Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1162700 | XP_024626260.1 | 96.205 | 606 | 17 | 2 | 1 | 605 | 1 | 601 | 0.0 | 1211 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1162700 | sp|Q9FG35|TBR_ARATH | 55.134 | 633 | 228 | 8 | 2 | 605 | 3 | 608 | 0.0 | 664 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1162700 | G7KVF6 | 96.205 | 606 | 17 | 2 | 1 | 605 | 1 | 601 | 0.0 | 1211 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa1035260 | Msa1162700 | 0.804939 | 1.697808e-49 | -8.615850e-47 |
Msa1116470 | Msa1162700 | 0.878539 | 2.587376e-69 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1162700 | MtrunA17_Chr7g0258851 | 96.205 | 606 | 17 | 2 | 1 | 605 | 1 | 601 | 0.0 | 1211 |
Msa1162700 | MtrunA17_Chr1g0175671 | 62.783 | 575 | 134 | 8 | 27 | 594 | 11 | 512 | 0.0 | 711 |
Msa1162700 | MtrunA17_Chr1g0213281 | 62.751 | 349 | 129 | 1 | 252 | 599 | 175 | 523 | 6.02e-173 | 501 |
Msa1162700 | MtrunA17_Chr4g0068111 | 54.472 | 369 | 163 | 4 | 227 | 593 | 90 | 455 | 2.19e-155 | 454 |
Msa1162700 | MtrunA17_Chr5g0413271 | 55.585 | 376 | 153 | 3 | 217 | 592 | 116 | 477 | 5.88e-152 | 446 |
Msa1162700 | MtrunA17_Chr8g0368461 | 57.062 | 354 | 139 | 2 | 251 | 592 | 177 | 529 | 7.26e-150 | 443 |
Msa1162700 | MtrunA17_Chr4g0071391 | 46.194 | 381 | 200 | 2 | 215 | 595 | 75 | 450 | 3.80e-133 | 397 |
Msa1162700 | MtrunA17_Chr7g0269991 | 45.433 | 427 | 210 | 6 | 171 | 595 | 66 | 471 | 6.86e-126 | 379 |
Msa1162700 | MtrunA17_Chr7g0259711 | 44.722 | 360 | 190 | 6 | 252 | 605 | 91 | 447 | 2.29e-102 | 318 |
Msa1162700 | MtrunA17_Chr3g0105301 | 40.571 | 350 | 184 | 7 | 252 | 592 | 43 | 377 | 1.23e-95 | 298 |
Msa1162700 | MtrunA17_Chr2g0287901 | 43.466 | 352 | 184 | 6 | 252 | 595 | 97 | 441 | 2.02e-94 | 297 |
Msa1162700 | MtrunA17_Chr5g0430371 | 40.390 | 359 | 180 | 7 | 252 | 592 | 58 | 400 | 2.21e-94 | 295 |
Msa1162700 | MtrunA17_Chr2g0283581 | 42.274 | 343 | 173 | 6 | 252 | 593 | 42 | 360 | 3.24e-94 | 293 |
Msa1162700 | MtrunA17_Chr1g0171171 | 41.935 | 341 | 181 | 6 | 251 | 591 | 52 | 375 | 1.04e-93 | 293 |
Msa1162700 | MtrunA17_Chr4g0045951 | 40.230 | 348 | 184 | 6 | 247 | 593 | 40 | 364 | 3.18e-91 | 286 |
Msa1162700 | MtrunA17_Chr1g0210771 | 39.247 | 372 | 206 | 7 | 222 | 591 | 29 | 382 | 1.92e-90 | 284 |
Msa1162700 | MtrunA17_Chr2g0325481 | 40.816 | 343 | 178 | 6 | 251 | 592 | 49 | 367 | 3.17e-89 | 281 |
Msa1162700 | MtrunA17_Chr2g0314801 | 41.935 | 341 | 173 | 7 | 251 | 588 | 32 | 350 | 5.24e-87 | 274 |
Msa1162700 | MtrunA17_Chr4g0045941 | 39.650 | 343 | 183 | 6 | 252 | 593 | 33 | 352 | 4.78e-86 | 272 |
Msa1162700 | MtrunA17_Chr3g0085071 | 38.953 | 344 | 182 | 6 | 251 | 591 | 45 | 363 | 1.52e-85 | 271 |
Msa1162700 | MtrunA17_Chr4g0041011 | 40.351 | 342 | 177 | 7 | 252 | 591 | 47 | 363 | 7.60e-85 | 269 |
Msa1162700 | MtrunA17_Chr3g0126021 | 38.503 | 374 | 190 | 9 | 239 | 595 | 113 | 463 | 1.41e-83 | 269 |
Msa1162700 | MtrunA17_Chr2g0314791 | 40.634 | 347 | 171 | 10 | 252 | 592 | 29 | 346 | 7.49e-83 | 263 |
Msa1162700 | MtrunA17_Chr4g0005491 | 38.504 | 361 | 202 | 8 | 247 | 594 | 57 | 410 | 4.59e-82 | 263 |
Msa1162700 | MtrunA17_Chr3g0085081 | 38.012 | 342 | 186 | 6 | 252 | 591 | 31 | 348 | 1.00e-81 | 261 |
Msa1162700 | MtrunA17_Chr3g0091031 | 37.427 | 342 | 188 | 6 | 252 | 591 | 31 | 348 | 2.88e-81 | 259 |
Msa1162700 | MtrunA17_Chr5g0413851 | 38.056 | 360 | 197 | 7 | 235 | 592 | 25 | 360 | 1.63e-80 | 258 |
Msa1162700 | MtrunA17_Chr3g0113671 | 37.216 | 352 | 203 | 7 | 252 | 592 | 106 | 450 | 3.49e-80 | 260 |
Msa1162700 | MtrunA17_Chr8g0384151 | 38.286 | 350 | 191 | 6 | 249 | 592 | 87 | 417 | 1.24e-79 | 258 |
Msa1162700 | MtrunA17_Chr5g0437291 | 36.932 | 352 | 207 | 7 | 252 | 592 | 165 | 512 | 1.64e-79 | 260 |
Msa1162700 | MtrunA17_Chr3g0097891 | 38.192 | 343 | 188 | 7 | 252 | 592 | 31 | 351 | 1.35e-78 | 252 |
Msa1162700 | MtrunA17_Chr7g0243301 | 38.936 | 357 | 194 | 9 | 251 | 592 | 63 | 410 | 3.01e-78 | 253 |
Msa1162700 | MtrunA17_Chr4g0006991 | 37.607 | 351 | 201 | 8 | 251 | 591 | 85 | 427 | 4.23e-78 | 254 |
Msa1162700 | MtrunA17_Chr3g0114101 | 38.202 | 356 | 192 | 9 | 252 | 592 | 89 | 431 | 2.83e-77 | 251 |
Msa1162700 | MtrunA17_Chr4g0005481 | 35.062 | 405 | 241 | 9 | 196 | 588 | 49 | 443 | 1.31e-74 | 245 |
Msa1162700 | MtrunA17_Chr8g0360521 | 35.593 | 354 | 201 | 8 | 252 | 592 | 71 | 410 | 2.75e-74 | 243 |
Msa1162700 | MtrunA17_Chr5g0437601 | 37.815 | 357 | 192 | 9 | 252 | 592 | 83 | 425 | 3.60e-73 | 241 |
Msa1162700 | MtrunA17_Chr7g0242701 | 37.037 | 351 | 203 | 8 | 251 | 591 | 85 | 427 | 2.65e-67 | 225 |
Msa1162700 | MtrunA17_Chr1g0178081 | 34.758 | 351 | 164 | 6 | 252 | 596 | 55 | 346 | 4.62e-64 | 214 |
Msa1162700 | MtrunA17_Chr6g0476041 | 28.514 | 498 | 295 | 16 | 122 | 596 | 59 | 518 | 5.46e-55 | 195 |
Msa1162700 | MtrunA17_Chr1g0188191 | 29.328 | 491 | 270 | 17 | 136 | 597 | 144 | 586 | 1.23e-54 | 195 |
Msa1162700 | MtrunA17_Chr8g0387921 | 32.873 | 362 | 199 | 13 | 251 | 587 | 73 | 415 | 1.14e-52 | 186 |
Msa1162700 | MtrunA17_Chr8g0347321 | 31.389 | 360 | 216 | 11 | 251 | 592 | 94 | 440 | 3.65e-51 | 182 |
Msa1162700 | MtrunA17_Chr1g0209921 | 38.912 | 239 | 128 | 7 | 251 | 486 | 43 | 266 | 1.15e-50 | 176 |
Msa1162700 | MtrunA17_Chr8g0391481 | 34.435 | 363 | 192 | 14 | 251 | 587 | 26 | 368 | 1.19e-48 | 174 |
Msa1162700 | MtrunA17_Chr5g0414051 | 32.804 | 378 | 209 | 14 | 252 | 605 | 75 | 431 | 4.99e-48 | 174 |
Msa1162700 | MtrunA17_Chr3g0140371 | 32.620 | 374 | 206 | 14 | 252 | 601 | 18 | 369 | 1.12e-47 | 171 |
Msa1162700 | MtrunA17_Chr6g0456691 | 31.429 | 385 | 210 | 13 | 248 | 604 | 74 | 432 | 1.53e-47 | 172 |
Msa1162700 | MtrunA17_Chr5g0414091 | 33.333 | 366 | 204 | 13 | 252 | 594 | 85 | 433 | 1.00e-46 | 170 |
Msa1162700 | MtrunA17_Chr5g0414061 | 32.591 | 359 | 203 | 13 | 251 | 587 | 93 | 434 | 5.44e-45 | 166 |
Msa1162700 | MtrunA17_Chr5g0414041 | 33.243 | 370 | 206 | 14 | 252 | 598 | 87 | 438 | 7.96e-45 | 165 |
Msa1162700 | MtrunA17_Chr7g0226991 | 31.967 | 366 | 208 | 14 | 252 | 594 | 57 | 404 | 1.93e-43 | 160 |
Msa1162700 | MtrunA17_Chr6g0456681 | 32.432 | 370 | 195 | 15 | 252 | 591 | 64 | 408 | 2.72e-43 | 160 |
Msa1162700 | MtrunA17_Chr2g0283851 | 30.214 | 374 | 202 | 15 | 253 | 594 | 56 | 402 | 5.58e-42 | 156 |
Msa1162700 | MtrunA17_Chr4g0049421 | 32.022 | 356 | 207 | 15 | 252 | 587 | 48 | 388 | 3.12e-41 | 154 |
Msa1162700 | MtrunA17_Chr4g0070341 | 27.623 | 467 | 280 | 17 | 142 | 591 | 46 | 471 | 1.42e-39 | 151 |
Msa1162700 | MtrunA17_Chr6g0451321 | 30.541 | 370 | 206 | 17 | 252 | 595 | 116 | 460 | 1.58e-39 | 150 |
Msa1162700 | MtrunA17_Chr6g0455901 | 29.620 | 368 | 209 | 15 | 252 | 591 | 71 | 416 | 7.61e-38 | 145 |
Msa1162700 | MtrunA17_Chr8g0384421 | 29.379 | 354 | 222 | 12 | 252 | 591 | 133 | 472 | 8.27e-38 | 146 |
Msa1162700 | MtrunA17_Chr2g0287931 | 46.032 | 126 | 65 | 2 | 312 | 435 | 2 | 126 | 4.23e-29 | 112 |
Msa1162700 | MtrunA17_Chr7g0221271 | 36.250 | 160 | 88 | 2 | 233 | 385 | 53 | 205 | 5.86e-28 | 111 |
Msa1162700 | MtrunA17_Chr7g0221291 | 50.000 | 90 | 45 | 0 | 251 | 340 | 78 | 167 | 2.08e-27 | 108 |
Msa1162700 | MtrunA17_Chr3g0085101 | 43.396 | 106 | 58 | 1 | 449 | 552 | 1 | 106 | 3.95e-25 | 100 |
Msa1162700 | MtrunA17_Chr1g0209931 | 41.000 | 100 | 47 | 2 | 497 | 596 | 10 | 97 | 1.94e-18 | 80.9 |
Msa1162700 | MtrunA17_Chr7g0221281 | 29.218 | 243 | 145 | 9 | 369 | 593 | 5 | 238 | 1.72e-17 | 82.8 |
Msa1162700 | MtrunA17_Chr5g0414081 | 31.937 | 191 | 105 | 8 | 417 | 587 | 10 | 195 | 5.15e-16 | 77.4 |
Msa1162700 | MtrunA17_Chr2g0287911 | 40.789 | 76 | 38 | 1 | 231 | 306 | 40 | 108 | 5.68e-13 | 65.5 |
Msa1162700 | MtrunA17_Chr5g0429191 | 57.778 | 45 | 18 | 1 | 540 | 584 | 2 | 45 | 8.88e-13 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1162700 | AT5G06700.1 | 55.134 | 633 | 228 | 8 | 2 | 605 | 3 | 608 | 0.0 | 664 |
Msa1162700 | AT3G12060.1 | 54.742 | 601 | 197 | 11 | 3 | 594 | 4 | 538 | 0.0 | 632 |
Msa1162700 | AT1G60790.1 | 49.011 | 455 | 219 | 5 | 148 | 592 | 82 | 533 | 2.23e-152 | 449 |
Msa1162700 | AT5G49340.1 | 55.014 | 349 | 155 | 2 | 247 | 593 | 95 | 443 | 1.18e-145 | 429 |
Msa1162700 | AT5G20590.1 | 48.718 | 351 | 177 | 2 | 245 | 594 | 134 | 482 | 5.72e-133 | 398 |
Msa1162700 | AT3G62390.1 | 42.984 | 449 | 225 | 11 | 150 | 594 | 53 | 474 | 3.36e-124 | 375 |
Msa1162700 | AT5G19160.1 | 44.658 | 365 | 188 | 5 | 241 | 595 | 88 | 448 | 5.86e-103 | 320 |
Msa1162700 | AT3G06080.2 | 44.134 | 358 | 189 | 4 | 245 | 595 | 96 | 449 | 3.58e-101 | 315 |
Msa1162700 | AT1G29050.1 | 37.760 | 384 | 209 | 7 | 211 | 593 | 26 | 380 | 4.34e-92 | 289 |
Msa1162700 | AT5G06230.2 | 41.783 | 359 | 193 | 5 | 251 | 599 | 20 | 372 | 8.40e-92 | 288 |
Msa1162700 | AT5G06230.1 | 41.783 | 359 | 193 | 5 | 251 | 599 | 61 | 413 | 1.90e-91 | 288 |
Msa1162700 | AT2G34070.1 | 36.898 | 374 | 211 | 5 | 222 | 593 | 35 | 385 | 3.85e-89 | 281 |
Msa1162700 | AT1G48880.1 | 40.166 | 361 | 181 | 8 | 237 | 587 | 100 | 435 | 5.28e-89 | 283 |
Msa1162700 | AT3G11570.1 | 41.071 | 336 | 188 | 5 | 268 | 599 | 98 | 427 | 4.13e-87 | 278 |
Msa1162700 | AT1G78710.1 | 38.736 | 364 | 191 | 9 | 231 | 592 | 24 | 357 | 4.50e-87 | 275 |
Msa1162700 | AT5G58600.1 | 38.571 | 350 | 192 | 9 | 252 | 592 | 66 | 401 | 2.10e-86 | 275 |
Msa1162700 | AT5G20590.2 | 47.951 | 244 | 126 | 1 | 245 | 487 | 134 | 377 | 1.09e-85 | 272 |
Msa1162700 | AT2G42570.1 | 38.372 | 344 | 186 | 6 | 251 | 592 | 46 | 365 | 4.36e-85 | 270 |
Msa1162700 | AT2G31110.2 | 35.904 | 376 | 217 | 7 | 217 | 591 | 10 | 362 | 5.72e-85 | 270 |
Msa1162700 | AT2G30010.1 | 39.045 | 356 | 188 | 9 | 252 | 592 | 56 | 397 | 7.95e-84 | 268 |
Msa1162700 | AT3G62390.2 | 39.833 | 359 | 192 | 7 | 150 | 505 | 53 | 390 | 1.16e-83 | 268 |
Msa1162700 | AT2G30010.2 | 39.045 | 356 | 188 | 9 | 252 | 592 | 99 | 440 | 1.30e-83 | 269 |
Msa1162700 | AT2G40160.2 | 36.592 | 358 | 206 | 8 | 252 | 595 | 77 | 427 | 1.53e-83 | 269 |
Msa1162700 | AT3G54260.1 | 38.728 | 346 | 186 | 8 | 252 | 592 | 51 | 375 | 1.85e-82 | 264 |
Msa1162700 | AT2G40160.1 | 36.286 | 350 | 202 | 8 | 252 | 587 | 77 | 419 | 4.71e-82 | 264 |
Msa1162700 | AT2G30900.1 | 38.551 | 345 | 187 | 6 | 252 | 592 | 43 | 366 | 2.78e-81 | 260 |
Msa1162700 | AT1G73140.1 | 38.764 | 356 | 198 | 9 | 252 | 598 | 67 | 411 | 1.79e-80 | 259 |
Msa1162700 | AT5G01620.2 | 38.506 | 348 | 194 | 8 | 251 | 588 | 109 | 446 | 7.42e-79 | 256 |
Msa1162700 | AT5G01620.1 | 38.506 | 348 | 194 | 8 | 251 | 588 | 109 | 446 | 7.42e-79 | 256 |
Msa1162700 | AT5G01620.3 | 38.506 | 348 | 194 | 8 | 251 | 588 | 117 | 454 | 1.14e-78 | 256 |
Msa1162700 | AT2G40150.1 | 35.734 | 361 | 208 | 7 | 251 | 594 | 70 | 423 | 3.03e-78 | 254 |
Msa1162700 | AT3G55990.1 | 36.338 | 355 | 208 | 7 | 251 | 594 | 139 | 486 | 1.03e-77 | 255 |
Msa1162700 | AT3G14850.2 | 37.791 | 344 | 191 | 7 | 247 | 588 | 29 | 351 | 6.32e-77 | 248 |
Msa1162700 | AT5G01360.2 | 35.328 | 351 | 210 | 7 | 251 | 591 | 35 | 378 | 2.35e-74 | 243 |
Msa1162700 | AT5G01360.1 | 35.328 | 351 | 210 | 7 | 251 | 591 | 91 | 434 | 6.39e-74 | 243 |
Msa1162700 | AT3G11030.1 | 37.006 | 354 | 200 | 9 | 252 | 592 | 106 | 449 | 2.65e-72 | 239 |
Msa1162700 | AT2G38320.1 | 35.574 | 357 | 206 | 10 | 251 | 592 | 58 | 405 | 3.06e-72 | 238 |
Msa1162700 | AT5G19160.2 | 45.565 | 248 | 134 | 1 | 241 | 487 | 88 | 335 | 3.47e-72 | 236 |
Msa1162700 | AT2G40320.1 | 36.467 | 351 | 205 | 8 | 252 | 592 | 81 | 423 | 1.93e-71 | 236 |
Msa1162700 | AT3G06080.1 | 43.852 | 244 | 136 | 1 | 245 | 487 | 96 | 339 | 1.12e-66 | 221 |
Msa1162700 | AT2G38320.2 | 34.441 | 331 | 194 | 9 | 276 | 592 | 1 | 322 | 2.01e-62 | 209 |
Msa1162700 | AT2G34070.2 | 36.131 | 274 | 150 | 5 | 322 | 593 | 1 | 251 | 3.47e-59 | 198 |
Msa1162700 | AT1G78710.2 | 32.782 | 363 | 161 | 10 | 231 | 592 | 17 | 297 | 2.70e-57 | 195 |
Msa1162700 | AT5G58600.2 | 37.131 | 237 | 134 | 4 | 252 | 486 | 66 | 289 | 3.05e-56 | 192 |
Msa1162700 | AT1G01430.1 | 32.143 | 420 | 248 | 13 | 198 | 595 | 47 | 451 | 8.35e-55 | 193 |
Msa1162700 | AT5G06230.3 | 38.710 | 248 | 145 | 2 | 251 | 491 | 61 | 308 | 1.02e-54 | 188 |
Msa1162700 | AT2G31110.3 | 34.717 | 265 | 160 | 4 | 217 | 481 | 10 | 261 | 2.07e-54 | 186 |
Msa1162700 | AT1G70230.1 | 35.475 | 358 | 193 | 14 | 252 | 594 | 79 | 413 | 4.96e-53 | 187 |
Msa1162700 | AT4G25360.1 | 30.400 | 375 | 214 | 11 | 251 | 597 | 174 | 529 | 4.45e-52 | 187 |
Msa1162700 | AT4G25360.2 | 30.400 | 375 | 214 | 11 | 251 | 597 | 174 | 529 | 4.45e-52 | 187 |
Msa1162700 | AT5G51640.1 | 30.469 | 384 | 219 | 11 | 251 | 605 | 137 | 501 | 8.22e-52 | 186 |
Msa1162700 | AT2G40160.3 | 33.471 | 242 | 148 | 5 | 252 | 487 | 77 | 311 | 1.89e-50 | 177 |
Msa1162700 | AT2G30900.2 | 37.662 | 231 | 131 | 4 | 252 | 481 | 43 | 261 | 3.41e-50 | 175 |
Msa1162700 | AT4G23790.1 | 32.703 | 370 | 202 | 14 | 251 | 592 | 78 | 428 | 7.94e-49 | 176 |
Msa1162700 | AT4G11090.1 | 32.877 | 365 | 196 | 12 | 251 | 587 | 78 | 421 | 4.32e-48 | 174 |
Msa1162700 | AT3G14850.1 | 35.316 | 269 | 151 | 7 | 322 | 588 | 1 | 248 | 9.47e-48 | 168 |
Msa1162700 | AT5G64470.3 | 31.638 | 354 | 217 | 14 | 252 | 593 | 55 | 395 | 1.30e-47 | 172 |
Msa1162700 | AT4G01080.1 | 31.667 | 360 | 216 | 11 | 251 | 595 | 90 | 434 | 3.45e-47 | 172 |
Msa1162700 | AT3G28150.1 | 31.880 | 367 | 209 | 11 | 251 | 597 | 69 | 414 | 8.16e-47 | 170 |
Msa1162700 | AT5G64470.2 | 31.302 | 361 | 215 | 16 | 252 | 593 | 55 | 401 | 1.70e-46 | 169 |
Msa1162700 | AT2G31110.1 | 35.426 | 223 | 127 | 5 | 370 | 591 | 8 | 214 | 3.70e-46 | 162 |
Msa1162700 | AT5G15890.1 | 27.439 | 492 | 287 | 15 | 135 | 587 | 58 | 518 | 8.85e-46 | 170 |
Msa1162700 | AT5G15900.1 | 32.603 | 365 | 206 | 14 | 252 | 595 | 67 | 412 | 3.99e-45 | 166 |
Msa1162700 | AT5G15900.2 | 32.603 | 365 | 206 | 14 | 252 | 595 | 86 | 431 | 5.03e-45 | 166 |
Msa1162700 | AT3G02440.1 | 31.978 | 369 | 207 | 12 | 252 | 597 | 127 | 474 | 1.04e-42 | 160 |
Msa1162700 | AT3G02440.2 | 31.978 | 369 | 207 | 12 | 252 | 597 | 135 | 482 | 1.27e-42 | 160 |
Msa1162700 | AT2G14530.1 | 29.863 | 365 | 211 | 12 | 252 | 591 | 62 | 406 | 3.76e-42 | 157 |
Msa1162700 | AT5G64020.1 | 27.731 | 357 | 236 | 12 | 252 | 591 | 57 | 408 | 3.67e-38 | 146 |
Msa1162700 | AT5G20680.6 | 28.045 | 353 | 228 | 11 | 252 | 591 | 118 | 457 | 8.81e-36 | 140 |
Msa1162700 | AT5G20680.4 | 28.045 | 353 | 228 | 11 | 252 | 591 | 212 | 551 | 1.64e-35 | 141 |
Msa1162700 | AT5G20680.1 | 28.045 | 353 | 228 | 11 | 252 | 591 | 212 | 551 | 1.64e-35 | 141 |
Msa1162700 | AT5G20680.3 | 28.045 | 353 | 228 | 11 | 252 | 591 | 212 | 551 | 1.64e-35 | 141 |
Msa1162700 | AT5G20680.5 | 28.045 | 353 | 228 | 11 | 252 | 591 | 212 | 551 | 1.64e-35 | 141 |
Msa1162700 | AT5G20680.2 | 28.045 | 353 | 228 | 11 | 252 | 591 | 194 | 533 | 1.84e-35 | 140 |
Msa1162700 | AT5G64470.1 | 30.882 | 272 | 171 | 11 | 252 | 513 | 55 | 319 | 2.34e-30 | 122 |
Msa1162700 | AT5G64470.4 | 31.907 | 257 | 158 | 11 | 252 | 498 | 55 | 304 | 3.64e-30 | 121 |
Msa1162700 | AT2G37720.1 | 26.989 | 352 | 233 | 11 | 252 | 591 | 143 | 482 | 4.64e-30 | 124 |
Find 139 sgRNAs with CRISPR-Local
Find 275 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCTTATTCATTTGTATTTA+AGG | 0.026700 | 7_4:-53465674 | Msa1162700:intron |
TGAATATGATGCAGTTATTT+TGG | 0.146183 | 7_4:+53467173 | None:intergenic |
AATCCACACAGCTGAATTTA+TGG | 0.179659 | 7_4:+53463047 | None:intergenic |
GCTATTCTGCTTCCCATTTC+AGG | 0.198403 | 7_4:-53465061 | Msa1162700:intron |
CAAAATTCTATGGGGAAAAT+TGG | 0.211751 | 7_4:-53463253 | Msa1162700:three_prime_UTR |
GAAATCAGCATGCATTTAAA+TGG | 0.235111 | 7_4:-53463076 | Msa1162700:three_prime_UTR |
CATTTGCACTTTACCTGAAA+TGG | 0.238761 | 7_4:+53465048 | None:intergenic |
TGCAGTCATTGGTGCCTTCC+TGG | 0.250995 | 7_4:-53464209 | Msa1162700:CDS |
TCAGAACTCAAATTCTTGTT+AGG | 0.259301 | 7_4:+53466391 | None:intergenic |
GTTGAATACCCAAAATTCTA+TGG | 0.265794 | 7_4:-53463263 | Msa1162700:three_prime_UTR |
AAGATTATCAGAAGTATAAA+TGG | 0.273489 | 7_4:-53466147 | Msa1162700:CDS |
AAGAGGCTTCCCCTCTAAAA+TGG | 0.286161 | 7_4:+53465692 | None:intergenic |
TAAATTCAGCTGTGTGGATT+TGG | 0.290042 | 7_4:-53463044 | Msa1162700:three_prime_UTR |
CTGTCATCCTCGTGATATTC+AGG | 0.292947 | 7_4:+53464318 | None:intergenic |
AAGTTGAACTACTACTTTCA+TGG | 0.298361 | 7_4:-53467055 | Msa1162700:exon |
AGCTTTGGTTTCATCAGAAT+TGG | 0.303560 | 7_4:+53466468 | None:intergenic |
TACTTCTGATAATCTTTATC+AGG | 0.304001 | 7_4:+53466154 | None:intergenic |
CATAGACATGGCTACCTTCT+TGG | 0.307943 | 7_4:+53465186 | None:intergenic |
ATTTGAGTTCTTCATAGCTT+TGG | 0.337985 | 7_4:+53466453 | None:intergenic |
TTCTCCAGCACCCTCATCTT+AGG | 0.338480 | 7_4:+53464374 | None:intergenic |
AAGTCCATAGTCTTGTTTAG+AGG | 0.347400 | 7_4:-53465083 | Msa1162700:CDS |
CTTAAATACAAATGAATAAG+AGG | 0.350601 | 7_4:+53465675 | None:intergenic |
TGCAGTCTTGGAATCTCAAC+GGG | 0.359692 | 7_4:+53464228 | None:intergenic |
TATCAATGGGCGCAGTTTCA+TGG | 0.359918 | 7_4:+53464423 | None:intergenic |
GATATCATTGTCTTCAATAC+TGG | 0.368321 | 7_4:-53465412 | Msa1162700:CDS |
CAACAAATATGCAGAGTTGA+TGG | 0.374691 | 7_4:-53466299 | Msa1162700:CDS |
AACTGATAACGTTTCTTCAT+AGG | 0.377021 | 7_4:+53463283 | None:intergenic |
TTGTTGGTGATTCTCTCAAT+AGG | 0.379512 | 7_4:-53465795 | Msa1162700:CDS |
CAGTTCAATTGTATTAGAAA+TGG | 0.385843 | 7_4:-53466181 | Msa1162700:CDS |
AAATTCTTGTTAGGGATAGT+TGG | 0.386032 | 7_4:+53466400 | None:intergenic |
ATAGCCTCTAAACAAGACTA+TGG | 0.392621 | 7_4:+53465079 | None:intergenic |
TTAGTAGTTCCTACTCCTAT+AGG | 0.393314 | 7_4:+53467012 | None:intergenic |
AGAATTTCATTCCACGCATC+AGG | 0.404868 | 7_4:+53464182 | None:intergenic |
CAGTGGTGGACAATGGAATT+CGG | 0.407795 | 7_4:-53464459 | Msa1162700:CDS |
TCTTAGGCGGGTACTCTGTT+AGG | 0.418648 | 7_4:+53464390 | None:intergenic |
GGCACCAATGACTGCAGTCT+TGG | 0.426478 | 7_4:+53464216 | None:intergenic |
CCCAAGTTGTTATAGCTCTT+CGG | 0.429231 | 7_4:+53465138 | None:intergenic |
AAGAAAGTTTATGAAGCAAA+TGG | 0.436779 | 7_4:-53465721 | Msa1162700:CDS |
AAGTAGTAGTTCAACTTTGA+AGG | 0.438849 | 7_4:+53467061 | None:intergenic |
CACCAACATGTTATTCCAAC+TGG | 0.438938 | 7_4:-53463196 | Msa1162700:three_prime_UTR |
TAGGTACTTCTCGTTATCAA+TGG | 0.440581 | 7_4:+53464409 | None:intergenic |
TCCCACTCTTGAACTAAGAA+TGG | 0.443337 | 7_4:+53465517 | None:intergenic |
TAGTTATCGTTAAATGATTG+TGG | 0.446553 | 7_4:-53463135 | Msa1162700:three_prime_UTR |
CTCATGATAAAACTTCTAAA+GGG | 0.448781 | 7_4:-53465378 | Msa1162700:intron |
CTTGGAAGGCTGCAACCCTT+AGG | 0.453939 | 7_4:+53466121 | None:intergenic |
GATTCCAAGACTGCAGTCAT+TGG | 0.456998 | 7_4:-53464220 | Msa1162700:CDS |
ACTCATGATAAAACTTCTAA+AGG | 0.457588 | 7_4:-53465379 | Msa1162700:CDS |
CAGAACTCAAATTCTTGTTA+GGG | 0.463399 | 7_4:+53466392 | None:intergenic |
ACAGGAACAGGAACAGGAAC+AGG | 0.465117 | 7_4:+53466586 | None:intergenic |
ACAACCAAGTATGTTCCTAT+AGG | 0.469081 | 7_4:-53467027 | Msa1162700:CDS |
AGGTACTTCTCGTTATCAAT+GGG | 0.469131 | 7_4:+53464410 | None:intergenic |
ATTTGCACTTTACCTGAAAT+GGG | 0.470384 | 7_4:+53465049 | None:intergenic |
TGTGGGGTGGGTATAATGTT+TGG | 0.473505 | 7_4:+53467240 | None:intergenic |
TTTGTTGAGAGGCAAGAGAT+TGG | 0.476914 | 7_4:-53465821 | Msa1162700:CDS |
TGATAGATTGAGAAATAAGA+AGG | 0.477271 | 7_4:+53467389 | None:intergenic |
GAAGTATAAATGGAAACCTA+AGG | 0.478515 | 7_4:-53466137 | Msa1162700:CDS |
ATTACACTGCTTCACTTGCT+AGG | 0.478858 | 7_4:-53466339 | Msa1162700:CDS |
ACATGTTATTCCAACTGGTA+AGG | 0.478980 | 7_4:-53463191 | Msa1162700:three_prime_UTR |
ATTCTCTCAATAGGAATATG+TGG | 0.479362 | 7_4:-53465786 | Msa1162700:CDS |
TTGAATACCCAAAATTCTAT+GGG | 0.481851 | 7_4:-53463262 | Msa1162700:three_prime_UTR |
ACGGTCACCCCTCGATATAC+CGG | 0.482085 | 7_4:-53464283 | Msa1162700:CDS |
CACAATCTGTGAAGTGGTGT+TGG | 0.482346 | 7_4:+53466525 | None:intergenic |
CAAGAACCTGGTTTATAAAG+AGG | 0.488101 | 7_4:+53466220 | None:intergenic |
GTGATATTCAGGTAGGATAC+AGG | 0.492374 | 7_4:+53464329 | None:intergenic |
GGTGTTGTGGTGGAAATTGT+TGG | 0.495635 | 7_4:+53466844 | None:intergenic |
AGTTCTGATTCTTCATTGAA+AGG | 0.499613 | 7_4:-53466376 | Msa1162700:CDS |
CATGTTATTCCAACTGGTAA+GGG | 0.500979 | 7_4:-53463190 | Msa1162700:three_prime_UTR |
TCCGAAGAGCTATAACAACT+TGG | 0.501825 | 7_4:-53465139 | Msa1162700:CDS |
ACACTTCGTCTTGATTTAGT+TGG | 0.505333 | 7_4:-53465463 | Msa1162700:CDS |
AAATGATGAAGATGAGAGAT+GGG | 0.509701 | 7_4:+53467100 | None:intergenic |
TACTCCTATAGGAACATACT+TGG | 0.509826 | 7_4:+53467023 | None:intergenic |
CTATAACAACTTGGGGTAGG+TGG | 0.511798 | 7_4:-53465130 | Msa1162700:CDS |
GTGTGATTTGTGACTAAAGA+TGG | 0.513286 | 7_4:+53466493 | None:intergenic |
AATTGAGAAGTAGAAGAAGA+AGG | 0.518373 | 7_4:+53466823 | None:intergenic |
CCGAAGAGCTATAACAACTT+GGG | 0.520685 | 7_4:-53465138 | Msa1162700:CDS |
AACAAGACTATGGACTTGGT+TGG | 0.522372 | 7_4:+53465089 | None:intergenic |
CCCGCCTAAGATGAGGGTGC+TGG | 0.524275 | 7_4:-53464378 | Msa1162700:CDS |
CAAATGTGTGGAAAGAGAAT+GGG | 0.526768 | 7_4:+53467343 | None:intergenic |
AGTAGTAGTTCAACTTTGAA+GGG | 0.527072 | 7_4:+53467062 | None:intergenic |
AGAGAGGGAACATTTGTTTG+CGG | 0.528690 | 7_4:+53467416 | None:intergenic |
GCATCAGCAGAAGAGATCCT+AGG | 0.529120 | 7_4:-53464123 | Msa1162700:intron |
CTAAGGGTTGCAGCCTTCCA+AGG | 0.532158 | 7_4:-53466120 | Msa1162700:intron |
TCAAATGTGTGGAAAGAGAA+TGG | 0.532349 | 7_4:+53467342 | None:intergenic |
AGTGGTGGACAATGGAATTC+GGG | 0.533025 | 7_4:-53464458 | Msa1162700:CDS |
AAATGCATGCTGATTTCGAA+AGG | 0.534032 | 7_4:+53463082 | None:intergenic |
TCTTATCCTCTTTATAAACC+AGG | 0.534497 | 7_4:-53466226 | Msa1162700:CDS |
AGATTGAGAAATAAGAAGGA+AGG | 0.534927 | 7_4:+53467393 | None:intergenic |
TATCTATCGGAGAATCTGTT+AGG | 0.535704 | 7_4:+53463159 | None:intergenic |
AAATAAGAAGGAAGGAGAGA+GGG | 0.537311 | 7_4:+53467401 | None:intergenic |
GAAATAAGAAGGAAGGAGAG+AGG | 0.538217 | 7_4:+53467400 | None:intergenic |
GAAATGATGAAGATGAGAGA+TGG | 0.540754 | 7_4:+53467099 | None:intergenic |
TCTTCTGCTGATGCTTATCT+CGG | 0.542278 | 7_4:+53464132 | None:intergenic |
TCCAGCACCCTCATCTTAGG+CGG | 0.543139 | 7_4:+53464377 | None:intergenic |
TTTAATGCAGTGGTGGACAA+TGG | 0.545585 | 7_4:-53464466 | Msa1162700:intron |
AGAAGAAGAAGGTGTTGTGG+TGG | 0.546115 | 7_4:+53466834 | None:intergenic |
CACCATTCTTAGTTCAAGAG+TGG | 0.548350 | 7_4:-53465519 | Msa1162700:CDS |
AGGAAGGACTATTACCAAGA+AGG | 0.548521 | 7_4:-53465200 | Msa1162700:CDS |
AGAATGCTTGATTTGTTGAG+AGG | 0.553381 | 7_4:-53465832 | Msa1162700:CDS |
GCGCACAATCCCTTACCAGT+TGG | 0.561327 | 7_4:+53463181 | None:intergenic |
ACCATTCTTAGTTCAAGAGT+GGG | 0.562123 | 7_4:-53465518 | Msa1162700:CDS |
ACAGAATTGGATACCTTGGA+AGG | 0.564594 | 7_4:+53466107 | None:intergenic |
GGAACTACTAATAATACTAC+TGG | 0.564960 | 7_4:-53467000 | Msa1162700:CDS |
TCAATTATTGAACAAGAACC+TGG | 0.565676 | 7_4:+53466208 | None:intergenic |
ATGAGATTGAGAAGTTGCAT+TGG | 0.566578 | 7_4:+53466681 | None:intergenic |
TTCCTGGTGTTCCTGATGCG+TGG | 0.566916 | 7_4:-53464193 | Msa1162700:CDS |
TTGTCTTCAATACTGGCCAC+TGG | 0.567532 | 7_4:-53465405 | Msa1162700:CDS |
TAACGATAACTAATATCTAT+CGG | 0.568555 | 7_4:+53463146 | None:intergenic |
GAGCTATAACAACTTGGGGT+AGG | 0.571905 | 7_4:-53465133 | Msa1162700:CDS |
CCAGCACCCTCATCTTAGGC+GGG | 0.574801 | 7_4:+53464378 | None:intergenic |
CTGCAGTCTTGGAATCTCAA+CGG | 0.582121 | 7_4:+53464227 | None:intergenic |
GACAAAGATAGAAAATGAAG+TGG | 0.582327 | 7_4:+53467134 | None:intergenic |
CAGAGTACCCGCCTAAGATG+AGG | 0.590274 | 7_4:-53464385 | Msa1162700:CDS |
AGTAGAAGAAGAAGGTGTTG+TGG | 0.595942 | 7_4:+53466831 | None:intergenic |
AAGTATGTTCCTATAGGAGT+AGG | 0.596005 | 7_4:-53467021 | Msa1162700:CDS |
TATAACAACTTGGGGTAGGT+GGG | 0.598986 | 7_4:-53465129 | Msa1162700:CDS |
AGAGTACCCGCCTAAGATGA+GGG | 0.602147 | 7_4:-53464384 | Msa1162700:CDS |
AAGTATAAATGGAAACCTAA+GGG | 0.602347 | 7_4:-53466136 | Msa1162700:CDS |
TCTAAACAAGACTATGGACT+TGG | 0.603081 | 7_4:+53465085 | None:intergenic |
TCTTCAATACTGGCCACTGG+TGG | 0.603633 | 7_4:-53465402 | Msa1162700:CDS |
CATCCTCGTGATATTCAGGT+AGG | 0.603802 | 7_4:+53464322 | None:intergenic |
TTCTCTCAATAGGAATATGT+GGG | 0.605396 | 7_4:-53465785 | Msa1162700:CDS |
TACCAGTTGGAATAACATGT+TGG | 0.611783 | 7_4:+53463194 | None:intergenic |
CGAAGAGCTATAACAACTTG+GGG | 0.615761 | 7_4:-53465137 | Msa1162700:CDS |
GTGGTGGAAATTGTTGGAGA+AGG | 0.616261 | 7_4:+53466850 | None:intergenic |
CATTCAATTCATCATAGACA+TGG | 0.618288 | 7_4:+53465174 | None:intergenic |
TTCCACGCATCAGGAACACC+AGG | 0.632725 | 7_4:+53464191 | None:intergenic |
TGATGAATTGAATGTTCTTG+AGG | 0.633161 | 7_4:-53465165 | Msa1162700:CDS |
GTAGGATTATAAATTCTCTG+TGG | 0.636747 | 7_4:-53465554 | Msa1162700:intron |
CTTGCTAGGAAACAGAACAA+TGG | 0.648916 | 7_4:-53466325 | Msa1162700:CDS |
AAAAGGATGAACAAGATCAG+TGG | 0.649933 | 7_4:+53466741 | None:intergenic |
ACTACTAATAATACTACTGG+TGG | 0.655033 | 7_4:-53466997 | Msa1162700:CDS |
GGTGGACAATGGAATTCGGG+TGG | 0.657454 | 7_4:-53464455 | Msa1162700:CDS |
AAGACTTTGAGTCAAATGTG+TGG | 0.662090 | 7_4:+53467331 | None:intergenic |
ACGCATCAGGAACACCAGGA+AGG | 0.667233 | 7_4:+53464195 | None:intergenic |
TTTGCTTCCGGTATATCGAG+GGG | 0.679052 | 7_4:+53464276 | None:intergenic |
GTGCCATAAATTCAGCTGTG+TGG | 0.681418 | 7_4:-53463050 | Msa1162700:three_prime_UTR |
TGAATACCCAAAATTCTATG+GGG | 0.701058 | 7_4:-53463261 | Msa1162700:three_prime_UTR |
TATCCTACCTGAATATCACG+AGG | 0.721350 | 7_4:-53464325 | Msa1162700:CDS |
GCAGTCTTGGAATCTCAACG+GGG | 0.793976 | 7_4:+53464229 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATAATTTTTTCATTTGTGTT+TGG | + | chr7_4:53463791-53463810 | None:intergenic | 15.0% |
!!! | TAAAATTTGTTTAACAGAAT+TGG | + | chr7_4:53464352-53464371 | None:intergenic | 15.0% |
!!! | TAATTTTCATAGGTTAATTT+TGG | - | chr7_4:53464487-53464506 | Msa1162700:intron | 15.0% |
!!! | ATTTTGTAGTTTACTATAAT+TGG | - | chr7_4:53464524-53464543 | Msa1162700:intron | 15.0% |
!!! | TTTTGTAGTTTACTATAATT+GGG | - | chr7_4:53464525-53464544 | Msa1162700:intron | 15.0% |
!!! | TTTTAAGAAAAATAGGAAAA+AGG | + | chr7_4:53466446-53466465 | None:intergenic | 15.0% |
!!! | TTTCCTATTTTTCTTAAAAA+AGG | - | chr7_4:53466447-53466466 | Msa1162700:CDS | 15.0% |
!!! | TAACCTTTTTTAAGAAAAAT+AGG | + | chr7_4:53466453-53466472 | None:intergenic | 15.0% |
!! | ATATATATAATTAAGAGATG+TGG | - | chr7_4:53466491-53466510 | Msa1162700:CDS | 15.0% |
!! | AAAAATACAGACAAAATAAT+CGG | + | chr7_4:53466966-53466985 | None:intergenic | 15.0% |
!!! | TATCCATTTTTATAGATTTT+TGG | - | chr7_4:53467043-53467062 | Msa1162700:exon | 15.0% |
!!! | ATCCATTTTTATAGATTTTT+GGG | - | chr7_4:53467044-53467063 | Msa1162700:exon | 15.0% |
!!! | TGGAAAAAAGTATGAAAAAA+TGG | + | chr7_4:53463651-53463670 | None:intergenic | 20.0% |
!!! | TTATTTTGAAATGGATCAAA+AGG | + | chr7_4:53463722-53463741 | None:intergenic | 20.0% |
!!! | ATAGAAGTGTTATTTTGAAA+TGG | + | chr7_4:53463731-53463750 | None:intergenic | 20.0% |
!!! | AAGATTATCAGAAGTATAAA+TGG | - | chr7_4:53464296-53464315 | Msa1162700:CDS | 20.0% |
!!! | TGGTTTTTCTTAATTTTCAT+AGG | - | chr7_4:53464477-53464496 | Msa1162700:intron | 20.0% |
!! | CTTAAATACAAATGAATAAG+AGG | + | chr7_4:53464771-53464790 | None:intergenic | 20.0% |
!! | CTCTTATTCATTTGTATTTA+AGG | - | chr7_4:53464769-53464788 | Msa1162700:intron | 20.0% |
!! | CTTAATTAACATTCATAACA+AGG | + | chr7_4:53465205-53465224 | None:intergenic | 20.0% |
!! | TTATGAATGTTAATTAAGTC+TGG | - | chr7_4:53465207-53465226 | Msa1162700:intron | 20.0% |
!!! | ATAAGATTTTGTTCACAATT+CGG | + | chr7_4:53465627-53465646 | None:intergenic | 20.0% |
!!! | ATGTTTTTATAGTATATCAC+TGG | + | chr7_4:53465700-53465719 | None:intergenic | 20.0% |
!! | ATCAAAATGACAAATAAAAG+TGG | - | chr7_4:53465776-53465795 | Msa1162700:CDS | 20.0% |
!!! | AAAGGCATTTTTTTTTTGTA+TGG | + | chr7_4:53466428-53466447 | None:intergenic | 20.0% |
!!! | TTTTTCTTCCTTTTGTTTAA+AGG | - | chr7_4:53466739-53466758 | Msa1162700:CDS | 20.0% |
!! | TAACGATAACTAATATCTAT+CGG | + | chr7_4:53467300-53467319 | None:intergenic | 20.0% |
! | TGATAGATTGAGAAATAAGA+AGG | + | chr7_4:53463057-53463076 | None:intergenic | 25.0% |
!! | TGAATATGATGCAGTTATTT+TGG | + | chr7_4:53463273-53463292 | None:intergenic | 25.0% |
!!! | AGTAGTTTTAGTTTTGAGAA+TGG | + | chr7_4:53463510-53463529 | None:intergenic | 25.0% |
! | GTTATTTAGTTGTGAAAAAG+TGG | + | chr7_4:53463681-53463700 | None:intergenic | 25.0% |
!!! | ATTGAAGTATTGTTTTTGCT+TGG | + | chr7_4:53463896-53463915 | None:intergenic | 25.0% |
!!! | ATGAAGTGTGATTTTTTTGA+TGG | - | chr7_4:53464175-53464194 | Msa1162700:CDS | 25.0% |
!!! | TGATTTTTTTGATGGAGAAT+GGG | - | chr7_4:53464183-53464202 | Msa1162700:CDS | 25.0% |
! | CAGTTCAATTGTATTAGAAA+TGG | - | chr7_4:53464262-53464281 | Msa1162700:CDS | 25.0% |
! | TACTTCTGATAATCTTTATC+AGG | + | chr7_4:53464292-53464311 | None:intergenic | 25.0% |
! | AAGTATAAATGGAAACCTAA+GGG | - | chr7_4:53464307-53464326 | Msa1162700:CDS | 25.0% |
!!! | AAGATTTGTCTTATTTGTGT+TGG | - | chr7_4:53464457-53464476 | Msa1162700:CDS | 25.0% |
!! | TTTTCATAGGTTAATTTTGG+AGG | - | chr7_4:53464490-53464509 | Msa1162700:intron | 25.0% |
! | AAGAAAGTTTATGAAGCAAA+TGG | - | chr7_4:53464722-53464741 | Msa1162700:intron | 25.0% |
!! | TACTCTTTTCCTAATGATAT+TGG | - | chr7_4:53464840-53464859 | Msa1162700:intron | 25.0% |
!! | TCCTAATGATATTGGTTATT+TGG | - | chr7_4:53464848-53464867 | Msa1162700:intron | 25.0% |
! | ACCAAATAACCAATATCATT+AGG | + | chr7_4:53464852-53464871 | None:intergenic | 25.0% |
!! | ATGATATTGGTTATTTGGTT+TGG | - | chr7_4:53464853-53464872 | Msa1162700:intron | 25.0% |
! | ACTCATGATAAAACTTCTAA+AGG | - | chr7_4:53465064-53465083 | Msa1162700:CDS | 25.0% |
! | CTCATGATAAAACTTCTAAA+GGG | - | chr7_4:53465065-53465084 | Msa1162700:CDS | 25.0% |
! | TTGCATATGACATATCATAT+CGG | + | chr7_4:53465726-53465745 | None:intergenic | 25.0% |
! | AAATGACAAATAAAAGTGGT+TGG | - | chr7_4:53465780-53465799 | Msa1162700:CDS | 25.0% |
! | CTGCATTAAAATAAAAACGA+TGG | + | chr7_4:53465967-53465986 | None:intergenic | 25.0% |
!!! | TCGTTTTTATTTTAATGCAG+TGG | - | chr7_4:53465967-53465986 | Msa1162700:intron | 25.0% |
!!! | TTTTTATTTTAATGCAGTGG+TGG | - | chr7_4:53465970-53465989 | Msa1162700:intron | 25.0% |
! | TTGGATATAATGTATAAGTG+AGG | + | chr7_4:53466370-53466389 | None:intergenic | 25.0% |
! | GAAAATGAAGATACAAAACA+AGG | + | chr7_4:53466576-53466595 | None:intergenic | 25.0% |
! | ATTGTAAATCTCTAATCAAC+TGG | - | chr7_4:53466621-53466640 | Msa1162700:CDS | 25.0% |
! | GACCCAAAAATCTATAAAAA+TGG | + | chr7_4:53467049-53467068 | None:intergenic | 25.0% |
! | GCAATATACTATCAAAAGAT+AGG | + | chr7_4:53467071-53467090 | None:intergenic | 25.0% |
! | TTGAATACCCAAAATTCTAT+GGG | - | chr7_4:53467181-53467200 | Msa1162700:five_prime_UTR | 25.0% |
!! | AATTTTCCCCATAGAATTTT+GGG | + | chr7_4:53467191-53467210 | None:intergenic | 25.0% |
! | TAGTTATCGTTAAATGATTG+TGG | - | chr7_4:53467308-53467327 | Msa1162700:five_prime_UTR | 25.0% |
AGATTGAGAAATAAGAAGGA+AGG | + | chr7_4:53463053-53463072 | None:intergenic | 30.0% | |
AAGAGAACAAAAAATGTGTG+GGG | + | chr7_4:53463222-53463241 | None:intergenic | 30.0% | |
GAAGAGAACAAAAAATGTGT+GGG | + | chr7_4:53463223-53463242 | None:intergenic | 30.0% | |
AGAAGAGAACAAAAAATGTG+TGG | + | chr7_4:53463224-53463243 | None:intergenic | 30.0% | |
GACAAAGATAGAAAATGAAG+TGG | + | chr7_4:53463312-53463331 | None:intergenic | 30.0% | |
AAATGATGAAGATGAGAGAT+GGG | + | chr7_4:53463346-53463365 | None:intergenic | 30.0% | |
AGTAGTAGTTCAACTTTGAA+GGG | + | chr7_4:53463384-53463403 | None:intergenic | 30.0% | |
AAGTAGTAGTTCAACTTTGA+AGG | + | chr7_4:53463385-53463404 | None:intergenic | 30.0% | |
AAGTTGAACTACTACTTTCA+TGG | - | chr7_4:53463388-53463407 | Msa1162700:intron | 30.0% | |
GGAACTACTAATAATACTAC+TGG | - | chr7_4:53463443-53463462 | Msa1162700:intron | 30.0% | |
ACTACTAATAATACTACTGG+TGG | - | chr7_4:53463446-53463465 | Msa1162700:intron | 30.0% | |
AATTGAGAAGTAGAAGAAGA+AGG | + | chr7_4:53463623-53463642 | None:intergenic | 30.0% | |
ATTTAGTTGTGAAAAAGTGG+TGG | + | chr7_4:53463678-53463697 | None:intergenic | 30.0% | |
!!! | GTATTGTTTTTGCTTGGAAT+TGG | + | chr7_4:53463890-53463909 | None:intergenic | 30.0% |
! | ATTTGAGTTCTTCATAGCTT+TGG | + | chr7_4:53463993-53464012 | None:intergenic | 30.0% |
AAATTCTTGTTAGGGATAGT+TGG | + | chr7_4:53464046-53464065 | None:intergenic | 30.0% | |
CAGAACTCAAATTCTTGTTA+GGG | + | chr7_4:53464054-53464073 | None:intergenic | 30.0% | |
TCAGAACTCAAATTCTTGTT+AGG | + | chr7_4:53464055-53464074 | None:intergenic | 30.0% | |
! | AGTTCTGATTCTTCATTGAA+AGG | - | chr7_4:53464067-53464086 | Msa1162700:intron | 30.0% |
!!! | GTGATTTTTTTGATGGAGAA+TGG | - | chr7_4:53464182-53464201 | Msa1162700:CDS | 30.0% |
TCTTATCCTCTTTATAAACC+AGG | - | chr7_4:53464217-53464236 | Msa1162700:CDS | 30.0% | |
TCAATTATTGAACAAGAACC+TGG | + | chr7_4:53464238-53464257 | None:intergenic | 30.0% | |
GAAGTATAAATGGAAACCTA+AGG | - | chr7_4:53464306-53464325 | Msa1162700:CDS | 30.0% | |
TTTAACAGAATTGGATACCT+TGG | + | chr7_4:53464343-53464362 | None:intergenic | 30.0% | |
!! | CTTGTTTGTTTTCTAGATGA+TGG | - | chr7_4:53464408-53464427 | Msa1162700:CDS | 30.0% |
!!! | AGATGATGGATGTTTTTGTT+TGG | - | chr7_4:53464422-53464441 | Msa1162700:CDS | 30.0% |
ATTCTCTCAATAGGAATATG+TGG | - | chr7_4:53464657-53464676 | Msa1162700:intron | 30.0% | |
TTCTCTCAATAGGAATATGT+GGG | - | chr7_4:53464658-53464677 | Msa1162700:intron | 30.0% | |
!! | GTTATTTGGTTTGGTATCAA+TGG | - | chr7_4:53464862-53464881 | Msa1162700:intron | 30.0% |
!!! | TTTGGTATCAATGGTTTTGT+AGG | - | chr7_4:53464871-53464890 | Msa1162700:intron | 30.0% |
GTAGGATTATAAATTCTCTG+TGG | - | chr7_4:53464889-53464908 | Msa1162700:intron | 30.0% | |
!! | TTCTTTGTCCCATTTTTATC+TGG | + | chr7_4:53464956-53464975 | None:intergenic | 30.0% |
AGATAAAAATGGGACAAAGA+AGG | - | chr7_4:53464955-53464974 | Msa1162700:intron | 30.0% | |
GATATCATTGTCTTCAATAC+TGG | - | chr7_4:53465031-53465050 | Msa1162700:intron | 30.0% | |
TGATAGCAAATTTGCAATTG+AGG | - | chr7_4:53465105-53465124 | Msa1162700:CDS | 30.0% | |
CATTCAATTCATCATAGACA+TGG | + | chr7_4:53465272-53465291 | None:intergenic | 30.0% | |
TGATGAATTGAATGTTCTTG+AGG | - | chr7_4:53465278-53465297 | Msa1162700:intron | 30.0% | |
ATTTGCACTTTACCTGAAAT+GGG | + | chr7_4:53465397-53465416 | None:intergenic | 30.0% | |
! | TCAGTAACTCATACTTCTTT+TGG | - | chr7_4:53465420-53465439 | Msa1162700:CDS | 30.0% |
GGTTTCACATTCATTACTAT+TGG | - | chr7_4:53465441-53465460 | Msa1162700:CDS | 30.0% | |
! | CATTCATTACTATTGGTTGT+TGG | - | chr7_4:53465448-53465467 | Msa1162700:CDS | 30.0% |
AAGAAATGCATTCTCATCTT+GGG | + | chr7_4:53465490-53465509 | None:intergenic | 30.0% | |
!! | GATCTTCTTTGTTTCTATCT+TGG | - | chr7_4:53465558-53465577 | Msa1162700:intron | 30.0% |
!! | GTTGTCATGCATTTATTTTC+TGG | + | chr7_4:53465878-53465897 | None:intergenic | 30.0% |
AAATGCATGACAACTCTTAT+TGG | - | chr7_4:53465884-53465903 | Msa1162700:intron | 30.0% | |
!! | TTTTTGGTAGTTCATTACCT+AGG | + | chr7_4:53466340-53466359 | None:intergenic | 30.0% |
GATATAATGTATAAGTGAGG+TGG | + | chr7_4:53466367-53466386 | None:intergenic | 30.0% | |
CTATTTCAACTTGAACTGAT+TGG | + | chr7_4:53466389-53466408 | None:intergenic | 30.0% | |
! | TCTGTCTCGAGTTAATTTTT+CGG | - | chr7_4:53466694-53466713 | Msa1162700:CDS | 30.0% |
TACATTGAAATGCACTTATC+TGG | + | chr7_4:53466787-53466806 | None:intergenic | 30.0% | |
CATTTCAATGTATCCTATGT+GGG | - | chr7_4:53466795-53466814 | Msa1162700:CDS | 30.0% | |
!! | GTGGTTTTTATCTGTTTTGA+AGG | - | chr7_4:53466847-53466866 | Msa1162700:CDS | 30.0% |
TTTGCAGACAGTTAATTACA+TGG | + | chr7_4:53466879-53466898 | None:intergenic | 30.0% | |
AACTGTCTGCAAATTCAATA+AGG | - | chr7_4:53466886-53466905 | Msa1162700:CDS | 30.0% | |
AAACGTAATTCGCGATATTA+CGG | + | chr7_4:53466990-53467009 | None:intergenic | 30.0% | |
! | AACTGATAACGTTTCTTCAT+AGG | + | chr7_4:53467163-53467182 | None:intergenic | 30.0% |
GTTGAATACCCAAAATTCTA+TGG | - | chr7_4:53467180-53467199 | Msa1162700:five_prime_UTR | 30.0% | |
TGAATACCCAAAATTCTATG+GGG | - | chr7_4:53467182-53467201 | Msa1162700:five_prime_UTR | 30.0% | |
! | CAATTTTCCCCATAGAATTT+TGG | + | chr7_4:53467192-53467211 | None:intergenic | 30.0% |
CAAAATTCTATGGGGAAAAT+TGG | - | chr7_4:53467190-53467209 | Msa1162700:five_prime_UTR | 30.0% | |
GAAATCAGCATGCATTTAAA+TGG | - | chr7_4:53467367-53467386 | Msa1162700:five_prime_UTR | 30.0% | |
AAATAAGAAGGAAGGAGAGA+GGG | + | chr7_4:53463045-53463064 | None:intergenic | 35.0% | |
CAAATGTGTGGAAAGAGAAT+GGG | + | chr7_4:53463103-53463122 | None:intergenic | 35.0% | |
TCAAATGTGTGGAAAGAGAA+TGG | + | chr7_4:53463104-53463123 | None:intergenic | 35.0% | |
AAGACTTTGAGTCAAATGTG+TGG | + | chr7_4:53463115-53463134 | None:intergenic | 35.0% | |
GAAATGATGAAGATGAGAGA+TGG | + | chr7_4:53463347-53463366 | None:intergenic | 35.0% | |
ACAACCAAGTATGTTCCTAT+AGG | - | chr7_4:53463416-53463435 | Msa1162700:intron | 35.0% | |
TACTCCTATAGGAACATACT+TGG | + | chr7_4:53463423-53463442 | None:intergenic | 35.0% | |
AAGTATGTTCCTATAGGAGT+AGG | - | chr7_4:53463422-53463441 | Msa1162700:intron | 35.0% | |
TTAGTAGTTCCTACTCCTAT+AGG | + | chr7_4:53463434-53463453 | None:intergenic | 35.0% | |
TGTGAAAAAGTGGTGGTATT+TGG | + | chr7_4:53463671-53463690 | None:intergenic | 35.0% | |
AAAAGGATGAACAAGATCAG+TGG | + | chr7_4:53463705-53463724 | None:intergenic | 35.0% | |
ATGAGATTGAGAAGTTGCAT+TGG | + | chr7_4:53463765-53463784 | None:intergenic | 35.0% | |
!! | CTTTTTCACAATCTGTGAAG+TGG | + | chr7_4:53463927-53463946 | None:intergenic | 35.0% |
! | GTGTGATTTGTGACTAAAGA+TGG | + | chr7_4:53463953-53463972 | None:intergenic | 35.0% |
! | AGCTTTGGTTTCATCAGAAT+TGG | + | chr7_4:53463978-53463997 | None:intergenic | 35.0% |
CAACAAATATGCAGAGTTGA+TGG | - | chr7_4:53464144-53464163 | Msa1162700:CDS | 35.0% | |
CAAGAACCTGGTTTATAAAG+AGG | + | chr7_4:53464226-53464245 | None:intergenic | 35.0% | |
! | TTGTTGTGTTGCTCATAGAT+TGG | - | chr7_4:53464580-53464599 | Msa1162700:intron | 35.0% |
!! | AGAATGCTTGATTTGTTGAG+AGG | - | chr7_4:53464611-53464630 | Msa1162700:intron | 35.0% |
!! | TTGTTGGTGATTCTCTCAAT+AGG | - | chr7_4:53464648-53464667 | Msa1162700:intron | 35.0% |
! | AATGGAAGAGTCCATTTTAG+AGG | - | chr7_4:53464740-53464759 | Msa1162700:intron | 35.0% |
! | ATGGAAGAGTCCATTTTAGA+GGG | - | chr7_4:53464741-53464760 | Msa1162700:intron | 35.0% |
ACCATTCTTAGTTCAAGAGT+GGG | - | chr7_4:53464925-53464944 | Msa1162700:intron | 35.0% | |
TGGGAAATGCCAGATAAAAA+TGG | - | chr7_4:53464944-53464963 | Msa1162700:intron | 35.0% | |
GGGAAATGCCAGATAAAAAT+GGG | - | chr7_4:53464945-53464964 | Msa1162700:intron | 35.0% | |
ACACTTCGTCTTGATTTAGT+TGG | - | chr7_4:53464980-53464999 | Msa1162700:intron | 35.0% | |
! | TGAGGCTCATTTTCTGTTTA+TGG | - | chr7_4:53465123-53465142 | Msa1162700:CDS | 35.0% |
! | AGTCTGGTGTGAATATTTTC+AGG | - | chr7_4:53465223-53465242 | Msa1162700:intron | 35.0% |
!! | TGGTGTGAATATTTTCAGGA+AGG | - | chr7_4:53465227-53465246 | Msa1162700:intron | 35.0% |
TCTAAACAAGACTATGGACT+TGG | + | chr7_4:53465361-53465380 | None:intergenic | 35.0% | |
!! | AAGTCCATAGTCTTGTTTAG+AGG | - | chr7_4:53465360-53465379 | Msa1162700:intron | 35.0% |
ATAGCCTCTAAACAAGACTA+TGG | + | chr7_4:53465367-53465386 | None:intergenic | 35.0% | |
CATTTGCACTTTACCTGAAA+TGG | + | chr7_4:53465398-53465417 | None:intergenic | 35.0% | |
GAAGAAATGCATTCTCATCT+TGG | + | chr7_4:53465491-53465510 | None:intergenic | 35.0% | |
!! | CAGTGTTCATTTTTAGACCA+TGG | - | chr7_4:53465510-53465529 | Msa1162700:CDS | 35.0% |
TTGTTCACAATTCGGAAGAT+AGG | + | chr7_4:53465619-53465638 | None:intergenic | 35.0% | |
AGGTACTTCTCGTTATCAAT+GGG | + | chr7_4:53466036-53466055 | None:intergenic | 35.0% | |
TAGGTACTTCTCGTTATCAA+TGG | + | chr7_4:53466037-53466056 | None:intergenic | 35.0% | |
!!! | TAAGTGAGGTGGAAGTTTTT+TGG | + | chr7_4:53466356-53466375 | None:intergenic | 35.0% |
AATTAAGAGATGTGGTTACC+TGG | - | chr7_4:53466499-53466518 | Msa1162700:CDS | 35.0% | |
GAGGAGAGAAGAGAATATTA+TGG | - | chr7_4:53466523-53466542 | Msa1162700:CDS | 35.0% | |
GCATTTCAATGTATCCTATG+TGG | - | chr7_4:53466794-53466813 | Msa1162700:CDS | 35.0% | |
GTAGCATATAAAACCCACAT+AGG | + | chr7_4:53466811-53466830 | None:intergenic | 35.0% | |
TACACTGAGTCACTTATTAG+TGG | - | chr7_4:53466828-53466847 | Msa1162700:CDS | 35.0% | |
TGTCTGCAAATTCAATAAGG+CGG | - | chr7_4:53466889-53466908 | Msa1162700:CDS | 35.0% | |
ATAAGGCGGTATCAATGTAA+AGG | - | chr7_4:53466903-53466922 | Msa1162700:CDS | 35.0% | |
TGCAACTCTTTATATGCTTG+AGG | - | chr7_4:53467088-53467107 | Msa1162700:five_prime_UTR | 35.0% | |
TCTTTATATGCTTGAGGCAT+AGG | - | chr7_4:53467094-53467113 | Msa1162700:five_prime_UTR | 35.0% | |
TACCAGTTGGAATAACATGT+TGG | + | chr7_4:53467252-53467271 | None:intergenic | 35.0% | |
ACATGTTATTCCAACTGGTA+AGG | - | chr7_4:53467252-53467271 | Msa1162700:five_prime_UTR | 35.0% | |
CATGTTATTCCAACTGGTAA+GGG | - | chr7_4:53467253-53467272 | Msa1162700:five_prime_UTR | 35.0% | |
TATCTATCGGAGAATCTGTT+AGG | + | chr7_4:53467287-53467306 | None:intergenic | 35.0% | |
!! | AAATGCATGCTGATTTCGAA+AGG | + | chr7_4:53467364-53467383 | None:intergenic | 35.0% |
AATCCACACAGCTGAATTTA+TGG | + | chr7_4:53467399-53467418 | None:intergenic | 35.0% | |
TAAATTCAGCTGTGTGGATT+TGG | - | chr7_4:53467399-53467418 | Msa1162700:five_prime_UTR | 35.0% | |
AGAGAGGGAACATTTGTTTG+CGG | + | chr7_4:53463030-53463049 | None:intergenic | 40.0% | |
GAAATAAGAAGGAAGGAGAG+AGG | + | chr7_4:53463046-53463065 | None:intergenic | 40.0% | |
GAACAAAAAATGTGTGGGGT+GGG | + | chr7_4:53463218-53463237 | None:intergenic | 40.0% | |
AGAACAAAAAATGTGTGGGG+TGG | + | chr7_4:53463219-53463238 | None:intergenic | 40.0% | |
!! | AGTAGAAGAAGAAGGTGTTG+TGG | + | chr7_4:53463615-53463634 | None:intergenic | 40.0% |
! | ATTGGTGTTTGAACAGGAAC+AGG | + | chr7_4:53463872-53463891 | None:intergenic | 40.0% |
! | CTTGGAATTGGTGTTTGAAC+AGG | + | chr7_4:53463878-53463897 | None:intergenic | 40.0% |
ATTACACTGCTTCACTTGCT+AGG | - | chr7_4:53464104-53464123 | Msa1162700:intron | 40.0% | |
CTTGCTAGGAAACAGAACAA+TGG | - | chr7_4:53464118-53464137 | Msa1162700:intron | 40.0% | |
ACAGAATTGGATACCTTGGA+AGG | + | chr7_4:53464339-53464358 | None:intergenic | 40.0% | |
TTTGTTGAGAGGCAAGAGAT+TGG | - | chr7_4:53464622-53464641 | Msa1162700:intron | 40.0% | |
!!! | GGCAAGAGATTGGTTTTTGT+TGG | - | chr7_4:53464632-53464651 | Msa1162700:intron | 40.0% |
!! | TGGAAGAGTCCATTTTAGAG+GGG | - | chr7_4:53464742-53464761 | Msa1162700:intron | 40.0% |
CACCATTCTTAGTTCAAGAG+TGG | - | chr7_4:53464924-53464943 | Msa1162700:intron | 40.0% | |
TCCCACTCTTGAACTAAGAA+TGG | + | chr7_4:53464929-53464948 | None:intergenic | 40.0% | |
! | TTTTATCATGAGTCCACCAG+TGG | + | chr7_4:53465057-53465076 | None:intergenic | 40.0% |
AGGAAGGACTATTACCAAGA+AGG | - | chr7_4:53465243-53465262 | Msa1162700:intron | 40.0% | |
TCCGAAGAGCTATAACAACT+TGG | - | chr7_4:53465304-53465323 | Msa1162700:intron | 40.0% | |
CCCAAGTTGTTATAGCTCTT+CGG | + | chr7_4:53465308-53465327 | None:intergenic | 40.0% | |
CCGAAGAGCTATAACAACTT+GGG | - | chr7_4:53465305-53465324 | Msa1162700:intron | 40.0% | |
CGAAGAGCTATAACAACTTG+GGG | - | chr7_4:53465306-53465325 | Msa1162700:intron | 40.0% | |
TATAACAACTTGGGGTAGGT+GGG | - | chr7_4:53465314-53465333 | Msa1162700:intron | 40.0% | |
! | AACAAGACTATGGACTTGGT+TGG | + | chr7_4:53465357-53465376 | None:intergenic | 40.0% |
!! | AACGAGTCTTTCTAGTTCCA+TGG | + | chr7_4:53465530-53465549 | None:intergenic | 40.0% |
!! | TTTAATGCAGTGGTGGACAA+TGG | - | chr7_4:53465977-53465996 | Msa1162700:intron | 40.0% |
GTGATATTCAGGTAGGATAC+AGG | + | chr7_4:53466117-53466136 | None:intergenic | 40.0% | |
TATCCTACCTGAATATCACG+AGG | - | chr7_4:53466118-53466137 | Msa1162700:intron | 40.0% | |
! | TCACGAGGATGACAGATTTT+CGG | - | chr7_4:53466133-53466152 | Msa1162700:CDS | 40.0% |
! | ATGACAGATTTTCGGAAGGA+CGG | - | chr7_4:53466141-53466160 | Msa1162700:CDS | 40.0% |
! | TTTTGCTTCCGGTATATCGA+GGG | + | chr7_4:53466171-53466190 | None:intergenic | 40.0% |
! | ATTTTGCTTCCGGTATATCG+AGG | + | chr7_4:53466172-53466191 | None:intergenic | 40.0% |
! | CAGGTGATAGATTTTGCTTC+CGG | + | chr7_4:53466182-53466201 | None:intergenic | 40.0% |
! | AACGGGGATTTTCTTTCTTC+AGG | + | chr7_4:53466201-53466220 | None:intergenic | 40.0% |
AGAATTTCATTCCACGCATC+AGG | + | chr7_4:53466264-53466283 | None:intergenic | 40.0% | |
TCTTCTGCTGATGCTTATCT+CGG | + | chr7_4:53466314-53466333 | None:intergenic | 40.0% | |
! | CATTTTCTCTCTAGCCTGAA+AGG | - | chr7_4:53466589-53466608 | Msa1162700:intron | 40.0% |
ACAATAGCAATCAGCCTTTC+AGG | + | chr7_4:53466606-53466625 | None:intergenic | 40.0% | |
TATTGAGATGAGCTGTTCCA+CGG | - | chr7_4:53466668-53466687 | Msa1162700:CDS | 40.0% | |
GGCTGTTGCCTTTAAACAAA+AGG | + | chr7_4:53466750-53466769 | None:intergenic | 40.0% | |
TATCTGGTGAATCCAATGCT+GGG | + | chr7_4:53466771-53466790 | None:intergenic | 40.0% | |
TTATCTGGTGAATCCAATGC+TGG | + | chr7_4:53466772-53466791 | None:intergenic | 40.0% | |
CGTTTAAACCTGAGAGTTGA+TGG | - | chr7_4:53467005-53467024 | Msa1162700:CDS | 40.0% | |
TTATATGCTTGAGGCATAGG+AGG | - | chr7_4:53467097-53467116 | Msa1162700:five_prime_UTR | 40.0% | |
CACCAACATGTTATTCCAAC+TGG | - | chr7_4:53467247-53467266 | Msa1162700:five_prime_UTR | 40.0% | |
TGTGGGGTGGGTATAATGTT+TGG | + | chr7_4:53463206-53463225 | None:intergenic | 45.0% | |
! | GTGGTGGAAATTGTTGGAGA+AGG | + | chr7_4:53463596-53463615 | None:intergenic | 45.0% |
! | GGTGTTGTGGTGGAAATTGT+TGG | + | chr7_4:53463602-53463621 | None:intergenic | 45.0% |
!! | AGAAGAAGAAGGTGTTGTGG+TGG | + | chr7_4:53463612-53463631 | None:intergenic | 45.0% |
GTTTGAACAGGAACAGGAAC+AGG | + | chr7_4:53463866-53463885 | None:intergenic | 45.0% | |
CACAATCTGTGAAGTGGTGT+TGG | + | chr7_4:53463921-53463940 | None:intergenic | 45.0% | |
! | AAGAGGCTTCCCCTCTAAAA+TGG | + | chr7_4:53464754-53464773 | None:intergenic | 45.0% |
TTGTCTTCAATACTGGCCAC+TGG | - | chr7_4:53465038-53465057 | Msa1162700:intron | 45.0% | |
CATAGACATGGCTACCTTCT+TGG | + | chr7_4:53465260-53465279 | None:intergenic | 45.0% | |
GAGCTATAACAACTTGGGGT+AGG | - | chr7_4:53465310-53465329 | Msa1162700:intron | 45.0% | |
CTATAACAACTTGGGGTAGG+TGG | - | chr7_4:53465313-53465332 | Msa1162700:intron | 45.0% | |
GCTATTCTGCTTCCCATTTC+AGG | - | chr7_4:53465382-53465401 | Msa1162700:CDS | 45.0% | |
! | AGTGGTTGGCTACAAGTTGA+AGG | - | chr7_4:53465794-53465813 | Msa1162700:CDS | 45.0% |
! | GTGGTTGGCTACAAGTTGAA+GGG | - | chr7_4:53465795-53465814 | Msa1162700:CDS | 45.0% |
!! | CAGTGGTGGACAATGGAATT+CGG | - | chr7_4:53465984-53466003 | Msa1162700:intron | 45.0% |
!! | AGTGGTGGACAATGGAATTC+GGG | - | chr7_4:53465985-53466004 | Msa1162700:intron | 45.0% |
TATCAATGGGCGCAGTTTCA+TGG | + | chr7_4:53466023-53466042 | None:intergenic | 45.0% | |
CATCCTCGTGATATTCAGGT+AGG | + | chr7_4:53466124-53466143 | None:intergenic | 45.0% | |
CTGTCATCCTCGTGATATTC+AGG | + | chr7_4:53466128-53466147 | None:intergenic | 45.0% | |
! | GAGGATGACAGATTTTCGGA+AGG | - | chr7_4:53466137-53466156 | Msa1162700:CDS | 45.0% |
TTTGCTTCCGGTATATCGAG+GGG | + | chr7_4:53466170-53466189 | None:intergenic | 45.0% | |
TGCAGTCTTGGAATCTCAAC+GGG | + | chr7_4:53466218-53466237 | None:intergenic | 45.0% | |
CTGCAGTCTTGGAATCTCAA+CGG | + | chr7_4:53466219-53466238 | None:intergenic | 45.0% | |
GATTCCAAGACTGCAGTCAT+TGG | - | chr7_4:53466223-53466242 | Msa1162700:CDS | 45.0% | |
TATTCTCTTCTCTCCTCACC+AGG | + | chr7_4:53466520-53466539 | None:intergenic | 45.0% | |
TAACTCGAGACAGATAACCG+TGG | + | chr7_4:53466688-53466707 | None:intergenic | 45.0% | |
GGAGGAATGACAGTAAGCAT+TGG | - | chr7_4:53467115-53467134 | Msa1162700:five_prime_UTR | 45.0% | |
!! | ACAGTAAGCATTGGTGCAGA+TGG | - | chr7_4:53467124-53467143 | Msa1162700:five_prime_UTR | 45.0% |
!! | CAGTAAGCATTGGTGCAGAT+GGG | - | chr7_4:53467125-53467144 | Msa1162700:five_prime_UTR | 45.0% |
GTGCCATAAATTCAGCTGTG+TGG | - | chr7_4:53467393-53467412 | Msa1162700:five_prime_UTR | 45.0% | |
!!! | ATTTTAATTTTACTAATTTT+TGG | - | chr7_4:53464366-53464385 | Msa1162700:CDS | 5.0% |
ACAGGAACAGGAACAGGAAC+AGG | + | chr7_4:53463854-53463873 | None:intergenic | 50.0% | |
TCTTCAATACTGGCCACTGG+TGG | - | chr7_4:53465041-53465060 | Msa1162700:intron | 50.0% | |
TCTTAGGCGGGTACTCTGTT+AGG | + | chr7_4:53466056-53466075 | None:intergenic | 50.0% | |
! | AGAGTACCCGCCTAAGATGA+GGG | - | chr7_4:53466059-53466078 | Msa1162700:intron | 50.0% |
TTCTCCAGCACCCTCATCTT+AGG | + | chr7_4:53466072-53466091 | None:intergenic | 50.0% | |
GCAGTCTTGGAATCTCAACG+GGG | + | chr7_4:53466217-53466236 | None:intergenic | 50.0% | |
GCATCAGCAGAAGAGATCCT+AGG | - | chr7_4:53466320-53466339 | Msa1162700:CDS | 50.0% | |
AGAGATGTGGTTACCTGGTG+AGG | - | chr7_4:53466504-53466523 | Msa1162700:CDS | 50.0% | |
TAAAGGCAACAGCCCAGCAT+TGG | - | chr7_4:53466756-53466775 | Msa1162700:CDS | 50.0% | |
GCTTGTCACCATCAACTCTC+AGG | + | chr7_4:53467016-53467035 | None:intergenic | 50.0% | |
CTTGGAAGGCTGCAACCCTT+AGG | + | chr7_4:53464325-53464344 | None:intergenic | 55.0% | |
CTAAGGGTTGCAGCCTTCCA+AGG | - | chr7_4:53464323-53464342 | Msa1162700:CDS | 55.0% | |
GGTGGACAATGGAATTCGGG+TGG | - | chr7_4:53465988-53466007 | Msa1162700:intron | 55.0% | |
! | CAGAGTACCCGCCTAAGATG+AGG | - | chr7_4:53466058-53466077 | Msa1162700:intron | 55.0% |
TCCAGCACCCTCATCTTAGG+CGG | + | chr7_4:53466069-53466088 | None:intergenic | 55.0% | |
ACGGTCACCCCTCGATATAC+CGG | - | chr7_4:53466160-53466179 | Msa1162700:CDS | 55.0% | |
GGCACCAATGACTGCAGTCT+TGG | + | chr7_4:53466230-53466249 | None:intergenic | 55.0% | |
! | TGCAGTCATTGGTGCCTTCC+TGG | - | chr7_4:53466234-53466253 | Msa1162700:CDS | 55.0% |
ACGCATCAGGAACACCAGGA+AGG | + | chr7_4:53466251-53466270 | None:intergenic | 55.0% | |
TTCCTGGTGTTCCTGATGCG+TGG | - | chr7_4:53466250-53466269 | Msa1162700:CDS | 55.0% | |
TTCCACGCATCAGGAACACC+AGG | + | chr7_4:53466255-53466274 | None:intergenic | 55.0% | |
GGCTGCAATTGTGATGCGAC+TGG | + | chr7_4:53466945-53466964 | None:intergenic | 55.0% | |
GCGCACAATCCCTTACCAGT+TGG | + | chr7_4:53467265-53467284 | None:intergenic | 55.0% | |
CCAGCACCCTCATCTTAGGC+GGG | + | chr7_4:53466068-53466087 | None:intergenic | 60.0% | |
! | CCCGCCTAAGATGAGGGTGC+TGG | - | chr7_4:53466065-53466084 | Msa1162700:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_4 | gene | 53463018 | 53467447 | 53463018 | ID=Msa1162700;Name=Msa1162700 |
chr7_4 | mRNA | 53463018 | 53467447 | 53463018 | ID=Msa1162700-mRNA-1;Parent=Msa1162700;Name=Msa1162700-mRNA-1;_AED=0.13;_eAED=0.13;_QI=389|1|1|1|0.66|0.57|7|305|605 |
chr7_4 | exon | 53463018 | 53463322 | 53463018 | ID=Msa1162700-mRNA-1:exon:15454;Parent=Msa1162700-mRNA-1 |
chr7_4 | exon | 53464124 | 53464478 | 53464124 | ID=Msa1162700-mRNA-1:exon:15453;Parent=Msa1162700-mRNA-1 |
chr7_4 | exon | 53465062 | 53465220 | 53465062 | ID=Msa1162700-mRNA-1:exon:15452;Parent=Msa1162700-mRNA-1 |
chr7_4 | exon | 53465379 | 53465572 | 53465379 | ID=Msa1162700-mRNA-1:exon:15451;Parent=Msa1162700-mRNA-1 |
chr7_4 | exon | 53465675 | 53465867 | 53465675 | ID=Msa1162700-mRNA-1:exon:15450;Parent=Msa1162700-mRNA-1 |
chr7_4 | exon | 53466121 | 53466578 | 53466121 | ID=Msa1162700-mRNA-1:exon:15449;Parent=Msa1162700-mRNA-1 |
chr7_4 | exon | 53466600 | 53467447 | 53466600 | ID=Msa1162700-mRNA-1:exon:15448;Parent=Msa1162700-mRNA-1 |
chr7_4 | five_prime_UTR | 53467059 | 53467447 | 53467059 | ID=Msa1162700-mRNA-1:five_prime_utr;Parent=Msa1162700-mRNA-1 |
chr7_4 | CDS | 53466600 | 53467058 | 53466600 | ID=Msa1162700-mRNA-1:cds;Parent=Msa1162700-mRNA-1 |
chr7_4 | CDS | 53466121 | 53466578 | 53466121 | ID=Msa1162700-mRNA-1:cds;Parent=Msa1162700-mRNA-1 |
chr7_4 | CDS | 53465675 | 53465867 | 53465675 | ID=Msa1162700-mRNA-1:cds;Parent=Msa1162700-mRNA-1 |
chr7_4 | CDS | 53465379 | 53465572 | 53465379 | ID=Msa1162700-mRNA-1:cds;Parent=Msa1162700-mRNA-1 |
chr7_4 | CDS | 53465062 | 53465220 | 53465062 | ID=Msa1162700-mRNA-1:cds;Parent=Msa1162700-mRNA-1 |
chr7_4 | CDS | 53464124 | 53464478 | 53464124 | ID=Msa1162700-mRNA-1:cds;Parent=Msa1162700-mRNA-1 |
chr7_4 | three_prime_UTR | 53463018 | 53463322 | 53463018 | ID=Msa1162700-mRNA-1:three_prime_utr;Parent=Msa1162700-mRNA-1 |
Gene Sequence |
Protein sequence |