATTCTGGAA+GGG | + | chr7_3:72244186-72244205 | Msa1122040:CDS | 35.0% |
| CGTCGTTTCTTAGAAAACAA+AGG | + | chr7_3:72244404-72244423 | Msa1122040:three_prime_UTR | 35.0% | |
| ATTCACCAGGTGGAAATAAG+TGG | - | chr7_3:72237517-72237536 | None:intergenic | 40.0% | |
| TGAACAGCATCAAATTCACC+AGG | - | chr7_3:72237530-72237549 | None:intergenic | 40.0% | |
| AACGGCTGTCAAGTTCATAT+CGG | + | chr7_3:72237566-72237585 | Msa1122040:CDS | 40.0% | |
| ! | ATAATCATTTTCGCCGTTGC+GGG | - | chr7_3:72237603-72237622 | None:intergenic | 40.0% |
| ! | GATAATCATTTTCGCCGTTG+CGG | - | chr7_3:72237604-72237623 | None:intergenic | 40.0% |
| AGAAATGACGTACGTGTTGA+CGG | - | chr7_3:72237640-72237659 | None:intergenic | 40.0% | |
| ! | GAAAGTGCAACAAAAGTGTG+TGG | - | chr7_3:72239188-72239207 | None:intergenic | 40.0% |
| AATTCTTCCCTCATATCACG+TGG | - | chr7_3:72239212-72239231 | None:intergenic | 40.0% | |
| ! | ACTGGACAATTAGAGCGTTT+AGG | + | chr7_3:72239258-72239277 | Msa1122040:intron | 40.0% |
| TGGCTGCGTTTGATTATATG+TGG | - | chr7_3:72239304-72239323 | None:intergenic | 40.0% | |
| ACTGCACATGTATATAGGTG+TGG | - | chr7_3:72239324-72239343 | None:intergenic | 40.0% | |
| AGCAAGTGAAGGTTTGTGTA+GGG | - | chr7_3:72239455-72239474 | None:intergenic | 40.0% | |
| CATAGTTAAGCAGCAAGTGA+AGG | - | chr7_3:72239466-72239485 | None:intergenic | 40.0% | |
| ! | CTTCACTTGCTGCTTAACTA+TGG | + | chr7_3:72239464-72239483 | Msa1122040:CDS | 40.0% |
| GAGAACAAATATAGGAAGGG+AGG | - | chr7_3:72239772-72239791 | None:intergenic | 40.0% | |
| TATTACTGTATGTGACCTGC+AGG | + | chr7_3:72239801-72239820 | Msa1122040:intron | 40.0% | |
| CCACAAATCCCCAACAATTT+GGG | - | chr7_3:72240312-72240331 | None:intergenic | 40.0% | |
| ACCACAAATCCCCAACAATT+TGG | - | chr7_3:72240313-72240332 | None:intergenic | 40.0% | |
| AAATTGTTGGGGATTTGTGG+TGG | + | chr7_3:72240312-72240331 | Msa1122040:intron | 40.0% | |
| TATAAGGTTCTTCCGTTCTC+TGG | + | chr7_3:72240684-72240703 | Msa1122040:CDS | 40.0% | |
| ATAAGGTTCTTCCGTTCTCT+GGG | + | chr7_3:72240685-72240704 | Msa1122040:CDS | 40.0% | |
| CAGATCTTTAACCCAGAGAA+CGG | - | chr7_3:72240699-72240718 | None:intergenic | 40.0% | |
| ! | GATTTTCTCTCCTCTTCTCA+AGG | - | chr7_3:72240977-72240996 | None:intergenic | 40.0% |
| !! | GTATTTCTAGCAGTCTGCAA+CGG | + | chr7_3:72241333-72241352 | Msa1122040:intron | 40.0% |
| ATGCTTTGACGCATGATACT+TGG | + | chr7_3:72241489-72241508 | Msa1122040:intron | 40.0% | |
| TCAGAAACTTCACTTCAGAC+TGG | - | chr7_3:72241586-72241605 | None:intergenic | 40.0% | |
| TAAAAACCTGTCTTCGCAAC+AGG | - | chr7_3:72241684-72241703 | None:intergenic | 40.0% | |
| TCTTCTATTGCACTGCCTTA+GGG | + | chr7_3:72241734-72241753 | Msa1122040:CDS | 40.0% | |
| CGCTTTAATGCTGTATGTTG+TGG | + | chr7_3:72242023-72242042 | Msa1122040:intron | 40.0% | |
| ! | CTGTATGTTGTGGTACCTTT+TGG | + | chr7_3:72242033-72242052 | Msa1122040:intron | 40.0% |
| AGTCAGCCAAGCTTATCTTA+TGG | - | chr7_3:72242155-72242174 | None:intergenic | 40.0% | |
| ATAAGATAAGCTTGGCTGAC+TGG | + | chr7_3:72242154-72242173 | Msa1122040:intron | 40.0% | |
| TTGGATAGCATGTCTGAATG+AGG | + | chr7_3:72242190-72242209 | Msa1122040:intron | 40.0% | |
| GATAAAGATCCACTCTGAAC+AGG | - | chr7_3:72242224-72242243 | None:intergenic | 40.0% | |
| TATCTTCACGTAAGGTGACT+AGG | + | chr7_3:72242240-72242259 | Msa1122040:CDS | 40.0% | |
| !! | CTTTTGACTGTGTAGCATCT+GGG | - | chr7_3:72242388-72242407 | None:intergenic | 40.0% |
| !! | TCTTTTGACTGTGTAGCATC+TGG | - | chr7_3:72242389-72242408 | None:intergenic | 40.0% |
| AGCATCTGCCTCTTTAACAT+CGG | - | chr7_3:72242420-72242439 | None:intergenic | 40.0% | |
| TGTGGCCAATGATTCTGAAT+CGG | + | chr7_3:72242487-72242506 | Msa1122040:CDS | 40.0% | |
| GTTGTCCGATTCAGAATCAT+TGG | - | chr7_3:72242495-72242514 | None:intergenic | 40.0% | |
| TTCTGCAGTCTGCTAAATAC+TGG | - | chr7_3:72242523-72242542 | None:intergenic | 40.0% | |
| GACTGCAGAATATCACTTGT+TGG | + | chr7_3:72242533-72242552 | Msa1122040:CDS | 40.0% | |
| CTAATTGGTATGGTGCGTAA+AGG | + | chr7_3:72242581-72242600 | Msa1122040:CDS | 40.0% | |
| GTATCAATGTAGACGATTCC+TGG | + | chr7_3:72242769-72242788 | Msa1122040:intron | 40.0% | |
| TGGGATATAGTGAGAACTGT+TGG | + | chr7_3:72242903-72242922 | Msa1122040:CDS | 40.0% | |
| ATAGTGAGAACTGTTGGTCA+AGG | + | chr7_3:72242909-72242928 | Msa1122040:CDS | 40.0% | |
| TGTTAAAACCTCATGGCTTG+AGG | + | chr7_3:72242944-72242963 | Msa1122040:CDS | 40.0% | |
| CTACATTGTTCTTTGCCTCT+CGG | - | chr7_3:72243203-72243222 | None:intergenic | 40.0% | |
| CATATTACCTTGATCACGAC+AGG | - | chr7_3:72243428-72243447 | None:intergenic | 40.0% | |
| CTGTCGTGATCAAGGTAATA+TGG | + | chr7_3:72243426-72243445 | Msa1122040:intron | 40.0% | |
| TACTCATTGTTCAGTCGTTG+TGG | + | chr7_3:72243535-72243554 | Msa1122040:intron | 40.0% | |
| TGAAACCCCCACAAATTACA+AGG | + | chr7_3:72243728-72243747 | Msa1122040:intron | 40.0% | |
| GCCACTGCTCATACTTTATT+CGG | + | chr7_3:72243764-72243783 | Msa1122040:intron | 40.0% | |
| TCCGAATAAAGTATGAGCAG+TGG | - | chr7_3:72243768-72243787 | None:intergenic | 40.0% | |
| CTCATGTAACCCAAAAATGG+AGG | + | chr7_3:72243952-72243971 | Msa1122040:intron | 40.0% | |
| !! | ACTCTAAAGCTGGGCAAAAA+AGG | - | chr7_3:72244004-72244023 | None:intergenic | 40.0% |
| AGATTCTGGATCTGATTCAC+TGG | - | chr7_3:72244152-72244171 | None:intergenic | 40.0% | |
| GGTTATCTGATCATTCTGGA+AGG | + | chr7_3:72244185-72244204 | Msa1122040:CDS | 40.0% | |
| CCAAAATGTGTTGTGATGCA+CGG | + | chr7_3:72244287-72244306 | Msa1122040:three_prime_UTR | 40.0% | |
| ACAGCATCAAATTCACCAGG+TGG | - | chr7_3:72237527-72237546 | None:intergenic | 45.0% | |
| CACAAGGTCGTTGAAGAGAA+CGG | + | chr7_3:72237548-72237567 | Msa1122040:CDS | 45.0% | |
| GGATTTGATCTTTCCCGCAA+CGG | + | chr7_3:72237587-72237606 | Msa1122040:CDS | 45.0% | |
| TCCAAAGGCTGCAAGATGAT+TGG | + | chr7_3:72237764-72237783 | Msa1122040:CDS | 45.0% | |
| ACCAATCATCTTGCAGCCTT+TGG | - | chr7_3:72237768-72237787 | None:intergenic | 45.0% | |
| CAAAAATGTCCGTCCTACTG+AGG | + | chr7_3:72239124-72239143 | Msa1122040:intron | 45.0% | |
| ACTTTCGCCACGTGATATGA+GGG | + | chr7_3:72239202-72239221 | Msa1122040:intron | 45.0% | |
| CAAGTGAAGGTTTGTGTAGG+GGG | - | chr7_3:72239453-72239472 | None:intergenic | 45.0% | |
| GCAAGTGAAGGTTTGTGTAG+GGG | - | chr7_3:72239454-72239473 | None:intergenic | 45.0% | |
| CAGCAAGTGAAGGTTTGTGT+AGG | - | chr7_3:72239456-72239475 | None:intergenic | 45.0% | |
| ! | CACTTGCTGCTTAACTATGG+AGG | + | chr7_3:72239467-72239486 | Msa1122040:CDS | 45.0% |
| GCTGTCAAAATACTCGCATG+TGG | + | chr7_3:72239489-72239508 | Msa1122040:CDS | 45.0% | |
| !! | TGGCTTTGATGCAGATCAGA+TGG | + | chr7_3:72239509-72239528 | Msa1122040:CDS | 45.0% |
| ATATAGGAAGGGAGGAGTGA+AGG | - | chr7_3:72239764-72239783 | None:intergenic | 45.0% | |
| !!! | TGTTTTGGCTCCAGAGTACA+AGG | + | chr7_3:72239909-72239928 | Msa1122040:CDS | 45.0% |
| CCCAAATTGTTGGGGATTTG+TGG | + | chr7_3:72240309-72240328 | Msa1122040:intron | 45.0% | |
| GTCCACTGCCAAACATAACA+CGG | - | chr7_3:72240579-72240598 | None:intergenic | 45.0% | |
| GGGTTAAAGATCTGTGTGAC+TGG | + | chr7_3:72240705-72240724 | Msa1122040:CDS | 45.0% | |
| GTGAAGCTGCAGGGAAAAAA+TGG | - | chr7_3:72241014-72241033 | None:intergenic | 45.0% | |
| GCCCTTCAGTCTAACAGATA+AGG | - | chr7_3:72241301-72241320 | None:intergenic | 45.0% | |
| ! | TTCAATTTTGCCGCCTAGTG+TGG | - | chr7_3:72241378-72241397 | None:intergenic | 45.0% |
| CTTTGACGCATGATACTTGG+TGG | + | chr7_3:72241492-72241511 | Msa1122040:intron | 45.0% | |
| AAGGCAGTGCAATAGAAGAC+AGG | - | chr7_3:72241733-72241752 | None:intergenic | 45.0% | |
| GTCTTCTATTGCACTGCCTT+AGG | + | chr7_3:72241733-72241752 | Msa1122040:CDS | 45.0% | |
| AGCGCAACATAGTCAGGAAA+AGG | + | chr7_3:72242271-72242290 | Msa1122040:CDS | 45.0% | |
| ATTTGAATCTGCGGCTCTTG+AGG | - | chr7_3:72242324-72242343 | None:intergenic | 45.0% | |
| CATCTGCCTCTTTAACATCG+GGG | - | chr7_3:72242418-72242437 | None:intergenic | 45.0% | |
| GCATCTGCCTCTTTAACATC+GGG | - | chr7_3:72242419-72242438 | None:intergenic | 45.0% | |
| ACCTCCATTAAAGACCAGCA+AGG | + | chr7_3:72242445-72242464 | Msa1122040:CDS | 45.0% | |
| !! | TCCTTGCTGGTCTTTAATGG+AGG | - | chr7_3:72242449-72242468 | None:intergenic | 45.0% |
| ATTGGTATGGTGCGTAAAGG+TGG | + | chr7_3:72242584-72242603 | Msa1122040:CDS | 45.0% | |
| TTGGTATGGTGCGTAAAGGT+GGG | + | chr7_3:72242585-72242604 | Msa1122040:CDS | 45.0% | |
| !!! | CAGGGACTCGTTTTTTTTCG+CGG | - | chr7_3:72242977-72242996 | None:intergenic | 45.0% |
| ! | CACTGTACTTTTGTAGGGCA+GGG | - | chr7_3:72242995-72243014 | None:intergenic | 45.0% |
| ACGGATGTGATATGTTCGCA+CGG | + | chr7_3:72243377-72243396 | Msa1122040:CDS | 45.0% | |
| TATGTTCGCACGGAAGAGAT+TGG | + | chr7_3:72243387-72243406 | Msa1122040:CDS | 45.0% | |
| AGTGTTTCCTGTCGTGATCA+AGG | + | chr7_3:72243418-72243437 | Msa1122040:CDS | 45.0% | |
| ATCTAAATCCACCTACTCCC+TGG | + | chr7_3:72243564-72243583 | Msa1122040:CDS | 45.0% | |
| TCTAAATCCACCTACTCCCT+GGG | + | chr7_3:72243565-72243584 | Msa1122040:CDS | 45.0% | |
| !! | CTTTATTCGGAGTACCGATG+TGG | + | chr7_3:72243777-72243796 | Msa1122040:intron | 45.0% |
| ACCAACCTGTTTGACCACAT+CGG | - | chr7_3:72243794-72243813 | None:intergenic | 45.0% | |
| TGTAACCCAAAAATGGAGGG+AGG | + | chr7_3:72243956-72243975 | Msa1122040:intron | 45.0% | |
| GTAACCCAAAAATGGAGGGA+GGG | + | chr7_3:72243957-72243976 | Msa1122040:intron | 45.0% | |
| TAACCCAAAAATGGAGGGAG+GGG | + | chr7_3:72243958-72243977 | Msa1122040:intron | 45.0% | |
| TGATTCACTGGAAGCTGCAT+AGG | - | chr7_3:72244140-72244159 | None:intergenic | 45.0% | |
| ! | CCGTGCATCACAACACATTT+TGG | - | chr7_3:72244290-72244309 | None:intergenic | 45.0% |
| ATGTGTTGTGATGCACGGAT+AGG | + | chr7_3:72244292-72244311 | Msa1122040:three_prime_UTR | 45.0% | |
| CTGTATCATGGACACCAGAC+CGG | - | chr7_3:72239150-72239169 | None:intergenic | 50.0% | |
| CACTTTCGCCACGTGATATG+AGG | + | chr7_3:72239201-72239220 | Msa1122040:intron | 50.0% | |
| CTGAGGAACAACAGCTACCT+CGG | - | chr7_3:72239364-72239383 | None:intergenic | 50.0% | |
| ! | ATGTACCAGGCCTTGTACTC+TGG | - | chr7_3:72239922-72239941 | None:intergenic | 50.0% |
| CACCGTGTTATGTTTGGCAG+TGG | + | chr7_3:72240574-72240593 | Msa1122040:intron | 50.0% | |
| TGTGTGACTGGAATCCAAGC+AGG | + | chr7_3:72240717-72240736 | Msa1122040:CDS | 50.0% | |
| GCACTTCTTCGTCAGTTCTG+CGG | - | chr7_3:72240872-72240891 | None:intergenic | 50.0% | |
| AGTGAACCTGTTGCGAAGAC+AGG | + | chr7_3:72241675-72241694 | Msa1122040:intron | 50.0% | |
| GACTGTTCTTACGCTGCTGA+AGG | + | chr7_3:72241907-72241926 | Msa1122040:CDS | 50.0% | |
| AGATCCACTCTGAACAGGGT+AGG | - | chr7_3:72242219-72242238 | None:intergenic | 50.0% | |
| CTCAACAGCGCAACATAGTC+AGG | + | chr7_3:72242265-72242284 | Msa1122040:CDS | 50.0% | |
| TCCAGTCCCCGATGTTAAAG+AGG | + | chr7_3:72242409-72242428 | Msa1122040:CDS | 50.0% | |
| TGGTATGGTGCGTAAAGGTG+GGG | + | chr7_3:72242586-72242605 | Msa1122040:CDS | 50.0% | |
| ! | GCACTGTACTTTTGTAGGGC+AGG | - | chr7_3:72242996-72243015 | None:intergenic | 50.0% |
| CTAAATCCACCTACTCCCTG+GGG | + | chr7_3:72243566-72243585 | Msa1122040:CDS | 50.0% | |
| !! | GAGTACCGATGTGGTCAAAC+AGG | + | chr7_3:72243786-72243805 | Msa1122040:intron | 50.0% |
| ACCGATGTGGTCAAACAGGT+TGG | + | chr7_3:72243790-72243809 | Msa1122040:intron | 50.0% | |
| !! | GATCCCCTCCCTCCATTTTT+GGG | - | chr7_3:72243964-72243983 | None:intergenic | 50.0% |
| ! | TGATCCCCTCCCTCCATTTT+TGG | - | chr7_3:72243965-72243984 | None:intergenic | 50.0% |
| GACTTCTCGAGATCGAAGAG+CGG | + | chr7_3:72244111-72244130 | Msa1122040:CDS | 50.0% | |
| ACTTCTCGAGATCGAAGAGC+GGG | + | chr7_3:72244112-72244131 | Msa1122040:CDS | 50.0% | |
| AGAGGGTTGAGTTTCACTGC+TGG | - | chr7_3:72244252-72244271 | None:intergenic | 50.0% | |
| TCGCGCCACTTATTTCCACC+TGG | + | chr7_3:72237509-72237528 | Msa1122040:CDS | 55.0% | |
| AATGTCCGTCCTACTGAGGC+CGG | + | chr7_3:72239128-72239147 | Msa1122040:intron | 55.0% | |
| GTGAAGGTTTGTGTAGGGGG+AGG | - | chr7_3:72239450-72239469 | None:intergenic | 55.0% | |
| CAGCTGACAGTGAAGCTGCA+GGG | - | chr7_3:72241023-72241042 | None:intergenic | 55.0% | |
| GAGTCCTACCCTGTTCAGAG+TGG | + | chr7_3:72242212-72242231 | Msa1122040:CDS | 55.0% | |
| TGCGGCTCTTGAGGATGAAC+CGG | - | chr7_3:72242315-72242334 | None:intergenic | 55.0% | |
| ! | GACTGTGTAGCATCTGGGAC+TGG | - | chr7_3:72242383-72242402 | None:intergenic | 55.0% |
| GCCTCTTTAACATCGGGGAC+TGG | - | chr7_3:72242413-72242432 | None:intergenic | 55.0% | |
| GGTATGGTGCGTAAAGGTGG+GGG | + | chr7_3:72242587-72242606 | Msa1122040:CDS | 55.0% | |
| GTCACAGTCCTCAAGCCATG+AGG | - | chr7_3:72242955-72242974 | None:intergenic | 55.0% | |
| GGACACTACTCAAGACCGAG+AGG | + | chr7_3:72243185-72243204 | Msa1122040:CDS | 55.0% | |
| ATCCTCATCCTGGCGGTCAT+TGG | + | chr7_3:72243594-72243613 | Msa1122040:CDS | 55.0% | |
| CTTCTCGAGATCGAAGAGCG+GGG | + | chr7_3:72244113-72244132 | Msa1122040:CDS | 55.0% | |
| ! | GAAGGGATGCGCTTCTAGAG+AGG | + | chr7_3:72244203-72244222 | Msa1122040:CDS | 55.0% |
| GGTGCACATTCGTTCGCAGA+GGG | - | chr7_3:72244269-72244288 | None:intergenic | 55.0% | |
| TGGTGCACATTCGTTCGCAG+AGG | - | chr7_3:72244270-72244289 | None:intergenic | 55.0% | |
| TGGCTCCAGAGTACAAGGCC+TGG | + | chr7_3:72239914-72239933 | Msa1122040:intron | 60.0% | |
| GCAGCTGACAGTGAAGCTGC+AGG | - | chr7_3:72241024-72241043 | None:intergenic | 60.0% | |
| GGATGAGGATCTGGACCCCA+GGG | - | chr7_3:72243584-72243603 | None:intergenic | 60.0% | |
| AGGATGAGGATCTGGACCCC+AGG | - | chr7_3:72243585-72243604 | None:intergenic | 60.0% | |
| TGGGGTCCAGATCCTCATCC+TGG | + | chr7_3:72243584-72243603 | Msa1122040:CDS | 60.0% | |
| GGTCCAGATCCTCATCCTGG+CGG | + | chr7_3:72243587-72243606 | Msa1122040:CDS | 60.0% | |
| TGACCGCCAGGATGAGGATC+TGG | - | chr7_3:72243593-72243612 | None:intergenic | 60.0% | |
| CTCATCCTGGCGGTCATTGG+CGG | + | chr7_3:72243597-72243616 | Msa1122040:CDS | 60.0% | |
| CCAGACCGGCCTCAGTAGGA+CGG | - | chr7_3:72239136-72239155 | None:intergenic | 65.0% | |
| GACACCAGACCGGCCTCAGT+AGG | - | chr7_3:72239140-72239159 | None:intergenic | 65.0% | |
| TCTGGACCCCAGGGAGTAGG+TGG | - | chr7_3:72243575-72243594 | None:intergenic | 65.0% | |
| GGATCTGGACCCCAGGGAGT+AGG | - | chr7_3:72243578-72243597 | None:intergenic | 65.0% | |
| CGCCAATGACCGCCAGGATG+AGG | - | chr7_3:72243599-72243618 | None:intergenic | 65.0% | |
| CATCTCCGCCAATGACCGCC+AGG | - | chr7_3:72243605-72243624 | None:intergenic | 65.0% | |
| CTGGCGGTCATTGGCGGAGA+TGG | + | chr7_3:72243603-72243622 | Msa1122040:CDS | 65.0% | |
| CCGTCCTACTGAGGCCGGTC+TGG | + | chr7_3:72239133-72239152 | Msa1122040:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 72237459 | 72244465 | 72237459 | ID=Msa1122040;Name=Msa1122040 |
| chr7_3 | mRNA | 72237459 | 72244465 | 72237459 | ID=Msa1122040-mRNA-1;Parent=Msa1122040;Name=Msa1122040-mRNA-1;_AED=0.10;_eAED=0.10;_QI=14|0.76|0.64|0.92|1|1|14|207|626 |
| chr7_3 | exon | 72237459 | 72237646 | 72237459 | ID=Msa1122040-mRNA-1:exon:18696;Parent=Msa1122040-mRNA-1 |
| chr7_3 | exon | 72237743 | 72237785 | 72237743 | ID=Msa1122040-mRNA-1:exon:18697;Parent=Msa1122040-mRNA-1 |
| chr7_3 | exon | 72239409 | 72239530 | 72239409 | ID=Msa1122040-mRNA-1:exon:18698;Parent=Msa1122040-mRNA-1 |
| chr7_3 | exon | 72239823 | 72239930 | 72239823 | ID=Msa1122040-mRNA-1:exon:18699;Parent=Msa1122040-mRNA-1 |
| chr7_3 | exon | 72240594 | 72240738 | 72240594 | ID=Msa1122040-mRNA-1:exon:18700;Parent=Msa1122040-mRNA-1 |
| chr7_3 | exon | 72241384 | 72241448 | 72241384 | ID=Msa1122040-mRNA-1:exon:18701;Parent=Msa1122040-mRNA-1 |
| chr7_3 | exon | 72241727 | 72241792 | 72241727 | ID=Msa1122040-mRNA-1:exon:18702;Parent=Msa1122040-mRNA-1 |
| chr7_3 | exon | 72241886 | 72242012 | 72241886 | ID=Msa1122040-mRNA-1:exon:18703;Parent=Msa1122040-mRNA-1 |
| chr7_3 | exon | 72242198 | 72242672 | 72242198 | ID=Msa1122040-mRNA-1:exon:18704;Parent=Msa1122040-mRNA-1 |
| chr7_3 | exon | 72242896 | 72243038 | 72242896 | ID=Msa1122040-mRNA-1:exon:18705;Parent=Msa1122040-mRNA-1 |
| chr7_3 | exon | 72243178 | 72243278 | 72243178 | ID=Msa1122040-mRNA-1:exon:18706;Parent=Msa1122040-mRNA-1 |
| chr7_3 | exon | 72243376 | 72243439 | 72243376 | ID=Msa1122040-mRNA-1:exon:18707;Parent=Msa1122040-mRNA-1 |
| chr7_3 | exon | 72243549 | 72243639 | 72243549 | ID=Msa1122040-mRNA-1:exon:18708;Parent=Msa1122040-mRNA-1 |
| chr7_3 | exon | 72244102 | 72244465 | 72244102 | ID=Msa1122040-mRNA-1:exon:18709;Parent=Msa1122040-mRNA-1 |
| chr7_3 | five_prime_UTR | 72237459 | 72237472 | 72237459 | ID=Msa1122040-mRNA-1:five_prime_utr;Parent=Msa1122040-mRNA-1 |
| chr7_3 | CDS | 72237473 | 72237646 | 72237473 | ID=Msa1122040-mRNA-1:cds;Parent=Msa1122040-mRNA-1 |
| chr7_3 | CDS | 72237743 | 72237785 | 72237743 | ID=Msa1122040-mRNA-1:cds;Parent=Msa1122040-mRNA-1 |
| chr7_3 | CDS | 72239409 | 72239530 | 72239409 | ID=Msa1122040-mRNA-1:cds;Parent=Msa1122040-mRNA-1 |
| chr7_3 | CDS | 72239823 | 72239930 | 72239823 | ID=Msa1122040-mRNA-1:cds;Parent=Msa1122040-mRNA-1 |
| chr7_3 | CDS | 72240594 | 72240738 | 72240594 | ID=Msa1122040-mRNA-1:cds;Parent=Msa1122040-mRNA-1 |
| chr7_3 | CDS | 72241384 | 72241448 | 72241384 | ID=Msa1122040-mRNA-1:cds;Parent=Msa1122040-mRNA-1 |
| chr7_3 | CDS | 72241727 | 72241792 | 72241727 | ID=Msa1122040-mRNA-1:cds;Parent=Msa1122040-mRNA-1 |
| chr7_3 | CDS | 72241886 | 72242012 | 72241886 | ID=Msa1122040-mRNA-1:cds;Parent=Msa1122040-mRNA-1 |
| chr7_3 | CDS | 72242198 | 72242672 | 72242198 | ID=Msa1122040-mRNA-1:cds;Parent=Msa1122040-mRNA-1 |
| chr7_3 | CDS | 72242896 | 72243038 | 72242896 | ID=Msa1122040-mRNA-1:cds;Parent=Msa1122040-mRNA-1 |
| chr7_3 | CDS | 72243178 | 72243278 | 72243178 | ID=Msa1122040-mRNA-1:cds;Parent=Msa1122040-mRNA-1 |
| chr7_3 | CDS | 72243376 | 72243439 | 72243376 | ID=Msa1122040-mRNA-1:cds;Parent=Msa1122040-mRNA-1 |
| chr7_3 | CDS | 72243549 | 72243639 | 72243549 | ID=Msa1122040-mRNA-1:cds;Parent=Msa1122040-mRNA-1 |
| chr7_3 | CDS | 72244102 | 72244258 | 72244102 | ID=Msa1122040-mRNA-1:cds;Parent=Msa1122040-mRNA-1 |
| chr7_3 | three_prime_UTR | 72244259 | 72244465 | 72244259 | ID=Msa1122040-mRNA-1:three_prime_utr;Parent=Msa1122040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
