Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1368820 | XP_003625346.1 | 96.657 | 688 | 22 | 1 | 1 | 688 | 1 | 687 | 0.0 | 1368 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1368820 | sp|F4I443|BARD1_ARATH | 40.393 | 713 | 378 | 9 | 15 | 687 | 8 | 713 | 4.08e-166 | 496 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1368820 | G7KXD0 | 96.657 | 688 | 22 | 1 | 1 | 688 | 1 | 687 | 0.0 | 1368 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0421750 | Msa1368820 | 0.803885 | 2.814980e-49 | -8.615850e-47 |
| Msa1037220 | Msa1368820 | 0.985856 | 6.958515e-165 | -8.615850e-47 |
| Msa1077490 | Msa1368820 | 0.811415 | 7.080766e-51 | -8.615850e-47 |
| Msa1164140 | Msa1368820 | 0.867092 | 1.765200e-65 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1368820 | MtrunA17_Chr7g0261781 | 96.657 | 688 | 22 | 1 | 1 | 688 | 1 | 687 | 0.0 | 1368 |
| Msa1368820 | MtrunA17_Chr2g0285611 | 45.855 | 386 | 189 | 7 | 316 | 684 | 621 | 1003 | 1.19e-99 | 328 |
| Msa1368820 | MtrunA17_Chr2g0285611 | 41.667 | 84 | 49 | 0 | 20 | 103 | 1 | 84 | 1.03e-15 | 81.6 |
| Msa1368820 | MtrunA17_Chr2g0316851 | 42.697 | 89 | 49 | 2 | 351 | 438 | 425 | 512 | 1.54e-17 | 87.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1368820 | AT1G04020.1 | 41.036 | 714 | 371 | 13 | 15 | 687 | 8 | 712 | 1.47e-166 | 495 |
| Msa1368820 | AT1G04020.2 | 41.036 | 714 | 371 | 13 | 15 | 687 | 8 | 712 | 1.50e-166 | 495 |
| Msa1368820 | AT4G21070.1 | 43.377 | 385 | 190 | 7 | 316 | 683 | 564 | 937 | 1.38e-96 | 319 |
| Msa1368820 | AT4G21070.1 | 36.486 | 74 | 47 | 0 | 22 | 95 | 6 | 79 | 9.20e-14 | 75.5 |
| Msa1368820 | AT3G15120.2 | 46.914 | 81 | 41 | 2 | 353 | 432 | 560 | 639 | 2.38e-17 | 87.4 |
Find 148 sgRNAs with CRISPR-Local
Find 423 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAGAAAGAATGCCTCATTTC+TGG | 0.160062 | tig0018661:+32198 | Msa1368820:CDS |
| GCCCTAAGTCTGCCAGCTTT+TGG | 0.189747 | tig0018661:-35510 | None:intergenic |
| TCCTCCAGCTCACATCCTTC+TGG | 0.242149 | tig0018661:-36144 | None:intergenic |
| ATGCACCAAATGCGGTAAAA+AGG | 0.243480 | tig0018661:+32992 | Msa1368820:CDS |
| TGTAGATAATACGAGGGTTT+TGG | 0.274075 | tig0018661:+31678 | Msa1368820:intron |
| TTGTCCATCCATCCTTTGAT+AGG | 0.293477 | tig0018661:+36309 | Msa1368820:three_prime_UTR |
| AGTCAATTACTGCATGTAAA+TGG | 0.296568 | tig0018661:+36364 | Msa1368820:three_prime_UTR |
| AGGACGAAGTTTCAATTCTT+TGG | 0.304998 | tig0018661:+36163 | Msa1368820:CDS |
| TTTCAAGATATATCTTGTTT+TGG | 0.315417 | tig0018661:+36538 | Msa1368820:intron |
| ATTTATGGGTGGCAGATATT+AGG | 0.319180 | tig0018661:+31472 | Msa1368820:intron |
| CATTTCAGCCACTCAGTCTT+GGG | 0.329142 | tig0018661:+32120 | Msa1368820:intron |
| AAGCTGAATTGTAAAGAGTT+TGG | 0.335005 | tig0018661:-31708 | None:intergenic |
| TTAAGATTAGATTTCTCGTT+TGG | 0.335991 | tig0018661:-33252 | None:intergenic |
| TGTTGGTCACATGTGGATTC+TGG | 0.341840 | tig0018661:+36341 | Msa1368820:three_prime_UTR |
| CCTCCAGCTCACATCCTTCT+GGG | 0.350103 | tig0018661:-36143 | None:intergenic |
| GAACCTTTGGTATCACAAAA+TGG | 0.355934 | tig0018661:-31940 | None:intergenic |
| AACACCAAGTGCTCTCAAAA+AGG | 0.361103 | tig0018661:+30876 | Msa1368820:CDS |
| TTATGCACATGCACAACATT+TGG | 0.367201 | tig0018661:-32666 | None:intergenic |
| CATGCAATCATTTGTTCTGC+AGG | 0.370198 | tig0018661:+30666 | Msa1368820:CDS |
| AACGAACAAATGCTTGTACT+TGG | 0.370350 | tig0018661:-32419 | None:intergenic |
| TTGGGCCACCTTGACACCCT+TGG | 0.379821 | tig0018661:-35491 | None:intergenic |
| TTGATTCAAATTCATTGAAT+CGG | 0.381674 | tig0018661:-31890 | None:intergenic |
| ATCTCAACAGTCAAACCAAC+TGG | 0.383262 | tig0018661:+33584 | Msa1368820:CDS |
| TGGACATCTCTGCTTGCCGC+TGG | 0.384677 | tig0018661:+33075 | Msa1368820:CDS |
| TCATTTCAGCCACTCAGTCT+TGG | 0.387574 | tig0018661:+32119 | Msa1368820:intron |
| TATAATTCACAGTTCCTGTT+TGG | 0.387979 | tig0018661:+30815 | Msa1368820:intron |
| GAAATCTAATCTTAATAAAC+AGG | 0.395261 | tig0018661:+33260 | Msa1368820:CDS |
| GCATTTAAGCTTTGCTCCCC+GGG | 0.397136 | tig0018661:-32973 | None:intergenic |
| TGCATTTAAGCTTTGCTCCC+CGG | 0.401241 | tig0018661:-32974 | None:intergenic |
| TGCAAGTGGGATTTCAGTTA+CGG | 0.402316 | tig0018661:+32626 | Msa1368820:CDS |
| TTTAAGCCACTGAATAGCTT+TGG | 0.403126 | tig0018661:-35973 | None:intergenic |
| GATACCAAAGGTTCTGATAA+TGG | 0.404546 | tig0018661:+31949 | Msa1368820:CDS |
| GTGTTTATTTGCAGAAGATC+TGG | 0.408179 | tig0018661:+36439 | Msa1368820:three_prime_UTR |
| TTCAGCTTGTTGTAATAAGA+AGG | 0.410062 | tig0018661:+31723 | Msa1368820:CDS |
| TGATTCAAATTCATTGAATC+GGG | 0.415392 | tig0018661:-31889 | None:intergenic |
| CATGTATGTCGAATGAAGTT+GGG | 0.415957 | tig0018661:+31767 | Msa1368820:CDS |
| TTGATAGGTTGTTCAACTGT+TGG | 0.421430 | tig0018661:+36324 | Msa1368820:three_prime_UTR |
| CGAAGTACTATCCGCCAAAC+AGG | 0.421815 | tig0018661:-30829 | None:intergenic |
| CTTGAACTTGTTCAAGAAAC+CGG | 0.422955 | tig0018661:+30634 | Msa1368820:CDS |
| TTGAAAAGATCAAGCACAAC+AGG | 0.427870 | tig0018661:+32161 | Msa1368820:CDS |
| TATCTTGAAGATTTAGTTGA+AGG | 0.428100 | tig0018661:+36036 | Msa1368820:CDS |
| GCAACCATTATCAGAACCTT+TGG | 0.428911 | tig0018661:-31953 | None:intergenic |
| GTTGGTAAGAATCTCCAATC+TGG | 0.431033 | tig0018661:+31790 | Msa1368820:CDS |
| CACAAGCTTGTTATGATATG+AGG | 0.431338 | tig0018661:-32315 | None:intergenic |
| GCAAGTGGGATTTCAGTTAC+GGG | 0.433006 | tig0018661:+32627 | Msa1368820:CDS |
| CATTCATCTTAATCCCAGAT+TGG | 0.433543 | tig0018661:-31804 | None:intergenic |
| GCCCAAAAGCTGGCAGACTT+AGG | 0.435598 | tig0018661:+35508 | Msa1368820:CDS |
| TCACAAAATGGAGGGCTGTC+TGG | 0.440217 | tig0018661:-31928 | None:intergenic |
| TGCTCTATCAAATGAAGAAA+AGG | 0.440938 | tig0018661:+33650 | Msa1368820:CDS |
| TGATTGCATGGCAACAAAAC+CGG | 0.443356 | tig0018661:-30653 | None:intergenic |
| ATGCAAATGGAGCATGCTCC+AGG | 0.445574 | tig0018661:+34792 | Msa1368820:CDS |
| TACATACAGATGAGATGAAA+CGG | 0.452791 | tig0018661:-33298 | None:intergenic |
| GCAAGACATTTCAACCTCCT+TGG | 0.455564 | tig0018661:-31833 | None:intergenic |
| TGGAAGAGGTGCAAATTTGT+TGG | 0.458137 | tig0018661:+36101 | Msa1368820:CDS |
| AGTAACAATTTATAAAAGCT+TGG | 0.458646 | tig0018661:+31518 | Msa1368820:CDS |
| TTTAATTTCCAAGTCACAGC+AGG | 0.459412 | tig0018661:-32342 | None:intergenic |
| TGTCAAGGTGGCCCAAAAGC+TGG | 0.460255 | tig0018661:+35498 | Msa1368820:CDS |
| AAGTCACTTGGTGCATTTGA+AGG | 0.460513 | tig0018661:-32392 | None:intergenic |
| AGATCAAGCACAACAGGAAA+AGG | 0.464808 | tig0018661:+32167 | Msa1368820:CDS |
| CCACGTGTGACCAGCAGTAT+TGG | 0.465249 | tig0018661:-36217 | None:intergenic |
| TCATGTATGTCGAATGAAGT+TGG | 0.472199 | tig0018661:+31766 | Msa1368820:CDS |
| CCCAAAAGCTGGCAGACTTA+GGG | 0.477453 | tig0018661:+35509 | Msa1368820:CDS |
| AATTCACAGTTCCTGTTTGG+CGG | 0.480384 | tig0018661:+30818 | Msa1368820:intron |
| ACACTAAATTATTGAATCCA+TGG | 0.481895 | tig0018661:+30473 | Msa1368820:CDS |
| AGCAAGGATGACTTGGAAGT+TGG | 0.485500 | tig0018661:+36081 | Msa1368820:CDS |
| TGTGGATTCCTGCTGTGACT+TGG | 0.485655 | tig0018661:+32334 | Msa1368820:CDS |
| CCTCAAAACTTTCAATGTCC+TGG | 0.491069 | tig0018661:-34810 | None:intergenic |
| TTTGAAAAGCAAGGATGACT+TGG | 0.497107 | tig0018661:+36074 | Msa1368820:CDS |
| ATTTGAAAGCAGAAGTGGCC+CGG | 0.498029 | tig0018661:+32955 | Msa1368820:CDS |
| TCGAACTCAAATGCCCTCTC+TGG | 0.499084 | tig0018661:+30521 | Msa1368820:CDS |
| AGCTGGCAGACTTAGGGCAT+TGG | 0.502279 | tig0018661:+35515 | Msa1368820:CDS |
| ACGAACAAATGCTTGTACTT+GGG | 0.507695 | tig0018661:-32418 | None:intergenic |
| GACATCTGAGGTCCAACACT+TGG | 0.507792 | tig0018661:-34747 | None:intergenic |
| GTGCTTCAGTGTCCAAGTGT+TGG | 0.512826 | tig0018661:+34735 | Msa1368820:CDS |
| ACATACAGATGAGATGAAAC+GGG | 0.514985 | tig0018661:-33297 | None:intergenic |
| TTTGAAAGCAGAAGTGGCCC+GGG | 0.516786 | tig0018661:+32956 | Msa1368820:CDS |
| TGCATAAAGTTTGTATTGAC+TGG | 0.518801 | tig0018661:+32682 | Msa1368820:CDS |
| AATTTAACTGCCAATACTGC+TGG | 0.525045 | tig0018661:+36207 | Msa1368820:CDS |
| GGACATCTCTGCTTGCCGCT+GGG | 0.525265 | tig0018661:+33076 | Msa1368820:CDS |
| ATTACTGCATGTAAATGGAA+TGG | 0.528661 | tig0018661:+36369 | Msa1368820:three_prime_UTR |
| ATCTTGAAGATTTAGTTGAA+GGG | 0.529491 | tig0018661:+36037 | Msa1368820:CDS |
| TGGGATTTCAGTTACGGGAG+AGG | 0.530631 | tig0018661:+32632 | Msa1368820:CDS |
| TAAGAATTTGAAAGCAGAAG+TGG | 0.531904 | tig0018661:+32950 | Msa1368820:CDS |
| GAGTGCATTTAGCTAACAAA+AGG | 0.535263 | tig0018661:-36273 | None:intergenic |
| AAGAATCTTACAAATGAAGA+TGG | 0.536135 | tig0018661:+32275 | Msa1368820:CDS |
| CTCCAGCTCACATCCTTCTG+GGG | 0.537723 | tig0018661:-36142 | None:intergenic |
| ATCGCAGCAACTGATGCAAA+TGG | 0.538793 | tig0018661:+34779 | Msa1368820:CDS |
| TTATCATGTTCCTTGTGCAA+TGG | 0.539201 | tig0018661:+33055 | Msa1368820:CDS |
| TGAAATGTCTTGCAAGAGAG+GGG | 0.539341 | tig0018661:+31843 | Msa1368820:CDS |
| TGGACAATGGATCCTAAAAG+TGG | 0.544609 | tig0018661:+34844 | Msa1368820:CDS |
| GTACTTGGGTACAAGTCACT+TGG | 0.546415 | tig0018661:-32404 | None:intergenic |
| GTTCAACTGTTGGTCACATG+TGG | 0.551305 | tig0018661:+36334 | Msa1368820:three_prime_UTR |
| CTTGAAGATTTAGTTGAAGG+GGG | 0.555879 | tig0018661:+36039 | Msa1368820:CDS |
| TTCAGCCACTCAGTCTTGGG+AGG | 0.556513 | tig0018661:+32123 | Msa1368820:intron |
| TTGGTAAGAATCTCCAATCT+GGG | 0.560996 | tig0018661:+31791 | Msa1368820:CDS |
| CTCATATCATAACAAGCTTG+TGG | 0.561398 | tig0018661:+32316 | Msa1368820:CDS |
| CTTGACAACCAAGGGTGTCA+AGG | 0.567725 | tig0018661:+35483 | Msa1368820:CDS |
| CATATGCTATGTAGCACTGA+TGG | 0.573864 | tig0018661:+36578 | Msa1368820:three_prime_UTR |
| AAATTGATCTTGACAACCAA+GGG | 0.574072 | tig0018661:+35475 | Msa1368820:CDS |
| CTGCAGAACAAATGATTGCA+TGG | 0.574306 | tig0018661:-30665 | None:intergenic |
| TCCAGCTCACATCCTTCTGG+GGG | 0.577657 | tig0018661:-36141 | None:intergenic |
| AGTTACGGGAGAGGCTGCAA+TGG | 0.578569 | tig0018661:+32641 | Msa1368820:CDS |
| ACAACCTATCAAAGGATGGA+TGG | 0.580801 | tig0018661:-36313 | None:intergenic |
| TCTTGAAGATTTAGTTGAAG+GGG | 0.582313 | tig0018661:+36038 | Msa1368820:CDS |
| TTGAAATGTCTTGCAAGAGA+GGG | 0.584122 | tig0018661:+31842 | Msa1368820:CDS |
| CATCCTGAAAAGCTCCCAGT+TGG | 0.588642 | tig0018661:-33599 | None:intergenic |
| ATTAAATCTGACAAGGACAC+TGG | 0.589287 | tig0018661:+32359 | Msa1368820:CDS |
| CCAATACTGCTGGTCACACG+TGG | 0.589787 | tig0018661:+36217 | Msa1368820:CDS |
| GATGACTTGGAAGTTGGAAG+AGG | 0.592062 | tig0018661:+36087 | Msa1368820:CDS |
| GTTGAAATGTCTTGCAAGAG+AGG | 0.597499 | tig0018661:+31841 | Msa1368820:CDS |
| TCAGTCCTCTAAAATTTCCG+AGG | 0.607511 | tig0018661:+32445 | Msa1368820:CDS |
| TAAGATGAATGATAAAGCCA+AGG | 0.608020 | tig0018661:+31816 | Msa1368820:CDS |
| TTGAACAACCTATCAAAGGA+TGG | 0.611522 | tig0018661:-36317 | None:intergenic |
| GATGGACAAAACATCGGCTA+CGG | 0.612710 | tig0018661:-36295 | None:intergenic |
| ACAGTTGAACAACCTATCAA+AGG | 0.613463 | tig0018661:-36321 | None:intergenic |
| TTGTAATAAGAAGGTTGACA+AGG | 0.615588 | tig0018661:+31732 | Msa1368820:CDS |
| GAACTTTCAGACCAGAAATG+AGG | 0.616687 | tig0018661:-32209 | None:intergenic |
| GATTAATGTAGATAATACGA+GGG | 0.622145 | tig0018661:+31672 | Msa1368820:intron |
| TAGGAGCCAAAGCTATTCAG+TGG | 0.629124 | tig0018661:+35967 | Msa1368820:intron |
| TCTCAACAGTCAAACCAACT+GGG | 0.629351 | tig0018661:+33585 | Msa1368820:CDS |
| CAATGCTGCATTATGCAAGT+GGG | 0.630040 | tig0018661:+32613 | Msa1368820:CDS |
| ATGTCGAATGAAGTTGGGGT+TGG | 0.630058 | tig0018661:+31772 | Msa1368820:CDS |
| GTGGGAATACGTACCAGAGA+GGG | 0.630855 | tig0018661:-30534 | None:intergenic |
| CTTGGAAATTAAATCTGACA+AGG | 0.632331 | tig0018661:+32352 | Msa1368820:CDS |
| CCCAGAAGGATGTGAGCTGG+AGG | 0.636838 | tig0018661:+36143 | Msa1368820:CDS |
| CTTTGGTATCACAAAATGGA+GGG | 0.637647 | tig0018661:-31936 | None:intergenic |
| CCTTTGGTATCACAAAATGG+AGG | 0.640667 | tig0018661:-31937 | None:intergenic |
| TGATTAATGTAGATAATACG+AGG | 0.641373 | tig0018661:+31671 | Msa1368820:intron |
| AAGCTTAAATGCACCAAATG+CGG | 0.643172 | tig0018661:+32984 | Msa1368820:CDS |
| GGGCGATTCTAAATGGACAA+TGG | 0.643804 | tig0018661:+34831 | Msa1368820:CDS |
| GCAGAGATGTCCATTGCACA+AGG | 0.645765 | tig0018661:-33065 | None:intergenic |
| AATTTGACATTTGAATGACT+AGG | 0.646106 | tig0018661:-33228 | None:intergenic |
| GAAATTGATCTTGACAACCA+AGG | 0.650029 | tig0018661:+35474 | Msa1368820:CDS |
| AAGTTCTGCCTCTGAAAACG+AGG | 0.652089 | tig0018661:+32226 | Msa1368820:CDS |
| CAGTGATCAAAACAGCGAGA+AGG | 0.652921 | tig0018661:+31975 | Msa1368820:CDS |
| TCAGACCTCCCAAGACTGAG+TGG | 0.663906 | tig0018661:-32128 | None:intergenic |
| AATCGGGCTTCTCTGCAATG+TGG | 0.666514 | tig0018661:-31873 | None:intergenic |
| TCAATGCTGCATTATGCAAG+TGG | 0.666996 | tig0018661:+32612 | Msa1368820:CDS |
| ATGTATGTCGAATGAAGTTG+GGG | 0.667876 | tig0018661:+31768 | Msa1368820:CDS |
| GACAACCAAGGGTGTCAAGG+TGG | 0.671065 | tig0018661:+35486 | Msa1368820:CDS |
| GAAATGTCTTGCAAGAGAGG+GGG | 0.674263 | tig0018661:+31844 | Msa1368820:CDS |
| GATGAATGATAAAGCCAAGG+AGG | 0.677879 | tig0018661:+31819 | Msa1368820:CDS |
| TCACCAACAAAATACACTTG+TGG | 0.680479 | tig0018661:-32921 | None:intergenic |
| AGGATGGATGGACAAAACAT+CGG | 0.685875 | tig0018661:-36301 | None:intergenic |
| GATCACATGTGTGACATCTG+AGG | 0.687581 | tig0018661:-34759 | None:intergenic |
| AGTGGGAATACGTACCAGAG+AGG | 0.707061 | tig0018661:-30535 | None:intergenic |
| TTGAAAGCAGAAGTGGCCCG+GGG | 0.714591 | tig0018661:+32957 | Msa1368820:CDS |
| AAAGATGTACATGATCCCAG+CGG | 0.774516 | tig0018661:-33091 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTTATTTATTTATATTT+TGG | + | tig0018661:32008-32027 | Msa1368820:intron | 0.0% |
| !!! | TTTTAATAAAATTTAATTAT+GGG | - | tig0018661:35125-35144 | None:intergenic | 0.0% |
| !!! | TTTTTAATAAAATTTAATTA+TGG | - | tig0018661:35126-35145 | None:intergenic | 0.0% |
| !! | CTAAATAACAAAATTAAAAA+TGG | - | tig0018661:30565-30584 | None:intergenic | 10.0% |
| !!! | CATTTTTAATTTTGTTATTT+AGG | + | tig0018661:30563-30582 | Msa1368820:intron | 10.0% |
| !!! | TTATTTGATTTTTTTTTTGT+TGG | + | tig0018661:30602-30621 | Msa1368820:intron | 10.0% |
| !!! | TATTCTGTTTTATTTTATTT+TGG | + | tig0018661:30710-30729 | Msa1368820:intron | 10.0% |
| !!! | TTGATTTTTGATTTATTTTT+TGG | + | tig0018661:31098-31117 | Msa1368820:intron | 10.0% |
| !!! | TCATTATTAAACAAAATTTT+GGG | - | tig0018661:34258-34277 | None:intergenic | 10.0% |
| !!! | ATCATTATTAAACAAAATTT+TGG | - | tig0018661:34259-34278 | None:intergenic | 10.0% |
| !!! | AAAATTTTGTTTAATAATGA+TGG | + | tig0018661:34258-34277 | Msa1368820:intron | 10.0% |
| !! | TTTATTAAAAACTTGTATAT+TGG | + | tig0018661:35135-35154 | Msa1368820:intron | 10.0% |
| !! | TTATTAAAAACTTGTATATT+GGG | + | tig0018661:35136-35155 | Msa1368820:intron | 10.0% |
| !! | AAATTAAAAATGGAAAAAGT+GGG | - | tig0018661:30555-30574 | None:intergenic | 15.0% |
| !! | AAAATTAAAAATGGAAAAAG+TGG | - | tig0018661:30556-30575 | None:intergenic | 15.0% |
| !!! | TTCTGTTTTATTTCATTTTT+AGG | + | tig0018661:30752-30771 | Msa1368820:intron | 15.0% |
| !! | TTTATTCAAAAGAAGTTTAA+TGG | - | tig0018661:31287-31306 | None:intergenic | 15.0% |
| !! | ATAATATATTTGTAGAATAG+TGG | + | tig0018661:33863-33882 | Msa1368820:intron | 15.0% |
| !! | ATATTCATTGTTAAATTACT+TGG | + | tig0018661:35907-35926 | Msa1368820:intron | 15.0% |
| !!! | ATTTAGATTTGTGTTTTAAG+AGG | + | tig0018661:30950-30969 | Msa1368820:intron | 20.0% |
| !!! | ATTTTGTTGATTAATATGCT+TGG | + | tig0018661:31360-31379 | Msa1368820:intron | 20.0% |
| !! | AGTAACAATTTATAAAAGCT+TGG | + | tig0018661:31518-31537 | Msa1368820:CDS | 20.0% |
| !! | TTGATTCAAATTCATTGAAT+CGG | - | tig0018661:31893-31912 | None:intergenic | 20.0% |
| !!! | ATATTCTTGATGTATGTTTT+TGG | + | tig0018661:32747-32766 | Msa1368820:intron | 20.0% |
| !! | GAAATCTAATCTTAATAAAC+AGG | + | tig0018661:33260-33279 | Msa1368820:CDS | 20.0% |
| !! | AGTAATCTTCTATTTATGTT+TGG | + | tig0018661:33326-33345 | Msa1368820:intron | 20.0% |
| !! | TAATGTTCGAAGTAAATAAA+CGG | - | tig0018661:33413-33432 | None:intergenic | 20.0% |
| !! | ATAAAAACAAGACAAGAAAA+AGG | - | tig0018661:33530-33549 | None:intergenic | 20.0% |
| !!! | TTGTTTTTATACTGTTTCTA+AGG | + | tig0018661:33540-33559 | Msa1368820:intron | 20.0% |
| !! | TTTGTAATGTAATACTCTAA+CGG | - | tig0018661:34105-34124 | None:intergenic | 20.0% |
| !! | TTTAATAATGATGGTTAACT+AGG | + | tig0018661:34267-34286 | Msa1368820:intron | 20.0% |
| !! | TTAATAATGATGGTTAACTA+GGG | + | tig0018661:34268-34287 | Msa1368820:intron | 20.0% |
| !! | TTAATTCATCCATCAATTTA+AGG | - | tig0018661:34303-34322 | None:intergenic | 20.0% |
| !!! | TAAATTGATGGATGAATTAA+AGG | + | tig0018661:34303-34322 | Msa1368820:intron | 20.0% |
| !!! | AGTTAATTATCTTGTTTTTG+AGG | + | tig0018661:34344-34363 | Msa1368820:intron | 20.0% |
| !! | ACTCAATAATTCATTATCAT+AGG | + | tig0018661:34436-34455 | Msa1368820:intron | 20.0% |
| !! | AAGTTATTTGATATGATGAT+AGG | + | tig0018661:34472-34491 | Msa1368820:intron | 20.0% |
| !! | AAGTTATTTGATATGATGAT+AGG | + | tig0018661:34472-34491 | Msa1368820:intron | 20.0% |
| !! | TAATATATTTATCCTCTTGA+TGG | + | tig0018661:34676-34695 | Msa1368820:intron | 20.0% |
| !! | GACAAATATTGATGAATTAA+TGG | + | tig0018661:34934-34953 | Msa1368820:intron | 20.0% |
| !! | GAAGAAAACAAAACAATAAA+TGG | - | tig0018661:35083-35102 | None:intergenic | 20.0% |
| !! | TAATGAAAAAATACTTACGT+TGG | - | tig0018661:35541-35560 | None:intergenic | 20.0% |
| !!! | ATATGTTGTCCATTTTTAAT+TGG | + | tig0018661:36416-36435 | Msa1368820:three_prime_UTR | 20.0% |
| !!! | TATGTTGTCCATTTTTAATT+GGG | + | tig0018661:36417-36436 | Msa1368820:three_prime_UTR | 20.0% |
| !! | AATAAACACCCAATTAAAAA+TGG | - | tig0018661:36428-36447 | None:intergenic | 20.0% |
| !!! | GATATATCTTGTATTTTGTT+CGG | + | tig0018661:36513-36532 | Msa1368820:intron | 20.0% |
| !!! | TTTCAAGATATATCTTGTTT+TGG | + | tig0018661:36538-36557 | Msa1368820:intron | 20.0% |
| !!! | TTTTGGCATTTAAGATATTA+AGG | + | tig0018661:36555-36574 | Msa1368820:three_prime_UTR | 20.0% |
| !!! | TTCCATTTTTGTGAGTTTTT+GGG | - | tig0018661:30425-30444 | None:intergenic | 25.0% |
| !!! | TTTCCATTTTTGTGAGTTTT+TGG | - | tig0018661:30426-30445 | None:intergenic | 25.0% |
| ! | ACACTAAATTATTGAATCCA+TGG | + | tig0018661:30473-30492 | Msa1368820:CDS | 25.0% |
| !!! | ATTATTTTAGATGTTCAACG+AGG | + | tig0018661:31025-31044 | Msa1368820:intron | 25.0% |
| !!! | TTATTTTAGATGTTCAACGA+GGG | + | tig0018661:31026-31045 | Msa1368820:intron | 25.0% |
| ! | CAAACATTATAACTCATCAT+TGG | - | tig0018661:31081-31100 | None:intergenic | 25.0% |
| !!! | TTCCTACTTGTTTAATTTGT+GGG | + | tig0018661:31329-31348 | Msa1368820:intron | 25.0% |
| !!! | ATGTGTTGATTGCAAATTTA+TGG | + | tig0018661:31457-31476 | Msa1368820:intron | 25.0% |
| !!! | TGTGTTGATTGCAAATTTAT+GGG | + | tig0018661:31458-31477 | Msa1368820:intron | 25.0% |
| !! | GTTACTATATTTTCCACAAA+AGG | - | tig0018661:31504-31523 | None:intergenic | 25.0% |
| ! | TGATTAATGTAGATAATACG+AGG | + | tig0018661:31671-31690 | Msa1368820:intron | 25.0% |
| ! | GATTAATGTAGATAATACGA+GGG | + | tig0018661:31672-31691 | Msa1368820:intron | 25.0% |
| ! | TGATTCAAATTCATTGAATC+GGG | - | tig0018661:31892-31911 | None:intergenic | 25.0% |
| ! | AAGAATCTTACAAATGAAGA+TGG | + | tig0018661:32275-32294 | Msa1368820:CDS | 25.0% |
| ! | ATGCATATCATATATTACCT+CGG | - | tig0018661:32465-32484 | None:intergenic | 25.0% |
| ! | ATAATAAACAATGCATACAC+AGG | - | tig0018661:32724-32743 | None:intergenic | 25.0% |
| !!! | CTTTTAGTTCTGTTAGAATT+TGG | + | tig0018661:32861-32880 | Msa1368820:intron | 25.0% |
| ! | ACAGAAACACAAATTTGAAA+AGG | - | tig0018661:33148-33167 | None:intergenic | 25.0% |
| ! | AATTTGACATTTGAATGACT+AGG | - | tig0018661:33231-33250 | None:intergenic | 25.0% |
| ! | TTAAGATTAGATTTCTCGTT+TGG | - | tig0018661:33255-33274 | None:intergenic | 25.0% |
| ! | GGTAGATTGTATTTGTATAA+TGG | + | tig0018661:33347-33366 | Msa1368820:intron | 25.0% |
| ! | CATAATAGTATATGTACAGA+CGG | + | tig0018661:33467-33486 | Msa1368820:intron | 25.0% |
| !! | ATAGAGGTATGAAAAAATTC+AGG | + | tig0018661:33889-33908 | Msa1368820:intron | 25.0% |
| !! | TAGAGGTATGAAAAAATTCA+GGG | + | tig0018661:33890-33909 | Msa1368820:intron | 25.0% |
| ! | GAAAAAATTCAGGGAATTAT+TGG | + | tig0018661:33899-33918 | Msa1368820:intron | 25.0% |
| !! | GCAATTATACTTTCTGTTTT+TGG | + | tig0018661:33972-33991 | Msa1368820:intron | 25.0% |
| !! | TTTTACTGATAAGGTAAAAG+GGG | - | tig0018661:34042-34061 | None:intergenic | 25.0% |
| !! | GTTTTACTGATAAGGTAAAA+GGG | - | tig0018661:34043-34062 | None:intergenic | 25.0% |
| !! | AGTTTTACTGATAAGGTAAA+AGG | - | tig0018661:34044-34063 | None:intergenic | 25.0% |
| !!! | TTAAACAAAATTTTGGGTGA+GGG | - | tig0018661:34252-34271 | None:intergenic | 25.0% |
| !!! | ATTAAACAAAATTTTGGGTG+AGG | - | tig0018661:34253-34272 | None:intergenic | 25.0% |
| ! | ACTCAATAATTCATCATCAT+AGG | + | tig0018661:34507-34526 | Msa1368820:intron | 25.0% |
| ! | ATGATAAATAAAGCATACGA+AGG | - | tig0018661:34643-34662 | None:intergenic | 25.0% |
| !! | ATTGATTAATTTTGCAAGCA+AGG | + | tig0018661:34709-34728 | Msa1368820:CDS | 25.0% |
| ! | TCAGTAACCAAAATAAAAGA+CGG | - | tig0018661:34916-34935 | None:intergenic | 25.0% |
| !!! | TTCTTTCTTTGGTTTTTATC+TGG | + | tig0018661:34958-34977 | Msa1368820:intron | 25.0% |
| !!! | TTCATGTTCTTTTAAGAGTT+TGG | + | tig0018661:35002-35021 | Msa1368820:intron | 25.0% |
| !!! | TTCTTTTAAGAGTTTGGATT+TGG | + | tig0018661:35008-35027 | Msa1368820:intron | 25.0% |
| ! | TTCTTCTTGCAAACTATAAA+TGG | + | tig0018661:35097-35116 | Msa1368820:intron | 25.0% |
| ! | TCTTCTTGCAAACTATAAAT+GGG | + | tig0018661:35098-35117 | Msa1368820:intron | 25.0% |
| ! | CCAAAGGTTTCATAATATAT+TGG | - | tig0018661:35200-35219 | None:intergenic | 25.0% |
| ! | CCAATATATTATGAAACCTT+TGG | + | tig0018661:35197-35216 | Msa1368820:intron | 25.0% |
| ! | ATATATTATGAAACCTTTGG+AGG | + | tig0018661:35200-35219 | Msa1368820:intron | 25.0% |
| ! | ATAATGGTGATATTGTTAAC+AGG | - | tig0018661:35295-35314 | None:intergenic | 25.0% |
| !!! | AGGTTTTGAATTACAGTTTA+TGG | + | tig0018661:35632-35651 | Msa1368820:intron | 25.0% |
| !!! | GTTGATTTTGAGAAAAGATT+TGG | + | tig0018661:35666-35685 | Msa1368820:intron | 25.0% |
| ! | ATCAAGATATTTCAGTTGTA+AGG | - | tig0018661:35815-35834 | None:intergenic | 25.0% |
| ! | TTACAACTGAAATATCTTGA+TGG | + | tig0018661:35814-35833 | Msa1368820:intron | 25.0% |
| ! | TTTATTCTGATTGTGATTGT+AGG | + | tig0018661:35948-35967 | Msa1368820:intron | 25.0% |
| !!! | GGCTTAAAGTTTTATTTTTC+TGG | + | tig0018661:35988-36007 | Msa1368820:CDS | 25.0% |
| ! | TATCTTGAAGATTTAGTTGA+AGG | + | tig0018661:36036-36055 | Msa1368820:CDS | 25.0% |
| ! | ATCTTGAAGATTTAGTTGAA+GGG | + | tig0018661:36037-36056 | Msa1368820:CDS | 25.0% |
| !! | TCCATTTTTGTGAGTTTTTG+GGG | - | tig0018661:30424-30443 | None:intergenic | 30.0% |
| CTCACAAAAATGGAAAATTC+TGG | + | tig0018661:30430-30449 | Msa1368820:exon | 30.0% | |
| !! | TTTTGAAAATGAAGCATCCA+TGG | - | tig0018661:30493-30512 | None:intergenic | 30.0% |
| TATAATTCACAGTTCCTGTT+TGG | + | tig0018661:30815-30834 | Msa1368820:intron | 30.0% | |
| ! | CAGTGTAAACATTTTTACAC+TGG | + | tig0018661:31141-31160 | Msa1368820:intron | 30.0% |
| ! | GACAGATATTGGATTTTCAT+TGG | - | tig0018661:31170-31189 | None:intergenic | 30.0% |
| AAACTAACCATACAAAAGCA+GGG | - | tig0018661:31199-31218 | None:intergenic | 30.0% | |
| AAAACTAACCATACAAAAGC+AGG | - | tig0018661:31200-31219 | None:intergenic | 30.0% | |
| ! | TTTTAATCAGTAGTGTGACA+TGG | + | tig0018661:31217-31236 | Msa1368820:intron | 30.0% |
| !! | GTTCCTACTTGTTTAATTTG+TGG | + | tig0018661:31328-31347 | Msa1368820:intron | 30.0% |
| TACCCACAAATTAAACAAGT+AGG | - | tig0018661:31334-31353 | None:intergenic | 30.0% | |
| GTTGATTAATATGCTTGGTT+TGG | + | tig0018661:31365-31384 | Msa1368820:intron | 30.0% | |
| !!! | CACTTTTTCTATGATCTCAA+TGG | + | tig0018661:31400-31419 | Msa1368820:intron | 30.0% |
| TATTCCTCAACAAATGCAAA+AGG | - | tig0018661:31598-31617 | None:intergenic | 30.0% | |
| !!! | GCTGATTTGACATGTATTTT+TGG | + | tig0018661:31643-31662 | Msa1368820:intron | 30.0% |
| AAGCTGAATTGTAAAGAGTT+TGG | - | tig0018661:31711-31730 | None:intergenic | 30.0% | |
| !! | TTCAGCTTGTTGTAATAAGA+AGG | + | tig0018661:31723-31742 | Msa1368820:CDS | 30.0% |
| TTGTAATAAGAAGGTTGACA+AGG | + | tig0018661:31732-31751 | Msa1368820:CDS | 30.0% | |
| TAAGATGAATGATAAAGCCA+AGG | + | tig0018661:31816-31835 | Msa1368820:CDS | 30.0% | |
| GGATTTGTCCTACTAAATAT+GGG | - | tig0018661:32065-32084 | None:intergenic | 30.0% | |
| AGGATTTGTCCTACTAAATA+TGG | - | tig0018661:32066-32085 | None:intergenic | 30.0% | |
| CTTGGAAATTAAATCTGACA+AGG | + | tig0018661:32352-32371 | Msa1368820:CDS | 30.0% | |
| ! | TATTACCTCGGAAATTTTAG+AGG | - | tig0018661:32453-32472 | None:intergenic | 30.0% |
| AATAAGAGAATAAGCTCTCA+AGG | - | tig0018661:32529-32548 | None:intergenic | 30.0% | |
| TCTATTTGATACTATTTCCC+TGG | + | tig0018661:32558-32577 | Msa1368820:intron | 30.0% | |
| ! | TTTTCATGGGGATTTTTTGT+AGG | + | tig0018661:32581-32600 | Msa1368820:intron | 30.0% |
| ! | TGCATAAAGTTTGTATTGAC+TGG | + | tig0018661:32682-32701 | Msa1368820:CDS | 30.0% |
| !!! | TTCTTGATGTATGTTTTTGG+TGG | + | tig0018661:32750-32769 | Msa1368820:intron | 30.0% |
| TATTGAATCCTGATTGATCA+TGG | + | tig0018661:32791-32810 | Msa1368820:intron | 30.0% | |
| !! | ATGAAGTTGGTGTTATCTTT+GGG | + | tig0018661:32887-32906 | Msa1368820:intron | 30.0% |
| TAAGAATTTGAAAGCAGAAG+TGG | + | tig0018661:32950-32969 | Msa1368820:CDS | 30.0% | |
| AACTTAATTGATGCATTCTC+TGG | + | tig0018661:33179-33198 | Msa1368820:intron | 30.0% | |
| TACATACAGATGAGATGAAA+CGG | - | tig0018661:33301-33320 | None:intergenic | 30.0% | |
| CGTCTGTACATATACTATTA+TGG | - | tig0018661:33469-33488 | None:intergenic | 30.0% | |
| ! | TCAGGATGATGGTAAAAAAA+TGG | + | tig0018661:33614-33633 | Msa1368820:CDS | 30.0% |
| ! | GGTAAAAAAATGGTTTTCTG+TGG | + | tig0018661:33624-33643 | Msa1368820:CDS | 30.0% |
| TGCTCTATCAAATGAAGAAA+AGG | + | tig0018661:33650-33669 | Msa1368820:CDS | 30.0% | |
| ! | TGTAGAATAGTGGAATATAG+AGG | + | tig0018661:33873-33892 | Msa1368820:intron | 30.0% |
| TATTTGGCTGAACATGAAAA+TGG | + | tig0018661:34195-34214 | Msa1368820:intron | 30.0% | |
| ATTTGGCTGAACATGAAAAT+GGG | + | tig0018661:34196-34215 | Msa1368820:intron | 30.0% | |
| !! | TAAACAAAATTTTGGGTGAG+GGG | - | tig0018661:34251-34270 | None:intergenic | 30.0% |
| ! | ATTAATTTTGCAAGCAAGGT+TGG | + | tig0018661:34713-34732 | Msa1368820:CDS | 30.0% |
| !! | ATTACATACAGTCCACTTTT+AGG | - | tig0018661:34859-34878 | None:intergenic | 30.0% |
| !! | AAGTGGACTGTATGTAATTT+AGG | + | tig0018661:34861-34880 | Msa1368820:intron | 30.0% |
| CAGTAACCAAAATAAAAGAC+GGG | - | tig0018661:34915-34934 | None:intergenic | 30.0% | |
| GAATTAATGGCTTCTTTCTT+TGG | + | tig0018661:34947-34966 | Msa1368820:intron | 30.0% | |
| ! | TTGGTAGAAGACTTTTCATT+TGG | + | tig0018661:35027-35046 | Msa1368820:intron | 30.0% |
| ! | TGGTAGAAGACTTTTCATTT+GGG | + | tig0018661:35028-35047 | Msa1368820:intron | 30.0% |
| GAATCGGTGAATATGAAATT+GGG | + | tig0018661:35244-35263 | Msa1368820:intron | 30.0% | |
| AAATTGATCTTGACAACCAA+GGG | + | tig0018661:35475-35494 | Msa1368820:CDS | 30.0% | |
| CAATGCAAATGATATTTGCA+AGG | - | tig0018661:35584-35603 | None:intergenic | 30.0% | |
| GAGAAAAGATTTGGACATAT+AGG | + | tig0018661:35675-35694 | Msa1368820:intron | 30.0% | |
| ! | AGTTGCGGAATTTAAAATCA+TGG | + | tig0018661:35762-35781 | Msa1368820:intron | 30.0% |
| GATATTTCAGTTGTAAGGAA+AGG | - | tig0018661:35810-35829 | None:intergenic | 30.0% | |
| TAGTGAGCTAAAAAGAAAGA+TGG | - | tig0018661:35846-35865 | None:intergenic | 30.0% | |
| GAATATCAACAGACTTATGT+AGG | - | tig0018661:35893-35912 | None:intergenic | 30.0% | |
| TCTTGAAGATTTAGTTGAAG+GGG | + | tig0018661:36038-36057 | Msa1368820:CDS | 30.0% | |
| AGTCAATTACTGCATGTAAA+TGG | + | tig0018661:36364-36383 | Msa1368820:three_prime_UTR | 30.0% | |
| ATTACTGCATGTAAATGGAA+TGG | + | tig0018661:36369-36388 | Msa1368820:three_prime_UTR | 30.0% | |
| !! | TGTGAGTTTTTGGGGATTTT+TGG | - | tig0018661:30416-30435 | None:intergenic | 35.0% |
| TCCCCAAAAACTCACAAAAA+TGG | + | tig0018661:30420-30439 | Msa1368820:exon | 35.0% | |
| ! | CTTGAACTTGTTCAAGAAAC+CGG | + | tig0018661:30634-30653 | Msa1368820:CDS | 35.0% |
| !!! | AAAACCTTTTTGAGAGCACT+TGG | - | tig0018661:30883-30902 | None:intergenic | 35.0% |
| GATTGTGAATATGATCTCCA+TGG | + | tig0018661:31432-31451 | Msa1368820:intron | 35.0% | |
| TTGCAATCAACACATAACCA+TGG | - | tig0018661:31452-31471 | None:intergenic | 35.0% | |
| GTTGATTGCAAATTTATGGG+TGG | + | tig0018661:31461-31480 | Msa1368820:intron | 35.0% | |
| ATTTATGGGTGGCAGATATT+AGG | + | tig0018661:31472-31491 | Msa1368820:intron | 35.0% | |
| ! | TATTAGGCATTTGCCTTTTG+TGG | + | tig0018661:31488-31507 | Msa1368820:CDS | 35.0% |
| !! | GTTTCCTTTTGCATTTGTTG+AGG | + | tig0018661:31591-31610 | Msa1368820:intron | 35.0% |
| ! | TGTAGATAATACGAGGGTTT+TGG | + | tig0018661:31678-31697 | Msa1368820:intron | 35.0% |
| TCATGTATGTCGAATGAAGT+TGG | + | tig0018661:31766-31785 | Msa1368820:CDS | 35.0% | |
| CATGTATGTCGAATGAAGTT+GGG | + | tig0018661:31767-31786 | Msa1368820:CDS | 35.0% | |
| ATGTATGTCGAATGAAGTTG+GGG | + | tig0018661:31768-31787 | Msa1368820:CDS | 35.0% | |
| TTGGTAAGAATCTCCAATCT+GGG | + | tig0018661:31791-31810 | Msa1368820:CDS | 35.0% | |
| CATTCATCTTAATCCCAGAT+TGG | - | tig0018661:31807-31826 | None:intergenic | 35.0% | |
| TTGAAATGTCTTGCAAGAGA+GGG | + | tig0018661:31842-31861 | Msa1368820:CDS | 35.0% | |
| CTTTGGTATCACAAAATGGA+GGG | - | tig0018661:31939-31958 | None:intergenic | 35.0% | |
| GAACCTTTGGTATCACAAAA+TGG | - | tig0018661:31943-31962 | None:intergenic | 35.0% | |
| ! | GATACCAAAGGTTCTGATAA+TGG | + | tig0018661:31949-31968 | Msa1368820:CDS | 35.0% |
| AGCAACTTCCCATATTTAGT+AGG | + | tig0018661:32054-32073 | Msa1368820:intron | 35.0% | |
| ATAAGATGCCAAACTGAAAG+AGG | - | tig0018661:32086-32105 | None:intergenic | 35.0% | |
| TTGAAAAGATCAAGCACAAC+AGG | + | tig0018661:32161-32180 | Msa1368820:CDS | 35.0% | |
| AAGAAAGAATGCCTCATTTC+TGG | + | tig0018661:32198-32217 | Msa1368820:CDS | 35.0% | |
| !! | CACAAGCTTGTTATGATATG+AGG | - | tig0018661:32318-32337 | None:intergenic | 35.0% |
| CTCATATCATAACAAGCTTG+TGG | + | tig0018661:32316-32335 | Msa1368820:CDS | 35.0% | |
| ! | TTTAATTTCCAAGTCACAGC+AGG | - | tig0018661:32345-32364 | None:intergenic | 35.0% |
| ATTAAATCTGACAAGGACAC+TGG | + | tig0018661:32359-32378 | Msa1368820:CDS | 35.0% | |
| ACGAACAAATGCTTGTACTT+GGG | - | tig0018661:32421-32440 | None:intergenic | 35.0% | |
| AACGAACAAATGCTTGTACT+TGG | - | tig0018661:32422-32441 | None:intergenic | 35.0% | |
| AGAATAAGCTCTCAAGGAAA+GGG | - | tig0018661:32523-32542 | None:intergenic | 35.0% | |
| !! | TACTATTTCCCTGGTTTTCA+TGG | + | tig0018661:32567-32586 | Msa1368820:intron | 35.0% |
| !! | ACTATTTCCCTGGTTTTCAT+GGG | + | tig0018661:32568-32587 | Msa1368820:intron | 35.0% |
| AAAAATCCCCATGAAAACCA+GGG | - | tig0018661:32578-32597 | None:intergenic | 35.0% | |
| AAAAAATCCCCATGAAAACC+AGG | - | tig0018661:32579-32598 | None:intergenic | 35.0% | |
| TTATGCACATGCACAACATT+TGG | - | tig0018661:32669-32688 | None:intergenic | 35.0% | |
| TGAACAATCCATGATCAATC+AGG | - | tig0018661:32802-32821 | None:intergenic | 35.0% | |
| TAGAATTTGGCTGATGAAGT+TGG | + | tig0018661:32874-32893 | Msa1368820:intron | 35.0% | |
| !! | GATGAAGTTGGTGTTATCTT+TGG | + | tig0018661:32886-32905 | Msa1368820:intron | 35.0% |
| TCACCAACAAAATACACTTG+TGG | - | tig0018661:32924-32943 | None:intergenic | 35.0% | |
| AAGCTTAAATGCACCAAATG+CGG | + | tig0018661:32984-33003 | Msa1368820:CDS | 35.0% | |
| TTATCATGTTCCTTGTGCAA+TGG | + | tig0018661:33055-33074 | Msa1368820:CDS | 35.0% | |
| ACATACAGATGAGATGAAAC+GGG | - | tig0018661:33300-33319 | None:intergenic | 35.0% | |
| TGACTGCTTATTTCAATCGA+AGG | + | tig0018661:33435-33454 | Msa1368820:intron | 35.0% | |
| !! | ACTGTTTCTAAGGTTATCTC+TGG | + | tig0018661:33550-33569 | Msa1368820:intron | 35.0% |
| TGCACAACAAATTTCTGATG+TGG | + | tig0018661:33807-33826 | Msa1368820:intron | 35.0% | |
| TGGTGAGTAAGCTTCTTATA+AGG | + | tig0018661:33919-33938 | Msa1368820:intron | 35.0% | |
| GGTGAGTAAGCTTCTTATAA+GGG | + | tig0018661:33920-33939 | Msa1368820:intron | 35.0% | |
| GTGAGTAAGCTTCTTATAAG+GGG | + | tig0018661:33921-33940 | Msa1368820:intron | 35.0% | |
| ATAAGGGGCTTAATCATGAA+TGG | + | tig0018661:33936-33955 | Msa1368820:intron | 35.0% | |
| TAAGGGGCTTAATCATGAAT+GGG | + | tig0018661:33937-33956 | Msa1368820:intron | 35.0% | |
| !!! | AGGAGCTAGTTTTACTGATA+AGG | - | tig0018661:34051-34070 | None:intergenic | 35.0% |
| TCTAACGGAAATGTAACAAG+AGG | - | tig0018661:34090-34109 | None:intergenic | 35.0% | |
| ACCTAGCTGATACTTCTATT+TGG | + | tig0018661:34179-34198 | Msa1368820:intron | 35.0% | |
| !! | CAGGACATTGAAAGTTTTGA+GGG | + | tig0018661:34811-34830 | Msa1368820:CDS | 35.0% |
| !! | TTGATGCCCGTCTTTTATTT+TGG | + | tig0018661:34906-34925 | Msa1368820:intron | 35.0% |
| ! | GGTAGAAGACTTTTCATTTG+GGG | + | tig0018661:35029-35048 | Msa1368820:intron | 35.0% |
| ! | GTAGAAGACTTTTCATTTGG+GGG | + | tig0018661:35030-35049 | Msa1368820:intron | 35.0% |
| ! | TATTATGAAACCTTTGGAGG+TGG | + | tig0018661:35203-35222 | Msa1368820:intron | 35.0% |
| ! | ATTATGAAACCTTTGGAGGT+GGG | + | tig0018661:35204-35223 | Msa1368820:intron | 35.0% |
| GGAATCGGTGAATATGAAAT+TGG | + | tig0018661:35243-35262 | Msa1368820:intron | 35.0% | |
| CACGCATGAAAATCATGTTA+CGG | - | tig0018661:35326-35345 | None:intergenic | 35.0% | |
| TTCTACCTATCTTCTACTGT+AGG | + | tig0018661:35402-35421 | Msa1368820:intron | 35.0% | |
| TCTACCTATCTTCTACTGTA+GGG | + | tig0018661:35403-35422 | Msa1368820:intron | 35.0% | |
| TTATCCCTACAGTAGAAGAT+AGG | - | tig0018661:35410-35429 | None:intergenic | 35.0% | |
| GAAATTGATCTTGACAACCA+AGG | + | tig0018661:35474-35493 | Msa1368820:CDS | 35.0% | |
| AATATCAAGTGTCTTGCTCA+AGG | + | tig0018661:35612-35631 | Msa1368820:intron | 35.0% | |
| AATTGCAACATCTAGGTTTG+TGG | - | tig0018661:35740-35759 | None:intergenic | 35.0% | |
| CAACTGAAATTGCAACATCT+AGG | - | tig0018661:35747-35766 | None:intergenic | 35.0% | |
| AGATGTTGCAATTTCAGTTG+CGG | + | tig0018661:35747-35766 | Msa1368820:intron | 35.0% | |
| TTTAAGCCACTGAATAGCTT+TGG | - | tig0018661:35976-35995 | None:intergenic | 35.0% | |
| CTTGAAGATTTAGTTGAAGG+GGG | + | tig0018661:36039-36058 | Msa1368820:CDS | 35.0% | |
| !!! | AGGTGTTGTTTTGAAAAGCA+AGG | + | tig0018661:36065-36084 | Msa1368820:CDS | 35.0% |
| TTTGAAAAGCAAGGATGACT+TGG | + | tig0018661:36074-36093 | Msa1368820:CDS | 35.0% | |
| AGGACGAAGTTTCAATTCTT+TGG | + | tig0018661:36163-36182 | Msa1368820:CDS | 35.0% | |
| AATTTAACTGCCAATACTGC+TGG | + | tig0018661:36207-36226 | Msa1368820:CDS | 35.0% | |
| GAGTGCATTTAGCTAACAAA+AGG | - | tig0018661:36276-36295 | None:intergenic | 35.0% | |
| TTGAACAACCTATCAAAGGA+TGG | - | tig0018661:36320-36339 | None:intergenic | 35.0% | |
| ACAGTTGAACAACCTATCAA+AGG | - | tig0018661:36324-36343 | None:intergenic | 35.0% | |
| TTGATAGGTTGTTCAACTGT+TGG | + | tig0018661:36324-36343 | Msa1368820:three_prime_UTR | 35.0% | |
| GTGTTTATTTGCAGAAGATC+TGG | + | tig0018661:36439-36458 | Msa1368820:three_prime_UTR | 35.0% | |
| ! | AGATCTGGTCTATTTTGTAC+AGG | + | tig0018661:36454-36473 | Msa1368820:three_prime_UTR | 35.0% |
| !!! | TTGGGGATTTTTGGAGTTCT+CGG | - | tig0018661:30407-30426 | None:intergenic | 40.0% |
| TGATTGCATGGCAACAAAAC+CGG | - | tig0018661:30656-30675 | None:intergenic | 40.0% | |
| CTGCAGAACAAATGATTGCA+TGG | - | tig0018661:30668-30687 | None:intergenic | 40.0% | |
| CATGCAATCATTTGTTCTGC+AGG | + | tig0018661:30666-30685 | Msa1368820:CDS | 40.0% | |
| AATTCACAGTTCCTGTTTGG+CGG | + | tig0018661:30818-30837 | Msa1368820:intron | 40.0% | |
| AACACCAAGTGCTCTCAAAA+AGG | + | tig0018661:30876-30895 | Msa1368820:CDS | 40.0% | |
| CAGGGTGATATGACAGATAT+TGG | - | tig0018661:31181-31200 | None:intergenic | 40.0% | |
| !! | CATATCACCCTGCTTTTGTA+TGG | + | tig0018661:31189-31208 | Msa1368820:intron | 40.0% |
| AGTAGTGTGACATGGACAAA+TGG | + | tig0018661:31225-31244 | Msa1368820:intron | 40.0% | |
| ! | GTTGGTAAGAATCTCCAATC+TGG | + | tig0018661:31790-31809 | Msa1368820:CDS | 40.0% |
| GATGAATGATAAAGCCAAGG+AGG | + | tig0018661:31819-31838 | Msa1368820:CDS | 40.0% | |
| GTTGAAATGTCTTGCAAGAG+AGG | + | tig0018661:31841-31860 | Msa1368820:CDS | 40.0% | |
| TGAAATGTCTTGCAAGAGAG+GGG | + | tig0018661:31843-31862 | Msa1368820:CDS | 40.0% | |
| CCTTTGGTATCACAAAATGG+AGG | - | tig0018661:31940-31959 | None:intergenic | 40.0% | |
| ! | CCTCCATTTTGTGATACCAA+AGG | + | tig0018661:31937-31956 | Msa1368820:CDS | 40.0% |
| GCAACCATTATCAGAACCTT+TGG | - | tig0018661:31956-31975 | None:intergenic | 40.0% | |
| GGACAAATCCTCTTTCAGTT+TGG | + | tig0018661:32075-32094 | Msa1368820:intron | 40.0% | |
| AGATCAAGCACAACAGGAAA+AGG | + | tig0018661:32167-32186 | Msa1368820:CDS | 40.0% | |
| GAACTTTCAGACCAGAAATG+AGG | - | tig0018661:32212-32231 | None:intergenic | 40.0% | |
| !! | AAGTCACTTGGTGCATTTGA+AGG | - | tig0018661:32395-32414 | None:intergenic | 40.0% |
| !! | TCAGTCCTCTAAAATTTCCG+AGG | + | tig0018661:32445-32464 | Msa1368820:CDS | 40.0% |
| AATAAGCTCTCAAGGAAAGG+GGG | - | tig0018661:32521-32540 | None:intergenic | 40.0% | |
| GAATAAGCTCTCAAGGAAAG+GGG | - | tig0018661:32522-32541 | None:intergenic | 40.0% | |
| GAGAATAAGCTCTCAAGGAA+AGG | - | tig0018661:32524-32543 | None:intergenic | 40.0% | |
| !! | CTATTTCCCTGGTTTTCATG+GGG | + | tig0018661:32569-32588 | Msa1368820:intron | 40.0% |
| !!! | GGGATTTTTTGTAGGCTACT+GGG | + | tig0018661:32589-32608 | Msa1368820:intron | 40.0% |
| TCAATGCTGCATTATGCAAG+TGG | + | tig0018661:32612-32631 | Msa1368820:CDS | 40.0% | |
| CAATGCTGCATTATGCAAGT+GGG | + | tig0018661:32613-32632 | Msa1368820:CDS | 40.0% | |
| TGCAAGTGGGATTTCAGTTA+CGG | + | tig0018661:32626-32645 | Msa1368820:CDS | 40.0% | |
| CAATGCATACACAGGATATC+AGG | - | tig0018661:32716-32735 | None:intergenic | 40.0% | |
| TGGTGGAATCGATCTGAAAA+CGG | + | tig0018661:32767-32786 | Msa1368820:intron | 40.0% | |
| ! | GCACCACAAGTGTATTTTGT+TGG | + | tig0018661:32918-32937 | Msa1368820:CDS | 40.0% |
| ATGCACCAAATGCGGTAAAA+AGG | + | tig0018661:32992-33011 | Msa1368820:CDS | 40.0% | |
| TGCACCAAATGCGGTAAAAA+GGG | + | tig0018661:32993-33012 | Msa1368820:CDS | 40.0% | |
| AAAGATGTACATGATCCCAG+CGG | - | tig0018661:33094-33113 | None:intergenic | 40.0% | |
| ! | ATTGATGCATTCTCTGGTTC+AGG | + | tig0018661:33185-33204 | Msa1368820:intron | 40.0% |
| ATCTCAACAGTCAAACCAAC+TGG | + | tig0018661:33584-33603 | Msa1368820:CDS | 40.0% | |
| TCTCAACAGTCAAACCAACT+GGG | + | tig0018661:33585-33604 | Msa1368820:CDS | 40.0% | |
| CAGTTCCTCTGATAGACTAA+CGG | + | tig0018661:33729-33748 | Msa1368820:intron | 40.0% | |
| AGTTCCTCTGATAGACTAAC+GGG | + | tig0018661:33730-33749 | Msa1368820:intron | 40.0% | |
| CAAATTTCTGATGTGGTGAG+TGG | + | tig0018661:33814-33833 | Msa1368820:intron | 40.0% | |
| TAGTCATCTCTTCAACGTGT+TGG | - | tig0018661:34155-34174 | None:intergenic | 40.0% | |
| AACACGTTGAAGAGATGACT+AGG | + | tig0018661:34154-34173 | Msa1368820:intron | 40.0% | |
| ACACGTTGAAGAGATGACTA+GGG | + | tig0018661:34155-34174 | Msa1368820:intron | 40.0% | |
| !! | GCCAAATAGAAGTATCAGCT+AGG | - | tig0018661:34183-34202 | None:intergenic | 40.0% |
| AGTGAGAGGCCTTAAATTGA+TGG | + | tig0018661:34291-34310 | Msa1368820:intron | 40.0% | |
| !! | ATTTATCCTCTTGATGGTGC+AGG | + | tig0018661:34682-34701 | Msa1368820:intron | 40.0% |
| CCTCAAAACTTTCAATGTCC+TGG | - | tig0018661:34813-34832 | None:intergenic | 40.0% | |
| ! | CCAGGACATTGAAAGTTTTG+AGG | + | tig0018661:34810-34829 | Msa1368820:CDS | 40.0% |
| !!! | GTTTTGAGGGCGATTCTAAA+TGG | + | tig0018661:34824-34843 | Msa1368820:CDS | 40.0% |
| TGGACAATGGATCCTAAAAG+TGG | + | tig0018661:34844-34863 | Msa1368820:CDS | 40.0% | |
| !! | TCATATTCACCGATTCCTCA+GGG | - | tig0018661:35240-35259 | None:intergenic | 40.0% |
| !! | TTCATATTCACCGATTCCTC+AGG | - | tig0018661:35241-35260 | None:intergenic | 40.0% |
| CGGTGAATATGAAATTGGGA+TGG | + | tig0018661:35248-35267 | Msa1368820:intron | 40.0% | |
| ACAATATCACCATTATCGCG+TGG | + | tig0018661:35299-35318 | Msa1368820:intron | 40.0% | |
| CAATATCACCATTATCGCGT+GGG | + | tig0018661:35300-35319 | Msa1368820:intron | 40.0% | |
| TTGGACATATAGGAGTGACT+AGG | + | tig0018661:35685-35704 | Msa1368820:intron | 40.0% | |
| ACTAGGTTTCTGTTTCAACG+TGG | + | tig0018661:35702-35721 | Msa1368820:intron | 40.0% | |
| ! | TGGAAGAGGTGCAAATTTGT+TGG | + | tig0018661:36101-36120 | Msa1368820:CDS | 40.0% |
| AGGATGGATGGACAAAACAT+CGG | - | tig0018661:36304-36323 | None:intergenic | 40.0% | |
| TTGTCCATCCATCCTTTGAT+AGG | + | tig0018661:36309-36328 | Msa1368820:three_prime_UTR | 40.0% | |
| ACAACCTATCAAAGGATGGA+TGG | - | tig0018661:36316-36335 | None:intergenic | 40.0% | |
| ! | CATATGCTATGTAGCACTGA+TGG | + | tig0018661:36578-36597 | Msa1368820:three_prime_UTR | 40.0% |
| AGTGTGACATGGACAAATGG+CGG | + | tig0018661:31228-31247 | Msa1368820:intron | 45.0% | |
| GACAAATGGCGGTTTCTTGT+TGG | + | tig0018661:31239-31258 | Msa1368820:intron | 45.0% | |
| ! | GCTTTTCAGCAACGTTCTTC+TGG | + | tig0018661:31561-31580 | Msa1368820:CDS | 45.0% |
| ATGTCGAATGAAGTTGGGGT+TGG | + | tig0018661:31772-31791 | Msa1368820:CDS | 45.0% | |
| GCAAGACATTTCAACCTCCT+TGG | - | tig0018661:31836-31855 | None:intergenic | 45.0% | |
| GAAATGTCTTGCAAGAGAGG+GGG | + | tig0018661:31844-31863 | Msa1368820:CDS | 45.0% | |
| CAGTGATCAAAACAGCGAGA+AGG | + | tig0018661:31975-31994 | Msa1368820:CDS | 45.0% | |
| TCATTTCAGCCACTCAGTCT+TGG | + | tig0018661:32119-32138 | Msa1368820:intron | 45.0% | |
| CATTTCAGCCACTCAGTCTT+GGG | + | tig0018661:32120-32139 | Msa1368820:intron | 45.0% | |
| ! | AAGTTCTGCCTCTGAAAACG+AGG | + | tig0018661:32226-32245 | Msa1368820:CDS | 45.0% |
| ! | CGTAAGATCCTCGTTTTCAG+AGG | - | tig0018661:32237-32256 | None:intergenic | 45.0% |
| GTACTTGGGTACAAGTCACT+TGG | - | tig0018661:32407-32426 | None:intergenic | 45.0% | |
| !!! | GGGGATTTTTTGTAGGCTAC+TGG | + | tig0018661:32588-32607 | Msa1368820:intron | 45.0% |
| GCAAGTGGGATTTCAGTTAC+GGG | + | tig0018661:32627-32646 | Msa1368820:CDS | 45.0% | |
| ! | GTGTTATCTTTGGGAACCCA+GGG | + | tig0018661:32896-32915 | Msa1368820:intron | 45.0% |
| AAATACACTTGTGGTGCCCT+GGG | - | tig0018661:32915-32934 | None:intergenic | 45.0% | |
| AAAATACACTTGTGGTGCCC+TGG | - | tig0018661:32916-32935 | None:intergenic | 45.0% | |
| ATTTGAAAGCAGAAGTGGCC+CGG | + | tig0018661:32955-32974 | Msa1368820:CDS | 45.0% | |
| TGCATTTAAGCTTTGCTCCC+CGG | - | tig0018661:32977-32996 | None:intergenic | 45.0% | |
| ! | AGCTCCCTTTTTACCGCATT+TGG | - | tig0018661:33000-33019 | None:intergenic | 45.0% |
| !! | AAGGTTATCTCTGGTGCTGT+AGG | + | tig0018661:33559-33578 | Msa1368820:intron | 45.0% |
| ! | AAACCAACTGGGAGCTTTTC+AGG | + | tig0018661:33596-33615 | Msa1368820:CDS | 45.0% |
| !! | TGGGGGTATTGAGAATGTTC+AGG | + | tig0018661:33764-33783 | Msa1368820:intron | 45.0% |
| !! | GGGGGTATTGAGAATGTTCA+GGG | + | tig0018661:33765-33784 | Msa1368820:intron | 45.0% |
| TTTCTGATGTGGTGAGTGGA+AGG | + | tig0018661:33818-33837 | Msa1368820:intron | 45.0% | |
| TTCTGATGTGGTGAGTGGAA+GGG | + | tig0018661:33819-33838 | Msa1368820:intron | 45.0% | |
| CTGATAAGGTAAAAGGGGAC+TGG | - | tig0018661:34037-34056 | None:intergenic | 45.0% | |
| ! | TAGCTCCTCACTGTTTCTTG+TGG | + | tig0018661:34063-34082 | Msa1368820:intron | 45.0% |
| !! | CAAAATTTTGGGTGAGGGGA+TGG | - | tig0018661:34247-34266 | None:intergenic | 45.0% |
| ATGGTTAACTAGGGAGTGAG+AGG | + | tig0018661:34277-34296 | Msa1368820:intron | 45.0% | |
| GATCACATGTGTGACATCTG+AGG | - | tig0018661:34762-34781 | None:intergenic | 45.0% | |
| ATCGCAGCAACTGATGCAAA+TGG | + | tig0018661:34779-34798 | Msa1368820:CDS | 45.0% | |
| GGGCGATTCTAAATGGACAA+TGG | + | tig0018661:34831-34850 | Msa1368820:CDS | 45.0% | |
| TGCAACATCTAGGTTTGTGG+TGG | - | tig0018661:35737-35756 | None:intergenic | 45.0% | |
| TAGGAGCCAAAGCTATTCAG+TGG | + | tig0018661:35967-35986 | Msa1368820:intron | 45.0% | |
| GAAGATTTAGTTGAAGGGGG+AGG | + | tig0018661:36042-36061 | Msa1368820:CDS | 45.0% | |
| ! | AGCAAGGATGACTTGGAAGT+TGG | + | tig0018661:36081-36100 | Msa1368820:CDS | 45.0% |
| ! | GATGACTTGGAAGTTGGAAG+AGG | + | tig0018661:36087-36106 | Msa1368820:CDS | 45.0% |
| TACAATCTTGATCCCCCAGA+AGG | + | tig0018661:36129-36148 | Msa1368820:CDS | 45.0% | |
| ! | GATGGACAAAACATCGGCTA+CGG | - | tig0018661:36298-36317 | None:intergenic | 45.0% |
| GTTCAACTGTTGGTCACATG+TGG | + | tig0018661:36334-36353 | Msa1368820:three_prime_UTR | 45.0% | |
| TGTTGGTCACATGTGGATTC+TGG | + | tig0018661:36341-36360 | Msa1368820:three_prime_UTR | 45.0% | |
| !! | TAAATAAATAAATAAACTTT+AGG | - | tig0018661:30990-31009 | None:intergenic | 5.0% |
| !! | TTTAATAAAATTTAATTATG+GGG | - | tig0018661:35124-35143 | None:intergenic | 5.0% |
| TCGAACTCAAATGCCCTCTC+TGG | + | tig0018661:30521-30540 | Msa1368820:CDS | 50.0% | |
| GTGGGAATACGTACCAGAGA+GGG | - | tig0018661:30537-30556 | None:intergenic | 50.0% | |
| AGTGGGAATACGTACCAGAG+AGG | - | tig0018661:30538-30557 | None:intergenic | 50.0% | |
| ! | CGAAGTACTATCCGCCAAAC+AGG | - | tig0018661:30832-30851 | None:intergenic | 50.0% |
| AATCGGGCTTCTCTGCAATG+TGG | - | tig0018661:31876-31895 | None:intergenic | 50.0% | |
| TCACAAAATGGAGGGCTGTC+TGG | - | tig0018661:31931-31950 | None:intergenic | 50.0% | |
| TGTGGATTCCTGCTGTGACT+TGG | + | tig0018661:32334-32353 | Msa1368820:CDS | 50.0% | |
| CAAGGAAAGGGGGTGACAAT+AGG | - | tig0018661:32511-32530 | None:intergenic | 50.0% | |
| TGGGATTTCAGTTACGGGAG+AGG | + | tig0018661:32632-32651 | Msa1368820:CDS | 50.0% | |
| ! | GGTGTTATCTTTGGGAACCC+AGG | + | tig0018661:32895-32914 | Msa1368820:intron | 50.0% |
| TTTGAAAGCAGAAGTGGCCC+GGG | + | tig0018661:32956-32975 | Msa1368820:CDS | 50.0% | |
| GCATTTAAGCTTTGCTCCCC+GGG | - | tig0018661:32976-32995 | None:intergenic | 50.0% | |
| GGTAAAAAGGGAGCTGCTCT+TGG | + | tig0018661:33005-33024 | Msa1368820:CDS | 50.0% | |
| GCAGAGATGTCCATTGCACA+AGG | - | tig0018661:33068-33087 | None:intergenic | 50.0% | |
| ! | GATGCATTCTCTGGTTCAGG+TGG | + | tig0018661:33188-33207 | Msa1368820:intron | 50.0% |
| CATCCTGAAAAGCTCCCAGT+TGG | - | tig0018661:33602-33621 | None:intergenic | 50.0% | |
| !! | CTGGGAGCTTTTCAGGATGA+TGG | + | tig0018661:33603-33622 | Msa1368820:CDS | 50.0% |
| ! | CACACCCGTTAGTCTATCAG+AGG | - | tig0018661:33737-33756 | None:intergenic | 50.0% |
| ! | CTGATAGACTAACGGGTGTG+AGG | + | tig0018661:33737-33756 | Msa1368820:intron | 50.0% |
| ! | ATAGACTAACGGGTGTGAGG+AGG | + | tig0018661:33740-33759 | Msa1368820:intron | 50.0% |
| TCTGATGTGGTGAGTGGAAG+GGG | + | tig0018661:33820-33839 | Msa1368820:intron | 50.0% | |
| CCTTCACTGGAAAGGGATTC+AGG | - | tig0018661:34012-34031 | None:intergenic | 50.0% | |
| CCTGAATCCCTTTCCAGTGA+AGG | + | tig0018661:34009-34028 | Msa1368820:intron | 50.0% | |
| ! | ACTGGCTCCTTCACTGGAAA+GGG | - | tig0018661:34019-34038 | None:intergenic | 50.0% |
| GAGGTCCACAAGAAACAGTG+AGG | - | tig0018661:34071-34090 | None:intergenic | 50.0% | |
| ATAGCACCTGCACCATCAAG+AGG | - | tig0018661:34691-34710 | None:intergenic | 50.0% | |
| GTGCTTCAGTGTCCAAGTGT+TGG | + | tig0018661:34735-34754 | Msa1368820:CDS | 50.0% | |
| ! | GACATCTGAGGTCCAACACT+TGG | - | tig0018661:34750-34769 | None:intergenic | 50.0% |
| ATGCAAATGGAGCATGCTCC+AGG | + | tig0018661:34792-34811 | Msa1368820:CDS | 50.0% | |
| !! | CTTTGGAGGTGGGTGCTATT+GGG | + | tig0018661:35214-35233 | Msa1368820:intron | 50.0% |
| !! | CTTGACAACCAAGGGTGTCA+AGG | + | tig0018661:35483-35502 | Msa1368820:CDS | 50.0% |
| ! | CCCTAAGTCTGCCAGCTTTT+GGG | - | tig0018661:35512-35531 | None:intergenic | 50.0% |
| CCCAAAAGCTGGCAGACTTA+GGG | + | tig0018661:35509-35528 | Msa1368820:CDS | 50.0% | |
| GATTTAGTTGAAGGGGGAGG+AGG | + | tig0018661:36045-36064 | Msa1368820:CDS | 50.0% | |
| TTCAGCCACTCAGTCTTGGG+AGG | + | tig0018661:32123-32142 | Msa1368820:intron | 55.0% | |
| TCAGACCTCCCAAGACTGAG+TGG | - | tig0018661:32131-32150 | None:intergenic | 55.0% | |
| AGTTACGGGAGAGGCTGCAA+TGG | + | tig0018661:32641-32660 | Msa1368820:CDS | 55.0% | |
| TTGAAAGCAGAAGTGGCCCG+GGG | + | tig0018661:32957-32976 | Msa1368820:CDS | 55.0% | |
| ! | ACTAACGGGTGTGAGGAGGA+TGG | + | tig0018661:33744-33763 | Msa1368820:intron | 55.0% |
| ! | CTAACGGGTGTGAGGAGGAT+GGG | + | tig0018661:33745-33764 | Msa1368820:intron | 55.0% |
| ! | TAACGGGTGTGAGGAGGATG+GGG | + | tig0018661:33746-33765 | Msa1368820:intron | 55.0% |
| CTGATGTGGTGAGTGGAAGG+GGG | + | tig0018661:33821-33840 | Msa1368820:intron | 55.0% | |
| TGATGTGGTGAGTGGAAGGG+GGG | + | tig0018661:33822-33841 | Msa1368820:intron | 55.0% | |
| ! | GACTGGCTCCTTCACTGGAA+AGG | - | tig0018661:34020-34039 | None:intergenic | 55.0% |
| CCAATAGCACCCACCTCCAA+AGG | - | tig0018661:35216-35235 | None:intergenic | 55.0% | |
| ! | CCTTTGGAGGTGGGTGCTAT+TGG | + | tig0018661:35213-35232 | Msa1368820:intron | 55.0% |
| GCTATTGGGCCCTGAGGAAT+CGG | + | tig0018661:35228-35247 | Msa1368820:intron | 55.0% | |
| TGTTACGGCCCACGCGATAA+TGG | - | tig0018661:35311-35330 | None:intergenic | 55.0% | |
| !! | GACAACCAAGGGTGTCAAGG+TGG | + | tig0018661:35486-35505 | Msa1368820:CDS | 55.0% |
| TGTCAAGGTGGCCCAAAAGC+TGG | + | tig0018661:35498-35517 | Msa1368820:CDS | 55.0% | |
| GCCCAAAAGCTGGCAGACTT+AGG | + | tig0018661:35508-35527 | Msa1368820:CDS | 55.0% | |
| ! | GCCCTAAGTCTGCCAGCTTT+TGG | - | tig0018661:35513-35532 | None:intergenic | 55.0% |
| AGCTGGCAGACTTAGGGCAT+TGG | + | tig0018661:35515-35534 | Msa1368820:CDS | 55.0% | |
| TCCAGCTCACATCCTTCTGG+GGG | - | tig0018661:36144-36163 | None:intergenic | 55.0% | |
| CTCCAGCTCACATCCTTCTG+GGG | - | tig0018661:36145-36164 | None:intergenic | 55.0% | |
| CCTCCAGCTCACATCCTTCT+GGG | - | tig0018661:36146-36165 | None:intergenic | 55.0% | |
| TCCTCCAGCTCACATCCTTC+TGG | - | tig0018661:36147-36166 | None:intergenic | 55.0% | |
| CCACGTGTGACCAGCAGTAT+TGG | - | tig0018661:36220-36239 | None:intergenic | 55.0% | |
| CCAATACTGCTGGTCACACG+TGG | + | tig0018661:36217-36236 | Msa1368820:CDS | 55.0% | |
| TGGACATCTCTGCTTGCCGC+TGG | + | tig0018661:33075-33094 | Msa1368820:CDS | 60.0% | |
| GGACATCTCTGCTTGCCGCT+GGG | + | tig0018661:33076-33095 | Msa1368820:CDS | 60.0% | |
| AACGGGTGTGAGGAGGATGG+GGG | + | tig0018661:33747-33766 | Msa1368820:intron | 60.0% | |
| GTGAGTGGAAGGGGGGTAGT+CGG | + | tig0018661:33829-33848 | Msa1368820:intron | 60.0% | |
| !! | AAGGGGACTGGCTCCTTCAC+TGG | - | tig0018661:34025-34044 | None:intergenic | 60.0% |
| AAATGGGCACGTCCCTGCCA+TGG | + | tig0018661:34212-34231 | Msa1368820:intron | 60.0% | |
| TGGTACCCCAGTCCATGGCA+GGG | - | tig0018661:34227-34246 | None:intergenic | 60.0% | |
| ATGGTACCCCAGTCCATGGC+AGG | - | tig0018661:34228-34247 | None:intergenic | 60.0% | |
| TTGGGCCACCTTGACACCCT+TGG | - | tig0018661:35494-35513 | None:intergenic | 60.0% | |
| TCCCCCAGAAGGATGTGAGC+TGG | + | tig0018661:36140-36159 | Msa1368820:CDS | 60.0% | |
| CCCAGAAGGATGTGAGCTGG+AGG | + | tig0018661:36143-36162 | Msa1368820:CDS | 60.0% | |
| GCACGTCCCTGCCATGGACT+GGG | + | tig0018661:34218-34237 | Msa1368820:intron | 65.0% | |
| ! | CACGTCCCTGCCATGGACTG+GGG | + | tig0018661:34219-34238 | Msa1368820:intron | 65.0% |
| GGGGATGGTACCCCAGTCCA+TGG | - | tig0018661:34232-34251 | None:intergenic | 65.0% | |
| !! | GTGGGTGCTATTGGGCCCTG+AGG | + | tig0018661:35222-35241 | Msa1368820:intron | 65.0% |
| GGCACGTCCCTGCCATGGAC+TGG | + | tig0018661:34217-34236 | Msa1368820:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0018661 | gene | 30389 | 36613 | 30389 | ID=Msa1368820;Name=Msa1368820 |
| tig0018661 | mRNA | 30389 | 36613 | 30389 | ID=Msa1368820-mRNA-1;Parent=Msa1368820;Name=Msa1368820-mRNA-1;_AED=0.07;_eAED=0.07;_QI=50|1|1|1|0.92|0.85|14|295|688 |
| tig0018661 | exon | 30389 | 30542 | 30389 | ID=Msa1368820-mRNA-1:exon:670;Parent=Msa1368820-mRNA-1 |
| tig0018661 | exon | 30634 | 30687 | 30634 | ID=Msa1368820-mRNA-1:exon:671;Parent=Msa1368820-mRNA-1 |
| tig0018661 | exon | 30827 | 30897 | 30827 | ID=Msa1368820-mRNA-1:exon:672;Parent=Msa1368820-mRNA-1 |
| tig0018661 | exon | 31487 | 31582 | 31487 | ID=Msa1368820-mRNA-1:exon:673;Parent=Msa1368820-mRNA-1 |
| tig0018661 | exon | 31683 | 31996 | 31683 | ID=Msa1368820-mRNA-1:exon:674;Parent=Msa1368820-mRNA-1 |
| tig0018661 | exon | 32128 | 32466 | 32128 | ID=Msa1368820-mRNA-1:exon:675;Parent=Msa1368820-mRNA-1 |
| tig0018661 | exon | 32603 | 32703 | 32603 | ID=Msa1368820-mRNA-1:exon:676;Parent=Msa1368820-mRNA-1 |
| tig0018661 | exon | 32917 | 33103 | 32917 | ID=Msa1368820-mRNA-1:exon:677;Parent=Msa1368820-mRNA-1 |
| tig0018661 | exon | 33207 | 33313 | 33207 | ID=Msa1368820-mRNA-1:exon:678;Parent=Msa1368820-mRNA-1 |
| tig0018661 | exon | 33581 | 33671 | 33581 | ID=Msa1368820-mRNA-1:exon:679;Parent=Msa1368820-mRNA-1 |
| tig0018661 | exon | 34704 | 34869 | 34704 | ID=Msa1368820-mRNA-1:exon:680;Parent=Msa1368820-mRNA-1 |
| tig0018661 | exon | 35424 | 35542 | 35424 | ID=Msa1368820-mRNA-1:exon:681;Parent=Msa1368820-mRNA-1 |
| tig0018661 | exon | 35970 | 36513 | 35970 | ID=Msa1368820-mRNA-1:exon:682;Parent=Msa1368820-mRNA-1 |
| tig0018661 | exon | 36545 | 36613 | 36545 | ID=Msa1368820-mRNA-1:exon:683;Parent=Msa1368820-mRNA-1 |
| tig0018661 | five_prime_UTR | 30389 | 30438 | 30389 | ID=Msa1368820-mRNA-1:five_prime_utr;Parent=Msa1368820-mRNA-1 |
| tig0018661 | CDS | 30439 | 30542 | 30439 | ID=Msa1368820-mRNA-1:cds;Parent=Msa1368820-mRNA-1 |
| tig0018661 | CDS | 30634 | 30687 | 30634 | ID=Msa1368820-mRNA-1:cds;Parent=Msa1368820-mRNA-1 |
| tig0018661 | CDS | 30827 | 30897 | 30827 | ID=Msa1368820-mRNA-1:cds;Parent=Msa1368820-mRNA-1 |
| tig0018661 | CDS | 31487 | 31582 | 31487 | ID=Msa1368820-mRNA-1:cds;Parent=Msa1368820-mRNA-1 |
| tig0018661 | CDS | 31683 | 31996 | 31683 | ID=Msa1368820-mRNA-1:cds;Parent=Msa1368820-mRNA-1 |
| tig0018661 | CDS | 32128 | 32466 | 32128 | ID=Msa1368820-mRNA-1:cds;Parent=Msa1368820-mRNA-1 |
| tig0018661 | CDS | 32603 | 32703 | 32603 | ID=Msa1368820-mRNA-1:cds;Parent=Msa1368820-mRNA-1 |
| tig0018661 | CDS | 32917 | 33103 | 32917 | ID=Msa1368820-mRNA-1:cds;Parent=Msa1368820-mRNA-1 |
| tig0018661 | CDS | 33207 | 33313 | 33207 | ID=Msa1368820-mRNA-1:cds;Parent=Msa1368820-mRNA-1 |
| tig0018661 | CDS | 33581 | 33671 | 33581 | ID=Msa1368820-mRNA-1:cds;Parent=Msa1368820-mRNA-1 |
| tig0018661 | CDS | 34704 | 34869 | 34704 | ID=Msa1368820-mRNA-1:cds;Parent=Msa1368820-mRNA-1 |
| tig0018661 | CDS | 35424 | 35542 | 35424 | ID=Msa1368820-mRNA-1:cds;Parent=Msa1368820-mRNA-1 |
| tig0018661 | CDS | 35970 | 36287 | 35970 | ID=Msa1368820-mRNA-1:cds;Parent=Msa1368820-mRNA-1 |
| tig0018661 | three_prime_UTR | 36288 | 36513 | 36288 | ID=Msa1368820-mRNA-1:three_prime_utr;Parent=Msa1368820-mRNA-1 |
| tig0018661 | three_prime_UTR | 36545 | 36613 | 36545 | ID=Msa1368820-mRNA-1:three_prime_utr;Parent=Msa1368820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
