AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1160140

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1160140 MtrunA17_Chr7g0256721 89.780 1321 95 8 2 1301 1 1302 0.0 2326
Msa1160140 MtrunA17_Chr7g0246321 75.688 218 44 4 199 407 1 218 2.27e-95 305
Msa1160140 MtrunA17_Chr7g0246321 69.444 180 48 3 588 761 40 218 1.09e-64 219
Msa1160140 MtrunA17_Chr3g0084941 60.674 89 35 0 1209 1297 565 653 1.17e-25 114
Msa1160140 MtrunA17_Chr3g0084941 39.691 194 85 7 54 229 83 262 5.07e-25 112
Msa1160140 MtrunA17_Chr3g0084941 48.276 87 45 0 443 529 567 653 2.84e-15 80.9
Msa1160140 MtrunA17_Chr3g0084941 47.126 87 46 0 797 883 567 653 5.30e-15 80.1
Msa1160140 MtrunA17_Chr4g0035521 55.670 97 42 1 1205 1300 613 709 7.68e-24 108
Msa1160140 MtrunA17_Chr4g0035521 50.633 79 39 0 449 527 626 704 7.50e-17 86.3
Msa1160140 MtrunA17_Chr4g0035521 36.232 138 80 2 757 894 588 717 1.38e-16 85.5
Msa1160140 MtrunA17_Chr4g0035521 33.184 223 89 7 34 211 29 236 5.36e-14 77.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1160140 AT5G04020.2 33.469 490 238 18 436 912 844 1258 1.23e-46 184
Msa1160140 AT5G04020.2 39.344 244 93 7 1056 1298 1297 1486 4.05e-33 140
Msa1160140 AT5G04020.2 31.950 241 132 4 1055 1295 1021 1229 3.65e-30 130
Msa1160140 AT5G04020.2 33.564 289 163 9 311 590 1028 1296 1.25e-24 112
Msa1160140 AT5G04020.2 56.180 89 39 0 439 527 1395 1483 1.43e-22 105
Msa1160140 AT5G04020.2 53.191 94 42 1 1205 1296 845 938 1.34e-21 102
Msa1160140 AT5G04020.2 52.809 89 42 0 793 881 1395 1483 1.96e-21 102
Msa1160140 AT5G04020.2 48.077 104 42 4 790 892 506 598 6.41e-18 90.9
Msa1160140 AT5G04020.2 47.525 101 44 3 437 536 507 599 1.63e-17 89.4
Msa1160140 AT5G04020.2 45.918 98 46 2 1200 1297 502 592 8.54e-17 87.0
Msa1160140 AT5G04020.1 33.469 490 238 18 436 912 844 1258 1.23e-46 184
Msa1160140 AT5G04020.1 39.344 244 93 7 1056 1298 1297 1486 4.05e-33 140
Msa1160140 AT5G04020.1 31.950 241 132 4 1055 1295 1021 1229 3.65e-30 130
Msa1160140 AT5G04020.1 33.564 289 163 9 311 590 1028 1296 1.25e-24 112
Msa1160140 AT5G04020.1 56.180 89 39 0 439 527 1395 1483 1.43e-22 105
Msa1160140 AT5G04020.1 53.191 94 42 1 1205 1296 845 938 1.34e-21 102
Msa1160140 AT5G04020.1 52.809 89 42 0 793 881 1395 1483 1.96e-21 102
Msa1160140 AT5G04020.1 48.077 104 42 4 790 892 506 598 6.41e-18 90.9
Msa1160140 AT5G04020.1 47.525 101 44 3 437 536 507 599 1.63e-17 89.4
Msa1160140 AT5G04020.1 45.918 98 46 2 1200 1297 502 592 8.54e-17 87.0
Msa1160140 AT2G38800.1 57.647 85 36 0 1213 1297 509 593 9.22e-25 111
Msa1160140 AT2G38800.1 39.267 191 91 8 34 211 39 217 8.45e-23 105
Msa1160140 AT2G38800.1 48.913 92 43 1 438 529 506 593 2.59e-19 94.4
Msa1160140 AT2G38800.1 38.158 152 78 4 733 883 457 593 2.07e-18 91.3
Msa1160140 AT3G54570.1 57.895 76 32 0 1222 1297 341 416 3.15e-20 95.5
Msa1160140 AT3G54570.1 33.929 168 98 4 48 213 30 186 6.15e-15 79.3
Msa1160140 AT3G54570.1 44.737 76 42 0 808 883 341 416 1.25e-12 72.0
Msa1160140 AT3G54570.1 31.053 190 109 4 362 529 227 416 1.34e-12 72.0

Find 240 sgRNAs with CRISPR-Local

Find 314 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCAATTTCTAGACAGTTTC+TGG 0.106013 7_4:+49896360 None:intergenic
CTTCCTAGCTGGGGTTAATT+TGG 0.141610 7_4:+49896136 None:intergenic
ACCAGTGGCCTTCATGTAAT+TGG 0.171119 7_4:+49900148 None:intergenic
GTCAATTCTCTTGGTCTTCT+TGG 0.181117 7_4:+49897511 None:intergenic
TATAGCTGCTTTGTTGATTT+AGG 0.201282 7_4:+49899698 None:intergenic
AAGATCACTGAGATCTAATT+TGG 0.203250 7_4:-49896945 Msa1160140:CDS
AATAGGTTTGCAGGGACTTC+TGG 0.234810 7_4:+49896917 None:intergenic
ATCTTCTAGTCATGACTCTT+TGG 0.235373 7_4:+49899609 None:intergenic
CAAGATGATGTCGCGTTTAA+TGG 0.246289 7_4:-49897880 Msa1160140:CDS
TCAAGAATACATAGGAAAAT+TGG 0.253677 7_4:-49900288 Msa1160140:CDS
CTGTTGTTGGTTTATCTAAT+AGG 0.254306 7_4:+49896900 None:intergenic
CCAATTCAAGATGTTGAAAA+TGG 0.256346 7_4:-49897313 Msa1160140:CDS
CGGCACCATATGTTTGTCTT+TGG 0.258518 7_4:+49899151 None:intergenic
GGATTCTACTACAGCACTTC+TGG 0.267202 7_4:+49896829 None:intergenic
GGTCAATGTGATCAGGAAAA+TGG 0.275419 7_4:+49899507 None:intergenic
AGAAAGGAATGACAAGAATA+TGG 0.282531 7_4:-49898235 Msa1160140:CDS
CCACTTCAAGATGCTGAAAA+TGG 0.285607 7_4:-49898375 Msa1160140:CDS
ATCTTTACTGTGGACAGTTT+TGG 0.287048 7_4:+49899274 None:intergenic
ACCAGAAACTGTCTAGAAAT+TGG 0.290294 7_4:-49896361 Msa1160140:CDS
ATAGTTTCTACTGGCTTAAT+AGG 0.292358 7_4:+49897121 None:intergenic
TTAATAGGCTTTAAAAGTTC+AGG 0.302674 7_4:+49897136 None:intergenic
GTCACAAAAGTCCACGAAAA+AGG 0.311024 7_4:-49899345 Msa1160140:CDS
GACTCTTTGGGACTTGTTAC+CGG 0.321742 7_4:+49899622 None:intergenic
GTGATCTTACAAGACCATTC+AGG 0.324754 7_4:+49896960 None:intergenic
TCCACCTTCGGCACTTCTTT+AGG 0.325409 7_4:+49898684 None:intergenic
TACAGGAAAATGTGAAAATA+AGG 0.329040 7_4:-49898988 Msa1160140:CDS
GAGGAAAGGTCTTCAACTTC+AGG 0.331667 7_4:+49898810 None:intergenic
AACAGCCGAAGGCGAAAATA+TGG 0.331949 7_4:-49898112 Msa1160140:CDS
AACAGAAGTAGTCAAGTTTC+CGG 0.332191 7_4:-49898166 Msa1160140:CDS
GGTTTATCTAATAGGTTTGC+AGG 0.335936 7_4:+49896908 None:intergenic
GAAGAGAGGTCTTCAGCTTC+AGG 0.339503 7_4:+49897748 None:intergenic
TGCGTCTTCTACCATCTTGA+TGG 0.339841 7_4:+49896556 None:intergenic
TTGTTTCTCTAGCTGATTCT+CGG 0.340174 7_4:+49896808 None:intergenic
GGCTTTAAAAGTTCAGGTAT+TGG 0.342901 7_4:+49897142 None:intergenic
GGAGCATCGTGAGGCTTAAA+AGG 0.344206 7_4:+49899206 None:intergenic
GGTTTGCGACACTAGGATAT+TGG 0.346949 7_4:-49898145 Msa1160140:CDS
TCAGGAAGTGGCTGTGTGTC+TGG 0.347530 7_4:+49896518 None:intergenic
TCCGTCTTCTGTGCTTCTTT+AGG 0.348495 7_4:+49897622 None:intergenic
GATAATAAGCTTCCCTTTGT+TGG 0.352376 7_4:-49897925 Msa1160140:CDS
ATGGCAGTGATGGGAATAAT+AGG 0.354407 7_4:-49899661 Msa1160140:CDS
GTGTGGTTTCCTTCCTCTGC+TGG 0.355186 7_4:+49900214 None:intergenic
TCTTCTGAATCGGGTTCTAA+TGG 0.357240 7_4:+49896248 None:intergenic
TATGCTTACTGCTCTCTTCA+TGG 0.358373 7_4:-49899431 Msa1160140:CDS
TCTTCTAGTCATGACTCTTT+GGG 0.359745 7_4:+49899610 None:intergenic
TAGTGTGGCATTTGGAGTTC+AGG 0.361706 7_4:-49899072 Msa1160140:CDS
AAAGAACAAAAGATGGAATC+TGG 0.362063 7_4:-49896443 Msa1160140:CDS
TTCTGCAACGGTGGAGTCTC+AGG 0.372685 7_4:-49898343 Msa1160140:CDS
TTCAGCTGCACTTTATAATC+TGG 0.374274 7_4:+49898087 None:intergenic
TCAAGGAGTATCAGCTGTTA+AGG 0.374415 7_4:-49899462 Msa1160140:CDS
TAAAGTGATAACAACTGATA+TGG 0.376333 7_4:-49900183 Msa1160140:CDS
AAATCTGATACAAGATCTTC+TGG 0.391698 7_4:+49897049 None:intergenic
GTCACTCTTTGTCTTTGAGC+AGG 0.403744 7_4:+49898429 None:intergenic
TTCTGCAACAGTGGAATCTC+AGG 0.406186 7_4:-49897281 Msa1160140:CDS
GTCACTCTTTGTCTTTGAGC+TGG 0.410099 7_4:+49897367 None:intergenic
TTGAGGTAACTGAGAGAGAA+AGG 0.412316 7_4:-49898251 Msa1160140:CDS
TTCTGCTGCAATTCATTATC+CGG 0.412990 7_4:+49899131 None:intergenic
GGTAGATATCTAGGCTCTCT+TGG 0.413052 7_4:+49896269 None:intergenic
CAAGTGGCTTTATGCAAACT+TGG 0.417355 7_4:+49899551 None:intergenic
TTCTTCCTTGCTATGATTCG+AGG 0.417434 7_4:+49898293 None:intergenic
TTTCTAGACAGTTTCTGGTT+CGG 0.425984 7_4:+49896365 None:intergenic
GATTATCATTATTTATCATC+AGG 0.426103 7_4:-49900483 Msa1160140:intron
CTGTCAATTGTGCTGTTGTC+AGG 0.427341 7_4:+49896500 None:intergenic
TGCCACATCAGTTGATGTCT+TGG 0.431113 7_4:+49896721 None:intergenic
CAGTGAAACAGACTCGGATA+TGG 0.431278 7_4:-49897830 Msa1160140:CDS
ACATCTTTAATGTCTGTTGT+TGG 0.433278 7_4:+49896887 None:intergenic
AACTTTCTCTGCTTCGAAGT+TGG 0.435193 7_4:+49898542 None:intergenic
TAGGAGATTCATCAAGGCAT+TGG 0.436395 7_4:-49896312 Msa1160140:CDS
TAAGCTTCCCTTTGTTGGTA+AGG 0.436775 7_4:-49897920 Msa1160140:CDS
TAAGGTTCCTCTTGTCGAAA+AGG 0.436998 7_4:-49898970 Msa1160140:CDS
AACAGCACAATTGACAGAAC+TGG 0.437768 7_4:-49896494 Msa1160140:CDS
TTATCTGCCAAGACATTGCT+TGG 0.438033 7_4:-49897223 Msa1160140:CDS
CAAAAGATGGAATCTGGAAA+TGG 0.438745 7_4:-49896437 Msa1160140:CDS
TCAATTGAGGCATCAAGATA+TGG 0.438891 7_4:-49896216 Msa1160140:CDS
TCCTCTCTTCTGATGTTTGG+CGG 0.439556 7_4:+49898511 None:intergenic
GCTTGATTATGCACTTCAAA+AGG 0.440589 7_4:-49898469 Msa1160140:CDS
GCATCTGAAGTCAATTCTCT+TGG 0.443920 7_4:+49897502 None:intergenic
GGTTCTAATGGTAGATATCT+AGG 0.445208 7_4:+49896260 None:intergenic
GAGAACTACTTCCCTCTTGA+GGG 0.446950 7_4:+49899483 None:intergenic
TTCTCTCTTCCGATGTTTGG+CGG 0.448219 7_4:+49897449 None:intergenic
CACTTGCTCTTCCACTATCA+AGG 0.450193 7_4:-49899534 Msa1160140:CDS
TCTCTTTCCTGCACTCCATA+TGG 0.455808 7_4:+49898015 None:intergenic
CATGCAGTATTAAGTAATAC+AGG 0.456042 7_4:-49899005 Msa1160140:CDS
GTAGTACTCGTACCATGTTT+AGG 0.456804 7_4:+49898045 None:intergenic
GCATCTGAAGGCAATTGTCT+TGG 0.460907 7_4:+49898564 None:intergenic
AAAAGCTAATCATGTTGAAA+AGG 0.461501 7_4:-49897570 Msa1160140:CDS
TAGTGAAACAGAATCAGATA+TGG 0.464737 7_4:-49898892 Msa1160140:CDS
CAACTGTTTATAGTTTCTAC+TGG 0.464819 7_4:+49897112 None:intergenic
CGCCACAGCACGATCTTTGA+AGG 0.468626 7_4:+49896610 None:intergenic
GCTTGACTATGCACTTCAAA+AGG 0.468681 7_4:-49897407 Msa1160140:CDS
AGTACTACTAGTGTGGCATT+TGG 0.472076 7_4:-49899080 Msa1160140:CDS
GTCAATGTGATCAGGAAAAT+GGG 0.478638 7_4:+49899508 None:intergenic
GCTTGATTATGCACTTAGAC+AGG 0.478746 7_4:-49896165 Msa1160140:CDS
CCAGTGGCCTTCATGTAATT+GGG 0.479643 7_4:+49900149 None:intergenic
CTAGTAGTACTACCAGGTTT+AGG 0.481270 7_4:+49899092 None:intergenic
CTTTAAAATGATGAATCAAA+AGG 0.481344 7_4:-49900363 Msa1160140:exon
CTTCAGATGCCAACTTCGAA+GGG 0.481812 7_4:-49897489 Msa1160140:CDS
GTAGATATCTAGGCTCTCTT+GGG 0.482666 7_4:+49896270 None:intergenic
GTTGAAGACCTTTCCTCTGA+TGG 0.482829 7_4:-49898804 Msa1160140:CDS
ACTAAAAGCTTAATCCTGAA+TGG 0.485637 7_4:-49896974 Msa1160140:CDS
GATTCTACTACAGCACTTCT+GGG 0.486311 7_4:+49896830 None:intergenic
ACAAGAGAAACTTCTGTCTC+TGG 0.487251 7_4:-49896665 Msa1160140:CDS
TGAGGGAGGTCAATGTGATC+AGG 0.489122 7_4:+49899500 None:intergenic
ACCACAGACTTCTGCAACGG+TGG 0.490631 7_4:-49898352 Msa1160140:CDS
CATGTTGAAAAGGTTTGTAA+AGG 0.491924 7_4:-49897560 Msa1160140:CDS
GTTTGTAAAGGCATTAGATA+AGG 0.492442 7_4:-49897548 Msa1160140:CDS
AAAATGGGAATCCTTGATAG+TGG 0.492843 7_4:+49899523 None:intergenic
CCTCTTGAAAAGGTTTGTAA+AGG 0.495617 7_4:-49898622 Msa1160140:CDS
TTTCTTGATGAGATCCTCAC+AGG 0.500070 7_4:+49899575 None:intergenic
AGAAGGTAATCCTCTTGAAA+AGG 0.500374 7_4:-49898632 Msa1160140:CDS
AAAGAAAAGGCACAGAAGAA+TGG 0.501317 7_4:-49896190 Msa1160140:CDS
CTAGAGAAACAAGGCAGCAC+AGG 0.502444 7_4:-49896797 Msa1160140:CDS
GTGGAGGTAAAATTGAAGAA+AGG 0.504281 7_4:-49898731 Msa1160140:CDS
CATAGCAAGGAAGAAATAAA+CGG 0.505001 7_4:-49898285 Msa1160140:CDS
TTCTTTGTCCTTACCAACAA+AGG 0.506662 7_4:+49897912 None:intergenic
GAGAAAAGTGGAGCTGTTGG+TGG 0.508165 7_4:-49896114 Msa1160140:CDS
ATGACCACCAATGACATCCT+TGG 0.508562 7_4:+49897015 None:intergenic
CAAGATATGGCAGAAAGAAA+AGG 0.510869 7_4:-49896203 Msa1160140:CDS
ACTTCAGATGCCAACTTCGA+AGG 0.511765 7_4:-49897490 Msa1160140:CDS
TGAGAACTACTTCCCTCTTG+AGG 0.517001 7_4:+49899482 None:intergenic
AATATCCTAGTGTCGCAAAC+CGG 0.519985 7_4:+49898147 None:intergenic
AGAGGATTACCTTCTTCAGA+TGG 0.520545 7_4:+49898640 None:intergenic
TCTTTGTCCTTACCAACAAA+GGG 0.524211 7_4:+49897913 None:intergenic
TTCAACCAAAGACAAACATA+TGG 0.527346 7_4:-49899156 Msa1160140:CDS
ATTGTGCTGTTGTCAGGAAG+TGG 0.532899 7_4:+49896506 None:intergenic
GAATCCACTGATGGCAGTGA+TGG 0.533653 7_4:-49899671 Msa1160140:CDS
AGGAGTTTCTGTGAAACTTG+TGG 0.533876 7_4:+49897642 None:intergenic
AAAACTGTCCACAGTAAAGA+TGG 0.535440 7_4:-49899272 Msa1160140:CDS
CGACACTAGGATATTGGAGG+AGG 0.537280 7_4:-49898139 Msa1160140:CDS
CGTTCAAAATCTAGAAGCTA+CGG 0.537295 7_4:-49897718 Msa1160140:CDS
AGTACTACTGATGTGCCATA+TGG 0.538348 7_4:-49898030 Msa1160140:CDS
CAGCACAGGACTGTGGTTCA+CGG 0.538685 7_4:-49896783 Msa1160140:CDS
AGGAGATTCTGTGAAAGTTG+TGG 0.538777 7_4:+49898704 None:intergenic
GGTGGAGAGGAAGATAATGA+AGG 0.539857 7_4:-49898939 Msa1160140:CDS
CAAGAGGGAAGTAGTTCTCA+AGG 0.542390 7_4:-49899479 Msa1160140:CDS
CCCAGCTAGGAAGAGAAAAG+TGG 0.542941 7_4:-49896126 Msa1160140:CDS
TTTGTTGGTAAGGACAAAGA+AGG 0.544205 7_4:-49897910 Msa1160140:CDS
AAAAGAAGAATCAGTATCAA+AGG 0.544289 7_4:-49896399 Msa1160140:CDS
GCTTCGAAGTTGGCATCTGA+AGG 0.550873 7_4:+49898552 None:intergenic
CACTGGTAGTTCTCATGCAA+AGG 0.551656 7_4:-49900132 Msa1160140:CDS
GCAGCTGAAGAGTATTGTGC+AGG 0.551712 7_4:-49898073 Msa1160140:CDS
GAAGCATCAAGTGATTGAAT+CGG 0.553368 7_4:+49898315 None:intergenic
AAGGATGTCATTGGTGGTCA+TGG 0.553583 7_4:-49897013 Msa1160140:CDS
AAAGAAGAATATAATCGAGC+TGG 0.554083 7_4:-49898862 Msa1160140:CDS
AAATGATGAAAGTGCTAATG+TGG 0.554554 7_4:-49898199 Msa1160140:CDS
CTTCAAAGATCGTGCTGTGG+CGG 0.555017 7_4:-49896609 Msa1160140:CDS
AGGAAAGGTCTTCAACTTCA+GGG 0.556196 7_4:+49898811 None:intergenic
CCCAATTACATGAAGGCCAC+TGG 0.558174 7_4:-49900149 Msa1160140:CDS
GAAGAGAAAAGTGGAGCTGT+TGG 0.558888 7_4:-49896117 Msa1160140:CDS
TGAGGAAGTGATTGAAGCAG+AGG 0.558995 7_4:-49900327 Msa1160140:CDS
CAAAACAAGTTGGTAATGCA+AGG 0.559887 7_4:-49899313 Msa1160140:CDS
ACTTCTTAGGAGATTCATCA+AGG 0.560611 7_4:-49896318 Msa1160140:CDS
TCTTTGCAAAGGAAATTACA+TGG 0.562066 7_4:+49900568 None:intergenic
AGGAAGAAATAAACGGTGGA+AGG 0.562381 7_4:-49898278 Msa1160140:CDS
AAAGGCTGAGATTGAATCTG+AGG 0.562927 7_4:-49900345 Msa1160140:CDS
AGTTTCCGGTTTGCGACACT+AGG 0.563011 7_4:-49898152 Msa1160140:CDS
ATCGCGATCTTCTGCAACAG+TGG 0.563189 7_4:-49897290 Msa1160140:CDS
AAGCTGGAGCCATCTGAAGA+AGG 0.567497 7_4:-49898649 Msa1160140:CDS
ACTGGAGAAATTTACAGTGA+AGG 0.567602 7_4:-49896476 Msa1160140:CDS
GATAACAACTGATATGGTAG+AGG 0.567732 7_4:-49900177 Msa1160140:CDS
TCTCTTCATGGTCATCGCCA+TGG 0.570219 7_4:-49899419 Msa1160140:CDS
TTTCCAAATTAACCCCAGCT+AGG 0.570291 7_4:-49896139 Msa1160140:CDS
AGGAACAGTACAAGTGATGC+CGG 0.573676 7_4:-49899641 Msa1160140:CDS
ATTGACACAAAGAGCTTCAA+CGG 0.576395 7_4:+49899386 None:intergenic
GATGGCAGATCAAAACAAGT+TGG 0.576489 7_4:-49899323 Msa1160140:CDS
TGATGTGCCATATGGAGTGC+AGG 0.577439 7_4:-49898022 Msa1160140:CDS
GTTTATCTAATAGGTTTGCA+GGG 0.578603 7_4:+49896909 None:intergenic
GTTTGTAAAGGCATTAGAGA+AGG 0.579655 7_4:-49898610 Msa1160140:CDS
TTGCGACACTAGGATATTGG+AGG 0.581788 7_4:-49898142 Msa1160140:CDS
TCTAGCCATCAAGAATACAT+AGG 0.583141 7_4:-49900296 Msa1160140:CDS
CAAAGACAAACATATGGTGC+CGG 0.583545 7_4:-49899150 Msa1160140:CDS
GGTAGTTCTCATGCAAAGGA+TGG 0.584182 7_4:-49900128 Msa1160140:CDS
TCCTAAAGAAGTGCCGAAGG+TGG 0.585607 7_4:-49898685 Msa1160140:CDS
TCCTAAAGAAGCACAGAAGA+CGG 0.585847 7_4:-49897623 Msa1160140:CDS
ATTCCCATCACTGCCATCAG+TGG 0.585925 7_4:+49899667 None:intergenic
TTTACACAAGAGCCTAAACC+TGG 0.587166 7_4:-49899104 Msa1160140:CDS
ATCACTTTATGATCATAGTG+TGG 0.588507 7_4:+49900197 None:intergenic
GAGGTACTCTTAGAAAAGAG+TGG 0.590631 7_4:-49898750 Msa1160140:CDS
CTTGATAGTGGAAGAGCAAG+TGG 0.591085 7_4:+49899535 None:intergenic
CTATATTCTGAATCCACTGA+TGG 0.591792 7_4:-49899680 Msa1160140:CDS
AAATACCATTGCTCAAGTCA+AGG 0.596469 7_4:-49900505 Msa1160140:five_prime_UTR
TCTTGATGGCTTCAATCTGT+CGG 0.596612 7_4:+49896570 None:intergenic
AAAGATTGTCCAGCAGAGGA+AGG 0.599326 7_4:-49900223 Msa1160140:CDS
CTTCAAAGATTGTCCAGCAG+AGG 0.599644 7_4:-49900227 Msa1160140:CDS
AACAACAGACATTAAAGATG+TGG 0.600755 7_4:-49896885 Msa1160140:CDS
GAAGTGGCTGTGTGTCTGGA+AGG 0.602919 7_4:+49896522 None:intergenic
GATGGTCATTCAAGATCTAG+AGG 0.603093 7_4:-49898786 Msa1160140:CDS
TTGAATGACCATCAGAGGAA+AGG 0.603934 7_4:+49898796 None:intergenic
AGATCTTGAATGACCATCAG+AGG 0.604665 7_4:+49898791 None:intergenic
CAATTACAGTGAAACAGACT+CGG 0.605562 7_4:-49897836 Msa1160140:CDS
GGCATATCTTGAATAACCAC+AGG 0.606171 7_4:+49896632 None:intergenic
TCACATTGACCTCCCTCAAG+AGG 0.606739 7_4:-49899495 Msa1160140:CDS
GGCATCACCCAATTACATGA+AGG 0.607148 7_4:-49900156 Msa1160140:CDS
CACATTGACCTCCCTCAAGA+GGG 0.608923 7_4:-49899494 Msa1160140:CDS
AATCCACTGATGGCAGTGAT+GGG 0.612724 7_4:-49899670 Msa1160140:CDS
AAAACCAAGGATGTCATTGG+TGG 0.613734 7_4:-49897019 Msa1160140:CDS
ATAATCCTTGACTTGAGCAA+TGG 0.614343 7_4:+49900500 None:intergenic
TTGAACGATCATCAGAAGAG+AGG 0.614933 7_4:+49897734 None:intergenic
ACAGATTGAAGCCATCAAGA+TGG 0.615714 7_4:-49896567 Msa1160140:CDS
GTTCACGGTGTTTAAGCACA+TGG 0.618898 7_4:-49896768 Msa1160140:CDS
TCGCATTCATTAACTGTGGA+TGG 0.619243 7_4:+49899182 None:intergenic
TGAAGCTCTTTGTGTCAATG+AGG 0.619424 7_4:-49899382 Msa1160140:CDS
ATCTCCTAAAGAAGTGCCGA+AGG 0.621678 7_4:-49898688 Msa1160140:CDS
CATTCATTAACTGTGGATGG+TGG 0.622712 7_4:+49899185 None:intergenic
ATCTGGAAATGGAATAGCCG+AGG 0.625733 7_4:-49896426 Msa1160140:CDS
GTACTCTTAGAAAAGAGTGA+AGG 0.628289 7_4:-49897685 Msa1160140:CDS
GGAAGAAATAAACGGTGGAA+GGG 0.636613 7_4:-49898277 Msa1160140:CDS
CATGCAGTATTAAGTAACAC+AGG 0.637489 7_4:-49897955 Msa1160140:CDS
GACACAAAGAGCTTCAACGG+AGG 0.639674 7_4:+49899389 None:intergenic
CTGAAGAGTATTGTGCAGGA+AGG 0.640533 7_4:-49898069 Msa1160140:CDS
AACTACTTCCCTCTTGAGGG+AGG 0.642254 7_4:+49899486 None:intergenic
TTCCAAGACATCAACTGATG+TGG 0.642657 7_4:-49896723 Msa1160140:CDS
GATGATGTCGCGTTTAATGG+AGG 0.643268 7_4:-49897877 Msa1160140:CDS
TGCTTCCTCGAATCATAGCA+AGG 0.645095 7_4:-49898298 Msa1160140:CDS
GCCACAGCACGATCTTTGAA+GGG 0.645871 7_4:+49896611 None:intergenic
ACCTGGTAGTACTACTAGTG+TGG 0.650740 7_4:-49899087 Msa1160140:CDS
GAGAGTTACCATCTTTACTG+TGG 0.650922 7_4:+49899264 None:intergenic
CTCTGGTGAAAGTACACCTG+TGG 0.652581 7_4:-49896648 Msa1160140:CDS
TGGACCACAGACTTCTGCAA+CGG 0.654154 7_4:-49898355 Msa1160140:CDS
GAGGAGGAAGTAACAGCCGA+AGG 0.654162 7_4:-49898123 Msa1160140:CDS
ACCGCCAAACATCAGAAGAG+AGG 0.655407 7_4:-49898512 Msa1160140:CDS
GCCACACTAGTAGTACTACC+AGG 0.658539 7_4:+49899086 None:intergenic
AACTATAAACAGTTGTCACG+AGG 0.660354 7_4:-49897104 Msa1160140:CDS
AGCAAGGAAGAAATAAACGG+TGG 0.663343 7_4:-49898282 Msa1160140:CDS
GAGAATCAGCTAGAGAAACA+AGG 0.663713 7_4:-49896806 Msa1160140:CDS
TTACATGGAAGTGTTCAGCA+TGG 0.666113 7_4:+49900583 None:intergenic
TCCACCGTTGCAGAAGTCTG+TGG 0.667308 7_4:+49898351 None:intergenic
AGAAGAATCAGTATCAAAGG+AGG 0.668259 7_4:-49896396 Msa1160140:CDS
GATTAAGCTTGAAGCCTGTG+AGG 0.668710 7_4:-49899589 Msa1160140:CDS
GCCCTTCAAAGATCGTGCTG+TGG 0.671017 7_4:-49896612 Msa1160140:CDS
GTGCAGGAAGGTCCTAAACA+TGG 0.672840 7_4:-49898057 Msa1160140:CDS
TAGAGGCAATGAAACAGATG+AGG 0.674024 7_4:-49898769 Msa1160140:CDS
TATAAACAGTTGTCACGAGG+AGG 0.679486 7_4:-49897101 Msa1160140:CDS
TTCAGATGCCAACTTCGAAG+GGG 0.679519 7_4:-49897488 Msa1160140:CDS
AACAAGGCAGCACAGGACTG+TGG 0.680675 7_4:-49896790 Msa1160140:CDS
GTGGATGGTGGAGCATCGTG+AGG 0.688903 7_4:+49899197 None:intergenic
TCAACGGAGGCAGATCACCA+TGG 0.701973 7_4:+49899402 None:intergenic
GTACTCTTAGAAAAGAGTGG+AGG 0.707522 7_4:-49898747 Msa1160140:CDS
TGTCTTGGCAGATAAAAGTG+AGG 0.709407 7_4:+49897231 None:intergenic
CTTTGCATGAGAACTACCAG+TGG 0.712891 7_4:+49900133 None:intergenic
AGTGTCGCATTCATTAACTG+TGG 0.722962 7_4:+49899178 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAACTAATTTATTACACTA+AGG + chr7_4:49896244-49896263 None:intergenic 15.0%
!! TCATAGAATAAAAATAACTA+TGG + chr7_4:49896273-49896292 None:intergenic 15.0%
!! ATCAGAAATATATTAAAAAG+TGG - chr7_4:49897625-49897644 Msa1160140:CDS 15.0%
!! GATTATCATTATTTATCATC+AGG - chr7_4:49896185-49896204 Msa1160140:CDS 20.0%
!!! CTTTAAAATGATGAATCAAA+AGG - chr7_4:49896305-49896324 Msa1160140:CDS 20.0%
!! AATCGCATATATAAAATTCA+AGG + chr7_4:49896596-49896615 None:intergenic 20.0%
!! ATCAGAGATATATAAAAAAG+TGG - chr7_4:49898675-49898694 Msa1160140:CDS 20.0%
!!! TTGTTTTTTTGTCTTTGCAA+AGG + chr7_4:49896114-49896133 None:intergenic 25.0%
!! ATTTTCCTATGTATTCTTGA+TGG + chr7_4:49896380-49896399 None:intergenic 25.0%
! TCAAGAATACATAGGAAAAT+TGG - chr7_4:49896380-49896399 Msa1160140:CDS 25.0%
! TAAAGTGATAACAACTGATA+TGG - chr7_4:49896485-49896504 Msa1160140:CDS 25.0%
! TGTACTAAATTGCATATCAT+GGG - chr7_4:49896689-49896708 Msa1160140:CDS 25.0%
! TCAAATGTGATAGTTATTGT+GGG - chr7_4:49896849-49896868 Msa1160140:CDS 25.0%
! TACAGGAAAATGTGAAAATA+AGG - chr7_4:49897680-49897699 Msa1160140:CDS 25.0%
! AAAAGCTAATCATGTTGAAA+AGG - chr7_4:49899098-49899117 Msa1160140:CDS 25.0%
!! ATTTTCAAATGACAGTACTA+TGG - chr7_4:49899477-49899496 Msa1160140:CDS 25.0%
!!! TTAATAGGCTTTAAAAGTTC+AGG + chr7_4:49899535-49899554 None:intergenic 25.0%
! AGATTTGAATACAAAAACCA+AGG - chr7_4:49899636-49899655 Msa1160140:CDS 25.0%
!! ATTCCATCTTTTGTTCTTTT+TGG + chr7_4:49900224-49900243 None:intergenic 25.0%
! AAAAGAAGAATCAGTATCAA+AGG - chr7_4:49900269-49900288 Msa1160140:CDS 25.0%
! TTAAAAAAGTGGTACTTCTT+AGG - chr7_4:49900337-49900356 Msa1160140:CDS 25.0%
!!! AACTTTTTCATCTTCTGAAT+CGG + chr7_4:49900433-49900452 None:intergenic 25.0%
! AAGATGAAAAAGTTCAATTG+AGG - chr7_4:49900439-49900458 Msa1160140:intron 25.0%
TCTTTGCAAAGGAAATTACA+TGG + chr7_4:49896103-49896122 None:intergenic 30.0%
!! TTGTTTTTCTTCACTTGATG+TGG + chr7_4:49896145-49896164 None:intergenic 30.0%
ATCACTTTATGATCATAGTG+TGG + chr7_4:49896474-49896493 None:intergenic 30.0%
GTGTACTAAATTGCATATCA+TGG - chr7_4:49896688-49896707 Msa1160140:CDS 30.0%
TGGATTTGAGTAGTTTAAGT+TGG - chr7_4:49896767-49896786 Msa1160140:CDS 30.0%
!! TTTGAGTAGTTTAAGTTGGT+AGG - chr7_4:49896771-49896790 Msa1160140:CDS 30.0%
TCACATTTGACTATTTCACA+CGG + chr7_4:49896839-49896858 None:intergenic 30.0%
GTCAAATGTGATAGTTATTG+TGG - chr7_4:49896848-49896867 Msa1160140:CDS 30.0%
AGTAATAATGTTGTTGCCTA+TGG - chr7_4:49896884-49896903 Msa1160140:CDS 30.0%
!! AATCAAGCTTTTAACTGTCA+AGG - chr7_4:49896945-49896964 Msa1160140:CDS 30.0%
!! ATCAAGCTTTTAACTGTCAA+GGG - chr7_4:49896946-49896965 Msa1160140:CDS 30.0%
!! TATAGCTGCTTTGTTGATTT+AGG + chr7_4:49896973-49896992 None:intergenic 30.0%
TTCAACCAAAGACAAACATA+TGG - chr7_4:49897512-49897531 Msa1160140:CDS 30.0%
CATGCAGTATTAAGTAATAC+AGG - chr7_4:49897663-49897682 Msa1160140:CDS 30.0%
TAGTGAAACAGAATCAGATA+TGG - chr7_4:49897776-49897795 Msa1160140:CDS 30.0%
AAAGAAGAATATAATCGAGC+TGG - chr7_4:49897806-49897825 Msa1160140:CDS 30.0%
CATAGCAAGGAAGAAATAAA+CGG - chr7_4:49898383-49898402 Msa1160140:CDS 30.0%
AGAAAGGAATGACAAGAATA+TGG - chr7_4:49898433-49898452 Msa1160140:CDS 30.0%
!! AAATGATGAAAGTGCTAATG+TGG - chr7_4:49898469-49898488 Msa1160140:CDS 30.0%
!!! ACATGATTAGCTTTTTCAGA+TGG + chr7_4:49899093-49899112 None:intergenic 30.0%
CATGTTGAAAAGGTTTGTAA+AGG - chr7_4:49899108-49899127 Msa1160140:CDS 30.0%
!! GTTTGTAAAGGCATTAGATA+AGG - chr7_4:49899120-49899139 Msa1160140:CDS 30.0%
ATCGGAAGAGAGAAAAAAAT+CGG - chr7_4:49899228-49899247 Msa1160140:CDS 30.0%
!!! TAGAAGCTTTTGAAACACTT+CGG - chr7_4:49899332-49899351 Msa1160140:CDS 30.0%
! CCATTTTCAACATCTTGAAT+TGG + chr7_4:49899358-49899377 None:intergenic 30.0%
CCAATTCAAGATGTTGAAAA+TGG - chr7_4:49899355-49899374 Msa1160140:CDS 30.0%
!! ATAGTTTCTACTGGCTTAAT+AGG + chr7_4:49899550-49899569 None:intergenic 30.0%
CAACTGTTTATAGTTTCTAC+TGG + chr7_4:49899559-49899578 None:intergenic 30.0%
!!! AACTTCATCGACCAATTTTT+TGG + chr7_4:49899599-49899618 None:intergenic 30.0%
AAATCTGATACAAGATCTTC+TGG + chr7_4:49899622-49899641 None:intergenic 30.0%
ACTAAAAGCTTAATCCTGAA+TGG - chr7_4:49899694-49899713 Msa1160140:CDS 30.0%
AAGATCACTGAGATCTAATT+TGG - chr7_4:49899723-49899742 Msa1160140:intron 30.0%
GTTTATCTAATAGGTTTGCA+GGG + chr7_4:49899762-49899781 None:intergenic 30.0%
!! CTGTTGTTGGTTTATCTAAT+AGG + chr7_4:49899771-49899790 None:intergenic 30.0%
ACATCTTTAATGTCTGTTGT+TGG + chr7_4:49899784-49899803 None:intergenic 30.0%
AACAACAGACATTAAAGATG+TGG - chr7_4:49899783-49899802 Msa1160140:intron 30.0%
GAACCAAAAAGAACAAAAGA+TGG - chr7_4:49900218-49900237 Msa1160140:CDS 30.0%
AAAGAACAAAAGATGGAATC+TGG - chr7_4:49900225-49900244 Msa1160140:CDS 30.0%
TTGGAGCAATCTTAAAAAAG+TGG - chr7_4:49900326-49900345 Msa1160140:CDS 30.0%
!!! ACTTTTTCATCTTCTGAATC+GGG + chr7_4:49900432-49900451 None:intergenic 30.0%
AAATACCATTGCTCAAGTCA+AGG - chr7_4:49896163-49896182 Msa1160140:CDS 35.0%
! ATAATCCTTGACTTGAGCAA+TGG + chr7_4:49896171-49896190 None:intergenic 35.0%
TCTAGCCATCAAGAATACAT+AGG - chr7_4:49896372-49896391 Msa1160140:CDS 35.0%
GATAACAACTGATATGGTAG+AGG - chr7_4:49896491-49896510 Msa1160140:CDS 35.0%
TTTGACTATGTAGTCAATCG+CGG - chr7_4:49896615-49896634 Msa1160140:CDS 35.0%
TAGCTACTAGTTGACAACAT+TGG - chr7_4:49896747-49896766 Msa1160140:CDS 35.0%
ATGTGATAGTTATTGTGGGA+TGG - chr7_4:49896853-49896872 Msa1160140:CDS 35.0%
CTATATTCTGAATCCACTGA+TGG - chr7_4:49896988-49897007 Msa1160140:CDS 35.0%
TCTTCTAGTCATGACTCTTT+GGG + chr7_4:49897061-49897080 None:intergenic 35.0%
ATCTTCTAGTCATGACTCTT+TGG + chr7_4:49897062-49897081 None:intergenic 35.0%
AAAATGGGAATCCTTGATAG+TGG + chr7_4:49897148-49897167 None:intergenic 35.0%
GTCAATGTGATCAGGAAAAT+GGG + chr7_4:49897163-49897182 None:intergenic 35.0%
ATTGACACAAAGAGCTTCAA+CGG + chr7_4:49897285-49897304 None:intergenic 35.0%
!! CAAAACAAGTTGGTAATGCA+AGG - chr7_4:49897355-49897374 Msa1160140:CDS 35.0%
! ATCTTTACTGTGGACAGTTT+TGG + chr7_4:49897397-49897416 None:intergenic 35.0%
AAAACTGTCCACAGTAAAGA+TGG - chr7_4:49897396-49897415 Msa1160140:CDS 35.0%
TCAGCAGAATGTGAAAAATG+TGG - chr7_4:49897425-49897444 Msa1160140:CDS 35.0%
TTCTGCTGCAATTCATTATC+CGG + chr7_4:49897540-49897559 None:intergenic 35.0%
! TCTTTTTCCTTTTCGACAAG+AGG + chr7_4:49897708-49897727 None:intergenic 35.0%
CTTGTCGAAAAGGAAAAAGA+AGG - chr7_4:49897708-49897727 Msa1160140:CDS 35.0%
GTGGAGGTAAAATTGAAGAA+AGG - chr7_4:49897937-49897956 Msa1160140:CDS 35.0%
AGAAGGTAATCCTCTTGAAA+AGG - chr7_4:49898036-49898055 Msa1160140:CDS 35.0%
!! CCTTTACAAACCTTTTCAAG+AGG + chr7_4:49898049-49898068 None:intergenic 35.0%
CCTCTTGAAAAGGTTTGTAA+AGG - chr7_4:49898046-49898065 Msa1160140:CDS 35.0%
!! GTTTGTAAAGGCATTAGAGA+AGG - chr7_4:49898058-49898077 Msa1160140:CDS 35.0%
! TTTTCCTCTCTTCTGATGTT+TGG + chr7_4:49898163-49898182 None:intergenic 35.0%
AGAAGAGAGGAAAAAATCTG+AGG - chr7_4:49898169-49898188 Msa1160140:CDS 35.0%
GCTTGATTATGCACTTCAAA+AGG - chr7_4:49898199-49898218 Msa1160140:CDS 35.0%
! GAAGCATCAAGTGATTGAAT+CGG + chr7_4:49898356-49898375 None:intergenic 35.0%
AACAGAAGTAGTCAAGTTTC+CGG - chr7_4:49898502-49898521 Msa1160140:CDS 35.0%
TTCAGCTGCACTTTATAATC+TGG + chr7_4:49898584-49898603 None:intergenic 35.0%
CATGCAGTATTAAGTAACAC+AGG - chr7_4:49898713-49898732 Msa1160140:CDS 35.0%
GATAATAAGCTTCCCTTTGT+TGG - chr7_4:49898743-49898762 Msa1160140:CDS 35.0%
TCTTTGTCCTTACCAACAAA+GGG + chr7_4:49898758-49898777 None:intergenic 35.0%
TTCTTTGTCCTTACCAACAA+AGG + chr7_4:49898759-49898778 None:intergenic 35.0%
! TTTGTTGGTAAGGACAAAGA+AGG - chr7_4:49898758-49898777 Msa1160140:CDS 35.0%
CAATTACAGTGAAACAGACT+CGG - chr7_4:49898832-49898851 Msa1160140:CDS 35.0%
CGTTCAAAATCTAGAAGCTA+CGG - chr7_4:49898950-49898969 Msa1160140:CDS 35.0%
GTACTCTTAGAAAAGAGTGA+AGG - chr7_4:49898983-49899002 Msa1160140:CDS 35.0%
! TTTTCTTAACCGCCAAACAT+CGG - chr7_4:49899210-49899229 Msa1160140:CDS 35.0%
! TTTTTCTCTCTTCCGATGTT+TGG + chr7_4:49899225-49899244 None:intergenic 35.0%
! TACTTTTCCAAGCAATGTCT+TGG + chr7_4:49899455-49899474 None:intergenic 35.0%
!! GGCTTTAAAAGTTCAGGTAT+TGG + chr7_4:49899529-49899548 None:intergenic 35.0%
AACTATAAACAGTTGTCACG+AGG - chr7_4:49899564-49899583 Msa1160140:CDS 35.0%
!!! TCATCGACCAATTTTTTGGT+TGG + chr7_4:49899595-49899614 None:intergenic 35.0%
ACAAAAACCAAGGATGTCAT+TGG - chr7_4:49899646-49899665 Msa1160140:CDS 35.0%
GGTTTATCTAATAGGTTTGC+AGG + chr7_4:49899763-49899782 None:intergenic 35.0%
TGTGGTTGAAAAAGATCAAC+TGG - chr7_4:49899801-49899820 Msa1160140:intron 35.0%
! TTGTTTCTCTAGCTGATTCT+CGG + chr7_4:49899863-49899882 None:intergenic 35.0%
ACTGGAGAAATTTACAGTGA+AGG - chr7_4:49900192-49900211 Msa1160140:CDS 35.0%
CAAAAGATGGAATCTGGAAA+TGG - chr7_4:49900231-49900250 Msa1160140:CDS 35.0%
! TGATTCTTCTTTTCGTTCCT+CGG + chr7_4:49900262-49900281 None:intergenic 35.0%
AGAAGAATCAGTATCAAAGG+AGG - chr7_4:49900272-49900291 Msa1160140:CDS 35.0%
!! TTTCTAGACAGTTTCTGGTT+CGG + chr7_4:49900306-49900325 None:intergenic 35.0%
ACCAGAAACTGTCTAGAAAT+TGG - chr7_4:49900307-49900326 Msa1160140:CDS 35.0%
! TCCAATTTCTAGACAGTTTC+TGG + chr7_4:49900311-49900330 None:intergenic 35.0%
ACTTCTTAGGAGATTCATCA+AGG - chr7_4:49900350-49900369 Msa1160140:CDS 35.0%
!! TCAAGGCATTGGAAAAAGTA+AGG - chr7_4:49900367-49900386 Msa1160140:exon 35.0%
! GGTTCTAATGGTAGATATCT+AGG + chr7_4:49900411-49900430 None:intergenic 35.0%
! TCAATTGAGGCATCAAGATA+TGG - chr7_4:49900452-49900471 Msa1160140:intron 35.0%
CAAGATATGGCAGAAAGAAA+AGG - chr7_4:49900465-49900484 Msa1160140:intron 35.0%
! AAAGAAAAGGCACAGAAGAA+TGG - chr7_4:49900478-49900497 Msa1160140:intron 35.0%
!! TTACATGGAAGTGTTCAGCA+TGG + chr7_4:49896088-49896107 None:intergenic 40.0%
AAAGGCTGAGATTGAATCTG+AGG - chr7_4:49896323-49896342 Msa1160140:CDS 40.0%
! TCATGCAAAGGATGGTTTTC+AGG - chr7_4:49896548-49896567 Msa1160140:CDS 40.0%
CTAGTAGCTATAAAGCGTAG+CGG + chr7_4:49896737-49896756 None:intergenic 40.0%
! TCTTTTGTGGAATCTGCCAT+AGG + chr7_4:49896903-49896922 None:intergenic 40.0%
TATGGCAGATTCCACAAAAG+AGG - chr7_4:49896902-49896921 Msa1160140:CDS 40.0%
! GACTTCATCTTCCTCTTTTG+TGG + chr7_4:49896916-49896935 None:intergenic 40.0%
! ATGGCAGTGATGGGAATAAT+AGG - chr7_4:49897007-49897026 Msa1160140:CDS 40.0%
TTTCTTGATGAGATCCTCAC+AGG + chr7_4:49897096-49897115 None:intergenic 40.0%
!! CAAGTGGCTTTATGCAAACT+TGG + chr7_4:49897120-49897139 None:intergenic 40.0%
GGTCAATGTGATCAGGAAAA+TGG + chr7_4:49897164-49897183 None:intergenic 40.0%
!! TCAAGGAGTATCAGCTGTTA+AGG - chr7_4:49897206-49897225 Msa1160140:CDS 40.0%
TATGCTTACTGCTCTCTTCA+TGG - chr7_4:49897237-49897256 Msa1160140:CDS 40.0%
TGAAGCTCTTTGTGTCAATG+AGG - chr7_4:49897286-49897305 Msa1160140:CDS 40.0%
GTCACAAAAGTCCACGAAAA+AGG - chr7_4:49897323-49897342 Msa1160140:CDS 40.0%
CAAAAGTCCACGAAAAAGGA+TGG - chr7_4:49897327-49897346 Msa1160140:CDS 40.0%
GATGGCAGATCAAAACAAGT+TGG - chr7_4:49897345-49897364 Msa1160140:CDS 40.0%
GAGAGTTACCATCTTTACTG+TGG + chr7_4:49897407-49897426 None:intergenic 40.0%
CATTCATTAACTGTGGATGG+TGG + chr7_4:49897486-49897505 None:intergenic 40.0%
TCGCATTCATTAACTGTGGA+TGG + chr7_4:49897489-49897508 None:intergenic 40.0%
AGTGTCGCATTCATTAACTG+TGG + chr7_4:49897493-49897512 None:intergenic 40.0%
CAAAGACAAACATATGGTGC+CGG - chr7_4:49897518-49897537 Msa1160140:CDS 40.0%
TTTACACAAGAGCCTAAACC+TGG - chr7_4:49897564-49897583 Msa1160140:CDS 40.0%
CTAGTAGTACTACCAGGTTT+AGG + chr7_4:49897579-49897598 None:intergenic 40.0%
AGTACTACTAGTGTGGCATT+TGG - chr7_4:49897588-49897607 Msa1160140:CDS 40.0%
TAAGGTTCCTCTTGTCGAAA+AGG - chr7_4:49897698-49897717 Msa1160140:CDS 40.0%
GTCGAAAAGGAAAAAGAAGG+TGG - chr7_4:49897711-49897730 Msa1160140:CDS 40.0%
AAAGGAAAAAGAAGGTGGAG+AGG - chr7_4:49897716-49897735 Msa1160140:CDS 40.0%
AGGAAAGGTCTTCAACTTCA+GGG + chr7_4:49897860-49897879 None:intergenic 40.0%
TTGAATGACCATCAGAGGAA+AGG + chr7_4:49897875-49897894 None:intergenic 40.0%
AGATCTTGAATGACCATCAG+AGG + chr7_4:49897880-49897899 None:intergenic 40.0%
GATGGTCATTCAAGATCTAG+AGG - chr7_4:49897882-49897901 Msa1160140:CDS 40.0%
TAGAGGCAATGAAACAGATG+AGG - chr7_4:49897899-49897918 Msa1160140:CDS 40.0%
! GAGGTACTCTTAGAAAAGAG+TGG - chr7_4:49897918-49897937 Msa1160140:CDS 40.0%
GTACTCTTAGAAAAGAGTGG+AGG - chr7_4:49897921-49897940 Msa1160140:CDS 40.0%
AGGAGATTCTGTGAAAGTTG+TGG + chr7_4:49897967-49897986 None:intergenic 40.0%
!! TTTTGTTTGCTCTCCACCTT+CGG + chr7_4:49897999-49898018 None:intergenic 40.0%
TGGAGAGCAAACAAAAAAGC+TGG - chr7_4:49898003-49898022 Msa1160140:CDS 40.0%
AGAGGATTACCTTCTTCAGA+TGG + chr7_4:49898031-49898050 None:intergenic 40.0%
AACTTTCTCTGCTTCGAAGT+TGG + chr7_4:49898129-49898148 None:intergenic 40.0%
AGAGGAAAAAATCTGAGGAG+TGG - chr7_4:49898174-49898193 Msa1160140:CDS 40.0%
! CCATTTTCAGCATCTTGAAG+TGG + chr7_4:49898296-49898315 None:intergenic 40.0%
CCACTTCAAGATGCTGAAAA+TGG - chr7_4:49898293-49898312 Msa1160140:CDS 40.0%
! TTCTTCCTTGCTATGATTCG+AGG + chr7_4:49898378-49898397 None:intergenic 40.0%
AGCAAGGAAGAAATAAACGG+TGG - chr7_4:49898386-49898405 Msa1160140:CDS 40.0%
AGGAAGAAATAAACGGTGGA+AGG - chr7_4:49898390-49898409 Msa1160140:CDS 40.0%
GGAAGAAATAAACGGTGGAA+GGG - chr7_4:49898391-49898410 Msa1160140:CDS 40.0%
TTGAGGTAACTGAGAGAGAA+AGG - chr7_4:49898417-49898436 Msa1160140:CDS 40.0%
AATATCCTAGTGTCGCAAAC+CGG + chr7_4:49898524-49898543 None:intergenic 40.0%
GTAGTACTCGTACCATGTTT+AGG + chr7_4:49898626-49898645 None:intergenic 40.0%
AGTACTACTGATGTGCCATA+TGG - chr7_4:49898638-49898657 Msa1160140:CDS 40.0%
TAAGCTTCCCTTTGTTGGTA+AGG - chr7_4:49898748-49898767 Msa1160140:CDS 40.0%
CAAGATGATGTCGCGTTTAA+TGG - chr7_4:49898788-49898807 Msa1160140:CDS 40.0%
TTGAACGATCATCAGAAGAG+AGG + chr7_4:49898937-49898956 None:intergenic 40.0%
AGGAGTTTCTGTGAAACTTG+TGG + chr7_4:49899029-49899048 None:intergenic 40.0%
! TCCTAAAGAAGCACAGAAGA+CGG - chr7_4:49899045-49899064 Msa1160140:CDS 40.0%
! GTCAATTCTCTTGGTCTTCT+TGG + chr7_4:49899160-49899179 None:intergenic 40.0%
! GCATCTGAAGTCAATTCTCT+TGG + chr7_4:49899169-49899188 None:intergenic 40.0%
!! AACTTTTTCCCCTTCGAAGT+TGG + chr7_4:49899191-49899210 None:intergenic 40.0%
GGAAGAGAGAAAAAAATCGG+AGG - chr7_4:49899231-49899250 Msa1160140:CDS 40.0%
AGAGAAAAAAATCGGAGGAG+TGG - chr7_4:49899236-49899255 Msa1160140:CDS 40.0%
GCTTGACTATGCACTTCAAA+AGG - chr7_4:49899261-49899280 Msa1160140:CDS 40.0%
TGTCTTGGCAGATAAAAGTG+AGG + chr7_4:49899440-49899459 None:intergenic 40.0%
TTATCTGCCAAGACATTGCT+TGG - chr7_4:49899445-49899464 Msa1160140:CDS 40.0%
TATAAACAGTTGTCACGAGG+AGG - chr7_4:49899567-49899586 Msa1160140:CDS 40.0%
AAAACCAAGGATGTCATTGG+TGG - chr7_4:49899649-49899668 Msa1160140:CDS 40.0%
GTGATCTTACAAGACCATTC+AGG + chr7_4:49899711-49899730 None:intergenic 40.0%
GATTCTACTACAGCACTTCT+GGG + chr7_4:49899841-49899860 None:intergenic 40.0%
GAGAATCAGCTAGAGAAACA+AGG - chr7_4:49899862-49899881 Msa1160140:intron 40.0%
TTCCAAGACATCAACTGATG+TGG - chr7_4:49899945-49899964 Msa1160140:intron 40.0%
ACAAGAGAAACTTCTGTCTC+TGG - chr7_4:49900003-49900022 Msa1160140:intron 40.0%
GGCATATCTTGAATAACCAC+AGG + chr7_4:49900039-49900058 None:intergenic 40.0%
! TCTTGATGGCTTCAATCTGT+CGG + chr7_4:49900101-49900120 None:intergenic 40.0%
ACAGATTGAAGCCATCAAGA+TGG - chr7_4:49900101-49900120 Msa1160140:intron 40.0%
AACAGCACAATTGACAGAAC+TGG - chr7_4:49900174-49900193 Msa1160140:CDS 40.0%
TAGGAGATTCATCAAGGCAT+TGG - chr7_4:49900356-49900375 Msa1160140:CDS 40.0%
GTAGATATCTAGGCTCTCTT+GGG + chr7_4:49900401-49900420 None:intergenic 40.0%
! TCTTCTGAATCGGGTTCTAA+TGG + chr7_4:49900423-49900442 None:intergenic 40.0%
GCTTGATTATGCACTTAGAC+AGG - chr7_4:49900503-49900522 Msa1160140:five_prime_UTR 40.0%
TTTCCAAATTAACCCCAGCT+AGG - chr7_4:49900529-49900548 Msa1160140:five_prime_UTR 40.0%
TGAGGAAGTGATTGAAGCAG+AGG - chr7_4:49896341-49896360 Msa1160140:CDS 45.0%
CTTCAAAGATTGTCCAGCAG+AGG - chr7_4:49896441-49896460 Msa1160140:CDS 45.0%
AAAGATTGTCCAGCAGAGGA+AGG - chr7_4:49896445-49896464 Msa1160140:CDS 45.0%
GGCATCACCCAATTACATGA+AGG - chr7_4:49896512-49896531 Msa1160140:CDS 45.0%
CCAGTGGCCTTCATGTAATT+GGG + chr7_4:49896522-49896541 None:intergenic 45.0%
ACCAGTGGCCTTCATGTAAT+TGG + chr7_4:49896523-49896542 None:intergenic 45.0%
CTTTGCATGAGAACTACCAG+TGG + chr7_4:49896538-49896557 None:intergenic 45.0%
CACTGGTAGTTCTCATGCAA+AGG - chr7_4:49896536-49896555 Msa1160140:CDS 45.0%
GGTAGTTCTCATGCAAAGGA+TGG - chr7_4:49896540-49896559 Msa1160140:CDS 45.0%
AATCCACTGATGGCAGTGAT+GGG - chr7_4:49896998-49897017 Msa1160140:CDS 45.0%
AGGAACAGTACAAGTGATGC+CGG - chr7_4:49897027-49897046 Msa1160140:CDS 45.0%
!! GACTCTTTGGGACTTGTTAC+CGG + chr7_4:49897049-49897068 None:intergenic 45.0%
GATTAAGCTTGAAGCCTGTG+AGG - chr7_4:49897079-49897098 Msa1160140:CDS 45.0%
!! CTTGATAGTGGAAGAGCAAG+TGG + chr7_4:49897136-49897155 None:intergenic 45.0%
CACTTGCTCTTCCACTATCA+AGG - chr7_4:49897134-49897153 Msa1160140:CDS 45.0%
GAGAACTACTTCCCTCTTGA+GGG + chr7_4:49897188-49897207 None:intergenic 45.0%
TGAGAACTACTTCCCTCTTG+AGG + chr7_4:49897189-49897208 None:intergenic 45.0%
CAAGAGGGAAGTAGTTCTCA+AGG - chr7_4:49897189-49897208 Msa1160140:CDS 45.0%
!! TGATCTGCCATCCTTTTTCG+TGG + chr7_4:49897337-49897356 None:intergenic 45.0%
CGGCACCATATGTTTGTCTT+TGG + chr7_4:49897520-49897539 None:intergenic 45.0%
ACCTGGTAGTACTACTAGTG+TGG - chr7_4:49897581-49897600 Msa1160140:CDS 45.0%
! TAGTGTGGCATTTGGAGTTC+AGG - chr7_4:49897596-49897615 Msa1160140:CDS 45.0%
GGTGGAGAGGAAGATAATGA+AGG - chr7_4:49897729-49897748 Msa1160140:CDS 45.0%
GAGGAAAGGTCTTCAACTTC+AGG + chr7_4:49897861-49897880 None:intergenic 45.0%
GTTGAAGACCTTTCCTCTGA+TGG - chr7_4:49897864-49897883 Msa1160140:CDS 45.0%
!! ATCTCCTAAAGAAGTGCCGA+AGG - chr7_4:49897980-49897999 Msa1160140:CDS 45.0%
GCATCTGAAGGCAATTGTCT+TGG + chr7_4:49898107-49898126 None:intergenic 45.0%
TCCTCTCTTCTGATGTTTGG+CGG + chr7_4:49898160-49898179 None:intergenic 45.0%
GTCACTCTTTGTCTTTGAGC+AGG + chr7_4:49898242-49898261 None:intergenic 45.0%
TGCTTCCTCGAATCATAGCA+AGG - chr7_4:49898370-49898389 Msa1160140:CDS 45.0%
! AAACGGTGGAAGGGATTTTG+AGG - chr7_4:49898400-49898419 Msa1160140:CDS 45.0%
GGTTTGCGACACTAGGATAT+TGG - chr7_4:49898523-49898542 Msa1160140:CDS 45.0%
TTGCGACACTAGGATATTGG+AGG - chr7_4:49898526-49898545 Msa1160140:CDS 45.0%
AACAGCCGAAGGCGAAAATA+TGG - chr7_4:49898556-49898575 Msa1160140:CDS 45.0%
! TGGCTCCATATTTTCGCCTT+CGG + chr7_4:49898564-49898583 None:intergenic 45.0%
!! CTGAAGAGTATTGTGCAGGA+AGG - chr7_4:49898599-49898618 Msa1160140:CDS 45.0%
TCTCTTTCCTGCACTCCATA+TGG + chr7_4:49898656-49898675 None:intergenic 45.0%
GATGATGTCGCGTTTAATGG+AGG - chr7_4:49898791-49898810 Msa1160140:CDS 45.0%
CAGTGAAACAGACTCGGATA+TGG - chr7_4:49898838-49898857 Msa1160140:CDS 45.0%
TCCGTCTTCTGTGCTTCTTT+AGG + chr7_4:49899049-49899068 None:intergenic 45.0%
CGGAGAACAAACCAAAAAGC+TGG - chr7_4:49899065-49899084 Msa1160140:CDS 45.0%
! TTCAGATGGCTCCAGCTTTT+TGG + chr7_4:49898017-49898036 None:intergenic 45.0%
ACTTCAGATGCCAACTTCGA+AGG - chr7_4:49899178-49899197 Msa1160140:CDS 45.0%
CTTCAGATGCCAACTTCGAA+GGG - chr7_4:49898117-49898136 Msa1160140:CDS 45.0%
TTCAGATGCCAACTTCGAAG+GGG - chr7_4:49898118-49898137 Msa1160140:CDS 45.0%
TTCTCTCTTCCGATGTTTGG+CGG + chr7_4:49899222-49899241 None:intergenic 45.0%
GTCACTCTTTGTCTTTGAGC+TGG + chr7_4:49898242-49898261 None:intergenic 45.0%
TTCTGCAACAGTGGAATCTC+AGG - chr7_4:49899387-49899406 Msa1160140:CDS 45.0%
GGAGGCTCCAACCAAAAAAT+TGG - chr7_4:49899585-49899604 Msa1160140:CDS 45.0%
ATGACCACCAATGACATCCT+TGG + chr7_4:49899656-49899675 None:intergenic 45.0%
! AAGGATGTCATTGGTGGTCA+TGG - chr7_4:49899655-49899674 Msa1160140:CDS 45.0%
AATAGGTTTGCAGGGACTTC+TGG + chr7_4:49899754-49899773 None:intergenic 45.0%
GGATTCTACTACAGCACTTC+TGG + chr7_4:49899842-49899861 None:intergenic 45.0%
GTTCACGGTGTTTAAGCACA+TGG - chr7_4:49899900-49899919 Msa1160140:intron 45.0%
! TGCCACATCAGTTGATGTCT+TGG + chr7_4:49899950-49899969 None:intergenic 45.0%
TGCGTCTTCTACCATCTTGA+TGG + chr7_4:49900115-49900134 None:intergenic 45.0%
! ATTGTGCTGTTGTCAGGAAG+TGG + chr7_4:49900165-49900184 None:intergenic 45.0%
! CTGTCAATTGTGCTGTTGTC+AGG + chr7_4:49900171-49900190 None:intergenic 45.0%
ATCTGGAAATGGAATAGCCG+AGG - chr7_4:49900242-49900261 Msa1160140:CDS 45.0%
GGTAGATATCTAGGCTCTCT+TGG + chr7_4:49900402-49900421 None:intergenic 45.0%
CTTCCTAGCTGGGGTTAATT+TGG + chr7_4:49900535-49900554 None:intergenic 45.0%
! CACTTTTCTCTTCCTAGCTG+GGG + chr7_4:49900544-49900563 None:intergenic 45.0%
!! CCACTTTTCTCTTCCTAGCT+GGG + chr7_4:49900545-49900564 None:intergenic 45.0%
!! TCCACTTTTCTCTTCCTAGC+TGG + chr7_4:49900546-49900565 None:intergenic 45.0%
GAAGAGAAAAGTGGAGCTGT+TGG - chr7_4:49900551-49900570 Msa1160140:five_prime_UTR 45.0%
CCCAATTACATGAAGGCCAC+TGG - chr7_4:49896519-49896538 Msa1160140:CDS 50.0%
CTATGTAGTCAATCGCGGAG+AGG - chr7_4:49896620-49896639 Msa1160140:CDS 50.0%
GAATCCACTGATGGCAGTGA+TGG - chr7_4:49896997-49897016 Msa1160140:CDS 50.0%
ATTCCCATCACTGCCATCAG+TGG + chr7_4:49897004-49897023 None:intergenic 50.0%
TGAGGGAGGTCAATGTGATC+AGG + chr7_4:49897171-49897190 None:intergenic 50.0%
TCACATTGACCTCCCTCAAG+AGG - chr7_4:49897173-49897192 Msa1160140:CDS 50.0%
CACATTGACCTCCCTCAAGA+GGG - chr7_4:49897174-49897193 Msa1160140:CDS 50.0%
AACTACTTCCCTCTTGAGGG+AGG + chr7_4:49897185-49897204 None:intergenic 50.0%
TCTCTTCATGGTCATCGCCA+TGG - chr7_4:49897249-49897268 Msa1160140:CDS 50.0%
GACACAAAGAGCTTCAACGG+AGG + chr7_4:49897282-49897301 None:intergenic 50.0%
!! GGAGCATCGTGAGGCTTAAA+AGG + chr7_4:49897465-49897484 None:intergenic 50.0%
GCCACACTAGTAGTACTACC+AGG + chr7_4:49897585-49897604 None:intergenic 50.0%
!! TCCTAAAGAAGTGCCGAAGG+TGG - chr7_4:49897983-49898002 Msa1160140:CDS 50.0%
TCCACCTTCGGCACTTCTTT+AGG + chr7_4:49897987-49898006 None:intergenic 50.0%
AAGCTGGAGCCATCTGAAGA+AGG - chr7_4:49898019-49898038 Msa1160140:CDS 50.0%
GCTTCGAAGTTGGCATCTGA+AGG + chr7_4:49898119-49898138 None:intergenic 50.0%
ACCGCCAAACATCAGAAGAG+AGG - chr7_4:49898156-49898175 Msa1160140:CDS 50.0%
TGGACCACAGACTTCTGCAA+CGG - chr7_4:49898313-49898332 Msa1160140:CDS 50.0%
! AGTTTCCGGTTTGCGACACT+AGG - chr7_4:49898516-49898535 Msa1160140:CDS 50.0%
CGACACTAGGATATTGGAGG+AGG - chr7_4:49898529-49898548 Msa1160140:CDS 50.0%
!! GCAGCTGAAGAGTATTGTGC+AGG - chr7_4:49898595-49898614 Msa1160140:CDS 50.0%
GTGCAGGAAGGTCCTAAACA+TGG - chr7_4:49898611-49898630 Msa1160140:CDS 50.0%
TGATGTGCCATATGGAGTGC+AGG - chr7_4:49898646-49898665 Msa1160140:CDS 50.0%
GAAGAGAGGTCTTCAGCTTC+AGG + chr7_4:49898923-49898942 None:intergenic 50.0%
ATCGCGATCTTCTGCAACAG+TGG - chr7_4:49899378-49899397 Msa1160140:CDS 50.0%
CTAGAGAAACAAGGCAGCAC+AGG - chr7_4:49899871-49899890 Msa1160140:intron 50.0%
! CTCTGGTGAAAGTACACCTG+TGG - chr7_4:49900020-49900039 Msa1160140:intron 50.0%
GCCACAGCACGATCTTTGAA+GGG + chr7_4:49900060-49900079 None:intergenic 50.0%
CTTCAAAGATCGTGCTGTGG+CGG - chr7_4:49900059-49900078 Msa1160140:intron 50.0%
CCCAGCTAGGAAGAGAAAAG+TGG - chr7_4:49900542-49900561 Msa1160140:five_prime_UTR 50.0%
GAGAAAAGTGGAGCTGTTGG+TGG - chr7_4:49900554-49900573 Msa1160140:five_prime_UTR 50.0%
GTGTGGTTTCCTTCCTCTGC+TGG + chr7_4:49896457-49896476 None:intergenic 55.0%
TCAACGGAGGCAGATCACCA+TGG + chr7_4:49897269-49897288 None:intergenic 55.0%
ACCACAGACTTCTGCAACGG+TGG - chr7_4:49898316-49898335 Msa1160140:CDS 55.0%
TCCACCGTTGCAGAAGTCTG+TGG + chr7_4:49898320-49898339 None:intergenic 55.0%
TTCTGCAACGGTGGAGTCTC+AGG - chr7_4:49898325-49898344 Msa1160140:CDS 55.0%
GAGGAGGAAGTAACAGCCGA+AGG - chr7_4:49898545-49898564 Msa1160140:CDS 55.0%
AACAAGGCAGCACAGGACTG+TGG - chr7_4:49899878-49899897 Msa1160140:intron 55.0%
CAGCACAGGACTGTGGTTCA+CGG - chr7_4:49899885-49899904 Msa1160140:intron 55.0%
GCCCTTCAAAGATCGTGCTG+TGG - chr7_4:49900056-49900075 Msa1160140:intron 55.0%
CGCCACAGCACGATCTTTGA+AGG + chr7_4:49900061-49900080 None:intergenic 55.0%
GAAGTGGCTGTGTGTCTGGA+AGG + chr7_4:49900149-49900168 None:intergenic 55.0%
TCAGGAAGTGGCTGTGTGTC+TGG + chr7_4:49900153-49900172 None:intergenic 55.0%
!! GTGGATGGTGGAGCATCGTG+AGG + chr7_4:49897474-49897493 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 49896076 49900614 49896076 ID=Msa1160140;Name=Msa1160140
chr7_4 mRNA 49896076 49900614 49896076 ID=Msa1160140-mRNA-1;Parent=Msa1160140;Name=Msa1160140-mRNA-1;_AED=0.06;_eAED=0.06;_QI=141|0.5|0.66|1|0.5|0.33|3|0|1301
chr7_4 exon 49896076 49899723 49896076 ID=Msa1160140-mRNA-1:exon:13845;Parent=Msa1160140-mRNA-1
chr7_4 exon 49900121 49900388 49900121 ID=Msa1160140-mRNA-1:exon:13844;Parent=Msa1160140-mRNA-1
chr7_4 exon 49900484 49900614 49900484 ID=Msa1160140-mRNA-1:exon:13843;Parent=Msa1160140-mRNA-1
chr7_4 five_prime_UTR 49900484 49900614 49900484 ID=Msa1160140-mRNA-1:five_prime_utr;Parent=Msa1160140-mRNA-1
chr7_4 five_prime_UTR 49900379 49900388 49900379 ID=Msa1160140-mRNA-1:five_prime_utr;Parent=Msa1160140-mRNA-1
chr7_4 CDS 49900121 49900378 49900121 ID=Msa1160140-mRNA-1:cds;Parent=Msa1160140-mRNA-1
chr7_4 CDS 49896076 49899723 49896076 ID=Msa1160140-mRNA-1:cds;Parent=Msa1160140-mRNA-1
Gene Sequence

>Msa1160140

ATGATGAATCAAAAGGCTGAGATTGAATCTGAGGAAGTGATTGAAGCAGAGGAATCTGATTCTAGCCATCAAGAATACATAGGAAAATTGGAATCTAAGAAGAAAATGAAGAAAGTGAGATCAATGAAGCTTCAAAGATTGTCCAGCAGAGGAAGGAAACCACACTATGATCATAAAGTGATAACAACTGATATGGTAGAGGCATCACCCAATTACATGAAGGCCACTGGTAGTTCTCATGCAAAGGATGGTTTTCAGGGACCTAAATCAACAAAGCAGCTATATTCTGAATCCACTGATGGCAGTGATGGGAATAATAGGAACAGTACAAGTGATGCCGGTAACAAGTCCCAAAGAGTCATGACTAGAAGATTAAGCTTGAAGCCTGTGAGGATCTCATCAAGAAAACCAAGTTTGCATAAAGCCACTTGCTCTTCCACTATCAAGGATTCCCATTTTCCTGATCACATTGACCTCCCTCAAGAGGGAAGTAGTTCTCAAGGAGTATCAGCTGTTAAGGTTTGTACATATGCTTACTGCTCTCTTCATGGTCATCGCCATGGTGATCTGCCTCCGTTGAAGCTCTTTGTGTCAATGAGGAGACGTCAGTTGAAGTCACAAAAGTCCACGAAAAAGGATGGCAGATCAAAACAAGTTGGTAATGCAAGGAAAGCTACTCAGAAAACCAAAACTGTCCACAGTAAAGATGGTAACTCTCAGCAGAATGTGAAAAATGTGGCAACAGAATCATCACCTTTTAAGCCTCACGATGCTCCACCATCCACAGTTAATGAATGCGACACTTCAACCAAAGACAAACATATGGTGCCGGATAATGAATTGCAGCAGAAGAGTTTTACACAAGAGCCTAAACCTGGTAGTACTACTAGTGTGGCATTTGGAGTTCAGGAAAGAGATCAGAAATATATTAAAAAGTGGCATTTGATGTATAAACATGCAGTATTAAGTAATACAGGAAAATGTGAAAATAAGGTTCCTCTTGTCGAAAAGGAAAAAGAAGGTGGAGAGGAAGATAATGAAGGAAACAACTCTTCTTGTCACAATCATAGTGAAACAGAATCAGATATGGATGATGAAAAGAAGAATATAATCGAGCTGGTGCAGAAAGCATTTGATGAGATTCTTCTCCCTGAAGTTGAAGACCTTTCCTCTGATGGTCATTCAAGATCTAGAGGCAATGAAACAGATGAGGTACTCTTAGAAAAGAGTGGAGGTAAAATTGAAGAAAGGAATACCACAACTTTCACAGAATCTCCTAAAGAAGTGCCGAAGGTGGAGAGCAAACAAAAAAGCTGGAGCCATCTGAAGAAGGTAATCCTCTTGAAAAGGTTTGTAAAGGCATTAGAGAAGGTACGAAACATCAACTCAAGAAGACCAAGACAATTGCCTTCAGATGCCAACTTCGAAGCAGAGAAAGTTCTTCTTAACCGCCAAACATCAGAAGAGAGGAAAAAATCTGAGGAGTGGATGCTTGATTATGCACTTCAAAAGGTTATTTCTAAACTCGCACCTGCTCAAAGACAAAGAGTGACACTTTTAGTAGAAGCTTTTGAAACTATTCGTCCACTTCAAGATGCTGAAAATGGACCACAGACTTCTGCAACGGTGGAGTCTCAGGCAAATCCGATTCAATCACTTGATGCTTCCTCGAATCATAGCAAGGAAGAAATAAACGGTGGAAGGGATTTTGAGGTAACTGAGAGAGAAAGGAATGACAAGAATATGGATGCATGTAAGAAAAATGATGAAAGTGCTAATGTGGAATTAACATCAACAGAAGTAGTCAAGTTTCCGGTTTGCGACACTAGGATATTGGAGGAGGAAGTAACAGCCGAAGGCGAAAATATGGAGCCAGATTATAAAGTGCAGCTGAAGAGTATTGTGCAGGAAGGTCCTAAACATGGTACGAGTACTACTGATGTGCCATATGGAGTGCAGGAAAGAGATCAGAGATATATAAAAAAGTGGCATTTGATGTATAAGCATGCAGTATTAAGTAACACAGGAAAATGTGATAATAAGCTTCCCTTTGTTGGTAAGGACAAAGAAGGTAGAGAGCAAGATGATGTCGCGTTTAATGGAGGAAACAGCTCTTCTTTTCACAATTACAGTGAAACAGACTCGGATATGGATGATGAAAAGAAGAATGTAGTTGAGCTTGTGCAAAAAGCATTTGATGAAATTCTTCTACCTGAAGCTGAAGACCTCTCTTCTGATGATCGTTCAAAATCTAGAAGCTACGGCTCAGATGAAGTACTCTTAGAAAAGAGTGAAGGTGAGAGAGAAGAAATGAATGCCACAAGTTTCACAGAAACTCCTAAAGAAGCACAGAAGACGGAGAACAAACCAAAAAGCTGGAGCCATCTGAAAAAGCTAATCATGTTGAAAAGGTTTGTAAAGGCATTAGATAAGGTAAGAAACATCAATCCAAGAAGACCAAGAGAATTGACTTCAGATGCCAACTTCGAAGGGGAAAAAGTTTTTCTTAACCGCCAAACATCGGAAGAGAGAAAAAAATCGGAGGAGTGGATGCTTGACTATGCACTTCAAAAGGTTATTTCTAAACTCGCACCAGCTCAAAGACAAAGAGTGACACTTCTAATAGAAGCTTTTGAAACACTTCGGCCAATTCAAGATGTTGAAAATGGATCGCGATCTTCTGCAACAGTGGAATCTCAGGAAAATCTAAGTCAATCACTTGATGCTTCCTCACTTTTATCTGCCAAGACATTGCTTGGAAAAGTATCATTTTCAAATGACAGTACTATGGAATTTTCTGATAAAGCTAGTGACAATCCAATACCTGAACTTTTAAAGCCTATTAAGCCAGTAGAAACTATAAACAGTTGTCACGAGGAGGCTCCAACCAAAAAATTGGTCGATGAAGTTCCAGAAGATCTTGTATCAGATTTGAATACAAAAACCAAGGATGTCATTGGTGGTCATGGTGAAAAATTTTCTGTGACTAAAAGCTTAATCCTGAATGGTCTTGTAAGATCACTGAGATCTAATTTGGTTGTTCCAGAAGTCCCTGCAAACCTATTAGATAAACCAACAACAGACATTAAAGATGTGGTTGAAAAAGATCAACTGGAAAAATCTGAAGCTCCCAGAAGTGCTGTAGTAGAATCCGAGAATCAGCTAGAGAAACAAGGCAGCACAGGACTGTGGTTCACGGTGTTTAAGCACATGGTATCAGATATGACAGAAAACAATTCCAAGACATCAACTGATGTGGCAGATGAAAAAGATTCAAAGTATGAAGATAGCACAACAAGAGAAACTTCTGTCTCTGGTGAAAGTACACCTGTGGTTATTCAAGATATGCCCTTCAAAGATCGTGCTGTGGCGGATTCTGAAATTGAGCTCCGACAGATTGAAGCCATCAAGATGGTAGAAGACGCAATTGATTCAATCCTTCCAGACACACAGCCACTTCCTGACAACAGCACAATTGACAGAACTGGAGAAATTTACAGTGAAGGCTTGAACCAAAAAGAACAAAAGATGGAATCTGGAAATGGAATAGCCGAGGAACGAAAAGAAGAATCAGTATCAAAGGAGGTAAACAAACCGAACCAGAAACTGTCTAGAAATTGGAGCAATCTTAAAAAAGTGGTACTTCTTAGGAGATTCATCAAGGCATTGGAAAAAGTAAGGAAATTCAACCCAAGAGAGCCTAGATATCTACCATTAGAACCCGATTCAGAAGATGAAAAAGTTCAATTGAGGCATCAAGATATGGCAGAAAGAAAAGGCACAGAAGAATGGATGCTTGATTATGCACTTAGACAGGTTGTTTCCAAATTAACCCCAGCTAGGAAGAGAAAAGTGGAGCTGTTGGTGGAAGCATTCGAGACAGTCGTGCCAACTGTAAAACATTAA
Protein sequence

>Msa1160140

MMNQKAEIESEEVIEAEESDSSHQEYIGKLESKKKMKKVRSMKLQRLSSRGRKPHYDHKVITTDMVEASPNYMKATGSSHAKDGFQGPKSTKQLYSESTDGSDGNNRNSTSDAGNKSQRVMTRRLSLKPVRISSRKPSLHKATCSSTIKDSHFPDHIDLPQEGSSSQGVSAVKVCTYAYCSLHGHRHGDLPPLKLFVSMRRRQLKSQKSTKKDGRSKQVGNARKATQKTKTVHSKDGNSQQNVKNVATESSPFKPHDAPPSTVNECDTSTKDKHMVPDNELQQKSFTQEPKPGSTTSVAFGVQERDQKYIKKWHLMYKHAVLSNTGKCENKVPLVEKEKEGGEEDNEGNNSSCHNHSETESDMDDEKKNIIELVQKAFDEILLPEVEDLSSDGHSRSRGNETDEVLLEKSGGKIEERNTTTFTESPKEVPKVESKQKSWSHLKKVILLKRFVKALEKVRNINSRRPRQLPSDANFEAEKVLLNRQTSEERKKSEEWMLDYALQKVISKLAPAQRQRVTLLVEAFETIRPLQDAENGPQTSATVESQANPIQSLDASSNHSKEEINGGRDFEVTERERNDKNMDACKKNDESANVELTSTEVVKFPVCDTRILEEEVTAEGENMEPDYKVQLKSIVQEGPKHGTSTTDVPYGVQERDQRYIKKWHLMYKHAVLSNTGKCDNKLPFVGKDKEGREQDDVAFNGGNSSSFHNYSETDSDMDDEKKNVVELVQKAFDEILLPEAEDLSSDDRSKSRSYGSDEVLLEKSEGEREEMNATSFTETPKEAQKTENKPKSWSHLKKLIMLKRFVKALDKVRNINPRRPRELTSDANFEGEKVFLNRQTSEERKKSEEWMLDYALQKVISKLAPAQRQRVTLLIEAFETLRPIQDVENGSRSSATVESQENLSQSLDASSLLSAKTLLGKVSFSNDSTMEFSDKASDNPIPELLKPIKPVETINSCHEEAPTKKLVDEVPEDLVSDLNTKTKDVIGGHGEKFSVTKSLILNGLVRSLRSNLVVPEVPANLLDKPTTDIKDVVEKDQLEKSEAPRSAVVESENQLEKQGSTGLWFTVFKHMVSDMTENNSKTSTDVADEKDSKYEDSTTRETSVSGESTPVVIQDMPFKDRAVADSEIELRQIEAIKMVEDAIDSILPDTQPLPDNSTIDRTGEIYSEGLNQKEQKMESGNGIAEERKEESVSKEVNKPNQKLSRNWSNLKKVVLLRRFIKALEKVRKFNPREPRYLPLEPDSEDEKVQLRHQDMAERKGTEEWMLDYALRQVVSKLTPARKRKVELLVEAFETVVPTVKH*