AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1114180

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1114180 MtrunA17_Chr7g0256721 92.107 1305 91 6 18 1320 8 1302 0.0 2381
Msa1114180 MtrunA17_Chr7g0246321 75.688 218 44 4 218 426 1 218 1.41e-94 303
Msa1114180 MtrunA17_Chr7g0246321 69.444 180 48 3 607 780 40 218 8.61e-65 219
Msa1114180 MtrunA17_Chr3g0084941 60.674 89 35 0 1228 1316 565 653 1.02e-25 114
Msa1114180 MtrunA17_Chr3g0084941 38.889 198 102 6 54 249 83 263 1.86e-24 110
Msa1114180 MtrunA17_Chr3g0084941 47.126 87 46 0 816 902 567 653 3.97e-15 80.5
Msa1114180 MtrunA17_Chr3g0084941 47.126 87 46 0 462 548 567 653 1.80e-14 78.6
Msa1114180 MtrunA17_Chr4g0035521 55.670 97 42 1 1224 1319 613 709 6.11e-24 108
Msa1114180 MtrunA17_Chr4g0035521 36.232 138 80 2 776 913 588 717 9.40e-17 85.9
Msa1114180 MtrunA17_Chr4g0035521 49.367 79 40 0 468 546 626 704 4.35e-16 84.0
Msa1114180 MtrunA17_Chr4g0035521 31.193 218 119 4 34 230 29 236 4.66e-13 73.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1114180 AT5G04020.2 33.471 484 235 17 455 925 844 1253 1.19e-46 184
Msa1114180 AT5G04020.2 45.000 180 68 5 1139 1317 1337 1486 3.92e-32 137
Msa1114180 AT5G04020.2 32.780 241 130 6 1074 1314 1021 1229 1.60e-29 128
Msa1114180 AT5G04020.2 33.564 289 163 9 330 609 1028 1296 7.10e-25 113
Msa1114180 AT5G04020.2 55.056 89 40 0 458 546 1395 1483 3.98e-22 104
Msa1114180 AT5G04020.2 51.685 89 43 0 812 900 1395 1483 7.77e-22 103
Msa1114180 AT5G04020.2 53.191 94 42 1 1224 1315 845 938 1.16e-21 103
Msa1114180 AT5G04020.2 40.800 125 65 3 809 932 506 622 2.54e-18 92.0
Msa1114180 AT5G04020.2 47.525 101 44 3 456 555 507 599 1.20e-17 90.1
Msa1114180 AT5G04020.2 45.918 98 46 2 1219 1316 502 592 7.94e-17 87.4
Msa1114180 AT5G04020.1 33.471 484 235 17 455 925 844 1253 1.19e-46 184
Msa1114180 AT5G04020.1 45.000 180 68 5 1139 1317 1337 1486 3.92e-32 137
Msa1114180 AT5G04020.1 32.780 241 130 6 1074 1314 1021 1229 1.60e-29 128
Msa1114180 AT5G04020.1 33.564 289 163 9 330 609 1028 1296 7.10e-25 113
Msa1114180 AT5G04020.1 55.056 89 40 0 458 546 1395 1483 3.98e-22 104
Msa1114180 AT5G04020.1 51.685 89 43 0 812 900 1395 1483 7.77e-22 103
Msa1114180 AT5G04020.1 53.191 94 42 1 1224 1315 845 938 1.16e-21 103
Msa1114180 AT5G04020.1 40.800 125 65 3 809 932 506 622 2.54e-18 92.0
Msa1114180 AT5G04020.1 47.525 101 44 3 456 555 507 599 1.20e-17 90.1
Msa1114180 AT5G04020.1 45.918 98 46 2 1219 1316 502 592 7.94e-17 87.4
Msa1114180 AT2G38800.1 57.647 85 36 0 1232 1316 509 593 9.10e-25 111
Msa1114180 AT2G38800.1 37.864 206 92 10 34 230 39 217 9.04e-21 99.0
Msa1114180 AT2G38800.1 47.826 92 44 1 457 548 506 593 2.43e-18 91.3
Msa1114180 AT2G38800.1 37.500 152 79 4 752 902 457 593 3.20e-18 90.9
Msa1114180 AT3G54570.1 57.895 76 32 0 1241 1316 341 416 3.61e-20 95.5
Msa1114180 AT3G54570.1 30.811 185 100 3 48 232 30 186 1.87e-13 74.7
Msa1114180 AT3G54570.1 44.737 76 42 0 827 902 341 416 1.17e-12 72.0
Msa1114180 AT3G54570.1 30.526 190 110 4 381 548 227 416 1.13e-11 68.9

Find 242 sgRNAs with CRISPR-Local

Find 311 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCAATTTCTAGACAGTTTC+TGG 0.106013 7_3:+60880481 None:intergenic
CTTCCTAGCCGGGGTTAATT+TGG 0.166463 7_3:+60880257 None:intergenic
ACCAGTGGCCTTCATGTAAT+TGG 0.171119 7_3:+60884299 None:intergenic
TATTCAAGATATGCCCTTTA+AGG 0.179898 7_3:-60880745 Msa1114180:CDS
GTCAATTCTCTTGGTCTTCT+TGG 0.181117 7_3:+60881632 None:intergenic
CGCTACAGCACGATCCTTAA+AGG 0.196940 7_3:+60880731 None:intergenic
TATAGCTGCTTTGTTGATTT+AGG 0.201282 7_3:+60883819 None:intergenic
AAGATCACTGAGATCTAATT+TGG 0.203250 7_3:-60881066 Msa1114180:CDS
ATCTTCTAGTCATGACTCTT+TGG 0.235373 7_3:+60883730 None:intergenic
CCAATTCAAGATGCTGAAAA+TGG 0.240095 7_3:-60881434 Msa1114180:CDS
CAAGATGATGTCGCGTTTAA+TGG 0.246289 7_3:-60882001 Msa1114180:CDS
TCAAGAATACATAGGAAAAT+TGG 0.253677 7_3:-60884439 Msa1114180:CDS
ATAGTTTCTACTGGCTTAAT+AGG 0.259146 7_3:+60881242 None:intergenic
GGTCAATGTGATCAGGAAAA+TGG 0.275419 7_3:+60883628 None:intergenic
CTGTTGTTGGTTCATCTAAT+AGG 0.279218 7_3:+60881021 None:intergenic
AGAAAGGAATGACAAGAATA+TGG 0.282531 7_3:-60882356 Msa1114180:CDS
CCACTTCAAGATGCTGAAAA+TGG 0.285607 7_3:-60882496 Msa1114180:CDS
ACCAGAAACTGTCTAGAAAT+TGG 0.290294 7_3:-60880482 Msa1114180:CDS
TGCGTCTTCTACCATCTTGA+TGG 0.291579 7_3:+60880677 None:intergenic
AAATCTGATGCCAGATCTTC+TGG 0.302875 7_3:+60881170 None:intergenic
GTGATCTTACAAGACCATTC+AGG 0.324754 7_3:+60881081 None:intergenic
TCCACCTTCGGCACTTCTTT+AGG 0.325409 7_3:+60882805 None:intergenic
TACAGGAAAATGTGAAAATA+AGG 0.329040 7_3:-60883109 Msa1114180:CDS
GAGGAAAGGTCTTCAACTTC+AGG 0.331667 7_3:+60882931 None:intergenic
AACAGCCGAAGGCGAAAATA+TGG 0.331949 7_3:-60882233 Msa1114180:CDS
AACAGAAGTAGTCAAGTTTC+CGG 0.332191 7_3:-60882287 Msa1114180:CDS
GAAGAGAGGTCTTCAGCTTC+AGG 0.339503 7_3:+60881869 None:intergenic
TTGTTTCTCTAGCTGATTCT+CGG 0.340174 7_3:+60880929 None:intergenic
TGGCACCATATGCTTGTCTT+TGG 0.345821 7_3:+60883272 None:intergenic
GGTTTGCGACACTAGGATAT+TGG 0.346949 7_3:-60882266 Msa1114180:CDS
TCAGGAAGTGGCTGTGTGTC+TGG 0.347530 7_3:+60880639 None:intergenic
TCCGTCTTCTGTGCTTCTTT+AGG 0.348495 7_3:+60881743 None:intergenic
GGCACAAAAGTCCACGAAAA+AGG 0.348503 7_3:-60883466 Msa1114180:CDS
GATAATAAGCTTCCCTTTGT+TGG 0.352376 7_3:-60882046 Msa1114180:CDS
GTGTGGTTTCCTTCCTCTGC+TGG 0.355186 7_3:+60884365 None:intergenic
TCTTCTGAATCGGGTTCTAA+TGG 0.357240 7_3:+60880369 None:intergenic
TATGCTTACTGCTCTCTTCA+TGG 0.358373 7_3:-60883552 Msa1114180:CDS
TCTTCTAGTCATGACTCTTT+GGG 0.359745 7_3:+60883731 None:intergenic
ATCTGCACTGTGGACAGTTT+CGG 0.361904 7_3:+60883395 None:intergenic
AAAGAACAAAAGATGGAATC+TGG 0.362063 7_3:-60880564 Msa1114180:CDS
CTGTCAATTGTTCTGTTGTC+AGG 0.363484 7_3:+60880621 None:intergenic
CTTCACTTGATGTGGAGAAT+TGG 0.367412 7_3:+60884682 None:intergenic
AACTTCATCAATCGTTCGTT+TGG 0.368284 7_3:+60881193 None:intergenic
TTCTGCAACGGTGGAGTCTC+AGG 0.372685 7_3:-60882464 Msa1114180:CDS
TTCAGCTGCACTTTATAATC+TGG 0.374274 7_3:+60882208 None:intergenic
TCAAGGAGTATCAGCTGTTA+AGG 0.374415 7_3:-60883583 Msa1114180:CDS
ATGGCAGTGATGGGAATAAT+AGG 0.374440 7_3:-60883782 Msa1114180:CDS
TAAAGTGATAACAACTGATA+TGG 0.376333 7_3:-60884334 Msa1114180:CDS
TTAATAGGCTTGCAAAGTTC+AGG 0.387230 7_3:+60881257 None:intergenic
TTCCACATCAGTTGATGTCT+TGG 0.400640 7_3:+60880842 None:intergenic
GTCACTCTTTGTCTTTGAGC+AGG 0.403744 7_3:+60881488 None:intergenic
GTCACTCTTTGTCTTTGAGC+AGG 0.403744 7_3:+60882550 None:intergenic
ATTCTCAAATGATAGTACTA+TGG 0.404110 7_3:-60881312 Msa1114180:CDS
GGAGTGTCATGAGGCTTAAA+AGG 0.404951 7_3:+60883327 None:intergenic
TTCTGCAACAGTGGAATCTC+AGG 0.406186 7_3:-60881402 Msa1114180:CDS
TTGAGGTAACTGAGAGAGAA+AGG 0.412316 7_3:-60882372 Msa1114180:CDS
GGTAGATATCTAGGCTCTCT+TGG 0.413052 7_3:+60880390 None:intergenic
CATGTTGAAAAGGTTTATAA+AGG 0.413873 7_3:-60881681 Msa1114180:CDS
CAAGTGGCTTTATGCAAACT+TGG 0.417355 7_3:+60883672 None:intergenic
TTCTTCCTTGCTATGATTCG+AGG 0.417434 7_3:+60882414 None:intergenic
TTTCTAGACAGTTTCTGGTT+CGG 0.425984 7_3:+60880486 None:intergenic
GATTATCATTATTTATCATC+AGG 0.426103 7_3:-60884631 Msa1114180:intron
AATAGGTTTGAAGGAGCATC+TGG 0.428182 7_3:+60881038 None:intergenic
GATTCTACAACAGCACTTGT+AGG 0.430522 7_3:+60880951 None:intergenic
CAGTGAAACAGACTCGGATA+TGG 0.431278 7_3:-60881951 Msa1114180:CDS
AACTTTCTCTGCTTCGAAGT+TGG 0.435193 7_3:+60882663 None:intergenic
TAGGAGATTCATCAAGGCAT+TGG 0.436395 7_3:-60880433 Msa1114180:CDS
TAAGCTTCCCTTTGTTGGTA+AGG 0.436775 7_3:-60882041 Msa1114180:CDS
TAAGGTTCCTCTTGTCGAAA+AGG 0.436998 7_3:-60883091 Msa1114180:CDS
AACAGAACAATTGACAGAAC+TGG 0.437768 7_3:-60880615 Msa1114180:CDS
CAAAAGATGGAATCTGGAAA+TGG 0.438745 7_3:-60880558 Msa1114180:CDS
TCAATTGAGGCATCAAGATA+TGG 0.438891 7_3:-60880337 Msa1114180:CDS
GCTTGATTATGCACTTCAAA+AGG 0.440589 7_3:-60882590 Msa1114180:CDS
GCATCTGAAGTCAATTCTCT+TGG 0.443920 7_3:+60881623 None:intergenic
GGTTCTAATGGTAGATATCT+AGG 0.445208 7_3:+60880381 None:intergenic
GAGAACTACTTCCCTCTTGA+GGG 0.446950 7_3:+60883604 None:intergenic
TTCTCTCTTCCGATGTTTGG+CGG 0.448219 7_3:+60881570 None:intergenic
CACTTGCTCTTCCACTATCA+AGG 0.450193 7_3:-60883655 Msa1114180:CDS
TCTCTTTCCTGCACTCCATA+TGG 0.455808 7_3:+60882136 None:intergenic
CATGCAGTATTAAGTAATAC+AGG 0.456042 7_3:-60883126 Msa1114180:CDS
GTAGTACTCGTACCATGTTT+AGG 0.456804 7_3:+60882166 None:intergenic
TCATCAATCGTTCGTTTGGT+TGG 0.456870 7_3:+60881197 None:intergenic
TGATGAAGTTCCAGAAGATC+TGG 0.458952 7_3:-60881180 Msa1114180:CDS
GGTTCATCTAATAGGTTTGA+AGG 0.459383 7_3:+60881029 None:intergenic
GCATCTGAAGGCAATTGTCT+TGG 0.460907 7_3:+60882685 None:intergenic
AAAAGCTAATCATGTTGAAA+AGG 0.461501 7_3:-60881691 Msa1114180:CDS
TAGTGAAACAGAATCAGATA+TGG 0.464737 7_3:-60883013 Msa1114180:CDS
CAACTGCTTATAGTTTCTAC+TGG 0.464819 7_3:+60881233 None:intergenic
GCTTGACTATGCACTTCAAA+AGG 0.468681 7_3:-60881528 Msa1114180:CDS
GGCTTGCAAAGTTCAGGCAT+TGG 0.469075 7_3:+60881263 None:intergenic
TTCTGCAGCACTTCATAGTC+TGG 0.470784 7_3:+60883252 None:intergenic
GTTTATAAAGGCATTAGATA+AGG 0.476008 7_3:-60881669 Msa1114180:CDS
ATTGTTCTGTTGTCAGGAAG+TGG 0.476045 7_3:+60880627 None:intergenic
CTTGTAGTACTGCTAGGTTT+AGG 0.477872 7_3:+60883213 None:intergenic
GTCAATGTGATCAGGAAAAT+GGG 0.478638 7_3:+60883629 None:intergenic
GCTTGATTATGCACTTAGAC+AGG 0.478746 7_3:-60880286 Msa1114180:CDS
ACGTCTTTGATGTCTGTTGT+TGG 0.479455 7_3:+60881008 None:intergenic
CCAGTGGCCTTCATGTAATT+GGG 0.479643 7_3:+60884300 None:intergenic
GTAGATATCTAGGCTCTCTT+GGG 0.482666 7_3:+60880391 None:intergenic
GTTGAAGACCTTTCCTCTGA+TGG 0.482829 7_3:-60882925 Msa1114180:CDS
ACTAAAAGCTTAATCCTGAA+TGG 0.485637 7_3:-60881095 Msa1114180:CDS
TTATCTGCTAAGACATTGCT+TGG 0.488038 7_3:-60881344 Msa1114180:CDS
TGAGGGAGGTCAATGTGATC+AGG 0.489122 7_3:+60883621 None:intergenic
ACCACAGACTTCTGCAACGG+TGG 0.490631 7_3:-60882473 Msa1114180:CDS
AAAATGGGAATCCTTGATAG+TGG 0.492843 7_3:+60883644 None:intergenic
GCTACAGCACGATCCTTAAA+GGG 0.494274 7_3:+60880732 None:intergenic
CCTCTTGAAAAGGTTTGTAA+AGG 0.495617 7_3:-60882743 Msa1114180:CDS
TTTCTTGATGAGATCCTCAC+AGG 0.500070 7_3:+60883696 None:intergenic
AGAAGGTAATCCTCTTGAAA+AGG 0.500374 7_3:-60882753 Msa1114180:CDS
AAAGAAAAGGCACAGAAGAA+TGG 0.501317 7_3:-60880311 Msa1114180:CDS
CTAGAGAAACAAGGCAGCAC+AGG 0.502444 7_3:-60880918 Msa1114180:CDS
GTGGAGGTAAAATTGAAGAA+AGG 0.504281 7_3:-60882852 Msa1114180:CDS
CATAGCAAGGAAGAAATAAA+CGG 0.505001 7_3:-60882406 Msa1114180:CDS
TTCTTTGTCCTTACCAACAA+AGG 0.506662 7_3:+60882033 None:intergenic
GAGAAAAGTGGAGCTGTTGG+TGG 0.508165 7_3:-60880235 Msa1114180:CDS
ATGACCACCAATGACATCCT+TGG 0.508562 7_3:+60881136 None:intergenic
CAAGATATGGCAGAAAGAAA+AGG 0.510869 7_3:-60880324 Msa1114180:CDS
CTTCAGATGCCAACATCGAA+GGG 0.511621 7_3:-60881610 Msa1114180:CDS
TGAGAACTACTTCCCTCTTG+AGG 0.517001 7_3:+60883603 None:intergenic
CATTCATTAACTGTGGATGA+TGG 0.519258 7_3:+60883306 None:intergenic
AATATCCTAGTGTCGCAAAC+CGG 0.519985 7_3:+60882268 None:intergenic
AGAGGATTACCTTCTTCAGA+TGG 0.520545 7_3:+60882761 None:intergenic
TCTTTGTCCTTACCAACAAA+GGG 0.524211 7_3:+60882034 None:intergenic
AGGAGTAGTACAAGTGATGC+TGG 0.529305 7_3:-60883762 Msa1114180:CDS
GAATCCACTGATGGCAGTGA+TGG 0.533653 7_3:-60883792 Msa1114180:CDS
AGGAGTTTCTGTGAAACTTG+TGG 0.533876 7_3:+60881763 None:intergenic
AAGTGTGGCATATGGAGTGC+AGG 0.534610 7_3:-60883193 Msa1114180:CDS
ATCGACACAAAGCGCTTCAA+CGG 0.536927 7_3:+60883507 None:intergenic
CGACACTAGGATATTGGAGG+AGG 0.537280 7_3:-60882260 Msa1114180:CDS
CGTTCAAAATCTAGAAGCTA+CGG 0.537295 7_3:-60881839 Msa1114180:CDS
AGTACTACTGATGTGCCATA+TGG 0.538348 7_3:-60882151 Msa1114180:CDS
CAGCACAGGACTGTGGTTCA+CGG 0.538685 7_3:-60880904 Msa1114180:CDS
AGGAGATTCTGTGAAAGTTG+TGG 0.538777 7_3:+60882825 None:intergenic
AGTACTACAAGTGTGGCATA+TGG 0.539018 7_3:-60883201 Msa1114180:CDS
GGTGGAGAGGAAGATAATGA+AGG 0.539857 7_3:-60883060 Msa1114180:CDS
GATGAGGAGACGTCAGTTGA+AGG 0.540218 7_3:-60883487 Msa1114180:CDS
CAAGAGGGAAGTAGTTCTCA+AGG 0.542390 7_3:-60883600 Msa1114180:CDS
TTTGTTGGTAAGGACAAAGA+AGG 0.544205 7_3:-60882031 Msa1114180:CDS
AAAAGAAGAATCAGTATCAA+AGG 0.544289 7_3:-60880520 Msa1114180:CDS
TGAGGAAGTGATTGAATCAG+AGG 0.545753 7_3:-60884478 Msa1114180:CDS
GCTTCGAAGTTGGCATCTGA+AGG 0.550873 7_3:+60882673 None:intergenic
CACTGGTAGTTCTCATGCAA+AGG 0.551656 7_3:-60884283 Msa1114180:CDS
GCAGCTGAAGAGTATTGTGC+AGG 0.551712 7_3:-60882194 Msa1114180:CDS
ACTTCAGATGCCAACATCGA+AGG 0.551910 7_3:-60881611 Msa1114180:CDS
AAAGACTGAGATTGAATCTG+AGG 0.553297 7_3:-60884496 Msa1114180:CDS
GAAGCATCAAGTGATTGAAT+CGG 0.553368 7_3:+60882436 None:intergenic
TTCAACCAAAGACAAGCATA+TGG 0.553495 7_3:-60883277 Msa1114180:CDS
AAGGATGTCATTGGTGGTCA+TGG 0.553583 7_3:-60881134 Msa1114180:CDS
AAAGAAGAATATAATCGAGC+TGG 0.554083 7_3:-60882983 Msa1114180:CDS
AAATGATGAAAGTGCTAATG+TGG 0.554554 7_3:-60882320 Msa1114180:CDS
AGGAAAGGTCTTCAACTTCA+GGG 0.556196 7_3:+60882932 None:intergenic
CCCAATTACATGAAGGCCAC+TGG 0.558174 7_3:-60884300 Msa1114180:CDS
GAAGAGAAAAGTGGAGCTGT+TGG 0.558888 7_3:-60880238 Msa1114180:CDS
ACTTCTTAGGAGATTCATCA+AGG 0.560611 7_3:-60880439 Msa1114180:CDS
TCTTTGCAAAGGAAATTACA+TGG 0.562066 7_3:+60884716 None:intergenic
AGGAAGAAATAAACGGTGGA+AGG 0.562381 7_3:-60882399 Msa1114180:CDS
AGTTTCCGGTTTGCGACACT+AGG 0.563011 7_3:-60882273 Msa1114180:CDS
ATCGCGATCTTCTGCAACAG+TGG 0.563189 7_3:-60881411 Msa1114180:CDS
AAGCTGGAGCCATCTGAAGA+AGG 0.567497 7_3:-60882770 Msa1114180:CDS
GATAACAACTGATATGGTAG+AGG 0.567732 7_3:-60884328 Msa1114180:CDS
CAAAGCAAGTTGGTAATGCA+AGG 0.568641 7_3:-60883434 Msa1114180:CDS
CTTTAAGGATCGTGCTGTAG+CGG 0.569955 7_3:-60880730 Msa1114180:CDS
TCTCTTCATGGTCATCGCCA+TGG 0.570219 7_3:-60883540 Msa1114180:CDS
TGATGTGCCATATGGAGTGC+AGG 0.577439 7_3:-60882143 Msa1114180:CDS
GTTTGTAAAGGCATTAGAGA+AGG 0.579655 7_3:-60882731 Msa1114180:CDS
TTGCGACACTAGGATATTGG+AGG 0.581788 7_3:-60882263 Msa1114180:CDS
TCTAGCCATCAAGAATACAT+AGG 0.583141 7_3:-60884447 Msa1114180:CDS
GGTAGTTCTCATGCAAAGGA+TGG 0.584182 7_3:-60884279 Msa1114180:CDS
TCCTAAAGAAGTGCCGAAGG+TGG 0.585607 7_3:-60882806 Msa1114180:CDS
TCCTAAAGAAGCACAGAAGA+CGG 0.585847 7_3:-60881744 Msa1114180:CDS
ATTCCCATCACTGCCATCAG+TGG 0.585925 7_3:+60883788 None:intergenic
ATCACTTTATGATCATAGTG+TGG 0.588507 7_3:+60884348 None:intergenic
GGCATATCTTGAATAACCAC+AGG 0.588778 7_3:+60880753 None:intergenic
GCCACACTTGTAGTACTGCT+AGG 0.588822 7_3:+60883207 None:intergenic
GAAGCATCAAGTGATTGACT+TGG 0.589095 7_3:+60881374 None:intergenic
CCCGGCTAGGAAGAGAAAAG+TGG 0.589984 7_3:-60880247 Msa1114180:CDS
GAGGTACTCTTAGAAAAGAG+TGG 0.590631 7_3:-60882871 Msa1114180:CDS
CTTGATAGTGGAAGAGCAAG+TGG 0.591085 7_3:+60883656 None:intergenic
CTATATTCTGAATCCACTGA+TGG 0.591792 7_3:-60883801 Msa1114180:CDS
TTTCCAAATTAACCCCGGCT+AGG 0.593973 7_3:-60880260 Msa1114180:CDS
AAATACCATTGCTCAAGTCA+AGG 0.596469 7_3:-60884653 Msa1114180:five_prime_UTR
TCTTGATGGCTTCAATCTGT+CGG 0.596612 7_3:+60880691 None:intergenic
TTCCAAGACATCAACTGATG+TGG 0.597226 7_3:-60880844 Msa1114180:CDS
AAAGATTGTCCAGCAGAGGA+AGG 0.599326 7_3:-60884374 Msa1114180:CDS
CTTCAAAGATTGTCCAGCAG+AGG 0.599644 7_3:-60884378 Msa1114180:CDS
TATGGCAGATTACACAAAAG+AGG 0.600375 7_3:-60883887 Msa1114180:intron
ACTGGAGGAATTTACAGTGA+AGG 0.600933 7_3:-60880597 Msa1114180:CDS
GAAGTGGCTGTGTGTCTGGA+AGG 0.602919 7_3:+60880643 None:intergenic
GATGGTCATTCAAGATCTAG+AGG 0.603093 7_3:-60882907 Msa1114180:CDS
TTGAATGACCATCAGAGGAA+AGG 0.603934 7_3:+60882917 None:intergenic
GATGGCAGATCAAAGCAAGT+TGG 0.604155 7_3:-60883444 Msa1114180:CDS
AGATCTTGAATGACCATCAG+AGG 0.604665 7_3:+60882912 None:intergenic
GACACAAAGCGCTTCAACGG+AGG 0.605276 7_3:+60883510 None:intergenic
CAATTACAGTGAAACAGACT+CGG 0.605562 7_3:-60881957 Msa1114180:CDS
TCACATTGACCTCCCTCAAG+AGG 0.606739 7_3:-60883616 Msa1114180:CDS
GGCATCACCCAATTACATGA+AGG 0.607148 7_3:-60884307 Msa1114180:CDS
CACATTGACCTCCCTCAAGA+GGG 0.608923 7_3:-60883615 Msa1114180:CDS
GAAACTGTCCACAGTGCAGA+TGG 0.612121 7_3:-60883393 Msa1114180:CDS
AATCCACTGATGGCAGTGAT+GGG 0.612724 7_3:-60883791 Msa1114180:CDS
TTACATGGAAGAGTTTAGCA+TGG 0.613552 7_3:+60884731 None:intergenic
AAAACCAAGGATGTCATTGG+TGG 0.613734 7_3:-60881140 Msa1114180:CDS
ATAATCCTTGACTTGAGCAA+TGG 0.614343 7_3:+60884648 None:intergenic
TTGAACGATCATCAGAAGAG+AGG 0.614933 7_3:+60881855 None:intergenic
ACAGATTGAAGCCATCAAGA+TGG 0.615714 7_3:-60880688 Msa1114180:CDS
GTTCACGGTGTTTAAGCACA+TGG 0.618898 7_3:-60880889 Msa1114180:CDS
ATCTCCTAAAGAAGTGCCGA+AGG 0.621678 7_3:-60882809 Msa1114180:CDS
CTCTTATGAAAATACACCTG+TGG 0.623271 7_3:-60880769 Msa1114180:CDS
ATCTGGAAATGGAATAGCCG+AGG 0.625733 7_3:-60880547 Msa1114180:CDS
GTACTCTTAGAAAAGAGTGA+AGG 0.628289 7_3:-60881806 Msa1114180:CDS
ACCGCCAAGCATCAAAAGAG+AGG 0.634130 7_3:-60882633 Msa1114180:CDS
GGAAGAAATAAACGGTGGAA+GGG 0.636613 7_3:-60882398 Msa1114180:CDS
GGTTGTTTCCAAATTAACCC+CGG 0.637450 7_3:-60880265 Msa1114180:CDS
CATGCAGTATTAAGTAACAC+AGG 0.637489 7_3:-60882076 Msa1114180:CDS
AACTATAAGCAGTTGTCACG+AGG 0.638294 7_3:-60881225 Msa1114180:CDS
ACAGTGCAGATGGTAACTCT+CGG 0.639368 7_3:-60883383 Msa1114180:CDS
CTGAAGAGTATTGTGCAGGA+AGG 0.640533 7_3:-60882190 Msa1114180:CDS
AACTACTTCCCTCTTGAGGG+AGG 0.642254 7_3:+60883607 None:intergenic
AGAACAATTGACAGAACTGG+AGG 0.643088 7_3:-60880612 Msa1114180:CDS
GATGATGTCGCGTTTAATGG+AGG 0.643268 7_3:-60881998 Msa1114180:CDS
ACCTAGCAGTACTACAAGTG+TGG 0.645020 7_3:-60883208 Msa1114180:CDS
TGCTTCCTCGAATCATAGCA+AGG 0.645095 7_3:-60882419 Msa1114180:CDS
TGGACCACAGACTTCTGCAA+CGG 0.654154 7_3:-60882476 Msa1114180:CDS
GAGGAGGAAGTAACAGCCGA+AGG 0.654162 7_3:-60882244 Msa1114180:CDS
AGCAAGGAAGAAATAAACGG+TGG 0.663343 7_3:-60882403 Msa1114180:CDS
GAGAATCAGCTAGAGAAACA+AGG 0.663713 7_3:-60880927 Msa1114180:CDS
TCCACCGTTGCAGAAGTCTG+TGG 0.667308 7_3:+60882472 None:intergenic
AGAAGAATCAGTATCAAAGG+AGG 0.668259 7_3:-60880517 Msa1114180:CDS
GATTAAGCTTGAAGCCTGTG+AGG 0.668710 7_3:-60883710 Msa1114180:CDS
TATAAGCAGTTGTCACGAGG+AGG 0.669364 7_3:-60881222 Msa1114180:CDS
GTGCAGGAAGGTCCTAAACA+TGG 0.672840 7_3:-60882178 Msa1114180:CDS
TAGAGGCAATGAAACAGATG+AGG 0.674024 7_3:-60882890 Msa1114180:CDS
AACAAGGCAGCACAGGACTG+TGG 0.680675 7_3:-60880911 Msa1114180:CDS
TTCAGATGCCAACATCGAAG+GGG 0.682002 7_3:-60881609 Msa1114180:CDS
TGAAGCGCTTTGTGTCGATG+AGG 0.683168 7_3:-60883503 Msa1114180:CDS
TCAACGGAGGCAGATCACCA+TGG 0.687626 7_3:+60883523 None:intergenic
GTGGATGATGGAGTGTCATG+AGG 0.693072 7_3:+60883318 None:intergenic
AACAACAGACATCAAAGACG+TGG 0.693268 7_3:-60881006 Msa1114180:CDS
GTACTCTTAGAAAAGAGTGG+AGG 0.707522 7_3:-60882868 Msa1114180:CDS
CTTTGCATGAGAACTACCAG+TGG 0.712891 7_3:+60884284 None:intergenic
TGTCTTAGCAGATAAAACTG+AGG 0.721934 7_3:+60881352 None:intergenic
AGTGTCGCATTCATTAACTG+TGG 0.722962 7_3:+60883299 None:intergenic
GAGAGTTACCATCTGCACTG+TGG 0.732431 7_3:+60883385 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAACTAATTTATTACACTA+AGG + chr7_3:60880363-60880382 None:intergenic 15.0%
!! AATCACATATATAAAATTCA+AGG + chr7_3:60880714-60880733 None:intergenic 15.0%
!! ATCAGAAATATATAAAAAAG+TGG - chr7_3:60881773-60881792 Msa1114180:CDS 15.0%
!! GATTATCATTATTTATCATC+AGG - chr7_3:60880306-60880325 Msa1114180:CDS 20.0%
!! ATCAGAGATATATAAAAAAG+TGG - chr7_3:60882823-60882842 Msa1114180:CDS 20.0%
!!! TTGTTTTTTTGTCTTTGCAA+AGG + chr7_3:60880235-60880254 None:intergenic 25.0%
!! ATTTTCCTATGTATTCTTGA+TGG + chr7_3:60880498-60880517 None:intergenic 25.0%
! TCAAGAATACATAGGAAAAT+TGG - chr7_3:60880498-60880517 Msa1114180:CDS 25.0%
! TAAAGTGATAACAACTGATA+TGG - chr7_3:60880603-60880622 Msa1114180:CDS 25.0%
! ATGTACTAAATTGCATATCA+CGG - chr7_3:60880806-60880825 Msa1114180:CDS 25.0%
! TCAAATGTGATAGTTATTGT+GGG - chr7_3:60880997-60881016 Msa1114180:CDS 25.0%
! TACAGGAAAATGTGAAAATA+AGG - chr7_3:60881828-60881847 Msa1114180:CDS 25.0%
! AAAAGCTAATCATGTTGAAA+AGG - chr7_3:60883246-60883265 Msa1114180:CDS 25.0%
! CATGTTGAAAAGGTTTATAA+AGG - chr7_3:60883256-60883275 Msa1114180:CDS 25.0%
!!! GTTTATAAAGGCATTAGATA+AGG - chr7_3:60883268-60883287 Msa1114180:CDS 25.0%
! ATTCTCAAATGATAGTACTA+TGG - chr7_3:60883625-60883644 Msa1114180:CDS 25.0%
! AGATTTGAATACAAAAACCA+AGG - chr7_3:60883784-60883803 Msa1114180:CDS 25.0%
!! ATTCCATCTTTTGTTCTTTT+TGG + chr7_3:60884372-60884391 None:intergenic 25.0%
! AAAAGAAGAATCAGTATCAA+AGG - chr7_3:60884417-60884436 Msa1114180:CDS 25.0%
! TTAAAAAAGTGGTACTTCTT+AGG - chr7_3:60884485-60884504 Msa1114180:CDS 25.0%
!!! AACTTTTTCATCTTCTGAAT+CGG + chr7_3:60884581-60884600 None:intergenic 25.0%
! AAGATGAAAAAGTTCAATTG+AGG - chr7_3:60884587-60884606 Msa1114180:intron 25.0%
TCTTTGCAAAGGAAATTACA+TGG + chr7_3:60880224-60880243 None:intergenic 30.0%
!! TTGTTTTTCTTCACTTGATG+TGG + chr7_3:60880266-60880285 None:intergenic 30.0%
! CACTTTCTTCATTTTCTTCT+TGG + chr7_3:60880527-60880546 None:intergenic 30.0%
ATCACTTTATGATCATAGTG+TGG + chr7_3:60880592-60880611 None:intergenic 30.0%
TGTACTAAATTGCATATCAC+GGG - chr7_3:60880807-60880826 Msa1114180:CDS 30.0%
TGGATTTGAGTAGTTTAAGT+TGG - chr7_3:60880915-60880934 Msa1114180:CDS 30.0%
!! TTTGAGTAGTTTAAGTTGGT+AGG - chr7_3:60880919-60880938 Msa1114180:CDS 30.0%
GTCAAATGTGATAGTTATTG+TGG - chr7_3:60880996-60881015 Msa1114180:CDS 30.0%
AGTAATAATGTTGTTGCCTA+TGG - chr7_3:60881032-60881051 Msa1114180:CDS 30.0%
!! AATCAAGCTTTTAACTGTCA+AGG - chr7_3:60881093-60881112 Msa1114180:CDS 30.0%
!! ATCAAGCTTTTAACTGTCAA+GGG - chr7_3:60881094-60881113 Msa1114180:CDS 30.0%
!! TATAGCTGCTTTGTTGATTT+AGG + chr7_3:60881121-60881140 None:intergenic 30.0%
CATGCAGTATTAAGTAATAC+AGG - chr7_3:60881811-60881830 Msa1114180:CDS 30.0%
TAGTGAAACAGAATCAGATA+TGG - chr7_3:60881924-60881943 Msa1114180:CDS 30.0%
AAAGAAGAATATAATCGAGC+TGG - chr7_3:60881954-60881973 Msa1114180:CDS 30.0%
AAAAGAGAGGAAAAAATCTG+AGG - chr7_3:60882317-60882336 Msa1114180:CDS 30.0%
CATAGCAAGGAAGAAATAAA+CGG - chr7_3:60882531-60882550 Msa1114180:CDS 30.0%
AGAAAGGAATGACAAGAATA+TGG - chr7_3:60882581-60882600 Msa1114180:CDS 30.0%
!! AAATGATGAAAGTGCTAATG+TGG - chr7_3:60882617-60882636 Msa1114180:CDS 30.0%
!!! ACATGATTAGCTTTTTCAGA+TGG + chr7_3:60883241-60883260 None:intergenic 30.0%
ATCGGAAGAGAGAAAAAAAT+CGG - chr7_3:60883376-60883395 Msa1114180:CDS 30.0%
!!! TAGAAGCTTTTGAAACACTT+CGG - chr7_3:60883480-60883499 Msa1114180:CDS 30.0%
!! ATAGTTTCTACTGGCTTAAT+AGG + chr7_3:60883698-60883717 None:intergenic 30.0%
ACTAAAAGCTTAATCCTGAA+TGG - chr7_3:60883842-60883861 Msa1114180:CDS 30.0%
AAGATCACTGAGATCTAATT+TGG - chr7_3:60883871-60883890 Msa1114180:CDS 30.0%
TATTCAAGATATGCCCTTTA+AGG - chr7_3:60884192-60884211 Msa1114180:intron 30.0%
GAACCAAAAAGAACAAAAGA+TGG - chr7_3:60884366-60884385 Msa1114180:CDS 30.0%
AAAGAACAAAAGATGGAATC+TGG - chr7_3:60884373-60884392 Msa1114180:CDS 30.0%
TTGGAGCAATCTTAAAAAAG+TGG - chr7_3:60884474-60884493 Msa1114180:CDS 30.0%
!!! ACTTTTTCATCTTCTGAATC+GGG + chr7_3:60884580-60884599 None:intergenic 30.0%
TTACATGGAAGAGTTTAGCA+TGG + chr7_3:60880209-60880228 None:intergenic 35.0%
AAATACCATTGCTCAAGTCA+AGG - chr7_3:60880284-60880303 Msa1114180:CDS 35.0%
! ATAATCCTTGACTTGAGCAA+TGG + chr7_3:60880292-60880311 None:intergenic 35.0%
AAAGACTGAGATTGAATCTG+AGG - chr7_3:60880441-60880460 Msa1114180:CDS 35.0%
TCTAGCCATCAAGAATACAT+AGG - chr7_3:60880490-60880509 Msa1114180:CDS 35.0%
GATAACAACTGATATGGTAG+AGG - chr7_3:60880609-60880628 Msa1114180:CDS 35.0%
TTTGACTATGTAGTCAATCG+CGG - chr7_3:60880733-60880752 Msa1114180:CDS 35.0%
TAGCTACTGTTTGACAACAT+TGG - chr7_3:60880865-60880884 Msa1114180:CDS 35.0%
TAGCTACTGTTTGACAACAT+TGG - chr7_3:60880865-60880884 Msa1114180:CDS 35.0%
!! AGTAGTTTAAGTTGGTAGGA+AGG - chr7_3:60880923-60880942 Msa1114180:CDS 35.0%
ATGTGATAGTTATTGTGGGA+TGG - chr7_3:60881001-60881020 Msa1114180:CDS 35.0%
! TCTTTTGTGTAATCTGCCAT+AGG + chr7_3:60881051-60881070 None:intergenic 35.0%
TATGGCAGATTACACAAAAG+AGG - chr7_3:60881050-60881069 Msa1114180:CDS 35.0%
CTATATTCTGAATCCACTGA+TGG - chr7_3:60881136-60881155 Msa1114180:CDS 35.0%
TCTTCTAGTCATGACTCTTT+GGG + chr7_3:60881209-60881228 None:intergenic 35.0%
ATCTTCTAGTCATGACTCTT+TGG + chr7_3:60881210-60881229 None:intergenic 35.0%
AAAATGGGAATCCTTGATAG+TGG + chr7_3:60881296-60881315 None:intergenic 35.0%
GTCAATGTGATCAGGAAAAT+GGG + chr7_3:60881311-60881330 None:intergenic 35.0%
CATTCATTAACTGTGGATGA+TGG + chr7_3:60881634-60881653 None:intergenic 35.0%
TTCAACCAAAGACAAGCATA+TGG - chr7_3:60881660-60881679 Msa1114180:CDS 35.0%
! TCTTTTTCCTTTTCGACAAG+AGG + chr7_3:60881856-60881875 None:intergenic 35.0%
CTTGTCGAAAAGGAAAAAGA+AGG - chr7_3:60881856-60881875 Msa1114180:CDS 35.0%
GTGGAGGTAAAATTGAAGAA+AGG - chr7_3:60882085-60882104 Msa1114180:CDS 35.0%
AGAAGGTAATCCTCTTGAAA+AGG - chr7_3:60882184-60882203 Msa1114180:CDS 35.0%
!! CCTTTACAAACCTTTTCAAG+AGG + chr7_3:60882197-60882216 None:intergenic 35.0%
CCTCTTGAAAAGGTTTGTAA+AGG - chr7_3:60882194-60882213 Msa1114180:CDS 35.0%
!! GTTTGTAAAGGCATTAGAGA+AGG - chr7_3:60882206-60882225 Msa1114180:CDS 35.0%
! TTTTCCTCTCTTTTGATGCT+TGG + chr7_3:60882311-60882330 None:intergenic 35.0%
GCTTGATTATGCACTTCAAA+AGG - chr7_3:60882347-60882366 Msa1114180:CDS 35.0%
! GAAGCATCAAGTGATTGAAT+CGG + chr7_3:60882504-60882523 None:intergenic 35.0%
AACAGAAGTAGTCAAGTTTC+CGG - chr7_3:60882650-60882669 Msa1114180:CDS 35.0%
TTCAGCTGCACTTTATAATC+TGG + chr7_3:60882732-60882751 None:intergenic 35.0%
CATGCAGTATTAAGTAACAC+AGG - chr7_3:60882861-60882880 Msa1114180:CDS 35.0%
GATAATAAGCTTCCCTTTGT+TGG - chr7_3:60882891-60882910 Msa1114180:CDS 35.0%
TCTTTGTCCTTACCAACAAA+GGG + chr7_3:60882906-60882925 None:intergenic 35.0%
TTCTTTGTCCTTACCAACAA+AGG + chr7_3:60882907-60882926 None:intergenic 35.0%
! TTTGTTGGTAAGGACAAAGA+AGG - chr7_3:60882906-60882925 Msa1114180:CDS 35.0%
CAATTACAGTGAAACAGACT+CGG - chr7_3:60882980-60882999 Msa1114180:CDS 35.0%
CGTTCAAAATCTAGAAGCTA+CGG - chr7_3:60883098-60883117 Msa1114180:CDS 35.0%
GTACTCTTAGAAAAGAGTGA+AGG - chr7_3:60883131-60883150 Msa1114180:CDS 35.0%
! TTTTCTTAACCGCCAAACAT+CGG - chr7_3:60883358-60883377 Msa1114180:CDS 35.0%
! TTTTTCTCTCTTCCGATGTT+TGG + chr7_3:60883373-60883392 None:intergenic 35.0%
! CCATTTTCAGCATCTTGAAT+TGG + chr7_3:60883506-60883525 None:intergenic 35.0%
CCAATTCAAGATGCTGAAAA+TGG - chr7_3:60883503-60883522 Msa1114180:CDS 35.0%
TGTCTTAGCAGATAAAACTG+AGG + chr7_3:60883588-60883607 None:intergenic 35.0%
TTATCTGCTAAGACATTGCT+TGG - chr7_3:60883593-60883612 Msa1114180:CDS 35.0%
TTAATAGGCTTGCAAAGTTC+AGG + chr7_3:60883683-60883702 None:intergenic 35.0%
CAACTGCTTATAGTTTCTAC+TGG + chr7_3:60883707-60883726 None:intergenic 35.0%
AACTTCATCAATCGTTCGTT+TGG + chr7_3:60883747-60883766 None:intergenic 35.0%
ACAAAAACCAAGGATGTCAT+TGG - chr7_3:60883794-60883813 Msa1114180:CDS 35.0%
GGTTCATCTAATAGGTTTGA+AGG + chr7_3:60883911-60883930 None:intergenic 35.0%
!! CTGTTGTTGGTTCATCTAAT+AGG + chr7_3:60883919-60883938 None:intergenic 35.0%
CGTGGTTGAAAAATATCAAC+TGG - chr7_3:60883949-60883968 Msa1114180:intron 35.0%
! TTGTTTCTCTAGCTGATTCT+CGG + chr7_3:60884011-60884030 None:intergenic 35.0%
CTCTTATGAAAATACACCTG+TGG - chr7_3:60884168-60884187 Msa1114180:intron 35.0%
AACAGAACAATTGACAGAAC+TGG - chr7_3:60884322-60884341 Msa1114180:CDS 35.0%
CAAAAGATGGAATCTGGAAA+TGG - chr7_3:60884379-60884398 Msa1114180:CDS 35.0%
! TGATTCTTCTTTTCGTTCCT+CGG + chr7_3:60884410-60884429 None:intergenic 35.0%
AGAAGAATCAGTATCAAAGG+AGG - chr7_3:60884420-60884439 Msa1114180:CDS 35.0%
!! TTTCTAGACAGTTTCTGGTT+CGG + chr7_3:60884454-60884473 None:intergenic 35.0%
ACCAGAAACTGTCTAGAAAT+TGG - chr7_3:60884455-60884474 Msa1114180:CDS 35.0%
! TCCAATTTCTAGACAGTTTC+TGG + chr7_3:60884459-60884478 None:intergenic 35.0%
ACTTCTTAGGAGATTCATCA+AGG - chr7_3:60884498-60884517 Msa1114180:CDS 35.0%
!! TCAAGGCATTGGAAAAAGTA+AGG - chr7_3:60884515-60884534 Msa1114180:exon 35.0%
! GGTTCTAATGGTAGATATCT+AGG + chr7_3:60884559-60884578 None:intergenic 35.0%
! TCAATTGAGGCATCAAGATA+TGG - chr7_3:60884600-60884619 Msa1114180:intron 35.0%
CAAGATATGGCAGAAAGAAA+AGG - chr7_3:60884613-60884632 Msa1114180:intron 35.0%
! AAAGAAAAGGCACAGAAGAA+TGG - chr7_3:60884626-60884645 Msa1114180:intron 35.0%
CTTCACTTGATGTGGAGAAT+TGG + chr7_3:60880258-60880277 None:intergenic 40.0%
TGAGGAAGTGATTGAATCAG+AGG - chr7_3:60880459-60880478 Msa1114180:CDS 40.0%
! TCATGCAAAGGATGGTTTTC+AGG - chr7_3:60880666-60880685 Msa1114180:CDS 40.0%
ACAGTAGCTATATAGCGTAG+CGG + chr7_3:60880855-60880874 None:intergenic 40.0%
! ATGGCAGTGATGGGAATAAT+AGG - chr7_3:60881155-60881174 Msa1114180:CDS 40.0%
TTTCTTGATGAGATCCTCAC+AGG + chr7_3:60881244-60881263 None:intergenic 40.0%
!! CAAGTGGCTTTATGCAAACT+TGG + chr7_3:60881268-60881287 None:intergenic 40.0%
GGTCAATGTGATCAGGAAAA+TGG + chr7_3:60881312-60881331 None:intergenic 40.0%
!! TCAAGGAGTATCAGCTGTTA+AGG - chr7_3:60881354-60881373 Msa1114180:CDS 40.0%
TATGCTTACTGCTCTCTTCA+TGG - chr7_3:60881385-60881404 Msa1114180:CDS 40.0%
CAAAAGTCCACGAAAAAGGA+TGG - chr7_3:60881475-60881494 Msa1114180:CDS 40.0%
!! CAAAGCAAGTTGGTAATGCA+AGG - chr7_3:60881503-60881522 Msa1114180:CDS 40.0%
TCGGCAGAATGTGAAAAATG+TGG - chr7_3:60881573-60881592 Msa1114180:CDS 40.0%
AGTGTCGCATTCATTAACTG+TGG + chr7_3:60881641-60881660 None:intergenic 40.0%
CTTGTAGTACTGCTAGGTTT+AGG + chr7_3:60881727-60881746 None:intergenic 40.0%
AGTACTACAAGTGTGGCATA+TGG - chr7_3:60881736-60881755 Msa1114180:CDS 40.0%
TAAGGTTCCTCTTGTCGAAA+AGG - chr7_3:60881846-60881865 Msa1114180:CDS 40.0%
GTCGAAAAGGAAAAAGAAGG+TGG - chr7_3:60881859-60881878 Msa1114180:CDS 40.0%
AAAGGAAAAAGAAGGTGGAG+AGG - chr7_3:60881864-60881883 Msa1114180:CDS 40.0%
AGGAAAGGTCTTCAACTTCA+GGG + chr7_3:60882008-60882027 None:intergenic 40.0%
TTGAATGACCATCAGAGGAA+AGG + chr7_3:60882023-60882042 None:intergenic 40.0%
AGATCTTGAATGACCATCAG+AGG + chr7_3:60882028-60882047 None:intergenic 40.0%
GATGGTCATTCAAGATCTAG+AGG - chr7_3:60882030-60882049 Msa1114180:CDS 40.0%
TAGAGGCAATGAAACAGATG+AGG - chr7_3:60882047-60882066 Msa1114180:CDS 40.0%
! GAGGTACTCTTAGAAAAGAG+TGG - chr7_3:60882066-60882085 Msa1114180:CDS 40.0%
GTACTCTTAGAAAAGAGTGG+AGG - chr7_3:60882069-60882088 Msa1114180:CDS 40.0%
AGGAGATTCTGTGAAAGTTG+TGG + chr7_3:60882115-60882134 None:intergenic 40.0%
!! TTTTGTTTGCTCTCCACCTT+CGG + chr7_3:60882147-60882166 None:intergenic 40.0%
TGGAGAGCAAACAAAAAAGC+TGG - chr7_3:60882151-60882170 Msa1114180:CDS 40.0%
AGAGGATTACCTTCTTCAGA+TGG + chr7_3:60882179-60882198 None:intergenic 40.0%
AACTTTCTCTGCTTCGAAGT+TGG + chr7_3:60882277-60882296 None:intergenic 40.0%
AGAGGAAAAAATCTGAGGAG+TGG - chr7_3:60882322-60882341 Msa1114180:CDS 40.0%
! CCATTTTCAGCATCTTGAAG+TGG + chr7_3:60882444-60882463 None:intergenic 40.0%
CCACTTCAAGATGCTGAAAA+TGG - chr7_3:60882441-60882460 Msa1114180:CDS 40.0%
! TTCTTCCTTGCTATGATTCG+AGG + chr7_3:60882526-60882545 None:intergenic 40.0%
AGCAAGGAAGAAATAAACGG+TGG - chr7_3:60882534-60882553 Msa1114180:CDS 40.0%
AGGAAGAAATAAACGGTGGA+AGG - chr7_3:60882538-60882557 Msa1114180:CDS 40.0%
GGAAGAAATAAACGGTGGAA+GGG - chr7_3:60882539-60882558 Msa1114180:CDS 40.0%
TTGAGGTAACTGAGAGAGAA+AGG - chr7_3:60882565-60882584 Msa1114180:CDS 40.0%
AATATCCTAGTGTCGCAAAC+CGG + chr7_3:60882672-60882691 None:intergenic 40.0%
GTAGTACTCGTACCATGTTT+AGG + chr7_3:60882774-60882793 None:intergenic 40.0%
AGTACTACTGATGTGCCATA+TGG - chr7_3:60882786-60882805 Msa1114180:CDS 40.0%
TAAGCTTCCCTTTGTTGGTA+AGG - chr7_3:60882896-60882915 Msa1114180:CDS 40.0%
CAAGATGATGTCGCGTTTAA+TGG - chr7_3:60882936-60882955 Msa1114180:CDS 40.0%
TTGAACGATCATCAGAAGAG+AGG + chr7_3:60883085-60883104 None:intergenic 40.0%
AGGAGTTTCTGTGAAACTTG+TGG + chr7_3:60883177-60883196 None:intergenic 40.0%
! TCCTAAAGAAGCACAGAAGA+CGG - chr7_3:60883193-60883212 Msa1114180:CDS 40.0%
! GTCAATTCTCTTGGTCTTCT+TGG + chr7_3:60883308-60883327 None:intergenic 40.0%
! GCATCTGAAGTCAATTCTCT+TGG + chr7_3:60883317-60883336 None:intergenic 40.0%
!! AACTTTTTCCCCTTCGATGT+TGG + chr7_3:60883339-60883358 None:intergenic 40.0%
GGAAGAGAGAAAAAAATCGG+AGG - chr7_3:60883379-60883398 Msa1114180:CDS 40.0%
AGAGAAAAAAATCGGAGGAG+TGG - chr7_3:60883384-60883403 Msa1114180:CDS 40.0%
GCTTGACTATGCACTTCAAA+AGG - chr7_3:60883409-60883428 Msa1114180:CDS 40.0%
! GAAGCATCAAGTGATTGACT+TGG + chr7_3:60883566-60883585 None:intergenic 40.0%
AACTATAAGCAGTTGTCACG+AGG - chr7_3:60883712-60883731 Msa1114180:CDS 40.0%
TCATCAATCGTTCGTTTGGT+TGG + chr7_3:60883743-60883762 None:intergenic 40.0%
TGATGAAGTTCCAGAAGATC+TGG - chr7_3:60883757-60883776 Msa1114180:CDS 40.0%
AAATCTGATGCCAGATCTTC+TGG + chr7_3:60883770-60883789 None:intergenic 40.0%
AAAACCAAGGATGTCATTGG+TGG - chr7_3:60883797-60883816 Msa1114180:CDS 40.0%
GTGATCTTACAAGACCATTC+AGG + chr7_3:60883859-60883878 None:intergenic 40.0%
!! AATAGGTTTGAAGGAGCATC+TGG + chr7_3:60883902-60883921 None:intergenic 40.0%
ACGTCTTTGATGTCTGTTGT+TGG + chr7_3:60883932-60883951 None:intergenic 40.0%
AACAACAGACATCAAAGACG+TGG - chr7_3:60883931-60883950 Msa1114180:intron 40.0%
GATTCTACAACAGCACTTGT+AGG + chr7_3:60883989-60884008 None:intergenic 40.0%
GAGAATCAGCTAGAGAAACA+AGG - chr7_3:60884010-60884029 Msa1114180:intron 40.0%
TTCCAAGACATCAACTGATG+TGG - chr7_3:60884093-60884112 Msa1114180:intron 40.0%
! TTCCACATCAGTTGATGTCT+TGG + chr7_3:60884098-60884117 None:intergenic 40.0%
GGCATATCTTGAATAACCAC+AGG + chr7_3:60884187-60884206 None:intergenic 40.0%
! TCTTGATGGCTTCAATCTGT+CGG + chr7_3:60884249-60884268 None:intergenic 40.0%
ACAGATTGAAGCCATCAAGA+TGG - chr7_3:60884249-60884268 Msa1114180:intron 40.0%
ATTGTTCTGTTGTCAGGAAG+TGG + chr7_3:60884313-60884332 None:intergenic 40.0%
CTGTCAATTGTTCTGTTGTC+AGG + chr7_3:60884319-60884338 None:intergenic 40.0%
AGAACAATTGACAGAACTGG+AGG - chr7_3:60884325-60884344 Msa1114180:CDS 40.0%
ACTGGAGGAATTTACAGTGA+AGG - chr7_3:60884340-60884359 Msa1114180:CDS 40.0%
TAGGAGATTCATCAAGGCAT+TGG - chr7_3:60884504-60884523 Msa1114180:CDS 40.0%
GTAGATATCTAGGCTCTCTT+GGG + chr7_3:60884549-60884568 None:intergenic 40.0%
! TCTTCTGAATCGGGTTCTAA+TGG + chr7_3:60884571-60884590 None:intergenic 40.0%
GCTTGATTATGCACTTAGAC+AGG - chr7_3:60884651-60884670 Msa1114180:five_prime_UTR 40.0%
! GGTTGTTTCCAAATTAACCC+CGG - chr7_3:60884672-60884691 Msa1114180:five_prime_UTR 40.0%
CTTCAAAGATTGTCCAGCAG+AGG - chr7_3:60880559-60880578 Msa1114180:CDS 45.0%
AAAGATTGTCCAGCAGAGGA+AGG - chr7_3:60880563-60880582 Msa1114180:CDS 45.0%
GGCATCACCCAATTACATGA+AGG - chr7_3:60880630-60880649 Msa1114180:CDS 45.0%
CCAGTGGCCTTCATGTAATT+GGG + chr7_3:60880640-60880659 None:intergenic 45.0%
ACCAGTGGCCTTCATGTAAT+TGG + chr7_3:60880641-60880660 None:intergenic 45.0%
CTTTGCATGAGAACTACCAG+TGG + chr7_3:60880656-60880675 None:intergenic 45.0%
CACTGGTAGTTCTCATGCAA+AGG - chr7_3:60880654-60880673 Msa1114180:CDS 45.0%
GGTAGTTCTCATGCAAAGGA+TGG - chr7_3:60880658-60880677 Msa1114180:CDS 45.0%
AATCCACTGATGGCAGTGAT+GGG - chr7_3:60881146-60881165 Msa1114180:CDS 45.0%
AGGAGTAGTACAAGTGATGC+TGG - chr7_3:60881175-60881194 Msa1114180:CDS 45.0%
GATTAAGCTTGAAGCCTGTG+AGG - chr7_3:60881227-60881246 Msa1114180:CDS 45.0%
!! CTTGATAGTGGAAGAGCAAG+TGG + chr7_3:60881284-60881303 None:intergenic 45.0%
CACTTGCTCTTCCACTATCA+AGG - chr7_3:60881282-60881301 Msa1114180:CDS 45.0%
GAGAACTACTTCCCTCTTGA+GGG + chr7_3:60881336-60881355 None:intergenic 45.0%
TGAGAACTACTTCCCTCTTG+AGG + chr7_3:60881337-60881356 None:intergenic 45.0%
CAAGAGGGAAGTAGTTCTCA+AGG - chr7_3:60881337-60881356 Msa1114180:CDS 45.0%
! ATCGACACAAAGCGCTTCAA+CGG + chr7_3:60881433-60881452 None:intergenic 45.0%
GGCACAAAAGTCCACGAAAA+AGG - chr7_3:60881471-60881490 Msa1114180:CDS 45.0%
!! TGATCTGCCATCCTTTTTCG+TGG + chr7_3:60881485-60881504 None:intergenic 45.0%
GATGGCAGATCAAAGCAAGT+TGG - chr7_3:60881493-60881512 Msa1114180:CDS 45.0%
ATCTGCACTGTGGACAGTTT+CGG + chr7_3:60881545-60881564 None:intergenic 45.0%
ACAGTGCAGATGGTAACTCT+CGG - chr7_3:60881554-60881573 Msa1114180:CDS 45.0%
! GGAGTGTCATGAGGCTTAAA+AGG + chr7_3:60881613-60881632 None:intergenic 45.0%
TGGCACCATATGCTTGTCTT+TGG + chr7_3:60881668-60881687 None:intergenic 45.0%
TTCTGCAGCACTTCATAGTC+TGG + chr7_3:60881688-60881707 None:intergenic 45.0%
ACCTAGCAGTACTACAAGTG+TGG - chr7_3:60881729-60881748 Msa1114180:CDS 45.0%
GGTGGAGAGGAAGATAATGA+AGG - chr7_3:60881877-60881896 Msa1114180:CDS 45.0%
GAGGAAAGGTCTTCAACTTC+AGG + chr7_3:60882009-60882028 None:intergenic 45.0%
GTTGAAGACCTTTCCTCTGA+TGG - chr7_3:60882012-60882031 Msa1114180:CDS 45.0%
!! ATCTCCTAAAGAAGTGCCGA+AGG - chr7_3:60882128-60882147 Msa1114180:CDS 45.0%
GCATCTGAAGGCAATTGTCT+TGG + chr7_3:60882255-60882274 None:intergenic 45.0%
! TCCTCTCTTTTGATGCTTGG+CGG + chr7_3:60882308-60882327 None:intergenic 45.0%
GTCACTCTTTGTCTTTGAGC+AGG + chr7_3:60882390-60882409 None:intergenic 45.0%
TGCTTCCTCGAATCATAGCA+AGG - chr7_3:60882518-60882537 Msa1114180:CDS 45.0%
! AAACGGTGGAAGGGATTTTG+AGG - chr7_3:60882548-60882567 Msa1114180:CDS 45.0%
GGTTTGCGACACTAGGATAT+TGG - chr7_3:60882671-60882690 Msa1114180:CDS 45.0%
TTGCGACACTAGGATATTGG+AGG - chr7_3:60882674-60882693 Msa1114180:CDS 45.0%
AACAGCCGAAGGCGAAAATA+TGG - chr7_3:60882704-60882723 Msa1114180:CDS 45.0%
! TGGCTCCATATTTTCGCCTT+CGG + chr7_3:60882712-60882731 None:intergenic 45.0%
!! CTGAAGAGTATTGTGCAGGA+AGG - chr7_3:60882747-60882766 Msa1114180:CDS 45.0%
TCTCTTTCCTGCACTCCATA+TGG + chr7_3:60881754-60881773 None:intergenic 45.0%
GATGATGTCGCGTTTAATGG+AGG - chr7_3:60882939-60882958 Msa1114180:CDS 45.0%
CAGTGAAACAGACTCGGATA+TGG - chr7_3:60882986-60883005 Msa1114180:CDS 45.0%
TCCGTCTTCTGTGCTTCTTT+AGG + chr7_3:60883197-60883216 None:intergenic 45.0%
CGGAGAACAAACCAAAAAGC+TGG - chr7_3:60883213-60883232 Msa1114180:CDS 45.0%
! TTCAGATGGCTCCAGCTTTT+TGG + chr7_3:60882165-60882184 None:intergenic 45.0%
ACTTCAGATGCCAACATCGA+AGG - chr7_3:60883326-60883345 Msa1114180:CDS 45.0%
CTTCAGATGCCAACATCGAA+GGG - chr7_3:60883327-60883346 Msa1114180:CDS 45.0%
TTCAGATGCCAACATCGAAG+GGG - chr7_3:60883328-60883347 Msa1114180:CDS 45.0%
TTCTCTCTTCCGATGTTTGG+CGG + chr7_3:60883370-60883389 None:intergenic 45.0%
GTCACTCTTTGTCTTTGAGC+AGG + chr7_3:60882390-60882409 None:intergenic 45.0%
TTCTGCAACAGTGGAATCTC+AGG - chr7_3:60883535-60883554 Msa1114180:CDS 45.0%
TATAAGCAGTTGTCACGAGG+AGG - chr7_3:60883715-60883734 Msa1114180:CDS 45.0%
ATGACCACCAATGACATCCT+TGG + chr7_3:60883804-60883823 None:intergenic 45.0%
! AAGGATGTCATTGGTGGTCA+TGG - chr7_3:60883803-60883822 Msa1114180:CDS 45.0%
GTTCACGGTGTTTAAGCACA+TGG - chr7_3:60884048-60884067 Msa1114180:intron 45.0%
GCTACAGCACGATCCTTAAA+GGG + chr7_3:60884208-60884227 None:intergenic 45.0%
! CTTTAAGGATCGTGCTGTAG+CGG - chr7_3:60884207-60884226 Msa1114180:intron 45.0%
TGCGTCTTCTACCATCTTGA+TGG + chr7_3:60884263-60884282 None:intergenic 45.0%
ATCTGGAAATGGAATAGCCG+AGG - chr7_3:60884390-60884409 Msa1114180:CDS 45.0%
GGTAGATATCTAGGCTCTCT+TGG + chr7_3:60884550-60884569 None:intergenic 45.0%
TTTCCAAATTAACCCCGGCT+AGG - chr7_3:60884677-60884696 Msa1114180:five_prime_UTR 45.0%
!! TCCACTTTTCTCTTCCTAGC+CGG + chr7_3:60884694-60884713 None:intergenic 45.0%
GAAGAGAAAAGTGGAGCTGT+TGG - chr7_3:60884699-60884718 Msa1114180:five_prime_UTR 45.0%
CCCAATTACATGAAGGCCAC+TGG - chr7_3:60880637-60880656 Msa1114180:CDS 50.0%
CTATGTAGTCAATCGCGGAG+AGG - chr7_3:60880738-60880757 Msa1114180:CDS 50.0%
GAATCCACTGATGGCAGTGA+TGG - chr7_3:60881145-60881164 Msa1114180:CDS 50.0%
ATTCCCATCACTGCCATCAG+TGG + chr7_3:60881152-60881171 None:intergenic 50.0%
TGAGGGAGGTCAATGTGATC+AGG + chr7_3:60881319-60881338 None:intergenic 50.0%
TCACATTGACCTCCCTCAAG+AGG - chr7_3:60881321-60881340 Msa1114180:CDS 50.0%
CACATTGACCTCCCTCAAGA+GGG - chr7_3:60881322-60881341 Msa1114180:CDS 50.0%
AACTACTTCCCTCTTGAGGG+AGG + chr7_3:60881333-60881352 None:intergenic 50.0%
TCTCTTCATGGTCATCGCCA+TGG - chr7_3:60881397-60881416 Msa1114180:CDS 50.0%
! TGAAGCGCTTTGTGTCGATG+AGG - chr7_3:60881434-60881453 Msa1114180:CDS 50.0%
GATGAGGAGACGTCAGTTGA+AGG - chr7_3:60881450-60881469 Msa1114180:CDS 50.0%
GAAACTGTCCACAGTGCAGA+TGG - chr7_3:60881544-60881563 Msa1114180:CDS 50.0%
GAGAGTTACCATCTGCACTG+TGG + chr7_3:60881555-60881574 None:intergenic 50.0%
!! GTGGATGATGGAGTGTCATG+AGG + chr7_3:60881622-60881641 None:intergenic 50.0%
GCCACACTTGTAGTACTGCT+AGG + chr7_3:60881733-60881752 None:intergenic 50.0%
AAGTGTGGCATATGGAGTGC+AGG - chr7_3:60881744-60881763 Msa1114180:CDS 50.0%
!! TCCTAAAGAAGTGCCGAAGG+TGG - chr7_3:60882131-60882150 Msa1114180:CDS 50.0%
TCCACCTTCGGCACTTCTTT+AGG + chr7_3:60882135-60882154 None:intergenic 50.0%
AAGCTGGAGCCATCTGAAGA+AGG - chr7_3:60882167-60882186 Msa1114180:CDS 50.0%
GCTTCGAAGTTGGCATCTGA+AGG + chr7_3:60882267-60882286 None:intergenic 50.0%
ACCGCCAAGCATCAAAAGAG+AGG - chr7_3:60882304-60882323 Msa1114180:CDS 50.0%
TGGACCACAGACTTCTGCAA+CGG - chr7_3:60882461-60882480 Msa1114180:CDS 50.0%
! AGTTTCCGGTTTGCGACACT+AGG - chr7_3:60882664-60882683 Msa1114180:CDS 50.0%
CGACACTAGGATATTGGAGG+AGG - chr7_3:60882677-60882696 Msa1114180:CDS 50.0%
!! GCAGCTGAAGAGTATTGTGC+AGG - chr7_3:60882743-60882762 Msa1114180:CDS 50.0%
GTGCAGGAAGGTCCTAAACA+TGG - chr7_3:60882759-60882778 Msa1114180:CDS 50.0%
TGATGTGCCATATGGAGTGC+AGG - chr7_3:60882794-60882813 Msa1114180:CDS 50.0%
GAAGAGAGGTCTTCAGCTTC+AGG + chr7_3:60883071-60883090 None:intergenic 50.0%
ATCGCGATCTTCTGCAACAG+TGG - chr7_3:60883526-60883545 Msa1114180:CDS 50.0%
GGCTTGCAAAGTTCAGGCAT+TGG + chr7_3:60883677-60883696 None:intergenic 50.0%
CTAGAGAAACAAGGCAGCAC+AGG - chr7_3:60884019-60884038 Msa1114180:intron 50.0%
CGCTACAGCACGATCCTTAA+AGG + chr7_3:60884209-60884228 None:intergenic 50.0%
CTTCCTAGCCGGGGTTAATT+TGG + chr7_3:60884683-60884702 None:intergenic 50.0%
! CACTTTTCTCTTCCTAGCCG+GGG + chr7_3:60884692-60884711 None:intergenic 50.0%
!! CCACTTTTCTCTTCCTAGCC+GGG + chr7_3:60884693-60884712 None:intergenic 50.0%
GAGAAAAGTGGAGCTGTTGG+TGG - chr7_3:60884702-60884721 Msa1114180:five_prime_UTR 50.0%
GTGTGGTTTCCTTCCTCTGC+TGG + chr7_3:60880575-60880594 None:intergenic 55.0%
TCAACGGAGGCAGATCACCA+TGG + chr7_3:60881417-60881436 None:intergenic 55.0%
! GACACAAAGCGCTTCAACGG+AGG + chr7_3:60881430-60881449 None:intergenic 55.0%
ACCACAGACTTCTGCAACGG+TGG - chr7_3:60882464-60882483 Msa1114180:CDS 55.0%
TCCACCGTTGCAGAAGTCTG+TGG + chr7_3:60882468-60882487 None:intergenic 55.0%
TTCTGCAACGGTGGAGTCTC+AGG - chr7_3:60882473-60882492 Msa1114180:CDS 55.0%
GAGGAGGAAGTAACAGCCGA+AGG - chr7_3:60882693-60882712 Msa1114180:CDS 55.0%
AACAAGGCAGCACAGGACTG+TGG - chr7_3:60884026-60884045 Msa1114180:intron 55.0%
CAGCACAGGACTGTGGTTCA+CGG - chr7_3:60884033-60884052 Msa1114180:intron 55.0%
GAAGTGGCTGTGTGTCTGGA+AGG + chr7_3:60884297-60884316 None:intergenic 55.0%
TCAGGAAGTGGCTGTGTGTC+TGG + chr7_3:60884301-60884320 None:intergenic 55.0%
CCCGGCTAGGAAGAGAAAAG+TGG - chr7_3:60884690-60884709 Msa1114180:five_prime_UTR 55.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 60880197 60884762 60880197 ID=Msa1114180;Name=Msa1114180
chr7_3 mRNA 60880197 60884762 60880197 ID=Msa1114180-mRNA-1;Parent=Msa1114180;Name=Msa1114180-mRNA-1;_AED=0.05;_eAED=0.05;_QI=141|1|0.66|1|0.5|0.33|3|0|1320
chr7_3 exon 60880197 60883901 60880197 ID=Msa1114180-mRNA-1:exon:13749;Parent=Msa1114180-mRNA-1
chr7_3 exon 60884272 60884539 60884272 ID=Msa1114180-mRNA-1:exon:13748;Parent=Msa1114180-mRNA-1
chr7_3 exon 60884632 60884762 60884632 ID=Msa1114180-mRNA-1:exon:13747;Parent=Msa1114180-mRNA-1
chr7_3 five_prime_UTR 60884632 60884762 60884632 ID=Msa1114180-mRNA-1:five_prime_utr;Parent=Msa1114180-mRNA-1
chr7_3 five_prime_UTR 60884530 60884539 60884530 ID=Msa1114180-mRNA-1:five_prime_utr;Parent=Msa1114180-mRNA-1
chr7_3 CDS 60884272 60884529 60884272 ID=Msa1114180-mRNA-1:cds;Parent=Msa1114180-mRNA-1
chr7_3 CDS 60880197 60883901 60880197 ID=Msa1114180-mRNA-1:cds;Parent=Msa1114180-mRNA-1
Gene Sequence

>Msa1114180

ATGATGAATCAAAAGACTGAGATTGAATCTGAGGAAGTGATTGAATCAGAGGAATCTGATTCTAGCCATCAAGAATACATAGGAAAATTGGAATCCAAGAAGAAAATGAAGAAAGTGAGATCAATGAAGCTTCAAAGATTGTCCAGCAGAGGAAGGAAACCACACTATGATCATAAAGTGATAACAACTGATATGGTAGAGGCATCACCCAATTACATGAAGGCCACTGGTAGTTCTCATGCAAAGGATGGTTTTCAGATTACACAAAAGAGGAAGATGAAGTCATTAAGATCAATCAAGCTTTTAACTGTCAAGGGACCTAAATCAACAAAGCAGCTATATTCTGAATCCACTGATGGCAGTGATGGGAATAATAGGAGTAGTACAAGTGATGCTGGTAACAAGTCCCAAAGAGTCATGACTAGAAGATTAAGCTTGAAGCCTGTGAGGATCTCATCAAGAAAACCAAGTTTGCATAAAGCCACTTGCTCTTCCACTATCAAGGATTCCCATTTTCCTGATCACATTGACCTCCCTCAAGAGGGAAGTAGTTCTCAAGGAGTATCAGCTGTTAAGGTTTGTACATATGCTTACTGCTCTCTTCATGGTCATCGCCATGGTGATCTGCCTCCGTTGAAGCGCTTTGTGTCGATGAGGAGACGTCAGTTGAAGGCACAAAAGTCCACGAAAAAGGATGGCAGATCAAAGCAAGTTGGTAATGCAAGGAAAGCTACTCAGAAAACCGAAACTGTCCACAGTGCAGATGGTAACTCTCGGCAGAATGTGAAAAATGTGGCGACAGAATCATCACCTTTTAAGCCTCATGACACTCCATCATCCACAGTTAATGAATGCGACACTTCAACCAAAGACAAGCATATGGTGCCAGACTATGAAGTGCTGCAGAAGAGTTCTACACAAGAGCCTAAACCTAGCAGTACTACAAGTGTGGCATATGGAGTGCAGGAAAGAGATCAGAAATATATAAAAAAGTGGCATTTGATGTATAAACATGCAGTATTAAGTAATACAGGAAAATGTGAAAATAAGGTTCCTCTTGTCGAAAAGGAAAAAGAAGGTGGAGAGGAAGATAATGAAGGAAACAACTCTTCTTGTCACAATCATAGTGAAACAGAATCAGATATGGATGATGAAAAGAAGAATATAATCGAGCTGGTGCAGAAAGCATTTGATGAGATTCTTCTCCCTGAAGTTGAAGACCTTTCCTCTGATGGTCATTCAAGATCTAGAGGCAATGAAACAGATGAGGTACTCTTAGAAAAGAGTGGAGGTAAAATTGAAGAAAGGAATACCACAACTTTCACAGAATCTCCTAAAGAAGTGCCGAAGGTGGAGAGCAAACAAAAAAGCTGGAGCCATCTGAAGAAGGTAATCCTCTTGAAAAGGTTTGTAAAGGCATTAGAGAAGGTACAAAACATCAACTCAAGAAGACCAAGACAATTGCCTTCAGATGCCAACTTCGAAGCAGAGAAAGTTCTTCTTAACCGCCAAGCATCAAAAGAGAGGAAAAAATCTGAGGAGTGGATGCTTGATTATGCACTTCAAAAGGTTATTTCTAAACTCGCACCTGCTCAAAGACAAAGAGTGACACTTTTAGTAGAAGCTTTTGAAACTATTCGTCCACTTCAAGATGCTGAAAATGGACCACAGACTTCTGCAACGGTGGAGTCTCAGGCAAATCCGATTCAATCACTTGATGCTTCCTCGAATCATAGCAAGGAAGAAATAAACGGTGGAAGGGATTTTGAGGTAACTGAGAGAGAAAGGAATGACAAGAATATGGATGCATGTAAGAAAAATGATGAAAGTGCTAATGTGGAATTAACATCAACAGAAGTAGTCAAGTTTCCGGTTTGCGACACTAGGATATTGGAGGAGGAAGTAACAGCCGAAGGCGAAAATATGGAGCCAGATTATAAAGTGCAGCTGAAGAGTATTGTGCAGGAAGGTCCTAAACATGGTACGAGTACTACTGATGTGCCATATGGAGTGCAGGAAAGAGATCAGAGATATATAAAAAAGTGGCATTTGATGTATAAGCATGCAGTATTAAGTAACACAGGAAAATGTGATAATAAGCTTCCCTTTGTTGGTAAGGACAAAGAAGGTAGAGAGCAAGATGATGTCGCGTTTAATGGAGGAAACAGCTCTTCTTTTCACAATTACAGTGAAACAGACTCGGATATGGATGATGAAAAGAAGAATGTAGTTGAGCTTGTGCAAAAAGCATTTGATGAAATTCTTCTACCTGAAGCTGAAGACCTCTCTTCTGATGATCGTTCAAAATCTAGAAGCTACGGCTCAGATGAAGTACTCTTAGAAAAGAGTGAAGGTGAGAGAGAAGAAATGAATGCCACAAGTTTCACAGAAACTCCTAAAGAAGCACAGAAGACGGAGAACAAACCAAAAAGCTGGAGCCATCTGAAAAAGCTAATCATGTTGAAAAGGTTTATAAAGGCATTAGATAAGGTAAGAAACATCAATCCAAGAAGACCAAGAGAATTGACTTCAGATGCCAACATCGAAGGGGAAAAAGTTTTTCTTAACCGCCAAACATCGGAAGAGAGAAAAAAATCGGAGGAGTGGATGCTTGACTATGCACTTCAAAAGGTTATTTCTAAACTCGCACCTGCTCAAAGACAAAGAGTGACACTTCTAATAGAAGCTTTTGAAACACTTCGGCCAATTCAAGATGCTGAAAATGGATCGCGATCTTCTGCAACAGTGGAATCTCAGGAAAATCCAAGTCAATCACTTGATGCTTCCTCAGTTTTATCTGCTAAGACATTGCTTGGAAGAGTATCATTCTCAAATGATAGTACTATGGAATTTTCTGATAAAGCTAGTGACAATCCAATGCCTGAACTTTGCAAGCCTATTAAGCCAGTAGAAACTATAAGCAGTTGTCACGAGGAGGCTCCAACCAAACGAACGATTGATGAAGTTCCAGAAGATCTGGCATCAGATTTGAATACAAAAACCAAGGATGTCATTGGTGGTCATGGTGAACAATTTTCTGTGACTAAAAGCTTAATCCTGAATGGTCTTGTAAGATCACTGAGATCTAATTTGGTTGTTCCAGATGCTCCTTCAAACCTATTAGATGAACCAACAACAGACATCAAAGACGTGGTTGAAAAATATCAACTGGAAAAATCTGAAGCTCCTACAAGTGCTGTTGTAGAATCCGAGAATCAGCTAGAGAAACAAGGCAGCACAGGACTGTGGTTCACGGTGTTTAAGCACATGGTATCAGATATGACAGAAAACAATTCCAAGACATCAACTGATGTGGAAGATGAAAAAGATTCAAAGTATGAAGATAGCACAACAAGAGAAACTTCTGTCTCTTATGAAAATACACCTGTGGTTATTCAAGATATGCCCTTTAAGGATCGTGCTGTAGCGGATGCTGAAGTTGAACTCCGACAGATTGAAGCCATCAAGATGGTAGAAGACGCAATAGATTCAATCCTTCCAGACACACAGCCACTTCCTGACAACAGAACAATTGACAGAACTGGAGGAATTTACAGTGAAGGCTTGAACCAAAAAGAACAAAAGATGGAATCTGGAAATGGAATAGCCGAGGAACGAAAAGAAGAATCAGTATCAAAGGAGGTAAACAAACCGAACCAGAAACTGTCTAGAAATTGGAGCAATCTTAAAAAAGTGGTACTTCTTAGGAGATTCATCAAGGCATTGGAAAAAGTAAGGAAATTCAACCCAAGAGAGCCTAGATATCTACCATTAGAACCCGATTCAGAAGATGAAAAAGTTCAATTGAGGCATCAAGATATGGCAGAAAGAAAAGGCACAGAAGAATGGATGCTTGATTATGCACTTAGACAGGTTGTTTCCAAATTAACCCCGGCTAGGAAGAGAAAAGTGGAGCTGTTGGTGGAAGCTTTCGAGACAGTCGTGCCAACTGTAAAACATTGA
Protein sequence

>Msa1114180

MMNQKTEIESEEVIESEESDSSHQEYIGKLESKKKMKKVRSMKLQRLSSRGRKPHYDHKVITTDMVEASPNYMKATGSSHAKDGFQITQKRKMKSLRSIKLLTVKGPKSTKQLYSESTDGSDGNNRSSTSDAGNKSQRVMTRRLSLKPVRISSRKPSLHKATCSSTIKDSHFPDHIDLPQEGSSSQGVSAVKVCTYAYCSLHGHRHGDLPPLKRFVSMRRRQLKAQKSTKKDGRSKQVGNARKATQKTETVHSADGNSRQNVKNVATESSPFKPHDTPSSTVNECDTSTKDKHMVPDYEVLQKSSTQEPKPSSTTSVAYGVQERDQKYIKKWHLMYKHAVLSNTGKCENKVPLVEKEKEGGEEDNEGNNSSCHNHSETESDMDDEKKNIIELVQKAFDEILLPEVEDLSSDGHSRSRGNETDEVLLEKSGGKIEERNTTTFTESPKEVPKVESKQKSWSHLKKVILLKRFVKALEKVQNINSRRPRQLPSDANFEAEKVLLNRQASKERKKSEEWMLDYALQKVISKLAPAQRQRVTLLVEAFETIRPLQDAENGPQTSATVESQANPIQSLDASSNHSKEEINGGRDFEVTERERNDKNMDACKKNDESANVELTSTEVVKFPVCDTRILEEEVTAEGENMEPDYKVQLKSIVQEGPKHGTSTTDVPYGVQERDQRYIKKWHLMYKHAVLSNTGKCDNKLPFVGKDKEGREQDDVAFNGGNSSSFHNYSETDSDMDDEKKNVVELVQKAFDEILLPEAEDLSSDDRSKSRSYGSDEVLLEKSEGEREEMNATSFTETPKEAQKTENKPKSWSHLKKLIMLKRFIKALDKVRNINPRRPRELTSDANIEGEKVFLNRQTSEERKKSEEWMLDYALQKVISKLAPAQRQRVTLLIEAFETLRPIQDAENGSRSSATVESQENPSQSLDASSVLSAKTLLGRVSFSNDSTMEFSDKASDNPMPELCKPIKPVETISSCHEEAPTKRTIDEVPEDLASDLNTKTKDVIGGHGEQFSVTKSLILNGLVRSLRSNLVVPDAPSNLLDEPTTDIKDVVEKYQLEKSEAPTSAVVESENQLEKQGSTGLWFTVFKHMVSDMTENNSKTSTDVEDEKDSKYEDSTTRETSVSYENTPVVIQDMPFKDRAVADAEVELRQIEAIKMVEDAIDSILPDTQPLPDNRTIDRTGGIYSEGLNQKEQKMESGNGIAEERKEESVSKEVNKPNQKLSRNWSNLKKVVLLRRFIKALEKVRKFNPREPRYLPLEPDSEDEKVQLRHQDMAERKGTEEWMLDYALRQVVSKLTPARKRKVELLVEAFETVVPTVKH*