AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1160430

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1160430 MtrunA17_Chr7g0256351 95.251 379 18 0 1 379 1 379 0.0 748
Msa1160430 MtrunA17_Chr6g0488451 73.995 373 86 3 6 378 2 363 0.0 551
Msa1160430 MtrunA17_Chr6g0488431 60.909 110 38 1 6 115 4 108 2.26e-40 139
Msa1160430 MtrunA17_Chr6g0488421 50.000 106 27 1 125 230 22 101 7.34e-26 109
Msa1160430 MtrunA17_Chr6g0488421 65.909 44 15 0 270 313 331 374 1.27e-11 66.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1160430 AT5G56780.1 42.051 390 187 9 1 380 11 371 1.81e-91 283
Msa1160430 AT5G56770.1 42.529 174 76 4 2 174 51 201 7.06e-36 132

Find 143 sgRNAs with CRISPR-Local

Find 260 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCACAACCTTCCTCAGAAAT+TGG 0.157069 7_4:-50346128 Msa1160430:CDS
TTATTCACTTGCGTCGTCTT+AGG 0.164654 7_4:+50347008 None:intergenic
CTACATCATGGCTGGCATTT+TGG 0.209063 7_4:+50344562 None:intergenic
AACGGGAAGGTCATTGTTTC+AGG 0.214002 7_4:-50345906 Msa1160430:CDS
TTCTCCTCCCTTTATGTTCC+TGG 0.242712 7_4:+50344412 None:intergenic
GGCAGCTTGCTTGATTTAAT+TGG 0.245613 7_4:+50344888 None:intergenic
CCGATGGTTCTATTTGTAAA+AGG 0.246592 7_4:-50344710 Msa1160430:CDS
AGCTGTGTCGCGTAGTAATC+TGG 0.263388 7_4:-50346080 Msa1160430:CDS
GATTCCACATATAATGGTTT+TGG 0.263571 7_4:+50344491 None:intergenic
GCTTCCCAATTGTTTATAGA+TGG 0.289991 7_4:-50345868 Msa1160430:CDS
TTGGTATCCCCACTTTCCTC+TGG 0.290433 7_4:+50344907 None:intergenic
AAACCATCTAAATTCATATA+TGG 0.291135 7_4:+50344262 None:intergenic
CAAGATGATTCCACATATAA+TGG 0.291500 7_4:+50344485 None:intergenic
ATTCTCATTCCTTTGTGTTC+AGG 0.303340 7_4:+50344660 None:intergenic
GGCATTTCACAACTTGCTTC+AGG 0.321701 7_4:-50347115 Msa1160430:five_prime_UTR
TGTAGAAGACAACCGGTTAA+AGG 0.332466 7_4:-50344447 Msa1160430:CDS
TCAAGTTAAGGAACTTTGTT+TGG 0.338399 7_4:-50347072 Msa1160430:five_prime_UTR
AAACCATATATGAATTTAGA+TGG 0.345737 7_4:-50344265 Msa1160430:three_prime_UTR
CTTGGGTGATCTGATTGCTT+TGG 0.351144 7_4:+50344623 None:intergenic
TTCTTATTGGTCCTTCTGAT+TGG 0.353606 7_4:-50346195 Msa1160430:CDS
GCATTGTAGGTAATGCTTAT+AGG 0.363449 7_4:-50344587 Msa1160430:CDS
GTCAAATAGTTGTAGCTAAT+AGG 0.383020 7_4:-50344103 Msa1160430:three_prime_UTR
TCAGAATTAGAAAGCATTGT+AGG 0.383504 7_4:-50344600 Msa1160430:CDS
AAGGTCTTAATTCCAGCATC+TGG 0.388956 7_4:-50344185 Msa1160430:three_prime_UTR
GGTGAAAGGTAGAAGCAATT+TGG 0.393179 7_4:+50344929 None:intergenic
AAAAGGTGCCAGGAACATAA+AGG 0.395561 7_4:-50344420 Msa1160430:CDS
GGAGCCCATCTATAAACAAT+TGG 0.397811 7_4:+50345863 None:intergenic
GAAGAATCTAATTCAAGTTA+AGG 0.403150 7_4:-50347084 Msa1160430:five_prime_UTR
AAACTTGAAGAAATTCTCAT+TGG 0.408901 7_4:-50347151 Msa1160430:five_prime_UTR
AACCGGTTAAAGGAAGAAAA+AGG 0.410668 7_4:-50344437 Msa1160430:CDS
TATTTGTATTAATTCCTTGA+AGG 0.412691 7_4:-50344026 Msa1160430:three_prime_UTR
CATGAGAATGCTAAAATTTG+CGG 0.413022 7_4:-50344744 Msa1160430:CDS
CGCATAGTTGTGGTTTACCT+TGG 0.426319 7_4:-50346022 Msa1160430:CDS
GCCTCTGACAGATGACAAAC+TGG 0.430967 7_4:-50344868 Msa1160430:CDS
TCTTATTGGTCCTTCTGATT+GGG 0.433564 7_4:-50346194 Msa1160430:CDS
CACAACCTTCCTCAGAAATT+GGG 0.434094 7_4:-50346127 Msa1160430:CDS
GTCACGTCCTTGGATAGTTC+AGG 0.435030 7_4:-50344790 Msa1160430:CDS
CCCGTGTGTTCAAATTAAAC+AGG 0.435752 7_4:-50344812 Msa1160430:CDS
AATTAAACAGGTCACGTCCT+TGG 0.438593 7_4:-50344800 Msa1160430:CDS
TATTCACTTGCGTCGTCTTA+GGG 0.441443 7_4:+50347009 None:intergenic
GCAGCTGAGATTCTGTTCTC+AGG 0.444652 7_4:+50345066 None:intergenic
CAGATACAATACAACCTTCA+AGG 0.449780 7_4:+50344012 None:intergenic
CATTATATGTGGAATCATCT+TGG 0.451174 7_4:-50344484 Msa1160430:CDS
GAAATAACAAACAGCTCTCT+AGG 0.454495 7_4:-50344131 Msa1160430:three_prime_UTR
TACTTGTTGAAGCAGGAGTT+AGG 0.457015 7_4:-50343975 Msa1160430:three_prime_UTR
AAGACGACGCAAGTGAATAA+TGG 0.458982 7_4:-50347005 Msa1160430:exon
GTGGAGGGTCTTCTACATCA+TGG 0.463412 7_4:+50344550 None:intergenic
CTTCCCAATTGTTTATAGAT+GGG 0.464946 7_4:-50345867 Msa1160430:CDS
GGGTGATCTGATTGCTTTGG+CGG 0.466767 7_4:+50344626 None:intergenic
AGAGCAAGACTCCAGCGTTA+TGG 0.467691 7_4:-50345983 Msa1160430:CDS
CCTTCCTCAGAAATTGGGTC+CGG 0.470635 7_4:-50346122 Msa1160430:CDS
AAGTCAGAGGGTGCAATTGA+AGG 0.474909 7_4:+50347559 None:intergenic
TGACTCTTAACCATTCTTTG+TGG 0.474955 7_4:+50344531 None:intergenic
GGAAGACTATTCCAAAGAAA+AGG 0.474965 7_4:-50346173 Msa1160430:CDS
AAGGTTGTGAATCCTGTATC+TGG 0.479106 7_4:+50346141 None:intergenic
AGCATTTGAAGAATATCATC+AGG 0.489085 7_4:+50344993 None:intergenic
AGGAAGGATCTACCAGATAC+AGG 0.491164 7_4:-50346153 Msa1160430:CDS
AACATTGTGCGAAGACGTAA+AGG 0.491695 7_4:-50344225 Msa1160430:three_prime_UTR
ATGCTCAACAAATTAGCTTC+AGG 0.496009 7_4:-50344975 Msa1160430:CDS
CTCCAGCGTTATGGCAGGAA+TGG 0.496259 7_4:-50345974 Msa1160430:CDS
TGGCAAGCTTGTAAATTTCA+CGG 0.499268 7_4:+50346056 None:intergenic
CTTCCTCAGAAATTGGGTCC+GGG 0.499654 7_4:-50346121 Msa1160430:CDS
CCCACTTTCCTCTGGGTGAA+AGG 0.500019 7_4:+50344915 None:intergenic
AATGCTTTCTAATTCTGACT+TGG 0.501548 7_4:+50344605 None:intergenic
TGGTATCCCCACTTTCCTCT+GGG 0.502512 7_4:+50344908 None:intergenic
ATGCTTTCTAATTCTGACTT+GGG 0.502963 7_4:+50344606 None:intergenic
TCTTAACCATTCTTTGTGGA+GGG 0.504208 7_4:+50344535 None:intergenic
TGTGATAACCGTTGTTCACT+AGG 0.504562 7_4:+50347042 None:intergenic
CTCTTAACCATTCTTTGTGG+AGG 0.504735 7_4:+50344534 None:intergenic
ATCCACTTGTAGAAGACAAC+CGG 0.506149 7_4:-50344454 Msa1160430:CDS
AGAAGACCCTCCACAAAGAA+TGG 0.506283 7_4:-50344541 Msa1160430:CDS
GAGCCCATCTATAAACAATT+GGG 0.508603 7_4:+50345864 None:intergenic
GGGTAGAAGAAGGCGGTTGA+AGG 0.508905 7_4:-50344204 Msa1160430:three_prime_UTR
ACTTGCATATATCCAGATGC+TGG 0.516224 7_4:+50344173 None:intergenic
TTCTATTTGTAAAAGGCCAC+CGG 0.517076 7_4:-50344703 Msa1160430:CDS
ATGATTCTAGCTTCTCCCGC+TGG 0.517190 7_4:-50346940 Msa1160430:CDS
TGTTGAAGCAGGAGTTAGGT+TGG 0.521433 7_4:-50343971 Msa1160430:three_prime_UTR
ACCTGTTTAATTTGAACACA+CGG 0.522258 7_4:+50344811 None:intergenic
GATGACTCTTCTCTACGAAC+GGG 0.523910 7_4:-50345923 Msa1160430:CDS
AGGGTCTTCTACATCATGGC+TGG 0.525907 7_4:+50344554 None:intergenic
CTCATTGGAATACAATATGA+TGG 0.528612 7_4:-50347136 Msa1160430:five_prime_UTR
AACCGGTTGTCTTCTACAAG+TGG 0.530917 7_4:+50344452 None:intergenic
ATCGCCAAAACCATTATATG+TGG 0.534440 7_4:-50344495 Msa1160430:CDS
TTAGTACATTTGATTATGCA+TGG 0.537544 7_4:-50345043 Msa1160430:CDS
AAAGGTGCCAGGAACATAAA+GGG 0.538956 7_4:-50344419 Msa1160430:CDS
ACCTTTCACCCAGAGGAAAG+TGG 0.539145 7_4:-50344916 Msa1160430:CDS
TGTGGAATCATCTTGGATGA+TGG 0.539642 7_4:-50344477 Msa1160430:CDS
CAGCTGAGATTCTGTTCTCA+GGG 0.541120 7_4:+50345067 None:intergenic
CCTTTCACCCAGAGGAAAGT+GGG 0.542001 7_4:-50344915 Msa1160430:CDS
TGACCCTCGTCGCATAGTTG+TGG 0.547054 7_4:-50346032 Msa1160430:CDS
ACTCCAAGCTCGTACACCCC+CGG 0.547377 7_4:+50346103 None:intergenic
TTAATTTGAACACACGGGAT+AGG 0.547956 7_4:+50344817 None:intergenic
CAAGACTCCAGCGTTATGGC+AGG 0.554748 7_4:-50345979 Msa1160430:CDS
CTCCATTCCTGCCATAACGC+TGG 0.555122 7_4:+50345972 None:intergenic
TTCTAGCTTCTCCCGCTGGA+AGG 0.556013 7_4:-50346936 Msa1160430:intron
GCTGTGTCGCGTAGTAATCT+GGG 0.557788 7_4:-50346079 Msa1160430:CDS
TTCCTCAGAAATTGGGTCCG+GGG 0.559029 7_4:-50346120 Msa1160430:CDS
TAAAATTTGCGGAGTGATGT+TGG 0.559942 7_4:-50344733 Msa1160430:CDS
ACAAGAATACTTGTTGAAGC+AGG 0.561254 7_4:-50343982 Msa1160430:three_prime_UTR
GTTAAGAGTCATGTTGATGA+GGG 0.562383 7_4:-50344519 Msa1160430:CDS
GAATAGTCTTCCCAATCAGA+AGG 0.574116 7_4:+50346184 None:intergenic
GGTTAAGAGTCATGTTGATG+AGG 0.575589 7_4:-50344520 Msa1160430:CDS
CCGGACCCAATTTCTGAGGA+AGG 0.577737 7_4:+50346122 None:intergenic
GGTCGTCAACAGATTGAAGC+GGG 0.577925 7_4:-50346984 Msa1160430:CDS
AGATGACTCTTCTCTACGAA+CGG 0.578063 7_4:-50345924 Msa1160430:CDS
TCCTCAGAAATTGGGTCCGG+GGG 0.579255 7_4:-50346119 Msa1160430:CDS
GCAAGTATAAATTGACATTG+TGG 0.581260 7_4:-50344156 Msa1160430:three_prime_UTR
TGGATAGTTCAGGATACCAC+TGG 0.582070 7_4:-50344780 Msa1160430:CDS
TGCGGAGTGATGTTGGCCGA+TGG 0.582561 7_4:-50344726 Msa1160430:CDS
AACTATGCGACGAGGGTCAG+TGG 0.584771 7_4:+50346036 None:intergenic
CCTGTTTAATTTGAACACAC+GGG 0.590009 7_4:+50344812 None:intergenic
TGATCTGATTGCTTTGGCGG+CGG 0.601310 7_4:+50344629 None:intergenic
TCCAGTTTGTCATCTGTCAG+AGG 0.601705 7_4:+50344867 None:intergenic
CTTCTGAATCTGATGTATAG+CGG 0.603816 7_4:+50347530 None:intergenic
AAGACGTAAAGGGTAGAAGA+AGG 0.610367 7_4:-50344214 Msa1160430:three_prime_UTR
TGCTTCTACCTTTCACCCAG+AGG 0.610412 7_4:-50344923 Msa1160430:CDS
GACTATTCCAAAGAAAAGGA+AGG 0.610651 7_4:-50346169 Msa1160430:CDS
ACATTGTGCGAAGACGTAAA+GGG 0.614477 7_4:-50344224 Msa1160430:three_prime_UTR
GTGGTATCCTGAACTATCCA+AGG 0.621004 7_4:+50344783 None:intergenic
GTAGCACAAGAATTCATACA+TGG 0.628503 7_4:+50347590 None:intergenic
ATTGATATGAACCTTCCAGC+GGG 0.629000 7_4:+50346925 None:intergenic
ACACAATCAGCAATGGTACA+CGG 0.630313 7_4:-50345019 Msa1160430:CDS
GCATGGAACACAATCAGCAA+TGG 0.645734 7_4:-50345026 Msa1160430:CDS
TGGTCGTCAACAGATTGAAG+CGG 0.649124 7_4:-50346985 Msa1160430:CDS
TATTGAACAGATGCAAAACG+AGG 0.650690 7_4:-50345096 Msa1160430:intron
TAGCACAAGAATTCATACAT+GGG 0.658198 7_4:+50347591 None:intergenic
GCACTTCTCCTAGTGAACAA+CGG 0.659176 7_4:-50347050 Msa1160430:five_prime_UTR
ATGAGTGGCACTACCACCAG+TGG 0.671537 7_4:+50344764 None:intergenic
AGCACAAGAATTCATACATG+GGG 0.673117 7_4:+50347592 None:intergenic
ACTCTTCTCTACGAACGGGA+AGG 0.673197 7_4:-50345919 Msa1160430:CDS
TAGCGGTTTGAGAAGTCAGA+GGG 0.674992 7_4:+50347547 None:intergenic
CTTTCACCCAGAGGAAAGTG+GGG 0.681368 7_4:-50344914 Msa1160430:CDS
ATTGAACAGATGCAAAACGA+GGG 0.682609 7_4:-50345095 Msa1160430:intron
ATAGCGGTTTGAGAAGTCAG+AGG 0.684846 7_4:+50347546 None:intergenic
AAACCACAACTATGCGACGA+GGG 0.687191 7_4:+50346029 None:intergenic
AATTGATATGAACCTTCCAG+CGG 0.711586 7_4:+50346924 None:intergenic
ACGTAAAGGGTAGAAGAAGG+CGG 0.717504 7_4:-50344211 Msa1160430:three_prime_UTR
GTGAGGTGTCCTGAACACAA+AGG 0.719035 7_4:-50344669 Msa1160430:CDS
ATAGTTCAGGATACCACTGG+TGG 0.727765 7_4:-50344777 Msa1160430:CDS
TAAACCACAACTATGCGACG+AGG 0.730870 7_4:+50346028 None:intergenic
GGTGCCAGGAACATAAAGGG+AGG 0.732457 7_4:-50344416 Msa1160430:CDS
AAACTGGATGAAGCTGACAG+TGG 0.772229 7_4:-50344852 Msa1160430:CDS
CAATCAGCAATGGTACACGG+CGG 0.806089 7_4:-50345016 Msa1160430:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTTTTTTATTTGGTTAT+TGG - chr7_4:50344986-50345005 Msa1160430:CDS 10.0%
!! TTGAAAAAATAATTGAATTT+AGG - chr7_4:50347194-50347213 Msa1160430:intron 10.0%
!!! GAACAAGATATTTTTTTATT+TGG - chr7_4:50344979-50344998 Msa1160430:CDS 15.0%
!! TTGTTAACTTAACTATAATA+TGG + chr7_4:50345228-50345247 None:intergenic 15.0%
!!! TATATAAAAGTGCAATTTTT+TGG - chr7_4:50346422-50346441 Msa1160430:intron 15.0%
!!! ATTCTCCTATTTTCAAATTT+TGG - chr7_4:50344078-50344097 Msa1160430:three_prime_UTR 20.0%
!! GAATTCCAAAATTTGAAAAT+AGG + chr7_4:50344086-50344105 None:intergenic 20.0%
!! ACAATTTATATATATGTTGC+TGG + chr7_4:50344350-50344369 None:intergenic 20.0%
!!! TTCCATTTAGATAATTTTCT+GGG - chr7_4:50344841-50344860 Msa1160430:CDS 20.0%
!!! AAATTGAAAGCTTTAAAAAG+TGG + chr7_4:50344870-50344889 None:intergenic 20.0%
!! ATTTCAAAAAAGTCATTGAT+TGG - chr7_4:50345856-50345875 Msa1160430:intron 20.0%
!! AAATTATCATAATAGACTAG+TGG + chr7_4:50346290-50346309 None:intergenic 20.0%
!! AAACCATATATGAATTTAGA+TGG - chr7_4:50347307-50347326 Msa1160430:intron 20.0%
!! AAACCATCTAAATTCATATA+TGG + chr7_4:50347313-50347332 None:intergenic 20.0%
!! TATTTGTATTAATTCCTTGA+AGG - chr7_4:50347546-50347565 Msa1160430:five_prime_UTR 20.0%
! TAATTCTAAATTGTGTATGG+CGG + chr7_4:50344173-50344192 None:intergenic 25.0%
! ACGTAATTCTAAATTGTGTA+TGG + chr7_4:50344176-50344195 None:intergenic 25.0%
! GATATACAATACAATTCAAC+TGG - chr7_4:50344262-50344281 Msa1160430:three_prime_UTR 25.0%
! AAACTTGAAGAAATTCTCAT+TGG - chr7_4:50344421-50344440 Msa1160430:CDS 25.0%
!! GAAGAATCTAATTCAAGTTA+AGG - chr7_4:50344488-50344507 Msa1160430:CDS 25.0%
!! CACTAAAAGAATGAAGTATT+AGG + chr7_4:50344798-50344817 None:intergenic 25.0%
! CAGAAAATTATCTAAATGGA+AGG + chr7_4:50344842-50344861 None:intergenic 25.0%
!! CTTCCATTTAGATAATTTTC+TGG - chr7_4:50344840-50344859 Msa1160430:CDS 25.0%
!!! AATCAATAGCTTTTTCTTCA+AGG + chr7_4:50344896-50344915 None:intergenic 25.0%
!! AAAAGCTATTGATTGTATGA+TGG - chr7_4:50344902-50344921 Msa1160430:CDS 25.0%
! TCAAATAAACACACATACAT+GGG - chr7_4:50345028-50345047 Msa1160430:CDS 25.0%
!! TAGTTTTCGTCATTCTATTA+TGG + chr7_4:50345284-50345303 None:intergenic 25.0%
!! AACTGTTTTCAGATTCTTAT+TGG - chr7_4:50345364-50345383 Msa1160430:intron 25.0%
! AATATCAGATATGTACTTAC+AGG + chr7_4:50345733-50345752 None:intergenic 25.0%
! ACGTTATCATATGATAGTAT+AGG - chr7_4:50345885-50345904 Msa1160430:CDS 25.0%
! CGTTATCATATGATAGTATA+GGG - chr7_4:50345886-50345905 Msa1160430:CDS 25.0%
! ACCTAAATTACATAGATTTC+AGG + chr7_4:50345993-50346012 None:intergenic 25.0%
!! TAACCCAATTCCATTTTAAA+TGG - chr7_4:50346133-50346152 Msa1160430:CDS 25.0%
!! AACCCAATTCCATTTTAAAT+GGG - chr7_4:50346134-50346153 Msa1160430:CDS 25.0%
!!! AATTTTGATTGTGTCACTTT+TGG + chr7_4:50346226-50346245 None:intergenic 25.0%
! AAGTGACACAATCAAAATTT+AGG - chr7_4:50346227-50346246 Msa1160430:intron 25.0%
!!! GCAATTTTTTGGAACTATAA+TGG - chr7_4:50346433-50346452 Msa1160430:intron 25.0%
! TTAGTACATTTGATTATGCA+TGG - chr7_4:50346529-50346548 Msa1160430:intron 25.0%
!! GCTATAATAAGTACATTTTG+TGG + chr7_4:50347264-50347283 None:intergenic 25.0%
! AGGTAGTAAGATAAAAATGT+TGG - chr7_4:50347489-50347508 Msa1160430:intron 25.0%
TAGCACAAGAATTCATACAT+GGG + chr7_4:50343984-50344003 None:intergenic 30.0%
! CAATTTAGAATTACGTGTTG+TGG - chr7_4:50344180-50344199 Msa1160430:three_prime_UTR 30.0%
AATACAATTCAACTGGATCT+GGG - chr7_4:50344269-50344288 Msa1160430:three_prime_UTR 30.0%
AAATGAAAATGCATCTCACA+TGG - chr7_4:50344310-50344329 Msa1160430:three_prime_UTR 30.0%
TGCAATCTGTGAAAAGAAAT+CGG + chr7_4:50344381-50344400 None:intergenic 30.0%
CTCATTGGAATACAATATGA+TGG - chr7_4:50344436-50344455 Msa1160430:CDS 30.0%
TCAAGTTAAGGAACTTTGTT+TGG - chr7_4:50344500-50344519 Msa1160430:CDS 30.0%
!! AGCTAGAATCATGTTTTGTT+CGG + chr7_4:50344624-50344643 None:intergenic 30.0%
! TTAATGTTTCTACGAATCTG+AGG - chr7_4:50344720-50344739 Msa1160430:CDS 30.0%
! GAAGTATTAGGCTTTACTTT+AGG + chr7_4:50344786-50344805 None:intergenic 30.0%
AGCCCAGAAAATTATCTAAA+TGG + chr7_4:50344846-50344865 None:intergenic 30.0%
CTCAAATAAACACACATACA+TGG - chr7_4:50345027-50345046 Msa1160430:CDS 30.0%
CAAATAAACACACATACATG+GGG - chr7_4:50345029-50345048 Msa1160430:CDS 30.0%
TTCTTTCAACTGTACAAATC+TGG - chr7_4:50345305-50345324 Msa1160430:intron 30.0%
! TTTCAGGAGATATTTTCACA+AGG - chr7_4:50345682-50345701 Msa1160430:intron 30.0%
CTTCCCAATTGTTTATAGAT+GGG - chr7_4:50345705-50345724 Msa1160430:intron 30.0%
TGCAACTGAACATGTATTAA+TGG - chr7_4:50345786-50345805 Msa1160430:intron 30.0%
GCAACTGAACATGTATTAAT+GGG - chr7_4:50345787-50345806 Msa1160430:intron 30.0%
!! TGAACATGTATTAATGGGTT+CGG - chr7_4:50345792-50345811 Msa1160430:intron 30.0%
TAGTATAGGGTATAACTCAA+AGG - chr7_4:50345899-50345918 Msa1160430:CDS 30.0%
AATTCATAGCTTAAGAATGG+AGG + chr7_4:50345951-50345970 None:intergenic 30.0%
GCTAATTCATAGCTTAAGAA+TGG + chr7_4:50345954-50345973 None:intergenic 30.0%
AATTAGCAGTGCTCATTTAA+AGG - chr7_4:50345967-50345986 Msa1160430:CDS 30.0%
GCCTGAAATCTATGTAATTT+AGG - chr7_4:50345989-50346008 Msa1160430:CDS 30.0%
! GACCCATTTAAAATGGAATT+GGG + chr7_4:50346139-50346158 None:intergenic 30.0%
AAAACTGGACCCATTTAAAA+TGG + chr7_4:50346146-50346165 None:intergenic 30.0%
!! TTCAGTTCTAGAGATATGTT+AGG - chr7_4:50346198-50346217 Msa1160430:CDS 30.0%
! CACAATCAAAATTTAGGACA+AGG - chr7_4:50346233-50346252 Msa1160430:intron 30.0%
! TCAAAATTTAGGACAAGGTT+AGG - chr7_4:50346238-50346257 Msa1160430:intron 30.0%
! CAAAATTTAGGACAAGGTTA+GGG - chr7_4:50346239-50346258 Msa1160430:intron 30.0%
CAAAATCTACTGTTGATATG+TGG - chr7_4:50346346-50346365 Msa1160430:intron 30.0%
AGCATTTGAAGAATATCATC+AGG + chr7_4:50346582-50346601 None:intergenic 30.0%
!! ACCTGTTTAATTTGAACACA+CGG + chr7_4:50346764-50346783 None:intergenic 30.0%
!! AATTTTAGCATTCTCATGAG+TGG + chr7_4:50346826-50346845 None:intergenic 30.0%
CATGAGAATGCTAAAATTTG+CGG - chr7_4:50346828-50346847 Msa1160430:intron 30.0%
! CCTTTTACAAATAGAACCAT+CGG + chr7_4:50346865-50346884 None:intergenic 30.0%
ATGCTTTCTAATTCTGACTT+GGG + chr7_4:50346969-50346988 None:intergenic 30.0%
AATGCTTTCTAATTCTGACT+TGG + chr7_4:50346970-50346989 None:intergenic 30.0%
!! TCAGAATTAGAAAGCATTGT+AGG - chr7_4:50346972-50346991 Msa1160430:CDS 30.0%
! GATTCCACATATAATGGTTT+TGG + chr7_4:50347084-50347103 None:intergenic 30.0%
CAAGATGATTCCACATATAA+TGG + chr7_4:50347090-50347109 None:intergenic 30.0%
CATTATATGTGGAATCATCT+TGG - chr7_4:50347088-50347107 Msa1160430:five_prime_UTR 30.0%
!! TAGATGGTTTTTGTTGTACA+AGG - chr7_4:50347323-50347342 Msa1160430:intron 30.0%
GCAAGTATAAATTGACATTG+TGG - chr7_4:50347416-50347435 Msa1160430:intron 30.0%
GTCAAATAGTTGTAGCTAAT+AGG - chr7_4:50347469-50347488 Msa1160430:intron 30.0%
AGCACAAGAATTCATACATG+GGG + chr7_4:50343983-50344002 None:intergenic 35.0%
GTAGCACAAGAATTCATACA+TGG + chr7_4:50343985-50344004 None:intergenic 35.0%
CTTCTGAATCTGATGTATAG+CGG + chr7_4:50344045-50344064 None:intergenic 35.0%
GGAATAGTGTTATAGCATAG+CGG - chr7_4:50344201-50344220 Msa1160430:three_prime_UTR 35.0%
CAATACAATTCAACTGGATC+TGG - chr7_4:50344268-50344287 Msa1160430:three_prime_UTR 35.0%
ATCTGTGAAAAGAAATCGGA+TGG + chr7_4:50344377-50344396 None:intergenic 35.0%
AATTGATATGAACCTTCCAG+CGG + chr7_4:50344651-50344670 None:intergenic 35.0%
GTGTTTATTTGAGCATGTGT+TGG + chr7_4:50345020-50345039 None:intergenic 35.0%
GTTACCTTCTTACCTTGATT+TGG - chr7_4:50345327-50345346 Msa1160430:intron 35.0%
TTCTTATTGGTCCTTCTGAT+TGG - chr7_4:50345377-50345396 Msa1160430:intron 35.0%
TCTTATTGGTCCTTCTGATT+GGG - chr7_4:50345378-50345397 Msa1160430:intron 35.0%
GGAAGACTATTCCAAAGAAA+AGG - chr7_4:50345399-50345418 Msa1160430:intron 35.0%
GACTATTCCAAAGAAAAGGA+AGG - chr7_4:50345403-50345422 Msa1160430:intron 35.0%
TGGCAAGCTTGTAAATTTCA+CGG + chr7_4:50345519-50345538 None:intergenic 35.0%
GCTTCCCAATTGTTTATAGA+TGG - chr7_4:50345704-50345723 Msa1160430:intron 35.0%
GAGCCCATCTATAAACAATT+GGG + chr7_4:50345711-50345730 None:intergenic 35.0%
! ACTATTAGCTTCAGCATCTT+AGG - chr7_4:50345830-50345849 Msa1160430:intron 35.0%
! AGGGTATAACTCAAAGGTTT+TGG - chr7_4:50345905-50345924 Msa1160430:CDS 35.0%
! GGACCCATTTAAAATGGAAT+TGG + chr7_4:50346140-50346159 None:intergenic 35.0%
TCTATACCTAATGTCTCTGA+TGG - chr7_4:50346319-50346338 Msa1160430:intron 35.0%
TGAATTCCATCAGAGACATT+AGG + chr7_4:50346328-50346347 None:intergenic 35.0%
! GTGTCGCATTTTACGAAATT+TGG - chr7_4:50346368-50346387 Msa1160430:intron 35.0%
TATTGAACAGATGCAAAACG+AGG - chr7_4:50346476-50346495 Msa1160430:intron 35.0%
ATTGAACAGATGCAAAACGA+GGG - chr7_4:50346477-50346496 Msa1160430:intron 35.0%
! ATGCTCAACAAATTAGCTTC+AGG - chr7_4:50346597-50346616 Msa1160430:intron 35.0%
! CACTAGAACATTTTCAGATG+TGG - chr7_4:50346620-50346639 Msa1160430:intron 35.0%
! TTAATTTGAACACACGGGAT+AGG + chr7_4:50346758-50346777 None:intergenic 35.0%
!! CCTGTTTAATTTGAACACAC+GGG + chr7_4:50346763-50346782 None:intergenic 35.0%
TAAAATTTGCGGAGTGATGT+TGG - chr7_4:50346839-50346858 Msa1160430:intron 35.0%
! CCGATGGTTCTATTTGTAAA+AGG - chr7_4:50346862-50346881 Msa1160430:intron 35.0%
TTCTATTTGTAAAAGGCCAC+CGG - chr7_4:50346869-50346888 Msa1160430:intron 35.0%
ATTCTCATTCCTTTGTGTTC+AGG + chr7_4:50346915-50346934 None:intergenic 35.0%
GCATTGTAGGTAATGCTTAT+AGG - chr7_4:50346985-50347004 Msa1160430:CDS 35.0%
TCTTAACCATTCTTTGTGGA+GGG + chr7_4:50347040-50347059 None:intergenic 35.0%
TGACTCTTAACCATTCTTTG+TGG + chr7_4:50347044-50347063 None:intergenic 35.0%
! GTTAAGAGTCATGTTGATGA+GGG - chr7_4:50347053-50347072 Msa1160430:five_prime_UTR 35.0%
ATCGCCAAAACCATTATATG+TGG - chr7_4:50347077-50347096 Msa1160430:five_prime_UTR 35.0%
AACCGGTTAAAGGAAGAAAA+AGG - chr7_4:50347135-50347154 Msa1160430:five_prime_UTR 35.0%
! CACCTTTTTCTTCCTTTAAC+CGG + chr7_4:50347140-50347159 None:intergenic 35.0%
GAAATAACAAACAGCTCTCT+AGG - chr7_4:50347441-50347460 Msa1160430:intron 35.0%
CAGATACAATACAACCTTCA+AGG + chr7_4:50347563-50347582 None:intergenic 35.0%
! ACAAGAATACTTGTTGAAGC+AGG - chr7_4:50347590-50347609 Msa1160430:five_prime_UTR 35.0%
! GTGTATGGCGGAACAAATAA+CGG + chr7_4:50344161-50344180 None:intergenic 40.0%
AAATGCATCTCACATGGTCA+AGG - chr7_4:50344316-50344335 Msa1160430:three_prime_UTR 40.0%
TGTGATAACCGTTGTTCACT+AGG + chr7_4:50344533-50344552 None:intergenic 40.0%
TATTCACTTGCGTCGTCTTA+GGG + chr7_4:50344566-50344585 None:intergenic 40.0%
TTATTCACTTGCGTCGTCTT+AGG + chr7_4:50344567-50344586 None:intergenic 40.0%
AAGACGACGCAAGTGAATAA+TGG - chr7_4:50344567-50344586 Msa1160430:CDS 40.0%
ATTGATATGAACCTTCCAGC+GGG + chr7_4:50344650-50344669 None:intergenic 40.0%
TTATTTGGTTATTGGCCCAG+TGG - chr7_4:50344994-50345013 Msa1160430:CDS 40.0%
ATAAACACACATACATGGGG+AGG - chr7_4:50345032-50345051 Msa1160430:CDS 40.0%
TAAACACACATACATGGGGA+GGG - chr7_4:50345033-50345052 Msa1160430:CDS 40.0%
GCTATTACAGTCTAGTGGTT+TGG + chr7_4:50345114-50345133 None:intergenic 40.0%
ACCACTAGACTGTAATAGCA+AGG - chr7_4:50345115-50345134 Msa1160430:intron 40.0%
!! TCCTTGCTATTACAGTCTAG+TGG + chr7_4:50345119-50345138 None:intergenic 40.0%
GCAACCAAATCAAGGTAAGA+AGG + chr7_4:50345334-50345353 None:intergenic 40.0%
TAACACGAGCAACCAAATCA+AGG + chr7_4:50345342-50345361 None:intergenic 40.0%
GAATAGTCTTCCCAATCAGA+AGG + chr7_4:50345391-50345410 None:intergenic 40.0%
! GGTAGATCCTTCCTTTTCTT+TGG + chr7_4:50345413-50345432 None:intergenic 40.0%
AAGGTTGTGAATCCTGTATC+TGG + chr7_4:50345434-50345453 None:intergenic 40.0%
TCACAACCTTCCTCAGAAAT+TGG - chr7_4:50345444-50345463 Msa1160430:intron 40.0%
CACAACCTTCCTCAGAAATT+GGG - chr7_4:50345445-50345464 Msa1160430:intron 40.0%
! TCACATTGTCAGCTTTTCCA+AGG + chr7_4:50345570-50345589 None:intergenic 40.0%
AGATGACTCTTCTCTACGAA+CGG - chr7_4:50345648-50345667 Msa1160430:intron 40.0%
GGAGCCCATCTATAAACAAT+TGG + chr7_4:50345712-50345731 None:intergenic 40.0%
! AAATGGGTCCAGTTTTGCTT+TGG - chr7_4:50346150-50346169 Msa1160430:CDS 40.0%
ACACAATCAGCAATGGTACA+CGG - chr7_4:50346553-50346572 Msa1160430:intron 40.0%
GGTGAAAGGTAGAAGCAATT+TGG + chr7_4:50346646-50346665 None:intergenic 40.0%
! GGCAGCTTGCTTGATTTAAT+TGG + chr7_4:50346687-50346706 None:intergenic 40.0%
CCCGTGTGTTCAAATTAAAC+AGG - chr7_4:50346760-50346779 Msa1160430:intron 40.0%
AATTAAACAGGTCACGTCCT+TGG - chr7_4:50346772-50346791 Msa1160430:intron 40.0%
!!! CACCTCACTCTTTTTTCAAC+CGG + chr7_4:50346891-50346910 None:intergenic 40.0%
CTCTTAACCATTCTTTGTGG+AGG + chr7_4:50347041-50347060 None:intergenic 40.0%
GGTTAAGAGTCATGTTGATG+AGG - chr7_4:50347052-50347071 Msa1160430:five_prime_UTR 40.0%
TGTGGAATCATCTTGGATGA+TGG - chr7_4:50347095-50347114 Msa1160430:five_prime_UTR 40.0%
ATCCACTTGTAGAAGACAAC+CGG - chr7_4:50347118-50347137 Msa1160430:five_prime_UTR 40.0%
TGTAGAAGACAACCGGTTAA+AGG - chr7_4:50347125-50347144 Msa1160430:five_prime_UTR 40.0%
!! TAAAGGAAGAAAAAGGTGCC+AGG - chr7_4:50347142-50347161 Msa1160430:five_prime_UTR 40.0%
!! AAAAGGTGCCAGGAACATAA+AGG - chr7_4:50347152-50347171 Msa1160430:five_prime_UTR 40.0%
!! AAAGGTGCCAGGAACATAAA+GGG - chr7_4:50347153-50347172 Msa1160430:five_prime_UTR 40.0%
AACATTGTGCGAAGACGTAA+AGG - chr7_4:50347347-50347366 Msa1160430:intron 40.0%
ACATTGTGCGAAGACGTAAA+GGG - chr7_4:50347348-50347367 Msa1160430:intron 40.0%
AAGACGTAAAGGGTAGAAGA+AGG - chr7_4:50347358-50347377 Msa1160430:intron 40.0%
AAGGTCTTAATTCCAGCATC+TGG - chr7_4:50347387-50347406 Msa1160430:intron 40.0%
ACTTGCATATATCCAGATGC+TGG + chr7_4:50347402-50347421 None:intergenic 40.0%
! TACTTGTTGAAGCAGGAGTT+AGG - chr7_4:50347597-50347616 Msa1160430:five_prime_UTR 40.0%
! AAGTCAGAGGGTGCAATTGA+AGG + chr7_4:50344016-50344035 None:intergenic 45.0%
TAGCGGTTTGAGAAGTCAGA+GGG + chr7_4:50344028-50344047 None:intergenic 45.0%
ATAGCGGTTTGAGAAGTCAG+AGG + chr7_4:50344029-50344048 None:intergenic 45.0%
! GGCATTTCACAACTTGCTTC+AGG - chr7_4:50344457-50344476 Msa1160430:CDS 45.0%
GCACTTCTCCTAGTGAACAA+CGG - chr7_4:50344522-50344541 Msa1160430:CDS 45.0%
TGGTCGTCAACAGATTGAAG+CGG - chr7_4:50344587-50344606 Msa1160430:CDS 45.0%
GGCTTTACTTTAGGCATCAC+TGG + chr7_4:50344777-50344796 None:intergenic 45.0%
! TGATGGCGTAGTGCTTAAAG+AGG - chr7_4:50344919-50344938 Msa1160430:CDS 45.0%
AAACACACATACATGGGGAG+GGG - chr7_4:50345034-50345053 Msa1160430:CDS 45.0%
! GACATTTTACGTGGAATCCC+AGG + chr7_4:50345084-50345103 None:intergenic 45.0%
!!! GGCTTTGAGGACATTTTACG+TGG + chr7_4:50345093-50345112 None:intergenic 45.0%
!! AGTCTAGTGGTTTGGCTTTG+AGG + chr7_4:50345106-50345125 None:intergenic 45.0%
AGGAAGGATCTACCAGATAC+AGG - chr7_4:50345419-50345438 Msa1160430:intron 45.0%
AAACCACAACTATGCGACGA+GGG + chr7_4:50345546-50345565 None:intergenic 45.0%
TAAACCACAACTATGCGACG+AGG + chr7_4:50345547-50345566 None:intergenic 45.0%
CGCATAGTTGTGGTTTACCT+TGG - chr7_4:50345550-50345569 Msa1160430:intron 45.0%
GATGACTCTTCTCTACGAAC+GGG - chr7_4:50345649-50345668 Msa1160430:intron 45.0%
AACGGGAAGGTCATTGTTTC+AGG - chr7_4:50345666-50345685 Msa1160430:intron 45.0%
ACTACAGGCCAAAGCAAAAC+TGG + chr7_4:50346161-50346180 None:intergenic 45.0%
AACCCAATACACAGCACTAC+AGG + chr7_4:50346176-50346195 None:intergenic 45.0%
CAGCTGAGATTCTGTTCTCA+GGG + chr7_4:50346508-50346527 None:intergenic 45.0%
GCATGGAACACAATCAGCAA+TGG - chr7_4:50346546-50346565 Msa1160430:intron 45.0%
TCCAGTTTGTCATCTGTCAG+AGG + chr7_4:50346708-50346727 None:intergenic 45.0%
AAACTGGATGAAGCTGACAG+TGG - chr7_4:50346720-50346739 Msa1160430:intron 45.0%
GTGGTATCCTGAACTATCCA+AGG + chr7_4:50346792-50346811 None:intergenic 45.0%
TGGATAGTTCAGGATACCAC+TGG - chr7_4:50346792-50346811 Msa1160430:intron 45.0%
ATAGTTCAGGATACCACTGG+TGG - chr7_4:50346795-50346814 Msa1160430:intron 45.0%
!!! CTCACTCTTTTTTCAACCGG+TGG + chr7_4:50346888-50346907 None:intergenic 45.0%
! CACCGGTTGAAAAAAGAGTG+AGG - chr7_4:50346886-50346905 Msa1160430:intron 45.0%
CTTGGGTGATCTGATTGCTT+TGG + chr7_4:50346952-50346971 None:intergenic 45.0%
! CTACATCATGGCTGGCATTT+TGG + chr7_4:50347013-50347032 None:intergenic 45.0%
AGAAGACCCTCCACAAAGAA+TGG - chr7_4:50347031-50347050 Msa1160430:five_prime_UTR 45.0%
AACCGGTTGTCTTCTACAAG+TGG + chr7_4:50347123-50347142 None:intergenic 45.0%
TTCTCCTCCCTTTATGTTCC+TGG + chr7_4:50347163-50347182 None:intergenic 45.0%
ACGTAAAGGGTAGAAGAAGG+CGG - chr7_4:50347361-50347380 Msa1160430:intron 45.0%
TGTTGAAGCAGGAGTTAGGT+TGG - chr7_4:50347601-50347620 Msa1160430:five_prime_UTR 45.0%
GGTCGTCAACAGATTGAAGC+GGG - chr7_4:50344588-50344607 Msa1160430:CDS 50.0%
!! ATGATTCTAGCTTCTCCCGC+TGG - chr7_4:50344632-50344651 Msa1160430:CDS 50.0%
! TTGAGCATGTGTTGGCCACT+GGG + chr7_4:50345012-50345031 None:intergenic 50.0%
! TTTGAGCATGTGTTGGCCAC+TGG + chr7_4:50345013-50345032 None:intergenic 50.0%
AACACACATACATGGGGAGG+GGG - chr7_4:50345035-50345054 Msa1160430:CDS 50.0%
CCTTCCTCAGAAATTGGGTC+CGG - chr7_4:50345450-50345469 Msa1160430:intron 50.0%
CTTCCTCAGAAATTGGGTCC+GGG - chr7_4:50345451-50345470 Msa1160430:intron 50.0%
TTCCTCAGAAATTGGGTCCG+GGG - chr7_4:50345452-50345471 Msa1160430:intron 50.0%
AGCTGTGTCGCGTAGTAATC+TGG - chr7_4:50345492-50345511 Msa1160430:intron 50.0%
GCTGTGTCGCGTAGTAATCT+GGG - chr7_4:50345493-50345512 Msa1160430:intron 50.0%
AGAGCAAGACTCCAGCGTTA+TGG - chr7_4:50345589-50345608 Msa1160430:intron 50.0%
ACTCTTCTCTACGAACGGGA+AGG - chr7_4:50345653-50345672 Msa1160430:intron 50.0%
TGGCCTGTAGTGCTGTGTAT+TGG - chr7_4:50346170-50346189 Msa1160430:CDS 50.0%
GGCCTGTAGTGCTGTGTATT+GGG - chr7_4:50346171-50346190 Msa1160430:CDS 50.0%
ACTAGTGGCAAGCAAGAGAC+GGG + chr7_4:50346275-50346294 None:intergenic 50.0%
GACTAGTGGCAAGCAAGAGA+CGG + chr7_4:50346276-50346295 None:intergenic 50.0%
GCAGCTGAGATTCTGTTCTC+AGG + chr7_4:50346509-50346528 None:intergenic 50.0%
CAATCAGCAATGGTACACGG+CGG - chr7_4:50346556-50346575 Msa1160430:intron 50.0%
TGCTTCTACCTTTCACCCAG+AGG - chr7_4:50346649-50346668 Msa1160430:intron 50.0%
ACCTTTCACCCAGAGGAAAG+TGG - chr7_4:50346656-50346675 Msa1160430:intron 50.0%
CCTTTCACCCAGAGGAAAGT+GGG - chr7_4:50346657-50346676 Msa1160430:intron 50.0%
CTTTCACCCAGAGGAAAGTG+GGG - chr7_4:50346658-50346677 Msa1160430:intron 50.0%
TGGTATCCCCACTTTCCTCT+GGG + chr7_4:50346667-50346686 None:intergenic 50.0%
TTGGTATCCCCACTTTCCTC+TGG + chr7_4:50346668-50346687 None:intergenic 50.0%
GCCTCTGACAGATGACAAAC+TGG - chr7_4:50346704-50346723 Msa1160430:intron 50.0%
GTCACGTCCTTGGATAGTTC+AGG - chr7_4:50346782-50346801 Msa1160430:intron 50.0%
! GTGAGGTGTCCTGAACACAA+AGG - chr7_4:50346903-50346922 Msa1160430:intron 50.0%
TGATCTGATTGCTTTGGCGG+CGG + chr7_4:50346946-50346965 None:intergenic 50.0%
GGGTGATCTGATTGCTTTGG+CGG + chr7_4:50346949-50346968 None:intergenic 50.0%
AGGGTCTTCTACATCATGGC+TGG + chr7_4:50347021-50347040 None:intergenic 50.0%
GTGGAGGGTCTTCTACATCA+TGG + chr7_4:50347025-50347044 None:intergenic 50.0%
!! TTCTAGCTTCTCCCGCTGGA+AGG - chr7_4:50344636-50344655 Msa1160430:CDS 55.0%
TGGTGACCTGGGATCAAACC+TGG - chr7_4:50345063-50345082 Msa1160430:CDS 55.0%
GGTGACCTGGGATCAAACCT+GGG - chr7_4:50345064-50345083 Msa1160430:CDS 55.0%
GGAATCCCAGGTTTGATCCC+AGG + chr7_4:50345072-50345091 None:intergenic 55.0%
! CCGGACCCAATTTCTGAGGA+AGG + chr7_4:50345453-50345472 None:intergenic 55.0%
TCCTCAGAAATTGGGTCCGG+GGG - chr7_4:50345453-50345472 Msa1160430:intron 55.0%
AACTATGCGACGAGGGTCAG+TGG + chr7_4:50345539-50345558 None:intergenic 55.0%
TGACCCTCGTCGCATAGTTG+TGG - chr7_4:50345540-50345559 Msa1160430:intron 55.0%
CAAGACTCCAGCGTTATGGC+AGG - chr7_4:50345593-50345612 Msa1160430:intron 55.0%
CTCCAGCGTTATGGCAGGAA+TGG - chr7_4:50345598-50345617 Msa1160430:intron 55.0%
CTCCATTCCTGCCATAACGC+TGG + chr7_4:50345603-50345622 None:intergenic 55.0%
CCCACTTTCCTCTGGGTGAA+AGG + chr7_4:50346660-50346679 None:intergenic 55.0%
ATGAGTGGCACTACCACCAG+TGG + chr7_4:50346811-50346830 None:intergenic 55.0%
GGTGCCAGGAACATAAAGGG+AGG - chr7_4:50347156-50347175 Msa1160430:five_prime_UTR 55.0%
GGGTAGAAGAAGGCGGTTGA+AGG - chr7_4:50347368-50347387 Msa1160430:intron 55.0%
TACATGGGGAGGGGGAAGTG+TGG - chr7_4:50345043-50345062 Msa1160430:CDS 60.0%
! AGGGGGAAGTGTGGTGACCT+GGG - chr7_4:50345052-50345071 Msa1160430:CDS 60.0%
ACCCCCGGACCCAATTTCTG+AGG + chr7_4:50345457-50345476 None:intergenic 60.0%
ACTCCAAGCTCGTACACCCC+CGG + chr7_4:50345472-50345491 None:intergenic 60.0%
TGCGGAGTGATGTTGGCCGA+TGG - chr7_4:50346846-50346865 Msa1160430:intron 60.0%
! GAGGGGGAAGTGTGGTGACC+TGG - chr7_4:50345051-50345070 Msa1160430:CDS 65.0%
! GGTCCGGGGGTGTACGAGCT+TGG - chr7_4:50345466-50345485 Msa1160430:intron 70.0%
Chromosome Type Strat End Strand Name
chr7_4 gene 50343965 50347629 50343965 ID=Msa1160430;Name=Msa1160430
chr7_4 mRNA 50343965 50347629 50343965 ID=Msa1160430-mRNA-1;Parent=Msa1160430;Name=Msa1160430-mRNA-1;_AED=0.04;_eAED=0.04;_QI=290|1|1|1|0.66|0.5|4|424|382
chr7_4 exon 50343965 50345108 50343965 ID=Msa1160430-mRNA-1:exon:13970;Parent=Msa1160430-mRNA-1
chr7_4 exon 50345862 50346218 50345862 ID=Msa1160430-mRNA-1:exon:13969;Parent=Msa1160430-mRNA-1
chr7_4 exon 50346937 50347199 50346937 ID=Msa1160430-mRNA-1:exon:13968;Parent=Msa1160430-mRNA-1
chr7_4 exon 50347531 50347629 50347531 ID=Msa1160430-mRNA-1:exon:13967;Parent=Msa1160430-mRNA-1
chr7_4 five_prime_UTR 50347531 50347629 50347531 ID=Msa1160430-mRNA-1:five_prime_utr;Parent=Msa1160430-mRNA-1
chr7_4 five_prime_UTR 50347009 50347199 50347009 ID=Msa1160430-mRNA-1:five_prime_utr;Parent=Msa1160430-mRNA-1
chr7_4 CDS 50346937 50347008 50346937 ID=Msa1160430-mRNA-1:cds;Parent=Msa1160430-mRNA-1
chr7_4 CDS 50345862 50346218 50345862 ID=Msa1160430-mRNA-1:cds;Parent=Msa1160430-mRNA-1
chr7_4 CDS 50344389 50345108 50344389 ID=Msa1160430-mRNA-1:cds;Parent=Msa1160430-mRNA-1
chr7_4 three_prime_UTR 50343965 50344388 50343965 ID=Msa1160430-mRNA-1:three_prime_utr;Parent=Msa1160430-mRNA-1
Gene Sequence

>Msa1160430

ATGGTCGTCAACAGATTGAAGCGGGAGCAATGTGACCGAACAAAACATGATTCTAGCTTCTCCCGCTGGAAGATTCTTATTGGTCCTTCTGATTGGGAAGACTATTCCAAAGAAAAGGAAGGATCTACCAGATACAGGATTCACAACCTTCCTCAGAAATTGGGTCCGGGGGTGTACGAGCTTGGAGTAGCTGTGTCGCGTAGTAATCTGGGCCGTGAAATTTACAAGCTTGCCACTGACCCTCGTCGCATAGTTGTGGTTTACCTTGGAAAAGCTGACAATGTGAGAGCAAGACTCCAGCGTTATGGCAGGAATGGAGCTCATTTGAATAACACTTGTATGTCAGATGACTCTTCTCTACGAACGGGAAGGTCATTGTTTCAGGAGATATTTTCACAAGGCTTCCCAATTGTTTATAGATGGGCTCCTATGCAAAACGAGGGAGATGCCCTGAGAACAGAATCTCAGCTGCTTAGTACATTTGATTATGCATGGAACACAATCAGCAATGGTACACGGCGGCCTGATGATATTCTTCAAATGCTCAACAAATTAGCTTCAGGCACTAGAACATTTTCAGATGTGGCCAAATTGCTTCTACCTTTCACCCAGAGGAAAGTGGGGATACCAATTAAATCAAGCAAGCTGCCTCTGACAGATGACAAACTGGATGAAGCTGACAGTGGCAGCTACAACGTCCTATCCCGTGTGTTCAAATTAAACAGGTCACGTCCTTGGATAGTTCAGGATACCACTGGTGGTAGTGCCACTCATGAGAATGCTAAAATTTGCGGAGTGATGTTGGCCGATGGTTCTATTTGTAAAAGGCCACCGGTTGAAAAAAGAGTGAGGTGTCCTGAACACAAAGGAATGAGAATAAATGCGTCCGCCGCCAAAGCAATCAGATCACCCAAGTCAGAATTAGAAAGCATTGTAGGTAATGCTTATAGGTACCAAAATGCCAGCCATGATGTAGAAGACCCTCCACAAAGAATGGTTAAGAGTCATGTTGATGAGGGTATCGCCAAAACCATTATATGTGGAATCATCTTGGATGATGGATCCACTTGTAGAAGACAACCGGTTAAAGGAAGAAAAAGGTGCCAGGAACATAAAGGGAGGAGAATTCGTGCAAATTTGAAAAAATAA
Protein sequence

>Msa1160430

MVVNRLKREQCDRTKHDSSFSRWKILIGPSDWEDYSKEKEGSTRYRIHNLPQKLGPGVYELGVAVSRSNLGREIYKLATDPRRIVVVYLGKADNVRARLQRYGRNGAHLNNTCMSDDSSLRTGRSLFQEIFSQGFPIVYRWAPMQNEGDALRTESQLLSTFDYAWNTISNGTRRPDDILQMLNKLASGTRTFSDVAKLLLPFTQRKVGIPIKSSKLPLTDDKLDEADSGSYNVLSRVFKLNRSRPWIVQDTTGGSATHENAKICGVMLADGSICKRPPVEKRVRCPEHKGMRINASAAKAIRSPKSELESIVGNAYRYQNASHDVEDPPQRMVKSHVDEGIAKTIICGIILDDGSTCRRQPVKGRKRCQEHKGRRIRANLKK*