Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1164140 | XP_003625346.1 | 96.948 | 688 | 20 | 1 | 1 | 688 | 1 | 687 | 0.0 | 1375 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1164140 | sp|F4I443|BARD1_ARATH | 40.420 | 715 | 375 | 11 | 15 | 687 | 8 | 713 | 2.47e-168 | 502 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1164140 | G7KXD0 | 96.948 | 688 | 20 | 1 | 1 | 688 | 1 | 687 | 0.0 | 1375 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1037220 | Msa1164140 | 0.869862 | 2.251958e-66 | -8.615850e-47 |
| Msa1077490 | Msa1164140 | 0.945414 | 3.195228e-104 | -8.615850e-47 |
| Msa1164140 | Msa1368820 | 0.867092 | 1.765200e-65 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1164140 | MtrunA17_Chr7g0261781 | 96.948 | 688 | 20 | 1 | 1 | 688 | 1 | 687 | 0.0 | 1375 |
| Msa1164140 | MtrunA17_Chr2g0285611 | 45.573 | 384 | 193 | 5 | 316 | 684 | 621 | 1003 | 1.98e-100 | 330 |
| Msa1164140 | MtrunA17_Chr2g0285611 | 40.476 | 84 | 50 | 0 | 20 | 103 | 1 | 84 | 8.32e-15 | 78.6 |
| Msa1164140 | MtrunA17_Chr2g0316851 | 42.697 | 89 | 49 | 2 | 351 | 438 | 425 | 512 | 1.49e-17 | 87.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1164140 | AT1G04020.2 | 40.979 | 715 | 370 | 14 | 15 | 687 | 8 | 712 | 1.38e-168 | 500 |
| Msa1164140 | AT1G04020.1 | 40.979 | 715 | 370 | 14 | 15 | 687 | 8 | 712 | 1.78e-168 | 500 |
| Msa1164140 | AT4G21070.1 | 42.932 | 382 | 196 | 5 | 316 | 683 | 564 | 937 | 6.17e-97 | 320 |
| Msa1164140 | AT4G21070.1 | 35.135 | 74 | 48 | 0 | 22 | 95 | 6 | 79 | 7.67e-13 | 72.8 |
| Msa1164140 | AT3G15120.2 | 46.914 | 81 | 41 | 2 | 353 | 432 | 560 | 639 | 2.38e-17 | 87.4 |
Find 150 sgRNAs with CRISPR-Local
Find 427 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAAAGAATGCCTCATTTC+TGG | 0.160062 | 7_4:+55685116 | Msa1164140:CDS |
| GCCCTAAGTCTGCCAGCTTT+TGG | 0.189747 | 7_4:-55688439 | None:intergenic |
| TCCTCCAGCTCACATCCTTC+TGG | 0.242149 | 7_4:-55689071 | None:intergenic |
| ATGCACCAAATGCGGTAAAA+AGG | 0.243480 | 7_4:+55685910 | Msa1164140:CDS |
| TGTAGATAATATGAGGGTTT+TGG | 0.256404 | 7_4:+55684604 | Msa1164140:intron |
| TTGTCCATCCATCCTTTAAT+AGG | 0.281812 | 7_4:+55689236 | Msa1164140:three_prime_UTR |
| AGTCAATTACTGCATGTAAA+TGG | 0.296568 | 7_4:+55689291 | Msa1164140:three_prime_UTR |
| AGGACGAAGTTTCAATTCTT+TGG | 0.304998 | 7_4:+55689090 | Msa1164140:CDS |
| TTGATCACTGCAACCATTAT+CGG | 0.314415 | 7_4:-55684888 | None:intergenic |
| TTTCAAGATATATCTTGTTT+TGG | 0.319068 | 7_4:+55689434 | Msa1164140:three_prime_UTR |
| ATTTATGGGTGGCAGATATT+AGG | 0.319180 | 7_4:+55684398 | Msa1164140:intron |
| ACAGTTGAACAACCTATTAA+AGG | 0.323879 | 7_4:-55689248 | None:intergenic |
| CATTTCAGCCACTCAGTCTT+GGG | 0.329142 | 7_4:+55685038 | Msa1164140:intron |
| AAGCTGAATTGTAAAGAGTT+TGG | 0.335005 | 7_4:-55684634 | None:intergenic |
| TTAAGATTAGATTTCTCGTT+TGG | 0.335991 | 7_4:-55686170 | None:intergenic |
| TGTTGGTCACATGTGGATTC+TGG | 0.341840 | 7_4:+55689268 | Msa1164140:three_prime_UTR |
| GATACCAAAGGTTCCGATAA+TGG | 0.345510 | 7_4:+55684875 | Msa1164140:CDS |
| CCTCCAGCTCACATCCTTCT+GGG | 0.350103 | 7_4:-55689070 | None:intergenic |
| AACACCAAGTGCTCTCAAAA+AGG | 0.361103 | 7_4:+55683813 | Msa1164140:CDS |
| GAACCTTTGGTATCACAAAA+TGG | 0.366178 | 7_4:-55684866 | None:intergenic |
| TTATGCACATGCACAACATT+TGG | 0.367201 | 7_4:-55685584 | None:intergenic |
| CATGCAATCATTTGTTCTGC+AGG | 0.370198 | 7_4:+55683646 | Msa1164140:CDS |
| AACGAACAAATGCTTGTACT+TGG | 0.370350 | 7_4:-55685337 | None:intergenic |
| TTGGGCCACCTTGACACCCT+TGG | 0.379821 | 7_4:-55688420 | None:intergenic |
| TTGATTCAAATTCATTGAAT+CGG | 0.381674 | 7_4:-55684816 | None:intergenic |
| TGGACATCTCTGCTTGCCGC+TGG | 0.384677 | 7_4:+55685993 | Msa1164140:CDS |
| TGATTAATGTAGATAATATG+AGG | 0.386495 | 7_4:+55684597 | Msa1164140:intron |
| TCATTTCAGCCACTCAGTCT+TGG | 0.387574 | 7_4:+55685037 | Msa1164140:intron |
| TATAATTGACAGTTCCTGTT+TGG | 0.387979 | 7_4:+55683752 | Msa1164140:intron |
| ATCTCAACAGTCAAACCAAT+TGG | 0.394758 | 7_4:+55686500 | Msa1164140:CDS |
| GAAATCTAATCTTAATAAAC+AGG | 0.395261 | 7_4:+55686178 | Msa1164140:CDS |
| GCATTTAAGCTTTGCTCCCC+GGG | 0.397136 | 7_4:-55685891 | None:intergenic |
| TGCATTTAAGCTTTGCTCCC+CGG | 0.401241 | 7_4:-55685892 | None:intergenic |
| TGCAAGTGGGATTTCAGTTA+CGG | 0.402316 | 7_4:+55685544 | Msa1164140:CDS |
| TTTAAGCCACTGAATAGCTT+TGG | 0.403126 | 7_4:-55688900 | None:intergenic |
| GTGTTTATTTGCAGAAGATC+TGG | 0.408179 | 7_4:+55689366 | Msa1164140:three_prime_UTR |
| TTCAGCTTGTTGTAATAAGA+AGG | 0.410062 | 7_4:+55684649 | Msa1164140:CDS |
| TGATTCAAATTCATTGAATC+GGG | 0.415392 | 7_4:-55684815 | None:intergenic |
| GCAACCATTATCGGAACCTT+TGG | 0.416479 | 7_4:-55684879 | None:intergenic |
| CGAAGTACTATCCGCCAAAC+AGG | 0.421815 | 7_4:-55683766 | None:intergenic |
| TTGAAAAGATCAAGCACAAC+AGG | 0.427870 | 7_4:+55685079 | Msa1164140:CDS |
| TATCTTGAAGATTTAGTTGA+AGG | 0.428100 | 7_4:+55688963 | Msa1164140:CDS |
| CTTGAACTCGTTCAAGAAAC+CGG | 0.428227 | 7_4:+55683614 | Msa1164140:CDS |
| GTTGGTAAGAATCTCCAATC+TGG | 0.431033 | 7_4:+55684716 | Msa1164140:CDS |
| CACAAGCTTGTTATGATATG+AGG | 0.431338 | 7_4:-55685233 | None:intergenic |
| GCAAGTGGGATTTCAGTTAC+GGG | 0.433006 | 7_4:+55685545 | Msa1164140:CDS |
| CATTCATCTTAATCCCAGAT+TGG | 0.433543 | 7_4:-55684730 | None:intergenic |
| GCCCAAAAGCTGGCAGACTT+AGG | 0.435598 | 7_4:+55688437 | Msa1164140:CDS |
| TCACAAAATGGAGGGCTGTC+TGG | 0.440217 | 7_4:-55684854 | None:intergenic |
| TGCTCTATCAAATGAAGAAA+AGG | 0.440938 | 7_4:+55686566 | Msa1164140:CDS |
| TGATTGCATGGCAACAAAAC+CGG | 0.443356 | 7_4:-55683633 | None:intergenic |
| ATGCAAATGGAGCATGCTCC+AGG | 0.445574 | 7_4:+55687710 | Msa1164140:CDS |
| TTAATAGGTTGTTCAACTGT+TGG | 0.447411 | 7_4:+55689251 | Msa1164140:three_prime_UTR |
| TCATGTATGTCGAATGAAGC+TGG | 0.448014 | 7_4:+55684692 | Msa1164140:CDS |
| TGGAAGAGATGCAAATTTGT+TGG | 0.451134 | 7_4:+55689028 | Msa1164140:CDS |
| GCAAGACATTTCAACCTCCT+TGG | 0.455564 | 7_4:-55684759 | None:intergenic |
| AGTAACAATTTATAAAAGCT+TGG | 0.458646 | 7_4:+55684444 | Msa1164140:CDS |
| TTTAATTTCCAAGTCACAGC+AGG | 0.459412 | 7_4:-55685260 | None:intergenic |
| TGTCAAGGTGGCCCAAAAGC+TGG | 0.460255 | 7_4:+55688427 | Msa1164140:CDS |
| AAGTCACTTGGTGCATTTGA+AGG | 0.460513 | 7_4:-55685310 | None:intergenic |
| AGATCAAGCACAACAGGAAA+AGG | 0.464808 | 7_4:+55685085 | Msa1164140:CDS |
| CCACGTGTGACCAGCAGTAT+TGG | 0.465249 | 7_4:-55689144 | None:intergenic |
| TACATACAGATGAGATGAAA+CGG | 0.468670 | 7_4:-55686216 | None:intergenic |
| CATCCTGAAAAGCTCCCAAT+TGG | 0.469644 | 7_4:-55686515 | None:intergenic |
| CCCAAAAGCTGGCAGACTTA+GGG | 0.477453 | 7_4:+55688438 | Msa1164140:CDS |
| AATTGACAGTTCCTGTTTGG+CGG | 0.477944 | 7_4:+55683755 | Msa1164140:intron |
| ACACTAAATTATTGAATCCA+TGG | 0.481895 | 7_4:+55683453 | Msa1164140:CDS |
| AGCAAGGATGACTTGGAAGT+TGG | 0.485500 | 7_4:+55689008 | Msa1164140:CDS |
| TGTGGATTCCTGCTGTGACT+TGG | 0.485655 | 7_4:+55685252 | Msa1164140:CDS |
| CCTCAAAACTTTCAATGTCC+TGG | 0.491069 | 7_4:-55687728 | None:intergenic |
| ATTTGAAAGCAGAAGTGGCC+CGG | 0.498029 | 7_4:+55685873 | Msa1164140:CDS |
| TCGAACTCAAATGCCCTCTC+TGG | 0.499084 | 7_4:+55683501 | Msa1164140:CDS |
| CAATCTGGGATTAAGATGAA+TGG | 0.501975 | 7_4:+55684731 | Msa1164140:CDS |
| AGCTGGCAGACTTAGGGCAT+TGG | 0.502279 | 7_4:+55688444 | Msa1164140:CDS |
| ACGAACAAATGCTTGTACTT+GGG | 0.507695 | 7_4:-55685336 | None:intergenic |
| GACATCTGAGGTCCAACACT+TGG | 0.507792 | 7_4:-55687665 | None:intergenic |
| TTTGAAAAGCAAGGATGACT+TGG | 0.512599 | 7_4:+55689001 | Msa1164140:CDS |
| TCTCAACAGTCAAACCAATT+GGG | 0.512820 | 7_4:+55686501 | Msa1164140:CDS |
| TTTGAAAGCAGAAGTGGCCC+GGG | 0.516786 | 7_4:+55685874 | Msa1164140:CDS |
| TGCATAAAGTTTGTATTGAC+TGG | 0.518801 | 7_4:+55685600 | Msa1164140:CDS |
| ACATACAGATGAGATGAAAC+GGG | 0.524043 | 7_4:-55686215 | None:intergenic |
| AATTTAACTGCCAATACTGC+TGG | 0.525045 | 7_4:+55689134 | Msa1164140:CDS |
| GGACATCTCTGCTTGCCGCT+GGG | 0.525265 | 7_4:+55685994 | Msa1164140:CDS |
| ATTACTGCATGTAAATGGAA+TGG | 0.528661 | 7_4:+55689296 | Msa1164140:three_prime_UTR |
| ATCTTGAAGATTTAGTTGAA+GGG | 0.529491 | 7_4:+55688964 | Msa1164140:CDS |
| TGGGATTTCAGTTACGGGAG+AGG | 0.530631 | 7_4:+55685550 | Msa1164140:CDS |
| AATTGGTTTGACTGTTGAGA+TGG | 0.531695 | 7_4:-55686498 | None:intergenic |
| TAAGAATTTGAAAGCAGAAG+TGG | 0.531904 | 7_4:+55685868 | Msa1164140:CDS |
| GAGTGCATTTAGCTAACAAA+AGG | 0.535263 | 7_4:-55689200 | None:intergenic |
| AAGAATCTTACAAATGAAGA+TGG | 0.536135 | 7_4:+55685193 | Msa1164140:CDS |
| CTCCAGCTCACATCCTTCTG+GGG | 0.537723 | 7_4:-55689069 | None:intergenic |
| ATCGCAGCAACTGATGCAAA+TGG | 0.538793 | 7_4:+55687697 | Msa1164140:CDS |
| TTATCATGTTCCTTGTGCAA+TGG | 0.539201 | 7_4:+55685973 | Msa1164140:CDS |
| TGAAATGTCTTGCAAGAGAG+GGG | 0.539341 | 7_4:+55684769 | Msa1164140:CDS |
| GTGCTACAGTGTCCAAGTGT+TGG | 0.540316 | 7_4:+55687653 | Msa1164140:CDS |
| TGGACAATGGATCCTAAAAG+TGG | 0.544609 | 7_4:+55687762 | Msa1164140:CDS |
| GTACTTGGGTACAAGTCACT+TGG | 0.546415 | 7_4:-55685322 | None:intergenic |
| CATGTATGTCGAATGAAGCT+GGG | 0.548971 | 7_4:+55684693 | Msa1164140:CDS |
| CTCATATCATAACAAGCTTG+TGG | 0.548979 | 7_4:+55685234 | Msa1164140:CDS |
| GTTCAACTGTTGGTCACATG+TGG | 0.551305 | 7_4:+55689261 | Msa1164140:three_prime_UTR |
| GATTAATGTAGATAATATGA+GGG | 0.554553 | 7_4:+55684598 | Msa1164140:intron |
| CTTGAAGATTTAGTTGAAGG+GGG | 0.555879 | 7_4:+55688966 | Msa1164140:CDS |
| TTCAGCCACTCAGTCTTGGG+AGG | 0.556513 | 7_4:+55685041 | Msa1164140:intron |
| TTGGTAAGAATCTCCAATCT+GGG | 0.560996 | 7_4:+55684717 | Msa1164140:CDS |
| CTTGACAACCAAGGGTGTCA+AGG | 0.567725 | 7_4:+55688412 | Msa1164140:CDS |
| AAATTGATCTTGACAACCAA+GGG | 0.574072 | 7_4:+55688404 | Msa1164140:CDS |
| CTGCAGAACAAATGATTGCA+TGG | 0.574306 | 7_4:-55683645 | None:intergenic |
| TCCAGCTCACATCCTTCTGG+GGG | 0.577657 | 7_4:-55689068 | None:intergenic |
| AGTTACGGGAGAGGCTGCAA+TGG | 0.578569 | 7_4:+55685559 | Msa1164140:CDS |
| ACAACCTATTAAAGGATGGA+TGG | 0.580801 | 7_4:-55689240 | None:intergenic |
| TCTTGAAGATTTAGTTGAAG+GGG | 0.582313 | 7_4:+55688965 | Msa1164140:CDS |
| TTGAAATGTCTTGCAAGAGA+GGG | 0.584122 | 7_4:+55684768 | Msa1164140:CDS |
| GGCATGCTATGTAGCACTGA+TGG | 0.585008 | 7_4:+55689472 | Msa1164140:three_prime_UTR |
| ATTAAATCTGACAAGGACAC+TGG | 0.589287 | 7_4:+55685277 | Msa1164140:CDS |
| CCAATACTGCTGGTCACACG+TGG | 0.589787 | 7_4:+55689144 | Msa1164140:CDS |
| TTGAACAACCTATTAAAGGA+TGG | 0.597295 | 7_4:-55689244 | None:intergenic |
| GTTGAAATGTCTTGCAAGAG+AGG | 0.597499 | 7_4:+55684767 | Msa1164140:CDS |
| TCAGTCCTCTAAAATTTCCG+AGG | 0.607511 | 7_4:+55685363 | Msa1164140:CDS |
| GATGGACAAAACATCGGCTA+CGG | 0.612710 | 7_4:-55689222 | None:intergenic |
| TTGTAATAAGAAGGTTGACA+AGG | 0.615588 | 7_4:+55684658 | Msa1164140:CDS |
| GAACTTTCAGACCAGAAATG+AGG | 0.616687 | 7_4:-55685127 | None:intergenic |
| TAAGATGAATGGTAAAGCCA+AGG | 0.625403 | 7_4:+55684742 | Msa1164140:CDS |
| TAGGAGCCAAAGCTATTCAG+TGG | 0.629124 | 7_4:+55688894 | Msa1164140:intron |
| CAATGCTGCATTATGCAAGT+GGG | 0.630040 | 7_4:+55685531 | Msa1164140:CDS |
| GTGGGAATACGTACCAGAGA+GGG | 0.630855 | 7_4:-55683514 | None:intergenic |
| CTTGGAAATTAAATCTGACA+AGG | 0.632331 | 7_4:+55685270 | Msa1164140:CDS |
| CCCAGAAGGATGTGAGCTGG+AGG | 0.636838 | 7_4:+55689070 | Msa1164140:CDS |
| CCTTTGGTATCACAAAATGG+AGG | 0.637016 | 7_4:-55684863 | None:intergenic |
| CTTTGGTATCACAAAATGGA+GGG | 0.637647 | 7_4:-55684862 | None:intergenic |
| AAGCTTAAATGCACCAAATG+CGG | 0.643172 | 7_4:+55685902 | Msa1164140:CDS |
| GGGCGATTCTAAATGGACAA+TGG | 0.643804 | 7_4:+55687749 | Msa1164140:CDS |
| GCAGAGATGTCCATTGCACA+AGG | 0.645765 | 7_4:-55685983 | None:intergenic |
| AATTTGACATTTGAATGACT+AGG | 0.646106 | 7_4:-55686146 | None:intergenic |
| AGGATGGATGGACAAAACAT+CGG | 0.648149 | 7_4:-55689228 | None:intergenic |
| GAAATTGATCTTGACAACCA+AGG | 0.650029 | 7_4:+55688403 | Msa1164140:CDS |
| AAGTTCTGCCTCTGAAAACG+AGG | 0.652089 | 7_4:+55685144 | Msa1164140:CDS |
| CAGTGATCAAAACAGCGAGA+AGG | 0.652921 | 7_4:+55684901 | Msa1164140:CDS |
| TCAGACCTCCCAAGACTGAG+TGG | 0.663906 | 7_4:-55685046 | None:intergenic |
| ATGTCGAATGAAGCTGGGGT+TGG | 0.666481 | 7_4:+55684698 | Msa1164140:CDS |
| AATCGGGCTTCTCTGCAATG+TGG | 0.666514 | 7_4:-55684799 | None:intergenic |
| TCAATGCTGCATTATGCAAG+TGG | 0.666996 | 7_4:+55685530 | Msa1164140:CDS |
| GACAACCAAGGGTGTCAAGG+TGG | 0.671065 | 7_4:+55688415 | Msa1164140:CDS |
| GAAATGTCTTGCAAGAGAGG+GGG | 0.674263 | 7_4:+55684770 | Msa1164140:CDS |
| TCACCAACAAAATACACTTG+TGG | 0.680479 | 7_4:-55685839 | None:intergenic |
| GATGAATGGTAAAGCCAAGG+AGG | 0.681257 | 7_4:+55684745 | Msa1164140:CDS |
| GATCACATGTGTGACATCTG+AGG | 0.687581 | 7_4:-55687677 | None:intergenic |
| AGTGGGAATACGTACCAGAG+AGG | 0.707061 | 7_4:-55683515 | None:intergenic |
| TTGAAAGCAGAAGTGGCCCG+GGG | 0.714591 | 7_4:+55685875 | Msa1164140:CDS |
| ATGTATGTCGAATGAAGCTG+GGG | 0.735457 | 7_4:+55684694 | Msa1164140:CDS |
| AAAGATGTACATGATCCCAG+CGG | 0.784099 | 7_4:-55686009 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAATAAAATTTAATTAT+GGG | - | chr7_4:55688054-55688073 | None:intergenic | 0.0% |
| !!! | TTTTTAATAAAATTTAATTA+TGG | - | chr7_4:55688055-55688074 | None:intergenic | 0.0% |
| !! | GACAAAAATAAAATTAAAAA+TGG | - | chr7_4:55683545-55683564 | None:intergenic | 10.0% |
| !!! | TAATTTTATTTTTGTCATTT+AGG | + | chr7_4:55683549-55683568 | Msa1164140:intron | 10.0% |
| !!! | TTTCTTTTTATTTCATTTTT+AGG | + | chr7_4:55683693-55683712 | Msa1164140:intron | 10.0% |
| !!! | TTGATTTTTGATTTATTTTT+TGG | + | chr7_4:55684023-55684042 | Msa1164140:intron | 10.0% |
| !!! | GAATTTTCTTATTTATATTT+TGG | + | chr7_4:55684926-55684945 | Msa1164140:intron | 10.0% |
| !! | TTTATTAAAAACTTGTATAT+TGG | + | chr7_4:55688064-55688083 | Msa1164140:intron | 10.0% |
| !! | TTATTAAAAACTTGTATATT+GGG | + | chr7_4:55688065-55688084 | Msa1164140:intron | 10.0% |
| !! | AAATTAAAAATGGAAAAAGT+GGG | - | chr7_4:55683535-55683554 | None:intergenic | 15.0% |
| !! | AAAATTAAAAATGGAAAAAG+TGG | - | chr7_4:55683536-55683555 | None:intergenic | 15.0% |
| !! | TTTATTCAAAAGAAGTTTAA+TGG | - | chr7_4:55684213-55684232 | None:intergenic | 15.0% |
| !!! | TTGTTTTTATACTGTTTTTA+AGG | + | chr7_4:55686456-55686475 | Msa1164140:intron | 15.0% |
| !! | ATAATATATTTGTAGAATAG+TGG | + | chr7_4:55686779-55686798 | Msa1164140:intron | 15.0% |
| !!! | TCATCATTAAACAAAATTTT+GGG | - | chr7_4:55687176-55687195 | None:intergenic | 15.0% |
| !!! | ATCATCATTAAACAAAATTT+TGG | - | chr7_4:55687177-55687196 | None:intergenic | 15.0% |
| !!! | AAAATTTTGTTTAATGATGA+TGG | + | chr7_4:55687176-55687195 | Msa1164140:intron | 15.0% |
| !!! | ATTGTTTTTGCAAATAAATA+AGG | + | chr7_4:55687287-55687306 | Msa1164140:intron | 15.0% |
| !! | ATATTCATTGTTAAATTACT+TGG | + | chr7_4:55688834-55688853 | Msa1164140:intron | 15.0% |
| !!! | TAGCTTATTTGATTTTTTGT+TGG | + | chr7_4:55683582-55683601 | Msa1164140:intron | 20.0% |
| !!! | ATTTAGATTTGTGTTTTAAG+AGG | + | chr7_4:55683875-55683894 | Msa1164140:intron | 20.0% |
| !!! | ATTTTGTTGATTAATATGCT+TGG | + | chr7_4:55684286-55684305 | Msa1164140:intron | 20.0% |
| !! | AGTAACAATTTATAAAAGCT+TGG | + | chr7_4:55684444-55684463 | Msa1164140:CDS | 20.0% |
| !! | TGATTAATGTAGATAATATG+AGG | + | chr7_4:55684597-55684616 | Msa1164140:intron | 20.0% |
| !! | GATTAATGTAGATAATATGA+GGG | + | chr7_4:55684598-55684617 | Msa1164140:intron | 20.0% |
| !! | TTGATTCAAATTCATTGAAT+CGG | - | chr7_4:55684819-55684838 | None:intergenic | 20.0% |
| !!! | ATATTCTTGATGTATGTTTT+TGG | + | chr7_4:55685665-55685684 | Msa1164140:intron | 20.0% |
| !! | GAAATCTAATCTTAATAAAC+AGG | + | chr7_4:55686178-55686197 | Msa1164140:CDS | 20.0% |
| !! | AGTAATCTTCTATTTATGTT+TGG | + | chr7_4:55686242-55686261 | Msa1164140:intron | 20.0% |
| !! | TAATCTTCGAAGTAAATAAA+TGG | - | chr7_4:55686329-55686348 | None:intergenic | 20.0% |
| !! | ATAAAAACAAGACAAGAAAA+AGG | - | chr7_4:55686446-55686465 | None:intergenic | 20.0% |
| !! | TTAATTCATCCATCAATTTA+AGG | - | chr7_4:55687221-55687240 | None:intergenic | 20.0% |
| !!! | TAAATTGATGGATGAATTAA+AGG | + | chr7_4:55687221-55687240 | Msa1164140:intron | 20.0% |
| !!! | AGTTAATTATCTTGTTTTTG+AGG | + | chr7_4:55687262-55687281 | Msa1164140:intron | 20.0% |
| !! | ACTCAATAATTCATTATCAT+AGG | + | chr7_4:55687354-55687373 | Msa1164140:intron | 20.0% |
| !! | ATTCATTATCATAGGAAAAA+TGG | + | chr7_4:55687362-55687381 | Msa1164140:intron | 20.0% |
| !! | AAGTTATTTGATATGATGAT+AGG | + | chr7_4:55687390-55687409 | Msa1164140:intron | 20.0% |
| !! | ACTCAATAATTCATTATCAT+AGG | + | chr7_4:55687354-55687373 | Msa1164140:intron | 20.0% |
| !! | AAGTTATTTGATATGATGAT+AGG | + | chr7_4:55687390-55687409 | Msa1164140:intron | 20.0% |
| !! | TAATATATTTATCCTCTTGA+TGG | + | chr7_4:55687594-55687613 | Msa1164140:intron | 20.0% |
| !! | GACAAATATTGATGAATTAA+TGG | + | chr7_4:55687852-55687871 | Msa1164140:intron | 20.0% |
| !! | GAAGAAAACAAAACAATAAA+TGG | - | chr7_4:55688012-55688031 | None:intergenic | 20.0% |
| !! | ATAATGATGATATTGTTAAC+AGG | - | chr7_4:55688224-55688243 | None:intergenic | 20.0% |
| !! | TAATGAAAAAATACTTACGT+TGG | - | chr7_4:55688470-55688489 | None:intergenic | 20.0% |
| !!! | ATATGTTGTCCATTTTTAAT+TGG | + | chr7_4:55689343-55689362 | Msa1164140:three_prime_UTR | 20.0% |
| !!! | TATGTTGTCCATTTTTAATT+GGG | + | chr7_4:55689344-55689363 | Msa1164140:three_prime_UTR | 20.0% |
| !! | AATAAACACCCAATTAAAAA+TGG | - | chr7_4:55689355-55689374 | None:intergenic | 20.0% |
| !!! | TTTCAAGATATATCTTGTTT+TGG | + | chr7_4:55689434-55689453 | Msa1164140:three_prime_UTR | 20.0% |
| !!! | TTTTGGCATTTAAGATATTA+AGG | + | chr7_4:55689451-55689470 | Msa1164140:three_prime_UTR | 20.0% |
| !!! | TTCCATTTTTGTGAGTTTTT+GGG | - | chr7_4:55683405-55683424 | None:intergenic | 25.0% |
| !!! | TTTCCATTTTTGTGAGTTTT+TGG | - | chr7_4:55683406-55683425 | None:intergenic | 25.0% |
| ! | ACACTAAATTATTGAATCCA+TGG | + | chr7_4:55683453-55683472 | Msa1164140:CDS | 25.0% |
| !!! | ATTATTTTAGATGTTCAACG+AGG | + | chr7_4:55683950-55683969 | Msa1164140:intron | 25.0% |
| !!! | TTATTTTAGATGTTCAACGA+GGG | + | chr7_4:55683951-55683970 | Msa1164140:intron | 25.0% |
| ! | CAAACATTATAACTCATCAT+TGG | - | chr7_4:55684006-55684025 | None:intergenic | 25.0% |
| !! | TCAGTGTAAACATTTTTACA+CGG | + | chr7_4:55684065-55684084 | Msa1164140:intron | 25.0% |
| !!! | TTCCTACTTGTTTAATTTGT+GGG | + | chr7_4:55684255-55684274 | Msa1164140:intron | 25.0% |
| !!! | ATGTGTTGATTGCAAATTTA+TGG | + | chr7_4:55684383-55684402 | Msa1164140:intron | 25.0% |
| !!! | TGTGTTGATTGCAAATTTAT+GGG | + | chr7_4:55684384-55684403 | Msa1164140:intron | 25.0% |
| !! | GTTACTATATTTTCCACAAA+AGG | - | chr7_4:55684430-55684449 | None:intergenic | 25.0% |
| ! | TGATTCAAATTCATTGAATC+GGG | - | chr7_4:55684818-55684837 | None:intergenic | 25.0% |
| ! | AAGAATCTTACAAATGAAGA+TGG | + | chr7_4:55685193-55685212 | Msa1164140:CDS | 25.0% |
| ! | ATGCATATCATATATTACCT+CGG | - | chr7_4:55685383-55685402 | None:intergenic | 25.0% |
| ! | ATAATAAACAATGCATACAC+AGG | - | chr7_4:55685642-55685661 | None:intergenic | 25.0% |
| !!! | CTTTTAGTTCTGTTAGAATT+TGG | + | chr7_4:55685779-55685798 | Msa1164140:intron | 25.0% |
| ! | ACAGAAACACAAATTTGAAA+AGG | - | chr7_4:55686066-55686085 | None:intergenic | 25.0% |
| ! | AATTTGACATTTGAATGACT+AGG | - | chr7_4:55686149-55686168 | None:intergenic | 25.0% |
| ! | TTAAGATTAGATTTCTCGTT+TGG | - | chr7_4:55686173-55686192 | None:intergenic | 25.0% |
| ! | GGTAGATTGTATTTGTATAA+TGG | + | chr7_4:55686263-55686282 | Msa1164140:intron | 25.0% |
| ! | CATAATAGTATATGTACAGA+CGG | + | chr7_4:55686383-55686402 | Msa1164140:intron | 25.0% |
| !! | GCAATTATACTTTCTGTTTT+TGG | + | chr7_4:55686888-55686907 | Msa1164140:intron | 25.0% |
| !! | TTTTACTGATAAGGTAAAAG+GGG | - | chr7_4:55686958-55686977 | None:intergenic | 25.0% |
| !! | GTTTTACTGATAAGGTAAAA+GGG | - | chr7_4:55686959-55686978 | None:intergenic | 25.0% |
| !! | AGTTTTACTGATAAGGTAAA+AGG | - | chr7_4:55686960-55686979 | None:intergenic | 25.0% |
| ! | TAACAGAAAAATGTAACAAG+AGG | - | chr7_4:55687006-55687025 | None:intergenic | 25.0% |
| !!! | TTAAACAAAATTTTGGGTGA+GGG | - | chr7_4:55687170-55687189 | None:intergenic | 25.0% |
| !!! | ATTAAACAAAATTTTGGGTG+AGG | - | chr7_4:55687171-55687190 | None:intergenic | 25.0% |
| ! | ATGATAAATAAAGCATACGA+AGG | - | chr7_4:55687561-55687580 | None:intergenic | 25.0% |
| !! | ATTGATTAATTTTGCAAGCA+AGG | + | chr7_4:55687627-55687646 | Msa1164140:CDS | 25.0% |
| ! | TCAGTAACCAAAATAAAAGA+CGG | - | chr7_4:55687834-55687853 | None:intergenic | 25.0% |
| !!! | GTTTTTTTACTTTGCAAATC+TGG | + | chr7_4:55687887-55687906 | Msa1164140:intron | 25.0% |
| !!! | TTCATGTTCTTTTAAGAGTT+TGG | + | chr7_4:55687931-55687950 | Msa1164140:intron | 25.0% |
| !!! | TTCTTTTAAGAGTTTGGATT+TGG | + | chr7_4:55687937-55687956 | Msa1164140:intron | 25.0% |
| ! | TTCTTCTTGCAAACTATAAA+TGG | + | chr7_4:55688026-55688045 | Msa1164140:intron | 25.0% |
| ! | TCTTCTTGCAAACTATAAAT+GGG | + | chr7_4:55688027-55688046 | Msa1164140:intron | 25.0% |
| ! | CCAAAGGTTTCATAATATAT+TGG | - | chr7_4:55688129-55688148 | None:intergenic | 25.0% |
| ! | CCAATATATTATGAAACCTT+TGG | + | chr7_4:55688126-55688145 | Msa1164140:intron | 25.0% |
| ! | ATATATTATGAAACCTTTGG+AGG | + | chr7_4:55688129-55688148 | Msa1164140:intron | 25.0% |
| !!! | AGGTTTTGAATTACAGTTTA+CGG | + | chr7_4:55688561-55688580 | Msa1164140:intron | 25.0% |
| !!! | GTTGATTTTGAGAAAAGATT+TGG | + | chr7_4:55688595-55688614 | Msa1164140:intron | 25.0% |
| ! | AATGAATATCAACAGACTTA+TGG | - | chr7_4:55688823-55688842 | None:intergenic | 25.0% |
| ! | TTTATTCTGATTGTGATTGT+AGG | + | chr7_4:55688875-55688894 | Msa1164140:intron | 25.0% |
| !!! | GGCTTAAAGTTTTATTTTTC+TGG | + | chr7_4:55688915-55688934 | Msa1164140:CDS | 25.0% |
| ! | TATCTTGAAGATTTAGTTGA+AGG | + | chr7_4:55688963-55688982 | Msa1164140:CDS | 25.0% |
| ! | ATCTTGAAGATTTAGTTGAA+GGG | + | chr7_4:55688964-55688983 | Msa1164140:CDS | 25.0% |
| !! | TCCATTTTTGTGAGTTTTTG+GGG | - | chr7_4:55683404-55683423 | None:intergenic | 30.0% |
| CTCACAAAAATGGAAAATTC+TGG | + | chr7_4:55683410-55683429 | Msa1164140:exon | 30.0% | |
| !! | TTTTGAAAATGAAGCATCCA+TGG | - | chr7_4:55683473-55683492 | None:intergenic | 30.0% |
| TATAATTGACAGTTCCTGTT+TGG | + | chr7_4:55683752-55683771 | Msa1164140:intron | 30.0% | |
| ! | CAGTGTAAACATTTTTACAC+GGG | + | chr7_4:55684066-55684085 | Msa1164140:intron | 30.0% |
| ! | GACAGATATTGGATTTTCAT+TGG | - | chr7_4:55684095-55684114 | None:intergenic | 30.0% |
| AAACTAACCATACATAAGCA+GGG | - | chr7_4:55684124-55684143 | None:intergenic | 30.0% | |
| AAAACTAACCATACATAAGC+AGG | - | chr7_4:55684125-55684144 | None:intergenic | 30.0% | |
| ! | TTTTAATCAGTAGTGTGACA+TGG | + | chr7_4:55684143-55684162 | Msa1164140:intron | 30.0% |
| !! | GTTCCTACTTGTTTAATTTG+TGG | + | chr7_4:55684254-55684273 | Msa1164140:intron | 30.0% |
| TACCCACAAATTAAACAAGT+AGG | - | chr7_4:55684260-55684279 | None:intergenic | 30.0% | |
| GTTGATTAATATGCTTGGTT+TGG | + | chr7_4:55684291-55684310 | Msa1164140:intron | 30.0% | |
| !!! | CACTTTTTCTATGATCTCAA+TGG | + | chr7_4:55684326-55684345 | Msa1164140:intron | 30.0% |
| TATTCCTCAACAAATGCAAA+AGG | - | chr7_4:55684524-55684543 | None:intergenic | 30.0% | |
| !!! | GCTGATTTGACATGTATTTT+TGG | + | chr7_4:55684569-55684588 | Msa1164140:intron | 30.0% |
| ! | TGTAGATAATATGAGGGTTT+TGG | + | chr7_4:55684604-55684623 | Msa1164140:intron | 30.0% |
| AAGCTGAATTGTAAAGAGTT+TGG | - | chr7_4:55684637-55684656 | None:intergenic | 30.0% | |
| !! | TTCAGCTTGTTGTAATAAGA+AGG | + | chr7_4:55684649-55684668 | Msa1164140:CDS | 30.0% |
| TTGTAATAAGAAGGTTGACA+AGG | + | chr7_4:55684658-55684677 | Msa1164140:CDS | 30.0% | |
| GGATTTGTCCTACTAAATAT+GGG | - | chr7_4:55684983-55685002 | None:intergenic | 30.0% | |
| AGGATTTGTCCTACTAAATA+TGG | - | chr7_4:55684984-55685003 | None:intergenic | 30.0% | |
| CTTGGAAATTAAATCTGACA+AGG | + | chr7_4:55685270-55685289 | Msa1164140:CDS | 30.0% | |
| ! | TATTACCTCGGAAATTTTAG+AGG | - | chr7_4:55685371-55685390 | None:intergenic | 30.0% |
| AATAAGAGAATAAGCTCTCA+AGG | - | chr7_4:55685447-55685466 | None:intergenic | 30.0% | |
| TCTATTTGATACTATTTCCC+TGG | + | chr7_4:55685476-55685495 | Msa1164140:intron | 30.0% | |
| ! | TTTTCATGGGGATTTTTTGT+AGG | + | chr7_4:55685499-55685518 | Msa1164140:intron | 30.0% |
| ! | TGCATAAAGTTTGTATTGAC+TGG | + | chr7_4:55685600-55685619 | Msa1164140:CDS | 30.0% |
| !!! | TTCTTGATGTATGTTTTTGG+TGG | + | chr7_4:55685668-55685687 | Msa1164140:intron | 30.0% |
| TATTGAATCCTGATTGATCA+TGG | + | chr7_4:55685709-55685728 | Msa1164140:intron | 30.0% | |
| !! | ATGAAGTTGGTGTTATCTTT+GGG | + | chr7_4:55685805-55685824 | Msa1164140:intron | 30.0% |
| TAAGAATTTGAAAGCAGAAG+TGG | + | chr7_4:55685868-55685887 | Msa1164140:CDS | 30.0% | |
| AACTTAATTGATGCATTCTC+TGG | + | chr7_4:55686097-55686116 | Msa1164140:intron | 30.0% | |
| TACATACAGATGAGATGAAA+CGG | - | chr7_4:55686219-55686238 | None:intergenic | 30.0% | |
| CGTCTGTACATATACTATTA+TGG | - | chr7_4:55686385-55686404 | None:intergenic | 30.0% | |
| !!! | ACTGTTTTTAAGGTTATCTC+TGG | + | chr7_4:55686466-55686485 | Msa1164140:intron | 30.0% |
| ! | TCAGGATGATGGTAAAAAAA+TGG | + | chr7_4:55686530-55686549 | Msa1164140:CDS | 30.0% |
| ! | GGTAAAAAAATGGTTTTCTG+TGG | + | chr7_4:55686540-55686559 | Msa1164140:CDS | 30.0% |
| TGCTCTATCAAATGAAGAAA+AGG | + | chr7_4:55686566-55686585 | Msa1164140:CDS | 30.0% | |
| ! | TGTAGAATAGTGGAATATAG+AGG | + | chr7_4:55686789-55686808 | Msa1164140:intron | 30.0% |
| ! | ATAGAGGTATGAAGAAATTC+AGG | + | chr7_4:55686805-55686824 | Msa1164140:intron | 30.0% |
| ! | TAGAGGTATGAAGAAATTCA+GGG | + | chr7_4:55686806-55686825 | Msa1164140:intron | 30.0% |
| GAAGAAATTCAGGGAATTAT+TGG | + | chr7_4:55686815-55686834 | Msa1164140:intron | 30.0% | |
| TATTTGGCTGAACATGAAAA+TGG | + | chr7_4:55687113-55687132 | Msa1164140:intron | 30.0% | |
| ATTTGGCTGAACATGAAAAT+GGG | + | chr7_4:55687114-55687133 | Msa1164140:intron | 30.0% | |
| !! | TAAACAAAATTTTGGGTGAG+GGG | - | chr7_4:55687169-55687188 | None:intergenic | 30.0% |
| !! | TTTAATGATGATGGTCAACT+AGG | + | chr7_4:55687185-55687204 | Msa1164140:intron | 30.0% |
| !! | TTAATGATGATGGTCAACTA+GGG | + | chr7_4:55687186-55687205 | Msa1164140:intron | 30.0% |
| ! | ATTAATTTTGCAAGCAAGGT+TGG | + | chr7_4:55687631-55687650 | Msa1164140:CDS | 30.0% |
| !! | ATTACATACAGTCCACTTTT+AGG | - | chr7_4:55687777-55687796 | None:intergenic | 30.0% |
| !! | AAGTGGACTGTATGTAATTT+AGG | + | chr7_4:55687779-55687798 | Msa1164140:intron | 30.0% |
| CAGTAACCAAAATAAAAGAC+GGG | - | chr7_4:55687833-55687852 | None:intergenic | 30.0% | |
| GAATTAATGGCTTCTTTCTT+TGG | + | chr7_4:55687865-55687884 | Msa1164140:intron | 30.0% | |
| GAATCGGTGAATATGAAATT+GGG | + | chr7_4:55688173-55688192 | Msa1164140:intron | 30.0% | |
| ACAATATCATCATTATCGTG+TGG | + | chr7_4:55688228-55688247 | Msa1164140:intron | 30.0% | |
| CAATATCATCATTATCGTGT+GGG | + | chr7_4:55688229-55688248 | Msa1164140:intron | 30.0% | |
| CAAGCATGAAAATCATGTTA+CGG | - | chr7_4:55688255-55688274 | None:intergenic | 30.0% | |
| AAATTGATCTTGACAACCAA+GGG | + | chr7_4:55688404-55688423 | Msa1164140:CDS | 30.0% | |
| CAATGCAAATGATATTTGCA+AGG | - | chr7_4:55688513-55688532 | None:intergenic | 30.0% | |
| GAGAAAAGATTTGGACATAT+AGG | + | chr7_4:55688604-55688623 | Msa1164140:intron | 30.0% | |
| ! | AGTTGCGGAATTTAAAATCT+TGG | + | chr7_4:55688688-55688707 | Msa1164140:intron | 30.0% |
| ATCAAGATATTTCAGTTGCA+AGG | - | chr7_4:55688741-55688760 | None:intergenic | 30.0% | |
| TTGCAACTGAAATATCTTGA+TGG | + | chr7_4:55688740-55688759 | Msa1164140:intron | 30.0% | |
| TAGTGAGCTAAAAAGAAAGA+TGG | - | chr7_4:55688772-55688791 | None:intergenic | 30.0% | |
| TCTTGAAGATTTAGTTGAAG+GGG | + | chr7_4:55688965-55688984 | Msa1164140:CDS | 30.0% | |
| TTGAACAACCTATTAAAGGA+TGG | - | chr7_4:55689247-55689266 | None:intergenic | 30.0% | |
| ACAGTTGAACAACCTATTAA+AGG | - | chr7_4:55689251-55689270 | None:intergenic | 30.0% | |
| TTAATAGGTTGTTCAACTGT+TGG | + | chr7_4:55689251-55689270 | Msa1164140:three_prime_UTR | 30.0% | |
| AGTCAATTACTGCATGTAAA+TGG | + | chr7_4:55689291-55689310 | Msa1164140:three_prime_UTR | 30.0% | |
| ATTACTGCATGTAAATGGAA+TGG | + | chr7_4:55689296-55689315 | Msa1164140:three_prime_UTR | 30.0% | |
| !! | TGTGAGTTTTTGGGGATTTT+TGG | - | chr7_4:55683396-55683415 | None:intergenic | 35.0% |
| TCCCCAAAAACTCACAAAAA+TGG | + | chr7_4:55683400-55683419 | Msa1164140:exon | 35.0% | |
| !!! | AATACCTTTTTGAGAGCACT+TGG | - | chr7_4:55683820-55683839 | None:intergenic | 35.0% |
| GATTGTGAATATGATCTCCA+TGG | + | chr7_4:55684358-55684377 | Msa1164140:intron | 35.0% | |
| TTGCAATCAACACATAACCA+TGG | - | chr7_4:55684378-55684397 | None:intergenic | 35.0% | |
| GTTGATTGCAAATTTATGGG+TGG | + | chr7_4:55684387-55684406 | Msa1164140:intron | 35.0% | |
| ATTTATGGGTGGCAGATATT+AGG | + | chr7_4:55684398-55684417 | Msa1164140:intron | 35.0% | |
| ! | TATTAGGCATTTGCCTTTTG+TGG | + | chr7_4:55684414-55684433 | Msa1164140:CDS | 35.0% |
| !! | GTTTCCTTTTGCATTTGTTG+AGG | + | chr7_4:55684517-55684536 | Msa1164140:intron | 35.0% |
| TTGGTAAGAATCTCCAATCT+GGG | + | chr7_4:55684717-55684736 | Msa1164140:CDS | 35.0% | |
| CATTCATCTTAATCCCAGAT+TGG | - | chr7_4:55684733-55684752 | None:intergenic | 35.0% | |
| ! | CAATCTGGGATTAAGATGAA+TGG | + | chr7_4:55684731-55684750 | Msa1164140:CDS | 35.0% |
| TAAGATGAATGGTAAAGCCA+AGG | + | chr7_4:55684742-55684761 | Msa1164140:CDS | 35.0% | |
| TTGAAATGTCTTGCAAGAGA+GGG | + | chr7_4:55684768-55684787 | Msa1164140:CDS | 35.0% | |
| CTTTGGTATCACAAAATGGA+GGG | - | chr7_4:55684865-55684884 | None:intergenic | 35.0% | |
| GAACCTTTGGTATCACAAAA+TGG | - | chr7_4:55684869-55684888 | None:intergenic | 35.0% | |
| TTGATCACTGCAACCATTAT+CGG | - | chr7_4:55684891-55684910 | None:intergenic | 35.0% | |
| AGCAACTTCCCATATTTAGT+AGG | + | chr7_4:55684972-55684991 | Msa1164140:intron | 35.0% | |
| ATAAGATGCCAAACTGAAAG+AGG | - | chr7_4:55685004-55685023 | None:intergenic | 35.0% | |
| TTGAAAAGATCAAGCACAAC+AGG | + | chr7_4:55685079-55685098 | Msa1164140:CDS | 35.0% | |
| AAGAAAGAATGCCTCATTTC+TGG | + | chr7_4:55685116-55685135 | Msa1164140:CDS | 35.0% | |
| !! | CACAAGCTTGTTATGATATG+AGG | - | chr7_4:55685236-55685255 | None:intergenic | 35.0% |
| CTCATATCATAACAAGCTTG+TGG | + | chr7_4:55685234-55685253 | Msa1164140:CDS | 35.0% | |
| ! | TTTAATTTCCAAGTCACAGC+AGG | - | chr7_4:55685263-55685282 | None:intergenic | 35.0% |
| ATTAAATCTGACAAGGACAC+TGG | + | chr7_4:55685277-55685296 | Msa1164140:CDS | 35.0% | |
| ACGAACAAATGCTTGTACTT+GGG | - | chr7_4:55685339-55685358 | None:intergenic | 35.0% | |
| AACGAACAAATGCTTGTACT+TGG | - | chr7_4:55685340-55685359 | None:intergenic | 35.0% | |
| AGAATAAGCTCTCAAGGAAA+GGG | - | chr7_4:55685441-55685460 | None:intergenic | 35.0% | |
| !! | TACTATTTCCCTGGTTTTCA+TGG | + | chr7_4:55685485-55685504 | Msa1164140:intron | 35.0% |
| !! | ACTATTTCCCTGGTTTTCAT+GGG | + | chr7_4:55685486-55685505 | Msa1164140:intron | 35.0% |
| AAAAATCCCCATGAAAACCA+GGG | - | chr7_4:55685496-55685515 | None:intergenic | 35.0% | |
| AAAAAATCCCCATGAAAACC+AGG | - | chr7_4:55685497-55685516 | None:intergenic | 35.0% | |
| TTATGCACATGCACAACATT+TGG | - | chr7_4:55685587-55685606 | None:intergenic | 35.0% | |
| TGAACAATCCATGATCAATC+AGG | - | chr7_4:55685720-55685739 | None:intergenic | 35.0% | |
| TAGAATTTGGCTGATGAAGT+TGG | + | chr7_4:55685792-55685811 | Msa1164140:intron | 35.0% | |
| !! | GATGAAGTTGGTGTTATCTT+TGG | + | chr7_4:55685804-55685823 | Msa1164140:intron | 35.0% |
| TCACCAACAAAATACACTTG+TGG | - | chr7_4:55685842-55685861 | None:intergenic | 35.0% | |
| AAGCTTAAATGCACCAAATG+CGG | + | chr7_4:55685902-55685921 | Msa1164140:CDS | 35.0% | |
| TTATCATGTTCCTTGTGCAA+TGG | + | chr7_4:55685973-55685992 | Msa1164140:CDS | 35.0% | |
| ACATACAGATGAGATGAAAC+GGG | - | chr7_4:55686218-55686237 | None:intergenic | 35.0% | |
| TGACTGCTTATTTCAATCGA+AGG | + | chr7_4:55686351-55686370 | Msa1164140:intron | 35.0% | |
| !! | AATTGGTTTGACTGTTGAGA+TGG | - | chr7_4:55686501-55686520 | None:intergenic | 35.0% |
| ATCTCAACAGTCAAACCAAT+TGG | + | chr7_4:55686500-55686519 | Msa1164140:CDS | 35.0% | |
| TCTCAACAGTCAAACCAATT+GGG | + | chr7_4:55686501-55686520 | Msa1164140:CDS | 35.0% | |
| TGCACAACAAATTTCTGATG+TGG | + | chr7_4:55686723-55686742 | Msa1164140:intron | 35.0% | |
| TGGTGAGTAAGCTTCTTATA+AGG | + | chr7_4:55686835-55686854 | Msa1164140:intron | 35.0% | |
| GGTGAGTAAGCTTCTTATAA+GGG | + | chr7_4:55686836-55686855 | Msa1164140:intron | 35.0% | |
| GTGAGTAAGCTTCTTATAAG+GGG | + | chr7_4:55686837-55686856 | Msa1164140:intron | 35.0% | |
| ! | ATAAGGGGCATAATCATGAA+TGG | + | chr7_4:55686852-55686871 | Msa1164140:intron | 35.0% |
| ! | TAAGGGGCATAATCATGAAT+GGG | + | chr7_4:55686853-55686872 | Msa1164140:intron | 35.0% |
| !!! | AGGAGCTAGTTTTACTGATA+AGG | - | chr7_4:55686967-55686986 | None:intergenic | 35.0% |
| ACCTAGCTGATACTTCTATT+TGG | + | chr7_4:55687097-55687116 | Msa1164140:intron | 35.0% | |
| !! | CAGGACATTGAAAGTTTTGA+GGG | + | chr7_4:55687729-55687748 | Msa1164140:CDS | 35.0% |
| !! | TTGATGCCCGTCTTTTATTT+TGG | + | chr7_4:55687824-55687843 | Msa1164140:intron | 35.0% |
| TTGGTAGAAGACTTTCCATT+TGG | + | chr7_4:55687956-55687975 | Msa1164140:intron | 35.0% | |
| TGGTAGAAGACTTTCCATTT+GGG | + | chr7_4:55687957-55687976 | Msa1164140:intron | 35.0% | |
| ! | TATTATGAAACCTTTGGAGG+TGG | + | chr7_4:55688132-55688151 | Msa1164140:intron | 35.0% |
| ! | ATTATGAAACCTTTGGAGGT+GGG | + | chr7_4:55688133-55688152 | Msa1164140:intron | 35.0% |
| GGAATCGGTGAATATGAAAT+TGG | + | chr7_4:55688172-55688191 | Msa1164140:intron | 35.0% | |
| TTCTACCTATCTTCTACTGT+AGG | + | chr7_4:55688331-55688350 | Msa1164140:intron | 35.0% | |
| TCTACCTATCTTCTACTGTA+GGG | + | chr7_4:55688332-55688351 | Msa1164140:intron | 35.0% | |
| TTATCCCTACAGTAGAAGAT+AGG | - | chr7_4:55688339-55688358 | None:intergenic | 35.0% | |
| GAAATTGATCTTGACAACCA+AGG | + | chr7_4:55688403-55688422 | Msa1164140:CDS | 35.0% | |
| AATATCAAGTGTCTTGCTCA+AGG | + | chr7_4:55688541-55688560 | Msa1164140:intron | 35.0% | |
| AATTGCAACATCTAGGTTTG+TGG | - | chr7_4:55688666-55688685 | None:intergenic | 35.0% | |
| CAACTGAAATTGCAACATCT+AGG | - | chr7_4:55688673-55688692 | None:intergenic | 35.0% | |
| AGATGTTGCAATTTCAGTTG+CGG | + | chr7_4:55688673-55688692 | Msa1164140:intron | 35.0% | |
| GATATTTCAGTTGCAAGGAA+AGG | - | chr7_4:55688736-55688755 | None:intergenic | 35.0% | |
| GAATATCAACAGACTTATGG+AGG | - | chr7_4:55688820-55688839 | None:intergenic | 35.0% | |
| TTTAAGCCACTGAATAGCTT+TGG | - | chr7_4:55688903-55688922 | None:intergenic | 35.0% | |
| CTTGAAGATTTAGTTGAAGG+GGG | + | chr7_4:55688966-55688985 | Msa1164140:CDS | 35.0% | |
| TTTGAAAAGCAAGGATGACT+TGG | + | chr7_4:55689001-55689020 | Msa1164140:CDS | 35.0% | |
| TGGAAGAGATGCAAATTTGT+TGG | + | chr7_4:55689028-55689047 | Msa1164140:CDS | 35.0% | |
| AGGACGAAGTTTCAATTCTT+TGG | + | chr7_4:55689090-55689109 | Msa1164140:CDS | 35.0% | |
| AATTTAACTGCCAATACTGC+TGG | + | chr7_4:55689134-55689153 | Msa1164140:CDS | 35.0% | |
| GAGTGCATTTAGCTAACAAA+AGG | - | chr7_4:55689203-55689222 | None:intergenic | 35.0% | |
| TTGTCCATCCATCCTTTAAT+AGG | + | chr7_4:55689236-55689255 | Msa1164140:three_prime_UTR | 35.0% | |
| ACAACCTATTAAAGGATGGA+TGG | - | chr7_4:55689243-55689262 | None:intergenic | 35.0% | |
| GTGTTTATTTGCAGAAGATC+TGG | + | chr7_4:55689366-55689385 | Msa1164140:three_prime_UTR | 35.0% | |
| ! | AGATCTGGTCTATTTTGTAC+AGG | + | chr7_4:55689381-55689400 | Msa1164140:three_prime_UTR | 35.0% |
| !!! | TTGGGGATTTTTGGAGTTCT+CGG | - | chr7_4:55683387-55683406 | None:intergenic | 40.0% |
| CTTGAACTCGTTCAAGAAAC+CGG | + | chr7_4:55683614-55683633 | Msa1164140:CDS | 40.0% | |
| TGATTGCATGGCAACAAAAC+CGG | - | chr7_4:55683636-55683655 | None:intergenic | 40.0% | |
| CTGCAGAACAAATGATTGCA+TGG | - | chr7_4:55683648-55683667 | None:intergenic | 40.0% | |
| CATGCAATCATTTGTTCTGC+AGG | + | chr7_4:55683646-55683665 | Msa1164140:CDS | 40.0% | |
| AATTGACAGTTCCTGTTTGG+CGG | + | chr7_4:55683755-55683774 | Msa1164140:intron | 40.0% | |
| AACACCAAGTGCTCTCAAAA+AGG | + | chr7_4:55683813-55683832 | Msa1164140:CDS | 40.0% | |
| CAGGGTGATATGACAGATAT+TGG | - | chr7_4:55684106-55684125 | None:intergenic | 40.0% | |
| CATATCACCCTGCTTATGTA+TGG | + | chr7_4:55684114-55684133 | Msa1164140:intron | 40.0% | |
| AGTAGTGTGACATGGACAAA+TGG | + | chr7_4:55684151-55684170 | Msa1164140:intron | 40.0% | |
| GACAAATGGTGGTTTCTTGT+TGG | + | chr7_4:55684165-55684184 | Msa1164140:intron | 40.0% | |
| TCATGTATGTCGAATGAAGC+TGG | + | chr7_4:55684692-55684711 | Msa1164140:CDS | 40.0% | |
| CATGTATGTCGAATGAAGCT+GGG | + | chr7_4:55684693-55684712 | Msa1164140:CDS | 40.0% | |
| ATGTATGTCGAATGAAGCTG+GGG | + | chr7_4:55684694-55684713 | Msa1164140:CDS | 40.0% | |
| ! | GTTGGTAAGAATCTCCAATC+TGG | + | chr7_4:55684716-55684735 | Msa1164140:CDS | 40.0% |
| GTTGAAATGTCTTGCAAGAG+AGG | + | chr7_4:55684767-55684786 | Msa1164140:CDS | 40.0% | |
| TGAAATGTCTTGCAAGAGAG+GGG | + | chr7_4:55684769-55684788 | Msa1164140:CDS | 40.0% | |
| CCTTTGGTATCACAAAATGG+AGG | - | chr7_4:55684866-55684885 | None:intergenic | 40.0% | |
| ! | CCTCCATTTTGTGATACCAA+AGG | + | chr7_4:55684863-55684882 | Msa1164140:CDS | 40.0% |
| GATACCAAAGGTTCCGATAA+TGG | + | chr7_4:55684875-55684894 | Msa1164140:CDS | 40.0% | |
| GGACAAATCCTCTTTCAGTT+TGG | + | chr7_4:55684993-55685012 | Msa1164140:intron | 40.0% | |
| AGATCAAGCACAACAGGAAA+AGG | + | chr7_4:55685085-55685104 | Msa1164140:CDS | 40.0% | |
| GAACTTTCAGACCAGAAATG+AGG | - | chr7_4:55685130-55685149 | None:intergenic | 40.0% | |
| !! | AAGTCACTTGGTGCATTTGA+AGG | - | chr7_4:55685313-55685332 | None:intergenic | 40.0% |
| !! | TCAGTCCTCTAAAATTTCCG+AGG | + | chr7_4:55685363-55685382 | Msa1164140:CDS | 40.0% |
| AATAAGCTCTCAAGGAAAGG+GGG | - | chr7_4:55685439-55685458 | None:intergenic | 40.0% | |
| GAATAAGCTCTCAAGGAAAG+GGG | - | chr7_4:55685440-55685459 | None:intergenic | 40.0% | |
| GAGAATAAGCTCTCAAGGAA+AGG | - | chr7_4:55685442-55685461 | None:intergenic | 40.0% | |
| !! | CTATTTCCCTGGTTTTCATG+GGG | + | chr7_4:55685487-55685506 | Msa1164140:intron | 40.0% |
| !!! | GGGATTTTTTGTAGGCTACT+GGG | + | chr7_4:55685507-55685526 | Msa1164140:intron | 40.0% |
| TCAATGCTGCATTATGCAAG+TGG | + | chr7_4:55685530-55685549 | Msa1164140:CDS | 40.0% | |
| CAATGCTGCATTATGCAAGT+GGG | + | chr7_4:55685531-55685550 | Msa1164140:CDS | 40.0% | |
| TGCAAGTGGGATTTCAGTTA+CGG | + | chr7_4:55685544-55685563 | Msa1164140:CDS | 40.0% | |
| CAATGCATACACAGGATATC+AGG | - | chr7_4:55685634-55685653 | None:intergenic | 40.0% | |
| TGGTGGAATCGATCTGAAAA+CGG | + | chr7_4:55685685-55685704 | Msa1164140:intron | 40.0% | |
| ! | GCACCACAAGTGTATTTTGT+TGG | + | chr7_4:55685836-55685855 | Msa1164140:CDS | 40.0% |
| ATGCACCAAATGCGGTAAAA+AGG | + | chr7_4:55685910-55685929 | Msa1164140:CDS | 40.0% | |
| TGCACCAAATGCGGTAAAAA+GGG | + | chr7_4:55685911-55685930 | Msa1164140:CDS | 40.0% | |
| AAAGATGTACATGATCCCAG+CGG | - | chr7_4:55686012-55686031 | None:intergenic | 40.0% | |
| ! | ATTGATGCATTCTCTGGTTC+AGG | + | chr7_4:55686103-55686122 | Msa1164140:intron | 40.0% |
| ! | AAACCAATTGGGAGCTTTTC+AGG | + | chr7_4:55686512-55686531 | Msa1164140:CDS | 40.0% |
| CAGTTCCTCTGATAGACTAA+CGG | + | chr7_4:55686645-55686664 | Msa1164140:intron | 40.0% | |
| AGTTCCTCTGATAGACTAAC+GGG | + | chr7_4:55686646-55686665 | Msa1164140:intron | 40.0% | |
| CAAATTTCTGATGTGGTGAG+TGG | + | chr7_4:55686730-55686749 | Msa1164140:intron | 40.0% | |
| !!! | TAGCTCCTCACTTTTTCTTG+TGG | + | chr7_4:55686979-55686998 | Msa1164140:intron | 40.0% |
| TAGTCATCTCTTCAACGTGT+TGG | - | chr7_4:55687073-55687092 | None:intergenic | 40.0% | |
| AACACGTTGAAGAGATGACT+AGG | + | chr7_4:55687072-55687091 | Msa1164140:intron | 40.0% | |
| ACACGTTGAAGAGATGACTA+GGG | + | chr7_4:55687073-55687092 | Msa1164140:intron | 40.0% | |
| !! | GCCAAATAGAAGTATCAGCT+AGG | - | chr7_4:55687101-55687120 | None:intergenic | 40.0% |
| AGTGAGAGGCCTTAAATTGA+TGG | + | chr7_4:55687209-55687228 | Msa1164140:intron | 40.0% | |
| !! | ATTTATCCTCTTGATGGTGC+AGG | + | chr7_4:55687600-55687619 | Msa1164140:intron | 40.0% |
| CCTCAAAACTTTCAATGTCC+TGG | - | chr7_4:55687731-55687750 | None:intergenic | 40.0% | |
| ! | CCAGGACATTGAAAGTTTTG+AGG | + | chr7_4:55687728-55687747 | Msa1164140:CDS | 40.0% |
| !!! | GTTTTGAGGGCGATTCTAAA+TGG | + | chr7_4:55687742-55687761 | Msa1164140:CDS | 40.0% |
| TGGACAATGGATCCTAAAAG+TGG | + | chr7_4:55687762-55687781 | Msa1164140:CDS | 40.0% | |
| GGTAGAAGACTTTCCATTTG+GGG | + | chr7_4:55687958-55687977 | Msa1164140:intron | 40.0% | |
| GTAGAAGACTTTCCATTTGG+GGG | + | chr7_4:55687959-55687978 | Msa1164140:intron | 40.0% | |
| TTTCCATTTGGGGGAACAAA+GGG | + | chr7_4:55687968-55687987 | Msa1164140:intron | 40.0% | |
| !! | TCATATTCACCGATTCCTCA+GGG | - | chr7_4:55688169-55688188 | None:intergenic | 40.0% |
| !! | TTCATATTCACCGATTCCTC+AGG | - | chr7_4:55688170-55688189 | None:intergenic | 40.0% |
| CGGTGAATATGAAATTGGGA+TGG | + | chr7_4:55688177-55688196 | Msa1164140:intron | 40.0% | |
| TTGGACATATAGGAGTGACT+AGG | + | chr7_4:55688614-55688633 | Msa1164140:intron | 40.0% | |
| ACTAGGTTTCTGTTTCAACG+TGG | + | chr7_4:55688631-55688650 | Msa1164140:intron | 40.0% | |
| !!! | AGGTGTCGTTTTGAAAAGCA+AGG | + | chr7_4:55688992-55689011 | Msa1164140:CDS | 40.0% |
| AGGATGGATGGACAAAACAT+CGG | - | chr7_4:55689231-55689250 | None:intergenic | 40.0% | |
| AGTGTGACATGGACAAATGG+TGG | + | chr7_4:55684154-55684173 | Msa1164140:intron | 45.0% | |
| ! | GCTTTTCAGCAACGTTCTTC+TGG | + | chr7_4:55684487-55684506 | Msa1164140:CDS | 45.0% |
| GATGAATGGTAAAGCCAAGG+AGG | + | chr7_4:55684745-55684764 | Msa1164140:CDS | 45.0% | |
| GCAAGACATTTCAACCTCCT+TGG | - | chr7_4:55684762-55684781 | None:intergenic | 45.0% | |
| GAAATGTCTTGCAAGAGAGG+GGG | + | chr7_4:55684770-55684789 | Msa1164140:CDS | 45.0% | |
| GCAACCATTATCGGAACCTT+TGG | - | chr7_4:55684882-55684901 | None:intergenic | 45.0% | |
| CAGTGATCAAAACAGCGAGA+AGG | + | chr7_4:55684901-55684920 | Msa1164140:CDS | 45.0% | |
| TCATTTCAGCCACTCAGTCT+TGG | + | chr7_4:55685037-55685056 | Msa1164140:intron | 45.0% | |
| CATTTCAGCCACTCAGTCTT+GGG | + | chr7_4:55685038-55685057 | Msa1164140:intron | 45.0% | |
| ! | AAGTTCTGCCTCTGAAAACG+AGG | + | chr7_4:55685144-55685163 | Msa1164140:CDS | 45.0% |
| ! | CGTAAGATCCTCGTTTTCAG+AGG | - | chr7_4:55685155-55685174 | None:intergenic | 45.0% |
| GTACTTGGGTACAAGTCACT+TGG | - | chr7_4:55685325-55685344 | None:intergenic | 45.0% | |
| !!! | GGGGATTTTTTGTAGGCTAC+TGG | + | chr7_4:55685506-55685525 | Msa1164140:intron | 45.0% |
| GCAAGTGGGATTTCAGTTAC+GGG | + | chr7_4:55685545-55685564 | Msa1164140:CDS | 45.0% | |
| ! | GTGTTATCTTTGGGAACCCA+GGG | + | chr7_4:55685814-55685833 | Msa1164140:intron | 45.0% |
| AAATACACTTGTGGTGCCCT+GGG | - | chr7_4:55685833-55685852 | None:intergenic | 45.0% | |
| AAAATACACTTGTGGTGCCC+TGG | - | chr7_4:55685834-55685853 | None:intergenic | 45.0% | |
| ATTTGAAAGCAGAAGTGGCC+CGG | + | chr7_4:55685873-55685892 | Msa1164140:CDS | 45.0% | |
| TGCATTTAAGCTTTGCTCCC+CGG | - | chr7_4:55685895-55685914 | None:intergenic | 45.0% | |
| ! | AGCTCCCTTTTTACCGCATT+TGG | - | chr7_4:55685918-55685937 | None:intergenic | 45.0% |
| !! | AAGGTTATCTCTGGTGCTGT+AGG | + | chr7_4:55686475-55686494 | Msa1164140:intron | 45.0% |
| CATCCTGAAAAGCTCCCAAT+TGG | - | chr7_4:55686518-55686537 | None:intergenic | 45.0% | |
| !! | TTGGGAGCTTTTCAGGATGA+TGG | + | chr7_4:55686519-55686538 | Msa1164140:CDS | 45.0% |
| !! | TGGGGGTATTGAGAATGTTC+AGG | + | chr7_4:55686680-55686699 | Msa1164140:intron | 45.0% |
| !! | GGGGGTATTGAGAATGTTCA+GGG | + | chr7_4:55686681-55686700 | Msa1164140:intron | 45.0% |
| TTTCTGATGTGGTGAGTGGA+AGG | + | chr7_4:55686734-55686753 | Msa1164140:intron | 45.0% | |
| TTCTGATGTGGTGAGTGGAA+GGG | + | chr7_4:55686735-55686754 | Msa1164140:intron | 45.0% | |
| CTGATAAGGTAAAAGGGGAC+TGG | - | chr7_4:55686953-55686972 | None:intergenic | 45.0% | |
| GAGGTCCACAAGAAAAAGTG+AGG | - | chr7_4:55686987-55687006 | None:intergenic | 45.0% | |
| !! | CAAAATTTTGGGTGAGGGGA+TGG | - | chr7_4:55687165-55687184 | None:intergenic | 45.0% |
| GATCACATGTGTGACATCTG+AGG | - | chr7_4:55687680-55687699 | None:intergenic | 45.0% | |
| ATCGCAGCAACTGATGCAAA+TGG | + | chr7_4:55687697-55687716 | Msa1164140:CDS | 45.0% | |
| GGGCGATTCTAAATGGACAA+TGG | + | chr7_4:55687749-55687768 | Msa1164140:CDS | 45.0% | |
| CTTTCCATTTGGGGGAACAA+AGG | + | chr7_4:55687967-55687986 | Msa1164140:intron | 45.0% | |
| ATTCCCTTTGTTCCCCCAAA+TGG | - | chr7_4:55687974-55687993 | None:intergenic | 45.0% | |
| TAGGAGCCAAAGCTATTCAG+TGG | + | chr7_4:55688894-55688913 | Msa1164140:intron | 45.0% | |
| GAAGATTTAGTTGAAGGGGG+AGG | + | chr7_4:55688969-55688988 | Msa1164140:CDS | 45.0% | |
| ! | AGCAAGGATGACTTGGAAGT+TGG | + | chr7_4:55689008-55689027 | Msa1164140:CDS | 45.0% |
| TACAATCTTGATCCCCCAGA+AGG | + | chr7_4:55689056-55689075 | Msa1164140:CDS | 45.0% | |
| ! | GATGGACAAAACATCGGCTA+CGG | - | chr7_4:55689225-55689244 | None:intergenic | 45.0% |
| GTTCAACTGTTGGTCACATG+TGG | + | chr7_4:55689261-55689280 | Msa1164140:three_prime_UTR | 45.0% | |
| TGTTGGTCACATGTGGATTC+TGG | + | chr7_4:55689268-55689287 | Msa1164140:three_prime_UTR | 45.0% | |
| !! | TAAATAAATAAATAAACTTT+AGG | - | chr7_4:55683915-55683934 | None:intergenic | 5.0% |
| !! | TTTAATAAAATTTAATTATG+GGG | - | chr7_4:55688053-55688072 | None:intergenic | 5.0% |
| TCGAACTCAAATGCCCTCTC+TGG | + | chr7_4:55683501-55683520 | Msa1164140:CDS | 50.0% | |
| GTGGGAATACGTACCAGAGA+GGG | - | chr7_4:55683517-55683536 | None:intergenic | 50.0% | |
| AGTGGGAATACGTACCAGAG+AGG | - | chr7_4:55683518-55683537 | None:intergenic | 50.0% | |
| ! | CGAAGTACTATCCGCCAAAC+AGG | - | chr7_4:55683769-55683788 | None:intergenic | 50.0% |
| ATGTCGAATGAAGCTGGGGT+TGG | + | chr7_4:55684698-55684717 | Msa1164140:CDS | 50.0% | |
| AATCGGGCTTCTCTGCAATG+TGG | - | chr7_4:55684802-55684821 | None:intergenic | 50.0% | |
| TCACAAAATGGAGGGCTGTC+TGG | - | chr7_4:55684857-55684876 | None:intergenic | 50.0% | |
| TGTGGATTCCTGCTGTGACT+TGG | + | chr7_4:55685252-55685271 | Msa1164140:CDS | 50.0% | |
| CAAGGAAAGGGGGTGACAAT+AGG | - | chr7_4:55685429-55685448 | None:intergenic | 50.0% | |
| TGGGATTTCAGTTACGGGAG+AGG | + | chr7_4:55685550-55685569 | Msa1164140:CDS | 50.0% | |
| ! | GGTGTTATCTTTGGGAACCC+AGG | + | chr7_4:55685813-55685832 | Msa1164140:intron | 50.0% |
| TTTGAAAGCAGAAGTGGCCC+GGG | + | chr7_4:55685874-55685893 | Msa1164140:CDS | 50.0% | |
| GCATTTAAGCTTTGCTCCCC+GGG | - | chr7_4:55685894-55685913 | None:intergenic | 50.0% | |
| GGTAAAAAGGGAGCTGCTCT+TGG | + | chr7_4:55685923-55685942 | Msa1164140:CDS | 50.0% | |
| GCAGAGATGTCCATTGCACA+AGG | - | chr7_4:55685986-55686005 | None:intergenic | 50.0% | |
| ! | GATGCATTCTCTGGTTCAGG+TGG | + | chr7_4:55686106-55686125 | Msa1164140:intron | 50.0% |
| ! | CACACCCGTTAGTCTATCAG+AGG | - | chr7_4:55686653-55686672 | None:intergenic | 50.0% |
| ! | CTGATAGACTAACGGGTGTG+AGG | + | chr7_4:55686653-55686672 | Msa1164140:intron | 50.0% |
| ! | ATAGACTAACGGGTGTGAGG+AGG | + | chr7_4:55686656-55686675 | Msa1164140:intron | 50.0% |
| TCTGATGTGGTGAGTGGAAG+GGG | + | chr7_4:55686736-55686755 | Msa1164140:intron | 50.0% | |
| CCTTCACTGGAAAGGGATTC+AGG | - | chr7_4:55686928-55686947 | None:intergenic | 50.0% | |
| CCTGAATCCCTTTCCAGTGA+AGG | + | chr7_4:55686925-55686944 | Msa1164140:intron | 50.0% | |
| ! | ACTGGCTCCTTCACTGGAAA+GGG | - | chr7_4:55686935-55686954 | None:intergenic | 50.0% |
| ATGGTCAACTAGGGAGTGAG+AGG | + | chr7_4:55687195-55687214 | Msa1164140:intron | 50.0% | |
| ATAGCACCTGCACCATCAAG+AGG | - | chr7_4:55687609-55687628 | None:intergenic | 50.0% | |
| GTGCTACAGTGTCCAAGTGT+TGG | + | chr7_4:55687653-55687672 | Msa1164140:CDS | 50.0% | |
| ! | GACATCTGAGGTCCAACACT+TGG | - | chr7_4:55687668-55687687 | None:intergenic | 50.0% |
| ATGCAAATGGAGCATGCTCC+AGG | + | chr7_4:55687710-55687729 | Msa1164140:CDS | 50.0% | |
| !! | CTTTGGAGGTGGGTGCTATT+GGG | + | chr7_4:55688143-55688162 | Msa1164140:intron | 50.0% |
| !! | CTTGACAACCAAGGGTGTCA+AGG | + | chr7_4:55688412-55688431 | Msa1164140:CDS | 50.0% |
| ! | CCCTAAGTCTGCCAGCTTTT+GGG | - | chr7_4:55688441-55688460 | None:intergenic | 50.0% |
| CCCAAAAGCTGGCAGACTTA+GGG | + | chr7_4:55688438-55688457 | Msa1164140:CDS | 50.0% | |
| GATTTAGTTGAAGGGGGAGG+AGG | + | chr7_4:55688972-55688991 | Msa1164140:CDS | 50.0% | |
| ! | GGCATGCTATGTAGCACTGA+TGG | + | chr7_4:55689472-55689491 | Msa1164140:three_prime_UTR | 50.0% |
| TTCAGCCACTCAGTCTTGGG+AGG | + | chr7_4:55685041-55685060 | Msa1164140:intron | 55.0% | |
| TCAGACCTCCCAAGACTGAG+TGG | - | chr7_4:55685049-55685068 | None:intergenic | 55.0% | |
| AGTTACGGGAGAGGCTGCAA+TGG | + | chr7_4:55685559-55685578 | Msa1164140:CDS | 55.0% | |
| TTGAAAGCAGAAGTGGCCCG+GGG | + | chr7_4:55685875-55685894 | Msa1164140:CDS | 55.0% | |
| ! | ACTAACGGGTGTGAGGAGGA+TGG | + | chr7_4:55686660-55686679 | Msa1164140:intron | 55.0% |
| ! | CTAACGGGTGTGAGGAGGAT+GGG | + | chr7_4:55686661-55686680 | Msa1164140:intron | 55.0% |
| ! | TAACGGGTGTGAGGAGGATG+GGG | + | chr7_4:55686662-55686681 | Msa1164140:intron | 55.0% |
| CTGATGTGGTGAGTGGAAGG+GGG | + | chr7_4:55686737-55686756 | Msa1164140:intron | 55.0% | |
| TGATGTGGTGAGTGGAAGGG+GGG | + | chr7_4:55686738-55686757 | Msa1164140:intron | 55.0% | |
| ! | GACTGGCTCCTTCACTGGAA+AGG | - | chr7_4:55686936-55686955 | None:intergenic | 55.0% |
| CCAATAGCACCCACCTCCAA+AGG | - | chr7_4:55688145-55688164 | None:intergenic | 55.0% | |
| ! | CCTTTGGAGGTGGGTGCTAT+TGG | + | chr7_4:55688142-55688161 | Msa1164140:intron | 55.0% |
| GCTATTGGGCCCTGAGGAAT+CGG | + | chr7_4:55688157-55688176 | Msa1164140:intron | 55.0% | |
| !! | GACAACCAAGGGTGTCAAGG+TGG | + | chr7_4:55688415-55688434 | Msa1164140:CDS | 55.0% |
| TGTCAAGGTGGCCCAAAAGC+TGG | + | chr7_4:55688427-55688446 | Msa1164140:CDS | 55.0% | |
| GCCCAAAAGCTGGCAGACTT+AGG | + | chr7_4:55688437-55688456 | Msa1164140:CDS | 55.0% | |
| ! | GCCCTAAGTCTGCCAGCTTT+TGG | - | chr7_4:55688442-55688461 | None:intergenic | 55.0% |
| AGCTGGCAGACTTAGGGCAT+TGG | + | chr7_4:55688444-55688463 | Msa1164140:CDS | 55.0% | |
| TCCAGCTCACATCCTTCTGG+GGG | - | chr7_4:55689071-55689090 | None:intergenic | 55.0% | |
| CTCCAGCTCACATCCTTCTG+GGG | - | chr7_4:55689072-55689091 | None:intergenic | 55.0% | |
| CCTCCAGCTCACATCCTTCT+GGG | - | chr7_4:55689073-55689092 | None:intergenic | 55.0% | |
| TCCTCCAGCTCACATCCTTC+TGG | - | chr7_4:55689074-55689093 | None:intergenic | 55.0% | |
| CCACGTGTGACCAGCAGTAT+TGG | - | chr7_4:55689147-55689166 | None:intergenic | 55.0% | |
| CCAATACTGCTGGTCACACG+TGG | + | chr7_4:55689144-55689163 | Msa1164140:CDS | 55.0% | |
| TGGACATCTCTGCTTGCCGC+TGG | + | chr7_4:55685993-55686012 | Msa1164140:CDS | 60.0% | |
| GGACATCTCTGCTTGCCGCT+GGG | + | chr7_4:55685994-55686013 | Msa1164140:CDS | 60.0% | |
| AACGGGTGTGAGGAGGATGG+GGG | + | chr7_4:55686663-55686682 | Msa1164140:intron | 60.0% | |
| GTGAGTGGAAGGGGGGTAGT+CGG | + | chr7_4:55686745-55686764 | Msa1164140:intron | 60.0% | |
| !! | AAGGGGACTGGCTCCTTCAC+TGG | - | chr7_4:55686941-55686960 | None:intergenic | 60.0% |
| AAATGGGCACGTCCCTGCCA+TGG | + | chr7_4:55687130-55687149 | Msa1164140:intron | 60.0% | |
| TGGTACCCCAGTCCATGGCA+GGG | - | chr7_4:55687145-55687164 | None:intergenic | 60.0% | |
| ATGGTACCCCAGTCCATGGC+AGG | - | chr7_4:55687146-55687165 | None:intergenic | 60.0% | |
| TTGGGCCACCTTGACACCCT+TGG | - | chr7_4:55688423-55688442 | None:intergenic | 60.0% | |
| TCCCCCAGAAGGATGTGAGC+TGG | + | chr7_4:55689067-55689086 | Msa1164140:CDS | 60.0% | |
| CCCAGAAGGATGTGAGCTGG+AGG | + | chr7_4:55689070-55689089 | Msa1164140:CDS | 60.0% | |
| GCACGTCCCTGCCATGGACT+GGG | + | chr7_4:55687136-55687155 | Msa1164140:intron | 65.0% | |
| ! | CACGTCCCTGCCATGGACTG+GGG | + | chr7_4:55687137-55687156 | Msa1164140:intron | 65.0% |
| GGGGATGGTACCCCAGTCCA+TGG | - | chr7_4:55687150-55687169 | None:intergenic | 65.0% | |
| !! | GTGGGTGCTATTGGGCCCTG+AGG | + | chr7_4:55688151-55688170 | Msa1164140:intron | 65.0% |
| GGCACGTCCCTGCCATGGAC+TGG | + | chr7_4:55687135-55687154 | Msa1164140:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_4 | gene | 55683369 | 55689510 | 55683369 | ID=Msa1164140;Name=Msa1164140 |
| chr7_4 | mRNA | 55683369 | 55689510 | 55683369 | ID=Msa1164140-mRNA-1;Parent=Msa1164140;Name=Msa1164140-mRNA-1;_AED=0.09;_eAED=0.09;_QI=50|1|1|1|1|1|13|296|688 |
| chr7_4 | exon | 55683369 | 55683522 | 55683369 | ID=Msa1164140-mRNA-1:exon:16360;Parent=Msa1164140-mRNA-1 |
| chr7_4 | exon | 55683614 | 55683667 | 55683614 | ID=Msa1164140-mRNA-1:exon:16361;Parent=Msa1164140-mRNA-1 |
| chr7_4 | exon | 55683764 | 55683834 | 55683764 | ID=Msa1164140-mRNA-1:exon:16362;Parent=Msa1164140-mRNA-1 |
| chr7_4 | exon | 55684413 | 55684508 | 55684413 | ID=Msa1164140-mRNA-1:exon:16363;Parent=Msa1164140-mRNA-1 |
| chr7_4 | exon | 55684609 | 55684922 | 55684609 | ID=Msa1164140-mRNA-1:exon:16364;Parent=Msa1164140-mRNA-1 |
| chr7_4 | exon | 55685046 | 55685384 | 55685046 | ID=Msa1164140-mRNA-1:exon:16365;Parent=Msa1164140-mRNA-1 |
| chr7_4 | exon | 55685521 | 55685621 | 55685521 | ID=Msa1164140-mRNA-1:exon:16366;Parent=Msa1164140-mRNA-1 |
| chr7_4 | exon | 55685835 | 55686021 | 55685835 | ID=Msa1164140-mRNA-1:exon:16367;Parent=Msa1164140-mRNA-1 |
| chr7_4 | exon | 55686125 | 55686231 | 55686125 | ID=Msa1164140-mRNA-1:exon:16368;Parent=Msa1164140-mRNA-1 |
| chr7_4 | exon | 55686497 | 55686587 | 55686497 | ID=Msa1164140-mRNA-1:exon:16369;Parent=Msa1164140-mRNA-1 |
| chr7_4 | exon | 55687622 | 55687787 | 55687622 | ID=Msa1164140-mRNA-1:exon:16370;Parent=Msa1164140-mRNA-1 |
| chr7_4 | exon | 55688353 | 55688471 | 55688353 | ID=Msa1164140-mRNA-1:exon:16371;Parent=Msa1164140-mRNA-1 |
| chr7_4 | exon | 55688897 | 55689510 | 55688897 | ID=Msa1164140-mRNA-1:exon:16372;Parent=Msa1164140-mRNA-1 |
| chr7_4 | five_prime_UTR | 55683369 | 55683418 | 55683369 | ID=Msa1164140-mRNA-1:five_prime_utr;Parent=Msa1164140-mRNA-1 |
| chr7_4 | CDS | 55683419 | 55683522 | 55683419 | ID=Msa1164140-mRNA-1:cds;Parent=Msa1164140-mRNA-1 |
| chr7_4 | CDS | 55683614 | 55683667 | 55683614 | ID=Msa1164140-mRNA-1:cds;Parent=Msa1164140-mRNA-1 |
| chr7_4 | CDS | 55683764 | 55683834 | 55683764 | ID=Msa1164140-mRNA-1:cds;Parent=Msa1164140-mRNA-1 |
| chr7_4 | CDS | 55684413 | 55684508 | 55684413 | ID=Msa1164140-mRNA-1:cds;Parent=Msa1164140-mRNA-1 |
| chr7_4 | CDS | 55684609 | 55684922 | 55684609 | ID=Msa1164140-mRNA-1:cds;Parent=Msa1164140-mRNA-1 |
| chr7_4 | CDS | 55685046 | 55685384 | 55685046 | ID=Msa1164140-mRNA-1:cds;Parent=Msa1164140-mRNA-1 |
| chr7_4 | CDS | 55685521 | 55685621 | 55685521 | ID=Msa1164140-mRNA-1:cds;Parent=Msa1164140-mRNA-1 |
| chr7_4 | CDS | 55685835 | 55686021 | 55685835 | ID=Msa1164140-mRNA-1:cds;Parent=Msa1164140-mRNA-1 |
| chr7_4 | CDS | 55686125 | 55686231 | 55686125 | ID=Msa1164140-mRNA-1:cds;Parent=Msa1164140-mRNA-1 |
| chr7_4 | CDS | 55686497 | 55686587 | 55686497 | ID=Msa1164140-mRNA-1:cds;Parent=Msa1164140-mRNA-1 |
| chr7_4 | CDS | 55687622 | 55687787 | 55687622 | ID=Msa1164140-mRNA-1:cds;Parent=Msa1164140-mRNA-1 |
| chr7_4 | CDS | 55688353 | 55688471 | 55688353 | ID=Msa1164140-mRNA-1:cds;Parent=Msa1164140-mRNA-1 |
| chr7_4 | CDS | 55688897 | 55689214 | 55688897 | ID=Msa1164140-mRNA-1:cds;Parent=Msa1164140-mRNA-1 |
| chr7_4 | three_prime_UTR | 55689215 | 55689510 | 55689215 | ID=Msa1164140-mRNA-1:three_prime_utr;Parent=Msa1164140-mRNA-1 |
| Gene Sequence |
| Protein sequence |
