AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1160130

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1160130 MtrunA17_Chr7g0256731 98.952 477 5 0 1 477 1 477 0.0 990
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1160130 AT4G33030.1 77.339 481 101 4 1 477 1 477 0.0 751

Find 151 sgRNAs with CRISPR-Local

Find 244 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGACTATGATGCAATATT+TGG 0.140392 7_4:-49891915 Msa1160130:CDS
CTGATGCTGTTGTCCATTTC+GGG 0.173565 7_4:-49892331 Msa1160130:CDS
ATTACTCGCTTCGGTTTAAA+AGG 0.187741 7_4:+49892611 None:intergenic
CCTTCCTCAATATCAATATT+TGG 0.201469 7_4:+49892149 None:intergenic
CCTGATGCTGTTGTCCATTT+CGG 0.263402 7_4:-49892332 Msa1160130:CDS
CTGAATCAAGGAGTGGTATA+TGG 0.263921 7_4:-49891984 Msa1160130:CDS
CCAAAGATCTATTCTACATT+AGG 0.286556 7_4:+49890200 None:intergenic
CGCAAGAAAAGCCGTCTAAA+TGG 0.294684 7_4:+49892725 None:intergenic
AGCTTTCACTTGCAAAGCTT+GGG 0.304992 7_4:-49892024 Msa1160130:CDS
GGTCATCCTCTCACTGTATA+TGG 0.330521 7_4:-49891855 Msa1160130:CDS
AAATTATGCCTGGTGTTTCT+TGG 0.333741 7_4:-49890411 Msa1160130:CDS
TGCAAGTGAAAGCTATGTTA+TGG 0.335168 7_4:+49892033 None:intergenic
GAGCTAGCTTGCTTTGGATA+TGG 0.338990 7_4:+49892086 None:intergenic
GTGTTTCTTGGAGAAAGGTT+GGG 0.344780 7_4:-49890399 Msa1160130:CDS
TTTGACTAACATGTGGGTTC+TGG 0.344905 7_4:+49893609 None:intergenic
AAGCCGTCTAAATGGAGTTT+TGG 0.349474 7_4:+49892733 None:intergenic
TGCATGAAGAGTTGTGTAAC+AGG 0.360759 7_4:-49891938 Msa1160130:CDS
TGATTCACTGCTTAACTTTG+CGG 0.361307 7_4:-49890464 Msa1160130:CDS
TTTCGATAACAAGTATCAAT+TGG 0.367609 7_4:+49893662 None:intergenic
GCCCCGGTTCAAACTAGTTC+TGG 0.371819 7_4:-49892638 Msa1160130:CDS
TTCGATAACAAGTATCAATT+GGG 0.371914 7_4:+49893663 None:intergenic
CTCATAGGACTTGAAGGTTT+CGG 0.374096 7_4:+49892355 None:intergenic
TCAAATATTGCATTGTAGAA+AGG 0.378528 7_4:-49893638 Msa1160130:five_prime_UTR
CCTAATGTAGAATAGATCTT+TGG 0.382224 7_4:-49890200 Msa1160130:three_prime_UTR
CGATCCTGGATGGAGGAAAT+TGG 0.387488 7_4:+49892455 None:intergenic
TAACCCTAGAGTGGAGTTAG+AGG 0.392922 7_4:-49890563 Msa1160130:CDS
GCAAGTGAAAGCTATGTTAT+GGG 0.394552 7_4:+49892034 None:intergenic
TCTAGGGTTAGGCACTGATA+TGG 0.398330 7_4:+49890576 None:intergenic
AACACTAAACTAGTTGATCT+TGG 0.398824 7_4:-49890520 Msa1160130:CDS
TAAAATGAGCTAGCTTGCTT+TGG 0.399512 7_4:+49892080 None:intergenic
TCCAACACTGAATGCGATCC+TGG 0.403609 7_4:+49892441 None:intergenic
TTGAAGACTCGGAACTCTCC+AGG 0.404275 7_4:+49890682 None:intergenic
CAAATATTGCATTGTAGAAA+GGG 0.404609 7_4:-49893637 Msa1160130:five_prime_UTR
GGTGTTTCTTGGAGAAAGGT+TGG 0.408948 7_4:-49890400 Msa1160130:CDS
TAGCTTTCACTTGCAAAGCT+TGG 0.414968 7_4:-49892025 Msa1160130:CDS
CAGATCGCTGTTCCCCGAAA+TGG 0.418112 7_4:+49892318 None:intergenic
ATTGAATCGGTTCTGTGTTC+AGG 0.420146 7_4:-49891886 Msa1160130:CDS
CACTGATATTATATTACAAA+TGG 0.423072 7_4:+49890113 None:intergenic
ACAGAAACCAAGGAAAAGTT+TGG 0.427205 7_4:-49892699 Msa1160130:CDS
CAAAGATCTATTCTACATTA+GGG 0.432678 7_4:+49890201 None:intergenic
CCGAAATGGACAACAGCATC+AGG 0.432925 7_4:+49892332 None:intergenic
CGGAACTCTCCAGGGTTAGC+CGG 0.438324 7_4:+49890691 None:intergenic
TTCATCCTAAGGTGTGTGCT+TGG 0.443590 7_4:-49890359 Msa1160130:exon
ATCAGGCTCATAGGACTTGA+AGG 0.444397 7_4:+49892349 None:intergenic
TGAATCAAGGAGTGGTATAT+GGG 0.446459 7_4:-49891983 Msa1160130:CDS
CTAGTCAAGCTTGGGACAAT+GGG 0.448728 7_4:-49892185 Msa1160130:CDS
TTCTGTGTTCAGGCTGCTGT+TGG 0.451203 7_4:-49891876 Msa1160130:CDS
CCTCGTAACCTTTGTTAGAA+AGG 0.451936 7_4:+49892543 None:intergenic
CCAATGACCATTACTCGCTT+CGG 0.452722 7_4:+49892602 None:intergenic
GATGTTGAGCATTGGTGAAA+AGG 0.453224 7_4:+49892785 None:intergenic
TATTCTACATTAGGGTATGA+AGG 0.453997 7_4:+49890209 None:intergenic
TGTTTCTTGGAGAAAGGTTG+GGG 0.454574 7_4:-49890398 Msa1160130:CDS
TAAGGTGTGTGCTTGGCTGC+TGG 0.457236 7_4:-49890352 Msa1160130:three_prime_UTR
GCCTGGTGTTTCTTGGAGAA+AGG 0.462195 7_4:-49890404 Msa1160130:CDS
AATGCTTCTACAGTTTCAAC+TGG 0.463746 7_4:-49892668 Msa1160130:CDS
TCGCCAGAACTAGTTTGAAC+CGG 0.465526 7_4:+49892635 None:intergenic
TACGAAAGCTGGTGAGAAGT+TGG 0.467785 7_4:-49890614 Msa1160130:CDS
AATTAGAGTGAAGAGTGAAA+TGG 0.473105 7_4:+49893585 None:intergenic
CTTGGGACAATGGGTGAATA+CGG 0.477903 7_4:-49892176 Msa1160130:CDS
GCTGAGCTTGTTACGAAAGC+TGG 0.488739 7_4:-49890625 Msa1160130:CDS
ACGAAAGCTGGTGAGAAGTT+GGG 0.489003 7_4:-49890613 Msa1160130:CDS
CAGTGTTGGAAATCTCTCAC+TGG 0.491751 7_4:-49892428 Msa1160130:CDS
TATTTGGAACTGCATTGAAT+CGG 0.493431 7_4:-49891899 Msa1160130:CDS
GACAACAGCATCAGGCTCAT+AGG 0.494062 7_4:+49892340 None:intergenic
CAGTAAATTGATTGAAGACT+CGG 0.495401 7_4:+49890671 None:intergenic
CCTCTCACTGTATATGGTAA+AGG 0.496285 7_4:-49891849 Msa1160130:CDS
CCGAAGCGAGTAATGGTCAT+TGG 0.499010 7_4:-49892602 Msa1160130:CDS
CACAGCAAAACAATGTTGTC+GGG 0.499040 7_4:-49892256 Msa1160130:CDS
AACGTGTTTGAAGTAGTTAG+AGG 0.499079 7_4:-49892888 Msa1160130:five_prime_UTR
CACACCAATTTCCTCCATCC+AGG 0.500313 7_4:-49892459 Msa1160130:CDS
CGCCAGAACTAGTTTGAACC+GGG 0.501193 7_4:+49892636 None:intergenic
GTGATTAGATTGTGCTGCAT+TGG 0.503162 7_4:-49890298 Msa1160130:three_prime_UTR
AACCTTTGTTAGAAAGGTGG+AGG 0.503426 7_4:+49892549 None:intergenic
AAGTATCAATTGGGGTCCAT+AGG 0.506490 7_4:+49893672 None:intergenic
GGAACTCTCCAGGGTTAGCC+GGG 0.506813 7_4:+49890692 None:intergenic
AGAGAGAGACAAAGAAGAGA+AGG 0.507714 7_4:-49893700 Msa1160130:five_prime_UTR
TTGCGGTTCAGTACAAAGAC+CGG 0.508555 7_4:-49890447 Msa1160130:CDS
ATTGTCATCTAGTCAAGCTT+GGG 0.509144 7_4:-49892193 Msa1160130:CDS
CCAAATATTGATATTGAGGA+AGG 0.509151 7_4:-49892149 Msa1160130:CDS
GACCGGTCTATCATAGAGTA+AGG 0.509269 7_4:+49892293 None:intergenic
AACTCCAAATATTGATATTG+AGG 0.510539 7_4:-49892153 Msa1160130:CDS
AGAGGAACCTCTGATCGAAA+TGG 0.511790 7_4:-49892870 Msa1160130:exon
GTAATGGTCATTGGTGGAGA+TGG 0.511804 7_4:-49892593 Msa1160130:CDS
TCTAGTCAAGCTTGGGACAA+TGG 0.511865 7_4:-49892186 Msa1160130:CDS
GATTGTCATCTAGTCAAGCT+TGG 0.511909 7_4:-49892194 Msa1160130:CDS
TGAGCTTGCCATTGCAAACC+CGG 0.515121 7_4:-49890710 Msa1160130:CDS
TTCAACTGGCAAGGAAGCCC+CGG 0.520139 7_4:-49892654 Msa1160130:CDS
TGCTCCTCTAACTCCACTCT+AGG 0.523420 7_4:+49890559 None:intergenic
CTCCTTACTCTATGATAGAC+CGG 0.525170 7_4:-49892295 Msa1160130:CDS
CTCAGATAAAATTCAATCAA+AGG 0.529979 7_4:+49889981 None:intergenic
TTACTCGCTTCGGTTTAAAA+GGG 0.531134 7_4:+49892612 None:intergenic
ATTGCAAACCCGGCTAACCC+TGG 0.532722 7_4:-49890700 Msa1160130:CDS
GTGTATACACAGCTCTTGAC+CGG 0.533184 7_4:+49892276 None:intergenic
CACAAGTGTCATAATTATGT+AGG 0.534036 7_4:+49890318 None:intergenic
ACACAGCAAAACAATGTTGT+CGG 0.535211 7_4:-49892257 Msa1160130:CDS
TGTATATGGTAAAGGAGGCC+AGG 0.535491 7_4:-49891841 Msa1160130:intron
AGAAGAGAAGGATATTCCTA+TGG 0.536082 7_4:-49893688 Msa1160130:five_prime_UTR
CGGGCAACTGATCTGAATCA+AGG 0.540528 7_4:-49891996 Msa1160130:CDS
TGGAGATGGATACTGTGGTT+GGG 0.542951 7_4:-49892579 Msa1160130:CDS
AGCAGCCAAGCACACACCTT+AGG 0.544690 7_4:+49890354 None:intergenic
AATTGAGCCATTTCGATCAG+AGG 0.547123 7_4:+49892863 None:intergenic
GACACTAAGCAAATTATGCC+TGG 0.547893 7_4:-49890421 Msa1160130:CDS
TAAACAAGGTTTGTTTGAAG+CGG 0.550343 7_4:+49892811 None:intergenic
GCTTTCACTTGCAAAGCTTG+GGG 0.550528 7_4:-49892023 Msa1160130:CDS
ACTCCAAAACTCCATTTAGA+CGG 0.553484 7_4:-49892736 Msa1160130:CDS
TTCTACAGTTTCAACTGGCA+AGG 0.556783 7_4:-49892663 Msa1160130:CDS
GTGGAGATGGATACTGTGGT+TGG 0.563462 7_4:-49892580 Msa1160130:CDS
ACACTGAATGCGATCCTGGA+TGG 0.563966 7_4:+49892445 None:intergenic
GCTCCTCTAACTCCACTCTA+GGG 0.565035 7_4:+49890560 None:intergenic
TCCAGGATCGCATTCAGTGT+TGG 0.567073 7_4:-49892442 Msa1160130:CDS
TGTCCTTCCGTTGTGAGTGA+TGG 0.571830 7_4:+49892118 None:intergenic
AGGGTTAGCCGGGTTTGCAA+TGG 0.573221 7_4:+49890702 None:intergenic
TCGAGTCATATGTGTACGTA+GGG 0.578072 7_4:-49890158 Msa1160130:three_prime_UTR
CGTAACCTTTGTTAGAAAGG+TGG 0.578750 7_4:+49892546 None:intergenic
AAAAGTATTGAGCTATACAT+TGG 0.580925 7_4:-49892404 Msa1160130:CDS
TAGAAAATGATGTTGAGCAT+TGG 0.583068 7_4:+49892777 None:intergenic
AAGCGAGTAATGGTCATTGG+TGG 0.585308 7_4:-49892599 Msa1160130:CDS
TCTAACTCCACTCTAGGGTT+AGG 0.586318 7_4:+49890565 None:intergenic
AGTGTTGGAAATCTCTCACT+GGG 0.586597 7_4:-49892427 Msa1160130:CDS
CCTTTCTAACAAAGGTTACG+AGG 0.587127 7_4:-49892543 Msa1160130:CDS
TGAAGACTCGGAACTCTCCA+GGG 0.596954 7_4:+49890683 None:intergenic
GTTTGAAGCGGAGAAAGTCA+AGG 0.597796 7_4:+49892823 None:intergenic
CTTTCACTTGCAAAGCTTGG+GGG 0.598323 7_4:-49892022 Msa1160130:CDS
CTCACTGTATATGGTAAAGG+AGG 0.599269 7_4:-49891846 Msa1160130:CDS
TGAGAGAATCTAGTCCAAGC+TGG 0.600491 7_4:+49892480 None:intergenic
GCCCTCCACCTTTCTAACAA+AGG 0.602875 7_4:-49892551 Msa1160130:CDS
TGTATCTCTTATGTCAAGGA+AGG 0.605182 7_4:+49890744 None:intergenic
GAACTGTATCTCTTATGTCA+AGG 0.608223 7_4:+49890740 None:intergenic
CCTTTACCATATACAGTGAG+AGG 0.609431 7_4:+49891849 None:intergenic
ATCAGTGCCTAACCCTAGAG+TGG 0.611638 7_4:-49890572 Msa1160130:CDS
ACCTTTGTTAGAAAGGTGGA+GGG 0.612052 7_4:+49892550 None:intergenic
AGAGAATCTGAAAGAAAGTG+TGG 0.612228 7_4:+49890490 None:intergenic
TCGAACAAGGTTGTCAACAA+TGG 0.614328 7_4:+49892517 None:intergenic
TGATGCTGTTGTCCATTTCG+GGG 0.617432 7_4:-49892330 Msa1160130:CDS
TTACCATCACTCACAACGGA+AGG 0.617927 7_4:-49892121 Msa1160130:CDS
CTGAATGCGATCCTGGATGG+AGG 0.618262 7_4:+49892448 None:intergenic
TGCGGTTCAGTACAAAGACC+GGG 0.625601 7_4:-49890446 Msa1160130:CDS
TCTTGCGAGAACAGAAACCA+AGG 0.641034 7_4:-49892709 Msa1160130:CDS
ACCTTTCTCCAAGAAACACC+AGG 0.645278 7_4:+49890403 None:intergenic
TCGATAACAAGTATCAATTG+GGG 0.647703 7_4:+49893664 None:intergenic
TAATTTGCTTAGTGTCAACC+CGG 0.652985 7_4:+49890428 None:intergenic
AAATGGATTTGACTAACATG+TGG 0.655005 7_4:+49893602 None:intergenic
GAATCAAGGAGTGGTATATG+GGG 0.664294 7_4:-49891982 Msa1160130:CDS
AACTGATCTGAATCAAGGAG+TGG 0.668884 7_4:-49891991 Msa1160130:CDS
AATGGATTTGACTAACATGT+GGG 0.670680 7_4:+49893603 None:intergenic
ATTGGTGGAGATGGATACTG+TGG 0.674313 7_4:-49892584 Msa1160130:CDS
CTACGTACACATATGACTCG+AGG 0.675868 7_4:+49890160 None:intergenic
CTCGAGTCATATGTGTACGT+AGG 0.678012 7_4:-49890159 Msa1160130:three_prime_UTR
TATATTACCATCACTCACAA+CGG 0.680492 7_4:-49892125 Msa1160130:CDS
GCCAGAACTAGTTTGAACCG+GGG 0.700751 7_4:+49892637 None:intergenic
TGCTATAAAAGAGTACAGAG+AGG 0.711022 7_4:-49892216 Msa1160130:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAGCTTTATTTTAAATTAA+TGG - chr7_4:49890393-49890412 Msa1160130:CDS 10.0%
!!! TTAAAAAAATATTTTTTGTG+TGG - chr7_4:49892550-49892569 Msa1160130:CDS 10.0%
!!! AAAAAAAATGTGTTATTAAT+AGG - chr7_4:49892582-49892601 Msa1160130:CDS 10.0%
!! AATTCTAGATAAATTTGATT+TGG - chr7_4:49890417-49890436 Msa1160130:CDS 15.0%
!! TATCAATAAGAAATAAACAA+GGG + chr7_4:49891904-49891923 None:intergenic 15.0%
!! TTATCAATAAGAAATAAACA+AGG + chr7_4:49891905-49891924 None:intergenic 15.0%
!!! TTTTTTGAATTTTTCAAACT+TGG - chr7_4:49891969-49891988 Msa1160130:CDS 15.0%
!! TATGCTTAATAAGTTAATAA+TGG + chr7_4:49892147-49892166 None:intergenic 15.0%
!! TTATTGTTTAAATTACTTCT+TGG - chr7_4:49892725-49892744 Msa1160130:CDS 15.0%
!!! ATACTTCATTTTCTTTATGT+GGG - chr7_4:49890304-49890323 Msa1160130:three_prime_UTR 20.0%
!!! TGATCATTATCAATTTTGTA+GGG + chr7_4:49890550-49890569 None:intergenic 20.0%
!!! ATGATCATTATCAATTTTGT+AGG + chr7_4:49890551-49890570 None:intergenic 20.0%
!! TGTGAATAAAAATCAACATA+AGG + chr7_4:49890615-49890634 None:intergenic 20.0%
!!! AAATTATTAGTCTTTGCTTT+TGG - chr7_4:49890664-49890683 Msa1160130:CDS 20.0%
!! CTGAAACAATAATTAAAATC+CGG + chr7_4:49890798-49890817 None:intergenic 20.0%
!! ATTATAAAATGTATTCTACG+AGG + chr7_4:49892103-49892122 None:intergenic 20.0%
!!! TTTTCTTTTAGACACAATTT+TGG + chr7_4:49892180-49892199 None:intergenic 20.0%
!! AATCTATGCACATAAAAAAA+GGG + chr7_4:49892377-49892396 None:intergenic 20.0%
!! CATATAGCAAAATAAATGTA+AGG - chr7_4:49892614-49892633 Msa1160130:CDS 20.0%
!!! GAAAAATTTGTTAATGGAAA+TGG - chr7_4:49892843-49892862 Msa1160130:CDS 20.0%
!! ACATGCAAAAAATTAATTAC+TGG + chr7_4:49892911-49892930 None:intergenic 20.0%
!! CACTGATATTATATTACAAA+TGG + chr7_4:49893597-49893616 None:intergenic 20.0%
! TTCGATAACAAGTATCAATT+GGG + chr7_4:49890047-49890066 None:intergenic 25.0%
! TTTCGATAACAAGTATCAAT+TGG + chr7_4:49890048-49890067 None:intergenic 25.0%
! TCAAATATTGCATTGTAGAA+AGG - chr7_4:49890069-49890088 Msa1160130:three_prime_UTR 25.0%
! CAAATATTGCATTGTAGAAA+GGG - chr7_4:49890070-49890089 Msa1160130:three_prime_UTR 25.0%
! TTCATAAAATTGTGCAAACA+TGG + chr7_4:49890221-49890240 None:intergenic 25.0%
!! TTTGCACAATTTTATGAAGT+GGG - chr7_4:49890223-49890242 Msa1160130:three_prime_UTR 25.0%
!! CATACTTCATTTTCTTTATG+TGG - chr7_4:49890303-49890322 Msa1160130:three_prime_UTR 25.0%
!! GATTCTGAAAATCAACAAAA+AGG + chr7_4:49890336-49890355 None:intergenic 25.0%
! GGTAATTTCAGTAAAAAGAA+AGG - chr7_4:49890471-49890490 Msa1160130:CDS 25.0%
! AGACTAATAATTTCATCATC+AGG + chr7_4:49890657-49890676 None:intergenic 25.0%
! TTGTTCTTGATATACAAAGA+TGG - chr7_4:49890691-49890710 Msa1160130:CDS 25.0%
!!! CGGATTTTAATTATTGTTTC+AGG - chr7_4:49890796-49890815 Msa1160130:intron 25.0%
!!! AAAAGTATTGAGCTATACAT+TGG - chr7_4:49891303-49891322 Msa1160130:intron 25.0%
! AACTCCAAATATTGATATTG+AGG - chr7_4:49891554-49891573 Msa1160130:intron 25.0%
!! CTCATTTTATCATTTAAGCA+AGG - chr7_4:49891641-49891660 Msa1160130:intron 25.0%
! TTTGACTATGATGCAATATT+TGG - chr7_4:49891792-49891811 Msa1160130:intron 25.0%
! ATAAGAAATAAACAAGGGAT+TGG + chr7_4:49891899-49891918 None:intergenic 25.0%
!! AAAATCTATGATTTTGCCAT+TGG + chr7_4:49891953-49891972 None:intergenic 25.0%
!!! AGAATTAAAGAGTATTGGTT+AGG - chr7_4:49892016-49892035 Msa1160130:CDS 25.0%
!! TCATATTTTCTGCAGTTATA+TGG + chr7_4:49892333-49892352 None:intergenic 25.0%
! TATAACTGCAGAAAATATGA+TGG - chr7_4:49892333-49892352 Msa1160130:CDS 25.0%
! GAATCTATGCACATAAAAAA+AGG + chr7_4:49892378-49892397 None:intergenic 25.0%
! ATAGTCAGCATATTCAATAT+GGG - chr7_4:49892748-49892767 Msa1160130:CDS 25.0%
! TATTACCGTGAAATTCAATA+TGG - chr7_4:49892775-49892794 Msa1160130:CDS 25.0%
! CTAAACCATATTGAATTTCA+CGG + chr7_4:49892783-49892802 None:intergenic 25.0%
!!! GATGCTGAAAAATTTGTTAA+TGG - chr7_4:49892837-49892856 Msa1160130:CDS 25.0%
!! GCTTTTGTATACTATAATCT+CGG - chr7_4:49893460-49893479 Msa1160130:intron 25.0%
!! CTTTTGTATACTATAATCTC+GGG - chr7_4:49893461-49893480 Msa1160130:intron 25.0%
! CAAAGATCTATTCTACATTA+GGG + chr7_4:49893509-49893528 None:intergenic 25.0%
! CTCAGATAAAATTCAATCAA+AGG + chr7_4:49893729-49893748 None:intergenic 25.0%
TCGATAACAAGTATCAATTG+GGG + chr7_4:49890046-49890065 None:intergenic 30.0%
! AATGGATTTGACTAACATGT+GGG + chr7_4:49890107-49890126 None:intergenic 30.0%
! AAATGGATTTGACTAACATG+TGG + chr7_4:49890108-49890127 None:intergenic 30.0%
AATTAGAGTGAAGAGTGAAA+TGG + chr7_4:49890125-49890144 None:intergenic 30.0%
! AGGATATAGGTTGAAAAAGA+GGG + chr7_4:49890171-49890190 None:intergenic 30.0%
! AAGGATATAGGTTGAAAAAG+AGG + chr7_4:49890172-49890191 None:intergenic 30.0%
ATTCAAGTGAAGAAGGATAT+AGG + chr7_4:49890184-49890203 None:intergenic 30.0%
! GTTTGCACAATTTTATGAAG+TGG - chr7_4:49890222-49890241 Msa1160130:three_prime_UTR 30.0%
TCAGAATCATTACTTGTGTT+TGG - chr7_4:49890348-49890367 Msa1160130:three_prime_UTR 30.0%
CAGAATCATTACTTGTGTTT+GGG - chr7_4:49890349-49890368 Msa1160130:three_prime_UTR 30.0%
!! TGGTTAAAATTGTTCTGAAG+TGG - chr7_4:49890437-49890456 Msa1160130:CDS 30.0%
!! AAAATTGTTCTGAAGTGGTT+AGG - chr7_4:49890442-49890461 Msa1160130:CDS 30.0%
CAGTAAAAAGAAAGGAAAAG+AGG - chr7_4:49890479-49890498 Msa1160130:CDS 30.0%
GGAAAAGAGGTAATGAAAAA+TGG - chr7_4:49890492-49890511 Msa1160130:CDS 30.0%
! TAAACAAGGTTTGTTTGAAG+CGG + chr7_4:49890899-49890918 None:intergenic 30.0%
!!! TGGTGAAAAGGTTTTAAACA+AGG + chr7_4:49890913-49890932 None:intergenic 30.0%
TAGAAAATGATGTTGAGCAT+TGG + chr7_4:49890933-49890952 None:intergenic 30.0%
! CTCAACATCATTTTCTAACA+CGG - chr7_4:49890936-49890955 Msa1160130:intron 30.0%
CCTTCCTCAATATCAATATT+TGG + chr7_4:49891561-49891580 None:intergenic 30.0%
CCAAATATTGATATTGAGGA+AGG - chr7_4:49891558-49891577 Msa1160130:intron 30.0%
TATATTACCATCACTCACAA+CGG - chr7_4:49891582-49891601 Msa1160130:intron 30.0%
! TATTTGGAACTGCATTGAAT+CGG - chr7_4:49891808-49891827 Msa1160130:intron 30.0%
! TTTAGACACAATTTTGGATC+AGG + chr7_4:49892174-49892193 None:intergenic 30.0%
GTCTAAAAGAAAAACTGCTA+AGG - chr7_4:49892187-49892206 Msa1160130:CDS 30.0%
GATAGTCAGCATATTCAATA+TGG - chr7_4:49892747-49892766 Msa1160130:CDS 30.0%
ATGAGATTTACATACGAACA+TGG - chr7_4:49892812-49892831 Msa1160130:CDS 30.0%
CAGTAAATTGATTGAAGACT+CGG + chr7_4:49893039-49893058 None:intergenic 30.0%
AACACTAAACTAGTTGATCT+TGG - chr7_4:49893187-49893206 Msa1160130:intron 30.0%
ACAAAAACTCTTTCATCCTA+AGG - chr7_4:49893337-49893356 Msa1160130:intron 30.0%
CACAAGTGTCATAATTATGT+AGG + chr7_4:49893392-49893411 None:intergenic 30.0%
TATTCTACATTAGGGTATGA+AGG + chr7_4:49893501-49893520 None:intergenic 30.0%
CCAAAGATCTATTCTACATT+AGG + chr7_4:49893510-49893529 None:intergenic 30.0%
CCTAATGTAGAATAGATCTT+TGG - chr7_4:49893507-49893526 Msa1160130:intron 30.0%
AGAAGAGAAGGATATTCCTA+TGG - chr7_4:49890019-49890038 Msa1160130:three_prime_UTR 35.0%
! TCTAATTTTGCATTCTCTCC+AGG - chr7_4:49890138-49890157 Msa1160130:three_prime_UTR 35.0%
CAGAACAATTCAAGTGAAGA+AGG + chr7_4:49890191-49890210 None:intergenic 35.0%
! ACAATTTTATGAAGTGGGCA+TGG - chr7_4:49890228-49890247 Msa1160130:three_prime_UTR 35.0%
! AGAGTCTTTTGAGCATGTAA+AGG - chr7_4:49890265-49890284 Msa1160130:three_prime_UTR 35.0%
AATCATTACTTGTGTTTGGG+TGG - chr7_4:49890352-49890371 Msa1160130:three_prime_UTR 35.0%
!! TTTGGGTGGATTGTTGTTAT+TGG - chr7_4:49890366-49890385 Msa1160130:exon 35.0%
TGAAGTGAAATGCAAATGAC+CGG - chr7_4:49890776-49890795 Msa1160130:intron 35.0%
! AACGTGTTTGAAGTAGTTAG+AGG - chr7_4:49890819-49890838 Msa1160130:intron 35.0%
ACTCCAAAACTCCATTTAGA+CGG - chr7_4:49890971-49890990 Msa1160130:intron 35.0%
ACAGAAACCAAGGAAAAGTT+TGG - chr7_4:49891008-49891027 Msa1160130:intron 35.0%
AATGCTTCTACAGTTTCAAC+TGG - chr7_4:49891039-49891058 Msa1160130:intron 35.0%
TTACTCGCTTCGGTTTAAAA+GGG + chr7_4:49891098-49891117 None:intergenic 35.0%
ATTACTCGCTTCGGTTTAAA+AGG + chr7_4:49891099-49891118 None:intergenic 35.0%
! TTTTAAACCGAAGCGAGTAA+TGG - chr7_4:49891098-49891117 Msa1160130:intron 35.0%
ACACAGCAAAACAATGTTGT+CGG - chr7_4:49891450-49891469 Msa1160130:intron 35.0%
! TGCTATAAAAGAGTACAGAG+AGG - chr7_4:49891491-49891510 Msa1160130:intron 35.0%
ATTGTCATCTAGTCAAGCTT+GGG - chr7_4:49891514-49891533 Msa1160130:intron 35.0%
!! TAAAATGAGCTAGCTTGCTT+TGG + chr7_4:49891630-49891649 None:intergenic 35.0%
GCAAGTGAAAGCTATGTTAT+GGG + chr7_4:49891676-49891695 None:intergenic 35.0%
TGCAAGTGAAAGCTATGTTA+TGG + chr7_4:49891677-49891696 None:intergenic 35.0%
TGAATCAAGGAGTGGTATAT+GGG - chr7_4:49891724-49891743 Msa1160130:intron 35.0%
GGATGTGTTTATGTCATTAC+TGG - chr7_4:49891990-49892009 Msa1160130:CDS 35.0%
! GGTGCAGAATTAAAGAGTAT+TGG - chr7_4:49892011-49892030 Msa1160130:CDS 35.0%
CAATAGAGTAGTACCTCAAA+TGG - chr7_4:49892428-49892447 Msa1160130:CDS 35.0%
GAGACAAAAAACTCCATTTG+AGG + chr7_4:49892444-49892463 None:intergenic 35.0%
!!! TCTTCGCCTAAAGTTTTGAA+GGG + chr7_4:49892669-49892688 None:intergenic 35.0%
!! ATCTTCGCCTAAAGTTTTGA+AGG + chr7_4:49892670-49892689 None:intergenic 35.0%
AGATTTACATACGAACATGG+TGG - chr7_4:49892815-49892834 Msa1160130:CDS 35.0%
TGATTCACATGTTTCAGACT+AGG - chr7_4:49892939-49892958 Msa1160130:intron 35.0%
GATTCACATGTTTCAGACTA+GGG - chr7_4:49892940-49892959 Msa1160130:intron 35.0%
TGTATCTCTTATGTCAAGGA+AGG + chr7_4:49892966-49892985 None:intergenic 35.0%
GAACTGTATCTCTTATGTCA+AGG + chr7_4:49892970-49892989 None:intergenic 35.0%
! CTGATATGGTTTTCACATCA+AGG + chr7_4:49893120-49893139 None:intergenic 35.0%
AGAGAATCTGAAAGAAAGTG+TGG + chr7_4:49893220-49893239 None:intergenic 35.0%
TGATTCACTGCTTAACTTTG+CGG - chr7_4:49893243-49893262 Msa1160130:intron 35.0%
!! TAATTTGCTTAGTGTCAACC+CGG + chr7_4:49893282-49893301 None:intergenic 35.0%
AAATTATGCCTGGTGTTTCT+TGG - chr7_4:49893296-49893315 Msa1160130:intron 35.0%
AGAGAGAGACAAAGAAGAGA+AGG - chr7_4:49890007-49890026 Msa1160130:three_prime_UTR 40.0%
AAGTATCAATTGGGGTCCAT+AGG + chr7_4:49890038-49890057 None:intergenic 40.0%
TTTGACTAACATGTGGGTTC+TGG + chr7_4:49890101-49890120 None:intergenic 40.0%
GAAAAAGAGGGTAACTAACC+TGG + chr7_4:49890159-49890178 None:intergenic 40.0%
!! TGTTCTGAAGTGGTTAGGAA+TGG - chr7_4:49890447-49890466 Msa1160130:CDS 40.0%
AATTGAGCCATTTCGATCAG+AGG + chr7_4:49890847-49890866 None:intergenic 40.0%
!! GATGTTGAGCATTGGTGAAA+AGG + chr7_4:49890925-49890944 None:intergenic 40.0%
! AAGCCGTCTAAATGGAGTTT+TGG + chr7_4:49890977-49890996 None:intergenic 40.0%
! ACAACTGCCAAACTTTTCCT+TGG + chr7_4:49891018-49891037 None:intergenic 40.0%
TTCTACAGTTTCAACTGGCA+AGG - chr7_4:49891044-49891063 Msa1160130:intron 40.0%
ACCTTTGTTAGAAAGGTGGA+GGG + chr7_4:49891160-49891179 None:intergenic 40.0%
AACCTTTGTTAGAAAGGTGG+AGG + chr7_4:49891161-49891180 None:intergenic 40.0%
CGTAACCTTTGTTAGAAAGG+TGG + chr7_4:49891164-49891183 None:intergenic 40.0%
CCTCGTAACCTTTGTTAGAA+AGG + chr7_4:49891167-49891186 None:intergenic 40.0%
CCTTTCTAACAAAGGTTACG+AGG - chr7_4:49891164-49891183 Msa1160130:intron 40.0%
TCGAACAAGGTTGTCAACAA+TGG + chr7_4:49891193-49891212 None:intergenic 40.0%
GATCAAAAAGACGTCGAACA+AGG + chr7_4:49891206-49891225 None:intergenic 40.0%
! AGTGTTGGAAATCTCTCACT+GGG - chr7_4:49891280-49891299 Msa1160130:intron 40.0%
CTCATAGGACTTGAAGGTTT+CGG + chr7_4:49891355-49891374 None:intergenic 40.0%
CTCCTTACTCTATGATAGAC+CGG - chr7_4:49891412-49891431 Msa1160130:intron 40.0%
CACAGCAAAACAATGTTGTC+GGG - chr7_4:49891451-49891470 Msa1160130:intron 40.0%
GATTGTCATCTAGTCAAGCT+TGG - chr7_4:49891513-49891532 Msa1160130:intron 40.0%
TAGCTTTCACTTGCAAAGCT+TGG - chr7_4:49891682-49891701 Msa1160130:intron 40.0%
AGCTTTCACTTGCAAAGCTT+GGG - chr7_4:49891683-49891702 Msa1160130:intron 40.0%
AACTGATCTGAATCAAGGAG+TGG - chr7_4:49891716-49891735 Msa1160130:intron 40.0%
CTGAATCAAGGAGTGGTATA+TGG - chr7_4:49891723-49891742 Msa1160130:intron 40.0%
GAATCAAGGAGTGGTATATG+GGG - chr7_4:49891725-49891744 Msa1160130:intron 40.0%
TGCATGAAGAGTTGTGTAAC+AGG - chr7_4:49891769-49891788 Msa1160130:intron 40.0%
! ATTGAATCGGTTCTGTGTTC+AGG - chr7_4:49891821-49891840 Msa1160130:intron 40.0%
CCTTTACCATATACAGTGAG+AGG + chr7_4:49891861-49891880 None:intergenic 40.0%
CCTCTCACTGTATATGGTAA+AGG - chr7_4:49891858-49891877 Msa1160130:CDS 40.0%
CTCACTGTATATGGTAAAGG+AGG - chr7_4:49891861-49891880 Msa1160130:CDS 40.0%
AGAACAGTGACTGTTTCCAA+TGG - chr7_4:49891934-49891953 Msa1160130:CDS 40.0%
!! GTATTGGTTAGGCTTCTTAG+TGG - chr7_4:49892027-49892046 Msa1160130:CDS 40.0%
ATGGAAGTAAATGTCAACGC+AGG + chr7_4:49892128-49892147 None:intergenic 40.0%
AGGCTTGATCTTCGATGAAT+AGG - chr7_4:49892634-49892653 Msa1160130:CDS 40.0%
GACACTAAGCAAATTATGCC+TGG - chr7_4:49893286-49893305 Msa1160130:intron 40.0%
GTGTTTCTTGGAGAAAGGTT+GGG - chr7_4:49893308-49893327 Msa1160130:intron 40.0%
TGTTTCTTGGAGAAAGGTTG+GGG - chr7_4:49893309-49893328 Msa1160130:intron 40.0%
GTGATTAGATTGTGCTGCAT+TGG - chr7_4:49893409-49893428 Msa1160130:intron 40.0%
TCGAGTCATATGTGTACGTA+GGG - chr7_4:49893549-49893568 Msa1160130:intron 40.0%
! TCTGAAGTGGTTAGGAATGG+AGG - chr7_4:49890450-49890469 Msa1160130:CDS 45.0%
!! AACAGACGCGCTTTGAGAAA+TGG + chr7_4:49890592-49890611 None:intergenic 45.0%
AGAGGAACCTCTGATCGAAA+TGG - chr7_4:49890837-49890856 Msa1160130:intron 45.0%
! GTTTGAAGCGGAGAAAGTCA+AGG + chr7_4:49890887-49890906 None:intergenic 45.0%
CGCAAGAAAAGCCGTCTAAA+TGG + chr7_4:49890985-49891004 None:intergenic 45.0%
TCTTGCGAGAACAGAAACCA+AGG - chr7_4:49890998-49891017 Msa1160130:intron 45.0%
! TCGCCAGAACTAGTTTGAAC+CGG + chr7_4:49891075-49891094 None:intergenic 45.0%
CCAATGACCATTACTCGCTT+CGG + chr7_4:49891108-49891127 None:intergenic 45.0%
AAGCGAGTAATGGTCATTGG+TGG - chr7_4:49891108-49891127 Msa1160130:intron 45.0%
GTAATGGTCATTGGTGGAGA+TGG - chr7_4:49891114-49891133 Msa1160130:intron 45.0%
ATTGGTGGAGATGGATACTG+TGG - chr7_4:49891123-49891142 Msa1160130:intron 45.0%
TGGAGATGGATACTGTGGTT+GGG - chr7_4:49891128-49891147 Msa1160130:intron 45.0%
! CGTCTTTTTGATCACCAGCT+TGG - chr7_4:49891213-49891232 Msa1160130:intron 45.0%
TGAGAGAATCTAGTCCAAGC+TGG + chr7_4:49891230-49891249 None:intergenic 45.0%
! CAGTGTTGGAAATCTCTCAC+TGG - chr7_4:49891279-49891298 Msa1160130:intron 45.0%
ATCAGGCTCATAGGACTTGA+AGG + chr7_4:49891361-49891380 None:intergenic 45.0%
CCTGATGCTGTTGTCCATTT+CGG - chr7_4:49891375-49891394 Msa1160130:intron 45.0%
CTGATGCTGTTGTCCATTTC+GGG - chr7_4:49891376-49891395 Msa1160130:intron 45.0%
TGATGCTGTTGTCCATTTCG+GGG - chr7_4:49891377-49891396 Msa1160130:intron 45.0%
GACCGGTCTATCATAGAGTA+AGG + chr7_4:49891417-49891436 None:intergenic 45.0%
GTGTATACACAGCTCTTGAC+CGG + chr7_4:49891434-49891453 None:intergenic 45.0%
TCTAGTCAAGCTTGGGACAA+TGG - chr7_4:49891521-49891540 Msa1160130:intron 45.0%
CTAGTCAAGCTTGGGACAAT+GGG - chr7_4:49891522-49891541 Msa1160130:intron 45.0%
CTTGGGACAATGGGTGAATA+CGG - chr7_4:49891531-49891550 Msa1160130:intron 45.0%
TTACCATCACTCACAACGGA+AGG - chr7_4:49891586-49891605 Msa1160130:intron 45.0%
!! GAGCTAGCTTGCTTTGGATA+TGG + chr7_4:49891624-49891643 None:intergenic 45.0%
GCTTTCACTTGCAAAGCTTG+GGG - chr7_4:49891684-49891703 Msa1160130:intron 45.0%
CTTTCACTTGCAAAGCTTGG+GGG - chr7_4:49891685-49891704 Msa1160130:intron 45.0%
GGTCATCCTCTCACTGTATA+TGG - chr7_4:49891852-49891871 Msa1160130:CDS 45.0%
TGTATATGGTAAAGGAGGCC+AGG - chr7_4:49891866-49891885 Msa1160130:CDS 45.0%
! CAAGGGATTGGTATGTTACC+TGG + chr7_4:49891887-49891906 None:intergenic 45.0%
CGCGTACCCTTCAAAACTTT+AGG - chr7_4:49892660-49892679 Msa1160130:CDS 45.0%
GGCGACTACTAGTGTATAGA+TGG - chr7_4:49892864-49892883 Msa1160130:exon 45.0%
TACGAAAGCTGGTGAGAAGT+TGG - chr7_4:49893093-49893112 Msa1160130:intron 45.0%
ACGAAAGCTGGTGAGAAGTT+GGG - chr7_4:49893094-49893113 Msa1160130:intron 45.0%
!! TCTAGGGTTAGGCACTGATA+TGG + chr7_4:49893134-49893153 None:intergenic 45.0%
!! TCTAACTCCACTCTAGGGTT+AGG + chr7_4:49893145-49893164 None:intergenic 45.0%
TAACCCTAGAGTGGAGTTAG+AGG - chr7_4:49893144-49893163 Msa1160130:intron 45.0%
TTGCGGTTCAGTACAAAGAC+CGG - chr7_4:49893260-49893279 Msa1160130:intron 45.0%
ACCTTTCTCCAAGAAACACC+AGG + chr7_4:49893307-49893326 None:intergenic 45.0%
GGTGTTTCTTGGAGAAAGGT+TGG - chr7_4:49893307-49893326 Msa1160130:intron 45.0%
TTCATCCTAAGGTGTGTGCT+TGG - chr7_4:49893348-49893367 Msa1160130:intron 45.0%
CTACGTACACATATGACTCG+AGG + chr7_4:49893550-49893569 None:intergenic 45.0%
CTCGAGTCATATGTGTACGT+AGG - chr7_4:49893548-49893567 Msa1160130:intron 45.0%
! GCCAGAACTAGTTTGAACCG+GGG + chr7_4:49891073-49891092 None:intergenic 50.0%
! CGCCAGAACTAGTTTGAACC+GGG + chr7_4:49891074-49891093 None:intergenic 50.0%
CCGAAGCGAGTAATGGTCAT+TGG - chr7_4:49891105-49891124 Msa1160130:intron 50.0%
GTGGAGATGGATACTGTGGT+TGG - chr7_4:49891127-49891146 Msa1160130:intron 50.0%
GCCCTCCACCTTTCTAACAA+AGG - chr7_4:49891156-49891175 Msa1160130:intron 50.0%
CACACCAATTTCCTCCATCC+AGG - chr7_4:49891248-49891267 Msa1160130:intron 50.0%
CGATCCTGGATGGAGGAAAT+TGG + chr7_4:49891255-49891274 None:intergenic 50.0%
ACACTGAATGCGATCCTGGA+TGG + chr7_4:49891265-49891284 None:intergenic 50.0%
TCCAGGATCGCATTCAGTGT+TGG - chr7_4:49891265-49891284 Msa1160130:intron 50.0%
TCCAACACTGAATGCGATCC+TGG + chr7_4:49891269-49891288 None:intergenic 50.0%
GACAACAGCATCAGGCTCAT+AGG + chr7_4:49891370-49891389 None:intergenic 50.0%
CCGAAATGGACAACAGCATC+AGG + chr7_4:49891378-49891397 None:intergenic 50.0%
TGTCCTTCCGTTGTGAGTGA+TGG + chr7_4:49891592-49891611 None:intergenic 50.0%
CTTGCAAAGCTTGGGGGATT+CGG - chr7_4:49891691-49891710 Msa1160130:intron 50.0%
TTGCAAAGCTTGGGGGATTC+GGG - chr7_4:49891692-49891711 Msa1160130:intron 50.0%
CGGGCAACTGATCTGAATCA+AGG - chr7_4:49891711-49891730 Msa1160130:intron 50.0%
TTCTGTGTTCAGGCTGCTGT+TGG - chr7_4:49891831-49891850 Msa1160130:intron 50.0%
TGAGCTTGCCATTGCAAACC+CGG - chr7_4:49892997-49893016 Msa1160130:intron 50.0%
TGAAGACTCGGAACTCTCCA+GGG + chr7_4:49893027-49893046 None:intergenic 50.0%
TTGAAGACTCGGAACTCTCC+AGG + chr7_4:49893028-49893047 None:intergenic 50.0%
!! GCTGAGCTTGTTACGAAAGC+TGG - chr7_4:49893082-49893101 Msa1160130:intron 50.0%
ATCAGTGCCTAACCCTAGAG+TGG - chr7_4:49893135-49893154 Msa1160130:intron 50.0%
GCTCCTCTAACTCCACTCTA+GGG + chr7_4:49893150-49893169 None:intergenic 50.0%
TGCTCCTCTAACTCCACTCT+AGG + chr7_4:49893151-49893170 None:intergenic 50.0%
TGCGGTTCAGTACAAAGACC+GGG - chr7_4:49893261-49893280 Msa1160130:intron 50.0%
GCCTGGTGTTTCTTGGAGAA+AGG - chr7_4:49893303-49893322 Msa1160130:intron 50.0%
TTCAACTGGCAAGGAAGCCC+CGG - chr7_4:49891053-49891072 Msa1160130:intron 55.0%
GCCCCGGTTCAAACTAGTTC+TGG - chr7_4:49891069-49891088 Msa1160130:intron 55.0%
CTGAATGCGATCCTGGATGG+AGG + chr7_4:49891262-49891281 None:intergenic 55.0%
CAGATCGCTGTTCCCCGAAA+TGG + chr7_4:49891392-49891411 None:intergenic 55.0%
!! AGGGTTAGCCGGGTTTGCAA+TGG + chr7_4:49893008-49893027 None:intergenic 55.0%
ATTGCAAACCCGGCTAACCC+TGG - chr7_4:49893007-49893026 Msa1160130:intron 55.0%
AGCAGCCAAGCACACACCTT+AGG + chr7_4:49893356-49893375 None:intergenic 55.0%
TAAGGTGTGTGCTTGGCTGC+TGG - chr7_4:49893355-49893374 Msa1160130:intron 55.0%
!! GGAACTCTCCAGGGTTAGCC+GGG + chr7_4:49893018-49893037 None:intergenic 60.0%
! CGGAACTCTCCAGGGTTAGC+CGG + chr7_4:49893019-49893038 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 49889981 49893748 49889981 ID=Msa1160130;Name=Msa1160130
chr7_4 mRNA 49889981 49893748 49889981 ID=Msa1160130-mRNA-1;Parent=Msa1160130;Name=Msa1160130-mRNA-1;_AED=0.20;_eAED=0.20;_QI=217|1|1|1|0.5|0.33|3|391|477
chr7_4 exon 49889981 49890773 49889981 ID=Msa1160130-mRNA-1:exon:13854;Parent=Msa1160130-mRNA-1
chr7_4 exon 49891842 49892911 49891842 ID=Msa1160130-mRNA-1:exon:13853;Parent=Msa1160130-mRNA-1
chr7_4 exon 49893570 49893748 49893570 ID=Msa1160130-mRNA-1:exon:13852;Parent=Msa1160130-mRNA-1
chr7_4 five_prime_UTR 49893570 49893748 49893570 ID=Msa1160130-mRNA-1:five_prime_utr;Parent=Msa1160130-mRNA-1
chr7_4 five_prime_UTR 49892874 49892911 49892874 ID=Msa1160130-mRNA-1:five_prime_utr;Parent=Msa1160130-mRNA-1
chr7_4 CDS 49891842 49892873 49891842 ID=Msa1160130-mRNA-1:cds;Parent=Msa1160130-mRNA-1
chr7_4 CDS 49890372 49890773 49890372 ID=Msa1160130-mRNA-1:cds;Parent=Msa1160130-mRNA-1
chr7_4 three_prime_UTR 49889981 49890371 49889981 ID=Msa1160130-mRNA-1:three_prime_utr;Parent=Msa1160130-mRNA-1
Gene Sequence

>Msa1160130

ATGGCTCAATTGCTATCATCTTCTTGCTCCTTGACTTTCTCCGCTTCAAACAAACCTTGTTTAAAACCTTTTCACCAATGCTCAACATCATTTTCTAACACGGTTGTTTTTGATAACTCCAAAACTCCATTTAGACGGCTTTTCTTGCGAGAACAGAAACCAAGGAAAAGTTTGGCAGTTGTAAATGCTTCTACAGTTTCAACTGGCAAGGAAGCCCCGGTTCAAACTAGTTCTGGCGACCCTTTTAAACCGAAGCGAGTAATGGTCATTGGTGGAGATGGATACTGTGGTTGGGCAACTGCCCTCCACCTTTCTAACAAAGGTTACGAGGTTGCCATTGTTGACAACCTTGTTCGACGTCTTTTTGATCACCAGCTTGGACTAGATTCTCTCACACCAATTTCCTCCATCCAGGATCGCATTCAGTGTTGGAAATCTCTCACTGGGAAAAGTATTGAGCTATACATTGGTGATATATGTGAGTTTGAGTTCTTATCCGAAACCTTCAAGTCCTATGAGCCTGATGCTGTTGTCCATTTCGGGGAACAGCGATCTGCTCCTTACTCTATGATAGACCGGTCAAGAGCTGTGTATACACAGCAAAACAATGTTGTCGGGACACTGAACGTGCTCTTTGCTATAAAAGAGTACAGAGAGGATTGTCATCTAGTCAAGCTTGGGACAATGGGTGAATACGGAACTCCAAATATTGATATTGAGGAAGGTTATATTACCATCACTCACAACGGAAGGACAGACACTTTGCCATATCCAAAGCAAGCTAGCTCATTTTATCATTTAAGCAAGGTACATGATTCCCATAACATAGCTTTCACTTGCAAAGCTTGGGGGATTCGGGCAACTGATCTGAATCAAGGAGTGGTATATGGGGTAAGAACAGATGAGACTGCAATGCATGAAGAGTTGTGTAACAGGTTTGACTATGATGCAATATTTGGAACTGCATTGAATCGGTTCTGTGTTCAGGCTGCTGTTGGTCATCCTCTCACTGTATATGGTAAAGGAGGCCAGACTAGGGCCTTCCTTGACATAAGAGATACAGTTCAATGTGTTGAGCTTGCCATTGCAAACCCGGCTAACCCTGGAGAGTTCCGAGTCTTCAATCAATTTACTGAGCAATTTAAAGTGACTGAACTAGCTGAGCTTGTTACGAAAGCTGGTGAGAAGTTGGGCCTTGATGTGAAAACCATATCAGTGCCTAACCCTAGAGTGGAGTTAGAGGAGCATTATTACAACTGCAAAAACACTAAACTAGTTGATCTTGGACTCAAGCCACACTTTCTTTCAGATTCTCTCATTGATTCACTGCTTAACTTTGCGGTTCAGTACAAAGACCGGGTTGACACTAAGCAAATTATGCCTGGTGTTTCTTGGAGAAAGGTTGGGGTCAAAACAAAAACTCTTTCATCCTAA
Protein sequence

>Msa1160130

MAQLLSSSCSLTFSASNKPCLKPFHQCSTSFSNTVVFDNSKTPFRRLFLREQKPRKSLAVVNASTVSTGKEAPVQTSSGDPFKPKRVMVIGGDGYCGWATALHLSNKGYEVAIVDNLVRRLFDHQLGLDSLTPISSIQDRIQCWKSLTGKSIELYIGDICEFEFLSETFKSYEPDAVVHFGEQRSAPYSMIDRSRAVYTQQNNVVGTLNVLFAIKEYREDCHLVKLGTMGEYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETAMHEELCNRFDYDAIFGTALNRFCVQAAVGHPLTVYGKGGQTRAFLDIRDTVQCVELAIANPANPGEFRVFNQFTEQFKVTELAELVTKAGEKLGLDVKTISVPNPRVELEEHYYNCKNTKLVDLGLKPHFLSDSLIDSLLNFAVQYKDRVDTKQIMPGVSWRKVGVKTKTLSS*