AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1171050

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1171050 MtrunA17_Chr3g0142301 96.327 1933 65 5 1 1930 1 1930 0.0 3805
Msa1171050 MtrunA17_Chr1g0155921 59.398 2027 634 34 1 1930 1 1935 0.0 2091
Msa1171050 MtrunA17_Chr6g0484711 37.563 591 314 12 874 1449 213 763 2.84e-99 340
Msa1171050 MtrunA17_Chr3g0100181 39.792 480 246 9 874 1346 152 595 5.47e-92 317
Msa1171050 MtrunA17_Chr1g0171381 40.351 456 227 9 897 1343 225 644 9.87e-92 320
Msa1171050 MtrunA17_Chr8g0360771 39.248 479 232 11 883 1346 164 598 7.14e-85 296
Msa1171050 MtrunA17_Chr3g0109701 34.755 469 251 13 883 1340 30 454 8.10e-65 229
Msa1171050 MtrunA17_Chr3g0095231 35.032 471 247 13 883 1340 30 454 1.76e-59 214
Msa1171050 MtrunA17_Chr5g0442341 34.137 498 277 15 873 1358 18 476 6.07e-59 212
Msa1171050 MtrunA17_Chr2g0299181 27.536 345 187 10 1058 1344 196 535 1.30e-24 110
Msa1171050 MtrunA17_Chr3g0089841 21.154 468 304 13 906 1356 33 452 3.15e-20 96.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1171050 AT4G16310.2 56.201 1411 503 23 548 1922 289 1620 0.0 1461
Msa1171050 AT4G16310.3 56.201 1411 503 23 548 1922 289 1620 0.0 1461
Msa1171050 AT4G16310.5 56.201 1411 503 23 548 1922 289 1620 0.0 1461
Msa1171050 AT4G16310.1 56.201 1411 503 23 548 1922 289 1620 0.0 1461
Msa1171050 AT4G16310.4 56.201 1411 503 23 548 1922 289 1620 0.0 1461
Msa1171050 AT3G10390.4 41.880 468 230 11 883 1343 187 619 2.67e-96 331
Msa1171050 AT3G10390.1 41.880 468 230 11 883 1343 187 619 3.18e-96 333
Msa1171050 AT3G10390.3 41.880 468 230 11 883 1343 239 671 5.72e-96 334
Msa1171050 AT3G10390.2 41.880 468 230 11 883 1343 239 671 7.51e-96 333
Msa1171050 AT1G62830.1 41.004 478 243 10 874 1344 259 704 2.30e-95 330
Msa1171050 AT3G13682.1 39.922 511 255 13 883 1384 162 629 8.36e-89 308
Msa1171050 AT1G65840.1 34.864 479 260 13 869 1337 17 453 1.53e-70 246
Msa1171050 AT3G59050.1 35.789 475 256 13 876 1340 20 455 5.25e-65 230
Msa1171050 AT2G43020.1 35.076 459 241 14 894 1340 41 454 1.59e-63 226
Msa1171050 AT4G29720.1 27.355 552 285 19 880 1344 4 526 1.07e-35 145
Msa1171050 AT5G13700.1 27.948 229 149 8 1113 1337 207 423 5.14e-18 90.1

Find 499 sgRNAs with CRISPR-Local

Find 763 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCACACCTTCATCTAATTT+TGG 0.101625 8_1:-542422 None:intergenic
GGATTGGCACTTTGCTAATT+TGG 0.126077 8_1:+545065 Msa1171050:CDS
AAGTTCTCCCCTTGTGATTC+TGG 0.148892 8_1:+542287 Msa1171050:CDS
TCGTATTGCAACATTGAAAT+AGG 0.151303 8_1:+541084 Msa1171050:five_prime_UTR
TCTAATACTGAACTGCATTT+TGG 0.171656 8_1:-542689 None:intergenic
GCATAGCCTGGTCACCCTTC+TGG 0.187441 8_1:-544912 None:intergenic
GGAGAAGACTATGATATATT+AGG 0.188554 8_1:+545792 Msa1171050:CDS
TGGAATTTCCTAGTGTGTTT+TGG 0.202844 8_1:+545466 Msa1171050:CDS
TCACGTCAACCATGCATTAT+TGG 0.210137 8_1:+545650 Msa1171050:CDS
CACCGTCTCTCTCCCGAAAT+TGG 0.216225 8_1:+542154 Msa1171050:CDS
AATAATGAAGATATGGTTTC+TGG 0.219377 8_1:+541153 Msa1171050:CDS
TTTACTTATGCCTCTTTATA+AGG 0.223551 8_1:+548947 Msa1171050:CDS
TTGAGCTCGCCCTCAATAAT+TGG 0.224163 8_1:-542185 None:intergenic
CTTTCTTCTAATGCATCCTT+TGG 0.229029 8_1:-542068 None:intergenic
GGAGTCTTCTGATGGGTCTT+TGG 0.230646 8_1:+541470 Msa1171050:CDS
GCTTCAATGGCGATTCTAAT+TGG 0.233069 8_1:-541002 None:intergenic
CACTTTGCTAATTTGGAGTA+TGG 0.235357 8_1:+545072 Msa1171050:CDS
CAACATTGAAATAGGGATTC+AGG 0.240863 8_1:+541092 Msa1171050:five_prime_UTR
TGCTCGCCACTTGCAACGTC+TGG 0.245531 8_1:+544579 Msa1171050:CDS
TCCTTTGGATGCCAGGCTTC+TGG 0.249812 8_1:+549758 Msa1171050:three_prime_UTR
AATACTCCAAAAGATGAAAA+AGG 0.250436 8_1:+541717 Msa1171050:CDS
CTCCTCGCTCTTCTCTTATT+AGG 0.258000 8_1:+543873 Msa1171050:CDS
ATTCTAGAAATTGCAGAGTT+AGG 0.262024 8_1:+548478 Msa1171050:CDS
CTAAATCATCTGAAAATATA+CGG 0.262667 8_1:+542318 Msa1171050:CDS
TTGCTTGCTGTGCGCTTATC+AGG 0.265313 8_1:+546473 Msa1171050:CDS
TGTATCAGGGTGCTCTTTGC+AGG 0.267151 8_1:-545856 None:intergenic
ATCCTTTGCTGGGAGTAAAA+AGG 0.271169 8_1:+546202 Msa1171050:CDS
TTCACAGGTTACTGTGAATA+AGG 0.271784 8_1:+548857 Msa1171050:CDS
TAAGCCGGGAAGCTTTATTA+AGG 0.276372 8_1:+546096 Msa1171050:CDS
GCTTACTCCTATGTTGCTAT+TGG 0.280636 8_1:+545762 Msa1171050:CDS
AGGATTAAACTGGTAGAAAA+TGG 0.282826 8_1:+541189 Msa1171050:CDS
TCTATTCAGCGTCTTGGATT+TGG 0.284453 8_1:+545423 Msa1171050:CDS
TATACACTTATAGGAGAAAA+AGG 0.289727 8_1:+544151 Msa1171050:CDS
ATTGCACCACCAACTGTATC+AGG 0.290135 8_1:-545870 None:intergenic
TCAAATGGCAATGAGTTCTT+TGG 0.297133 8_1:+545312 Msa1171050:CDS
TGTAGTAGCACAAGAGGATT+TGG 0.300719 8_1:+541338 Msa1171050:CDS
CTAGGGTTATACAGAAAATA+TGG 0.309194 8_1:+541128 Msa1171050:exon
TTGTGGAATGAGGGTATCTT+TGG 0.309299 8_1:-548354 None:intergenic
GAGTCTTCTGATGGGTCTTT+GGG 0.309447 8_1:+541471 Msa1171050:CDS
GGGCAGGGTGCTGGAGAAAA+TGG 0.309549 8_1:+541558 Msa1171050:CDS
GAGATTATCAGCTGACATTC+TGG 0.309566 8_1:-548547 None:intergenic
CTTTCTGTCCCTGTGGATCT+TGG 0.310031 8_1:+544670 Msa1171050:CDS
ACCGTCTCTCTCCCGAAATT+GGG 0.312677 8_1:+542155 Msa1171050:CDS
ATACAGAAAGAGATGAAGTT+AGG 0.317676 8_1:+545997 Msa1171050:CDS
CGCGTTGGTTTGTGCTCAGT+TGG 0.321960 8_1:+544753 Msa1171050:CDS
CTCTTCATCTTTCAAATGTA+TGG 0.323371 8_1:-548769 None:intergenic
GATGATGTGTATGGAGGATA+TGG 0.325592 8_1:+545141 Msa1171050:CDS
CGTATTGCAACATTGAAATA+GGG 0.326051 8_1:+541085 Msa1171050:five_prime_UTR
GTTCCAAACGGCGCCTCTTA+AGG 0.328909 8_1:-544966 None:intergenic
AGATTTCAAGCGGAAGAATA+AGG 0.331771 8_1:+549246 Msa1171050:CDS
TTTCATCCAAACCTTCATAT+TGG 0.333452 8_1:-541503 None:intergenic
TCCTCGCTCTTCTCTTATTA+GGG 0.335248 8_1:+543874 Msa1171050:CDS
TCCTCAAGAAAGAAGGATTA+TGG 0.337226 8_1:+545044 Msa1171050:CDS
TTTAGTCTGACCAACAATAA+AGG 0.337232 8_1:-544224 None:intergenic
GGTCTCCGCACTCACGGTTT+TGG 0.338212 8_1:+549509 Msa1171050:three_prime_UTR
GCTTAAATTCTGACCATCTA+TGG 0.343154 8_1:-545619 None:intergenic
TTGGAATCTGTTTATTCTTA+CGG 0.343783 8_1:+549488 Msa1171050:three_prime_UTR
GGAGCACATTGTATGATTAA+AGG 0.348874 8_1:+545165 Msa1171050:CDS
AGTTCTCCCCTTGTGATTCT+GGG 0.350794 8_1:+542288 Msa1171050:CDS
GTTCTTTGGAGATGCTGTTC+TGG 0.352269 8_1:+545326 Msa1171050:CDS
AGGCATAATTATACACTTAT+AGG 0.356795 8_1:+544142 Msa1171050:CDS
TTGCATATGTTGTGACTGAT+TGG 0.356809 8_1:+545715 Msa1171050:CDS
GAGTAAGCACCATAGCTAAA+AGG 0.357298 8_1:-545747 None:intergenic
TCTGAAAGTAAGTTTGTCTA+TGG 0.358454 8_1:+542446 Msa1171050:CDS
GGTTTCTGAAAATGTATTCC+AGG 0.359929 8_1:+542358 Msa1171050:CDS
GGCATCTTCAGTTTCTCTAT+TGG 0.361391 8_1:-542777 None:intergenic
AAATGGATCTGATTTGGATA+TGG 0.362727 8_1:+541575 Msa1171050:CDS
TCAACCCATCATTCACATTC+TGG 0.363870 8_1:-541884 None:intergenic
CTTCTTTAGCTTCAGTTGTC+AGG 0.367789 8_1:-544300 None:intergenic
TTGCCACTCCATCATGGTTC+CGG 0.368188 8_1:-548821 None:intergenic
TTTCAACTGGACCAGCTTCA+TGG 0.368564 8_1:-543114 None:intergenic
TGTTCCATTGGGCTGCTTGA+AGG 0.368673 8_1:+545353 Msa1171050:CDS
TCCAGGAGTATTTAGATTGC+AGG 0.372112 8_1:+543176 Msa1171050:CDS
CATAGCCTGGTCACCCTTCT+GGG 0.374301 8_1:-544911 None:intergenic
ACCATGCATTATTGGTTCTT+CGG 0.374864 8_1:+545658 Msa1171050:CDS
GAGGCCACTGCTTTATGTTC+TGG 0.375051 8_1:+545538 Msa1171050:CDS
TATGGATAATAATGAAGATA+TGG 0.375224 8_1:+541146 Msa1171050:exon
CGCAAGGAAAAGACATCTAA+TGG 0.375464 8_1:+547117 Msa1171050:CDS
CACTCCATCATGGTTCCGGC+TGG 0.375677 8_1:-548817 None:intergenic
GAACACTGGAAATGATTATA+CGG 0.376132 8_1:+545935 Msa1171050:CDS
TTGAGATTGCCATCTCTCTA+TGG 0.376152 8_1:-548712 None:intergenic
GCAAACTTGAAATCCTTTGC+TGG 0.378339 8_1:+546191 Msa1171050:CDS
CATATGAAGGGGATGTTGAT+TGG 0.379070 8_1:+542939 Msa1171050:CDS
TGAAACAGTTAAATCTGAAT+TGG 0.379710 8_1:+542592 Msa1171050:CDS
AGAGGGGCCTAATGTGGATT+TGG 0.380913 8_1:+541632 Msa1171050:CDS
TAAACTGGTAGAAAATGGTT+TGG 0.381436 8_1:+541194 Msa1171050:CDS
GAAGAAAGAATTCTCAATGA+TGG 0.381648 8_1:+542083 Msa1171050:CDS
TTCTAGAAATTGCAGAGTTA+GGG 0.383956 8_1:+548479 Msa1171050:CDS
AGGAGGTTTCTCTTCCCTAC+TGG 0.384063 8_1:+545112 Msa1171050:CDS
GTTCCCGCCTCTTAAATTTG+TGG 0.386157 8_1:-548371 None:intergenic
TAACACTAAGATTTCACATC+TGG 0.386238 8_1:-549442 None:intergenic
AGACTTCTTGTACAATAAGT+TGG 0.386324 8_1:-546054 None:intergenic
CAATTATTGGTGTAGGCATT+GGG 0.386457 8_1:+547004 Msa1171050:intron
GGCTTCCTTAGTTTAAATAT+AGG 0.386912 8_1:-541234 None:intergenic
CCCTCTATCTGTACAGCTTA+GGG 0.387688 8_1:+549931 Msa1171050:three_prime_UTR
GAACAATACTGTGTTCTAAC+AGG 0.389784 8_1:-549996 None:intergenic
TTGTTGAGTCATTAGGTAAA+GGG 0.391484 8_1:+545202 Msa1171050:CDS
TTGTTACAACATGGTTCAAA+TGG 0.393836 8_1:-545233 None:intergenic
AGCACTGTTGTTGAGTCATT+AGG 0.395837 8_1:+545195 Msa1171050:CDS
AGAAAGAGAGTGATTGTCAT+TGG 0.396537 8_1:+544532 Msa1171050:CDS
TGTTCTGGTTACTGTTCCAT+TGG 0.399683 8_1:+545341 Msa1171050:CDS
TGCCCTTAAGAGGCGCCGTT+TGG 0.400153 8_1:+544963 Msa1171050:CDS
TGCATATGTTGTGACTGATT+GGG 0.401094 8_1:+545716 Msa1171050:CDS
TCTAGATCCCAAGGTTCAAC+AGG 0.402759 8_1:+547372 Msa1171050:CDS
GAAATCAGATCCTAGCTCTC+TGG 0.405264 8_1:+543780 Msa1171050:intron
AGGAGCAGATTGTATCAAAA+AGG 0.405935 8_1:+548902 Msa1171050:CDS
GTTATTTGCAGCTCTGTTGA+AGG 0.406160 8_1:+549461 Msa1171050:three_prime_UTR
TTTCTTCTAATGCATCCTTT+GGG 0.407441 8_1:-542067 None:intergenic
TTTCAAATGTATGGCTGGAT+TGG 0.407795 8_1:-548760 None:intergenic
GTTGGGAAAGCGGCCATAGA+TGG 0.408409 8_1:+545606 Msa1171050:CDS
AATTGTGAAGTGGAAAACTA+TGG 0.409532 8_1:+541045 Msa1171050:five_prime_UTR
CTGACTTCCTTGTTTGCTGT+GGG 0.409873 8_1:-547313 None:intergenic
TATTCTTCTATTCAGCGTCT+TGG 0.410237 8_1:+545417 Msa1171050:CDS
GAGAAGACTATGATATATTA+GGG 0.410282 8_1:+545793 Msa1171050:CDS
GAAAAGGCTTCTCTTGCAAA+TGG 0.411004 8_1:+542740 Msa1171050:CDS
GTCATTGGAGCCGGTCCTGC+TGG 0.414652 8_1:+544547 Msa1171050:CDS
TTCCAAACGGCGCCTCTTAA+GGG 0.414880 8_1:-544965 None:intergenic
AGTTGAATCCTTTGGATGCC+AGG 0.415092 8_1:+549751 Msa1171050:three_prime_UTR
AAGCCGGGAAGCTTTATTAA+GGG 0.416020 8_1:+546097 Msa1171050:CDS
AGCAAGCGGCAAATGACTTA+TGG 0.417289 8_1:+547334 Msa1171050:CDS
TCCCTCTATCTGTACAGCTT+AGG 0.418168 8_1:+549930 Msa1171050:three_prime_UTR
TTTCAGGGTTATATAAATGT+TGG 0.418996 8_1:+544082 Msa1171050:intron
GGAATATTGTGTGTTTCTAA+AGG 0.419200 8_1:-542644 None:intergenic
GTAGTAGCACAAGAGGATTT+GGG 0.420763 8_1:+541339 Msa1171050:CDS
ACACTTTGGCTTTCAAGAAA+AGG 0.421738 8_1:-542983 None:intergenic
TGATGATAAGAGGATTAAAC+TGG 0.422240 8_1:+541179 Msa1171050:CDS
AGTTCTCAATAAAGTGGTCT+TGG 0.422601 8_1:+545446 Msa1171050:CDS
TTTGTAAAGACTGCTCTTGA+AGG 0.423621 8_1:+549833 Msa1171050:three_prime_UTR
TGAGGGAATAAAAGACTATC+AGG 0.424659 8_1:+548689 Msa1171050:CDS
TTCTTGCCAATATGAAGGTT+TGG 0.424999 8_1:+541497 Msa1171050:CDS
CAATTGCTAGTTGAATCCTT+TGG 0.425801 8_1:+549743 Msa1171050:three_prime_UTR
GCTTATGAAGGGCAGGGTGC+TGG 0.426792 8_1:+541549 Msa1171050:CDS
AGTGCTCTCTGAAATTCAAA+TGG 0.427234 8_1:-548602 None:intergenic
TCATCTTTCAAATGTATGGC+TGG 0.427731 8_1:-548765 None:intergenic
CCTCATTCCACAAATTTAAG+AGG 0.428520 8_1:+548364 Msa1171050:CDS
CATACACCTCTGCAGAAGTT+AGG 0.428738 8_1:+548310 Msa1171050:CDS
CATTCTCAACTCATGGATAC+TGG 0.430909 8_1:+546232 Msa1171050:CDS
AATGGAGCTATGGCATTCTC+TGG 0.431149 8_1:+542392 Msa1171050:CDS
TTCCAAGAATACATTTGAAA+AGG 0.432531 8_1:+542724 Msa1171050:CDS
AGCTGAGTCAATCCAAGCTT+TGG 0.433631 8_1:-548661 None:intergenic
AAGGATTTCAAGTTTGCAAC+AGG 0.433849 8_1:-546185 None:intergenic
ACAAAGAAGTGGCAAAGAAA+TGG 0.433855 8_1:+545008 Msa1171050:CDS
AGACTGCTCATAATTTCTAC+AGG 0.434012 8_1:-544259 None:intergenic
TCCACCGTCGCCACCGTCTC+CGG 0.434808 8_1:+540838 None:intergenic
ACAATGGGAGATTCTTTGTC+AGG 0.434854 8_1:+541786 Msa1171050:CDS
TACAGAAAGAGATGAAGTTA+GGG 0.435538 8_1:+545998 Msa1171050:CDS
TTCAACTGGACCAGCTTCAT+GGG 0.436333 8_1:-543113 None:intergenic
ATTGTACACAAGACAATTGC+TGG 0.436424 8_1:-542019 None:intergenic
TGGAGAAAATGGATCTGATT+TGG 0.437771 8_1:+541569 Msa1171050:CDS
CTCCATTTCTTGAGGATCCC+TGG 0.440270 8_1:-542376 None:intergenic
CAAGCCAGTTGGTTAGTGTA+TGG 0.441175 8_1:+547082 Msa1171050:CDS
TTCCAGGGATCCTCAAGAAA+TGG 0.441863 8_1:+542374 Msa1171050:CDS
CACATGCAAGCGCCCAGCAT+TGG 0.442219 8_1:-546141 None:intergenic
CTGTCTGTCTGAGGAAGAAA+AGG 0.442268 8_1:+547425 Msa1171050:CDS
TTTCTGGAAATGATGATAAG+AGG 0.445762 8_1:+541169 Msa1171050:CDS
ATATGAAGGGGATGTTGATT+GGG 0.448332 8_1:+542940 Msa1171050:CDS
GTCAAAGTTTCTACATCAAA+TGG 0.448775 8_1:+545297 Msa1171050:CDS
GGAAAACTATGGCTTGCATT+AGG 0.449799 8_1:+541056 Msa1171050:five_prime_UTR
TCAATCAATTTGTCCACAAA+AGG 0.453162 8_1:-549400 None:intergenic
TATTGCCTCTTGCTGACTGT+GGG 0.453331 8_1:+543822 Msa1171050:CDS
AGGTGAAAAGATGGGACTAA+TGG 0.456451 8_1:-549804 None:intergenic
AGCAGTTAGACCAGCAGGAC+CGG 0.456698 8_1:-544557 None:intergenic
TCCTCATAGCATTAGTAGTT+GGG 0.456735 8_1:+545589 Msa1171050:CDS
CCTCTTAAATTTGTGGAATG+AGG 0.457350 8_1:-548364 None:intergenic
AAAATGGTCTGGTGGTGTCT+TGG 0.458790 8_1:+548428 Msa1171050:CDS
GGTGTTTCTTGCCAATATGA+AGG 0.458995 8_1:+541492 Msa1171050:CDS
TCTTCCAATGTATGCACTAC+AGG 0.459012 8_1:+549566 Msa1171050:three_prime_UTR
ATGAAAGCTGAATCCATTGC+AGG 0.459441 8_1:-547273 None:intergenic
AGTGTTCTTGCCTTATAAAG+AGG 0.459833 8_1:-548957 None:intergenic
GTTTAGAGTATGCCCTTAAG+AGG 0.460212 8_1:+544953 Msa1171050:CDS
AGGAGATCTTAAAGCGGAAA+GGG 0.461107 8_1:+543149 Msa1171050:CDS
TCACTATAAAATAGTAAAGC+CGG 0.461633 8_1:-549710 None:intergenic
GAAGGGTCCGAAGAGAGATC+GGG 0.462427 8_1:+541401 Msa1171050:CDS
ACCCTAAGCTGTACAGATAG+AGG 0.463557 8_1:-549932 None:intergenic
TTCAGATTTAACTGTTTCAT+CGG 0.463903 8_1:-542588 None:intergenic
TACGGCAGAGGTGGAGGCAG+TGG 0.467304 8_1:+545953 Msa1171050:CDS
CAAGGGGACATGGCATATGA+AGG 0.468043 8_1:+542926 Msa1171050:CDS
GCTGACTTCCTTGTTTGCTG+TGG 0.468386 8_1:-547314 None:intergenic
GCAGTTTATACACCAAAGCT+TGG 0.468829 8_1:+548649 Msa1171050:CDS
ATATAGTCAACAGAGTCCTT+TGG 0.470116 8_1:-542665 None:intergenic
GAAGAATCAAGCTTCCCTCT+TGG 0.470196 8_1:-543031 None:intergenic
GTTGTTGAGTCATTAGGTAA+AGG 0.470360 8_1:+545201 Msa1171050:CDS
TCTAACAGGCCACAGTGAAA+TGG 0.471052 8_1:-549982 None:intergenic
AAAAGATGAAGGTGAAAAGA+TGG 0.471375 8_1:-549813 None:intergenic
TGTATTAAAGATCCAGCATC+AGG 0.474269 8_1:+547192 Msa1171050:CDS
AAATGGTCTGGTGGTGTCTT+GGG 0.474375 8_1:+548429 Msa1171050:CDS
TGATTATACGGCAGAGGTGG+AGG 0.475002 8_1:+545947 Msa1171050:CDS
AGGAAGACTTAGCAACTGTT+TGG 0.475029 8_1:-546165 None:intergenic
ACCTGCAATCTAAATACTCC+TGG 0.475506 8_1:-543177 None:intergenic
CAAACTTGAAATCCTTTGCT+GGG 0.475629 8_1:+546192 Msa1171050:CDS
AGTCCCTTAATAAAGCTTCC+CGG 0.475839 8_1:-546100 None:intergenic
CAAACCAACGCGGAAGGATC+TGG 0.475901 8_1:-544742 None:intergenic
GTTCTGGTTACTGTTCCATT+GGG 0.476255 8_1:+545342 Msa1171050:CDS
ATGTTTGAAACAGGACTCAA+TGG 0.476757 8_1:+546388 Msa1171050:intron
CGAGCAGCAGTTAGACCAGC+AGG 0.477469 8_1:-544562 None:intergenic
AGGGTTCAAATGCCTGTTCA+AGG 0.477662 8_1:+548790 Msa1171050:CDS
TGAAGGGTCCGAAGAGAGAT+CGG 0.479813 8_1:+541400 Msa1171050:CDS
CACTCTTCTGATGAAACAAT+GGG 0.480315 8_1:+541771 Msa1171050:CDS
CAATCTCAAGCAGCTGCAGC+AGG 0.480828 8_1:+548726 Msa1171050:CDS
TCAGTCACAACATATGCAAC+AGG 0.481041 8_1:-545711 None:intergenic
CCGGCTGGGTAACCTTGAAC+AGG 0.481763 8_1:-548802 None:intergenic
ATGAACCTATATTTAAACTA+AGG 0.482779 8_1:+541229 Msa1171050:CDS
CATACTCTAAACCATCTTCA+AGG 0.483362 8_1:-544942 None:intergenic
GGACAGTGCTTATGAAGGGC+AGG 0.485080 8_1:+541542 Msa1171050:CDS
TCTGCCTCAGGTGATCTGAT+AGG 0.485140 8_1:+544481 Msa1171050:CDS
CTAGAGGCAAGGAGTAGGAT+AGG 0.488024 8_1:+544619 Msa1171050:CDS
CTAGAACCCCGATCTCTCTT+CGG 0.490674 8_1:-541408 None:intergenic
ACAACATATGCAACAGGATC+AGG 0.490884 8_1:-545705 None:intergenic
ATGCGAATGTCCCTTGAAGA+TGG 0.492111 8_1:+544931 Msa1171050:CDS
CACACAATGTCGCAAGAGTT+GGG 0.492420 8_1:-546423 None:intergenic
TCCATAATCCTTCTTTCTTG+AGG 0.492566 8_1:-545045 None:intergenic
GCGTTGGTTTGTGCTCAGTT+GGG 0.492818 8_1:+544754 Msa1171050:CDS
ATTATGAGCAGTCTTATAGT+AGG 0.493004 8_1:+544268 Msa1171050:CDS
TGACGGCAAGGAATCAAGCC+TGG 0.494789 8_1:+545266 Msa1171050:CDS
ACTGTATTGCAGCGGTGAGT+AGG 0.495747 8_1:-540901 None:intergenic
CGATGCTCCAATAGCAACAT+AGG 0.495857 8_1:-545769 None:intergenic
CTATGTTGCTATTGGAGCAT+CGG 0.496253 8_1:+545770 Msa1171050:CDS
GGCTAAGCATTCTCAACTCA+TGG 0.496646 8_1:+546225 Msa1171050:CDS
GGGCTGAAAGCCCATGAAGC+TGG 0.497276 8_1:+543103 Msa1171050:CDS
TCCTCCGGAGACGGTGGCGA+CGG 0.497506 8_1:-540842 None:intergenic
TCTGTTGCTGATTCTGAAGA+TGG 0.497823 8_1:+544196 Msa1171050:CDS
CCGTCTCTCTCCCGAAATTG+GGG 0.499313 8_1:+542156 Msa1171050:CDS
TGGGTGTGCTGCTCTGCTTA+AGG 0.499496 8_1:+545092 Msa1171050:CDS
ACTTTGCTAATTTGGAGTAT+GGG 0.501714 8_1:+545073 Msa1171050:CDS
GATGGAGTTTCCTTTATTGT+TGG 0.502320 8_1:+544214 Msa1171050:CDS
CAAGCCATACACTAACCAAC+TGG 0.502737 8_1:-547086 None:intergenic
GCTCGCCACTTGCAACGTCT+GGG 0.502960 8_1:+544580 Msa1171050:CDS
GATGCAGTAGCAGTATCAGC+TGG 0.503297 8_1:+543082 Msa1171050:CDS
GCATATGTTGTGACTGATTG+GGG 0.508023 8_1:+545717 Msa1171050:CDS
AAATCAGATCCTAGCTCTCT+GGG 0.508027 8_1:+543781 Msa1171050:CDS
TATGTTGCTATTGGAGCATC+GGG 0.508708 8_1:+545771 Msa1171050:CDS
TTTCTAAAGGTACTATCTCT+AGG 0.509448 8_1:-542631 None:intergenic
TCTTACGGTCTCCGCACTCA+CGG 0.509553 8_1:+549503 Msa1171050:three_prime_UTR
TCTTCAAACTTCCAGAAGCC+TGG 0.511823 8_1:-549769 None:intergenic
CAAGGGACATTCGCATAGCC+TGG 0.512028 8_1:-544924 None:intergenic
TGTAGATATGGATGAAGCAC+TGG 0.512821 8_1:+544843 Msa1171050:CDS
ACCTGTCTTAAATCTGCCTC+AGG 0.513088 8_1:+544469 Msa1171050:CDS
TAATGTGGATTTGGCACTGA+AGG 0.515592 8_1:+541641 Msa1171050:CDS
GTCCTCATAGCATTAGTAGT+TGG 0.516550 8_1:+545588 Msa1171050:CDS
AAAAGCACTTGTTGCTGCTG+AGG 0.516565 8_1:+547479 Msa1171050:CDS
ATAAGGCAAGAACACTAGAC+AGG 0.517512 8_1:+548964 Msa1171050:CDS
TGTTGCCCAGAAGGGTGACC+AGG 0.517544 8_1:+544906 Msa1171050:CDS
ATGAGGGTATCTTTGGAAGC+TGG 0.517570 8_1:-548347 None:intergenic
CAAGGCTTTATCTGCATCTG+TGG 0.520566 8_1:-549206 None:intergenic
TACCAGAGTACTCTGCAAAC+CGG 0.520860 8_1:+549691 Msa1171050:three_prime_UTR
GTCAGTTCTTCTAGATCCCA+AGG 0.521737 8_1:+547363 Msa1171050:CDS
AGTGCTTCATCCATATCTAC+AGG 0.522027 8_1:-544841 None:intergenic
TTGGTGTCAGAGGGGACTGA+TGG 0.522166 8_1:+541282 Msa1171050:CDS
TGTTTGAAACAGGACTCAAT+GGG 0.522381 8_1:+546389 Msa1171050:intron
TTTGGCACTGAAGGGAATTG+AGG 0.523296 8_1:+541650 Msa1171050:CDS
GGGGCGTCTCCAATTATTGA+GGG 0.523469 8_1:+542176 Msa1171050:CDS
GGGAATGCTGTTGACTCCGT+TGG 0.523899 8_1:+541303 Msa1171050:CDS
CTCTTAAATTTGTGGAATGA+GGG 0.524085 8_1:-548363 None:intergenic
AATAAGGACAGTGCTTATGA+AGG 0.525349 8_1:+541537 Msa1171050:CDS
TCCGGAGACGGTGGCGACGG+TGG 0.526113 8_1:-540839 None:intergenic
GCACACAATGTCGCAAGAGT+TGG 0.526331 8_1:-546424 None:intergenic
CAATAGTCTTCTTGATGACA+TGG 0.526482 8_1:+544876 Msa1171050:CDS
TTCAGTGCCAAATCCACATT+AGG 0.526788 8_1:-541639 None:intergenic
AAGAAAGAAGGATTATGGAT+TGG 0.527224 8_1:+545049 Msa1171050:CDS
AAGCTTTGCTTGGTGTCAGA+GGG 0.527632 8_1:+541273 Msa1171050:CDS
TGGAATCAAGATGATGTGTA+TGG 0.528855 8_1:+545132 Msa1171050:CDS
ATTCCACAAATTTAAGAGGC+GGG 0.530024 8_1:+548368 Msa1171050:CDS
AAAATGATGAGAGTGATAGT+AGG 0.530394 8_1:+548403 Msa1171050:CDS
CGTTGATGTAGTAGCACAAG+AGG 0.530605 8_1:+541332 Msa1171050:CDS
GAAGCTTTGCTTGGTGTCAG+AGG 0.531969 8_1:+541272 Msa1171050:CDS
GGAATGCTGTTGACTCCGTT+GGG 0.532984 8_1:+541304 Msa1171050:CDS
TGTTAAGAAGAAGCTTTGCT+TGG 0.533161 8_1:+541263 Msa1171050:CDS
TGAAGGGGATGTTGATTGGG+AGG 0.536413 8_1:+542943 Msa1171050:CDS
GAATATTACACAGTTCTGCT+TGG 0.537914 8_1:-542226 None:intergenic
GGGATTCAGGATGGATTAAG+TGG 0.538347 8_1:+544412 Msa1171050:CDS
ACTTTATCACAATTGTGAAG+TGG 0.538615 8_1:+541035 Msa1171050:five_prime_UTR
GAAGCTTGAGTCTCTTCCTC+CGG 0.538796 8_1:-540857 None:intergenic
AGCTGTCAATTGAATGTAGA+GGG 0.540459 8_1:+541615 Msa1171050:CDS
TATCGCAGCCCCAGAGAGCT+AGG 0.541315 8_1:-543790 None:intergenic
AGAGGCAAGGAGTAGGATAG+GGG 0.541525 8_1:+544621 Msa1171050:CDS
TAAATCATCTGAAAATATAC+GGG 0.542197 8_1:+542319 Msa1171050:CDS
AATGCATCCTTTGGGTCAGA+AGG 0.542770 8_1:-542059 None:intergenic
AAATGACAGCTCTATTTCAC+AGG 0.543206 8_1:+548842 Msa1171050:CDS
TGTCATTTGCCACTCCATCA+TGG 0.544754 8_1:-548827 None:intergenic
GCAGTCTTTACAAAAGATGA+AGG 0.546176 8_1:-549824 None:intergenic
AGGACAGTCGCTGTTTAAAA+CGG 0.546441 8_1:-544788 None:intergenic
AGGTATCTTAACTCCTGCAA+TGG 0.546635 8_1:+547260 Msa1171050:CDS
TAGAGGCAAGGAGTAGGATA+GGG 0.546774 8_1:+544620 Msa1171050:CDS
TCTTGAGTCCTCAAGAAAGA+AGG 0.548499 8_1:+545037 Msa1171050:CDS
ACTAGACAGGGATGCATACA+AGG 0.548820 8_1:+548977 Msa1171050:CDS
AGAGTGATTGTCATTGGAGC+CGG 0.549522 8_1:+544538 Msa1171050:CDS
TGAGTCTCTTCCTCCGGAGA+CGG 0.549547 8_1:-540851 None:intergenic
GTTGCGGTGGAGTCTTCTGA+TGG 0.549704 8_1:+541462 Msa1171050:CDS
AAAGCGTCGGCAAGGGGACA+TGG 0.550327 8_1:+542916 Msa1171050:CDS
ACACTCTTCTGATGAAACAA+TGG 0.550379 8_1:+541770 Msa1171050:CDS
CATACATTTGAAAGATGAAG+AGG 0.552302 8_1:+548770 Msa1171050:CDS
GCTGAGGAGACAAGCAGAAG+AGG 0.552543 8_1:+545519 Msa1171050:CDS
TTTGGCTTTCAAGAAAAGGT+TGG 0.552604 8_1:-542979 None:intergenic
CAGGAGATCTTAAAGCGGAA+AGG 0.552805 8_1:+543148 Msa1171050:CDS
CAACTGAAGCTAAAGAAGAC+AGG 0.553779 8_1:+544305 Msa1171050:CDS
TAGTATTATCACCGGTGTTG+AGG 0.556947 8_1:+544696 Msa1171050:CDS
ATTTGGAGTTCTCAATAAAG+TGG 0.557153 8_1:+545440 Msa1171050:CDS
GTGCTCTCTGAAATTCAAAT+GGG 0.558598 8_1:-548601 None:intergenic
GGTATTGCTTGTTGCCCAGA+AGG 0.559715 8_1:+544897 Msa1171050:CDS
CTCAGGAGAAAGTGTTGCTG+TGG 0.559715 8_1:+548623 Msa1171050:CDS
TAGAAAATCGTGAACAGTCA+AGG 0.560185 8_1:-549224 None:intergenic
GGCAGAGGTGGAGGCAGTGG+AGG 0.562430 8_1:+545956 Msa1171050:CDS
GTTTCTGAAAATGTATTCCA+GGG 0.563072 8_1:+542359 Msa1171050:CDS
CAATTATGCGCACAGCCTCT+CGG 0.563087 8_1:-545905 None:intergenic
ATAATTGACTTATTGAACAC+TGG 0.563753 8_1:+545921 Msa1171050:CDS
TGCCATAGCTCCATTTCTTG+AGG 0.564038 8_1:-542384 None:intergenic
ATCAGCTGTTATGCGCCGCA+AGG 0.564762 8_1:+542889 Msa1171050:CDS
TGGAATGTCAAGAAAACAGT+GGG 0.565013 8_1:+545558 Msa1171050:CDS
ACCTCCTGTAGTGCATACAT+TGG 0.566170 8_1:-549570 None:intergenic
ATCCTCAAGAAATGGAGCTA+TGG 0.566321 8_1:+542382 Msa1171050:CDS
GCTCACCGTCAACAACACTT+TGG 0.566942 8_1:-542997 None:intergenic
GAAAGCCAAAGTGTTGTTGA+CGG 0.569661 8_1:+542992 Msa1171050:CDS
TGCAACCCAAAATTAGATGA+AGG 0.569971 8_1:+542416 Msa1171050:CDS
TGGTGTCAGAGGGGACTGAT+GGG 0.572116 8_1:+541283 Msa1171050:CDS
ATACTAGCACCAAGATCCAC+AGG 0.572161 8_1:-544679 None:intergenic
CCTGTTCAAGGTTACCCAGC+CGG 0.572787 8_1:+548802 Msa1171050:CDS
TCCGAAGAACCAATAATGCA+TGG 0.573325 8_1:-545659 None:intergenic
TTCTTCGAGAGCGTTCCAAA+CGG 0.573506 8_1:-544978 None:intergenic
CAGGACTCAATGGGGAAGGA+TGG 0.573760 8_1:+546398 Msa1171050:intron
TCCCAACTACTAATGCTATG+AGG 0.574836 8_1:-545590 None:intergenic
GCGGTGAGTAGGTAGAAAGA+AGG 0.574978 8_1:-540890 None:intergenic
CGAGGAGGTTCATCCTCAGA+AGG 0.575764 8_1:-543857 None:intergenic
CACCGGTGTTGAGGCTGATG+TGG 0.576174 8_1:+544705 Msa1171050:CDS
GGGAGCCAGAATGTGAATGA+TGG 0.576843 8_1:+541879 Msa1171050:CDS
CCTCTATATGACATAGTGAC+AGG 0.577296 8_1:+544808 Msa1171050:CDS
CGGTGCTCGAATCTTAAGCC+GGG 0.577755 8_1:+546082 Msa1171050:CDS
ATATTGCCTCTTGCTGACTG+TGG 0.578034 8_1:+543821 Msa1171050:CDS
TAGATACAAAGGATGAAGCA+AGG 0.578740 8_1:+542495 Msa1171050:CDS
CTGATGTCTTATCATCAAAG+TGG 0.579234 8_1:-542871 None:intergenic
GAATAGAAGAATATTTCCAC+GGG 0.579318 8_1:-545407 None:intergenic
GAAATTGCAGAGTTAGGGAC+TGG 0.580714 8_1:+548484 Msa1171050:CDS
ACGGTGCTCGAATCTTAAGC+CGG 0.580807 8_1:+546081 Msa1171050:CDS
GTCTCTTCCTCCGGAGACGG+TGG 0.581014 8_1:-540848 None:intergenic
TTGAATTTCAGAGAGCACTC+AGG 0.581455 8_1:+548606 Msa1171050:CDS
TCAGCCTTCAAGCAGCCCAA+TGG 0.582013 8_1:-545357 None:intergenic
AAAGATGAAGGTGAAAAGAT+GGG 0.582731 8_1:-549812 None:intergenic
CCTGTCACTATGTCATATAG+AGG 0.582794 8_1:-544808 None:intergenic
AGCCGGTTTGCAGAGTACTC+TGG 0.582890 8_1:-549693 None:intergenic
ACAATTGCTGGCTATCTCCA+TGG 0.583756 8_1:-542007 None:intergenic
GATGATGCTGTGGACTACTT+CGG 0.584381 8_1:+545489 Msa1171050:CDS
AAGGGGACATGGCATATGAA+GGG 0.584999 8_1:+542927 Msa1171050:CDS
AAGACCAGATCCTTCCGCGT+TGG 0.585001 8_1:+544738 Msa1171050:CDS
GATATGGATATGAAGACAGC+GGG 0.585939 8_1:+541591 Msa1171050:CDS
ACTCCATCATGGTTCCGGCT+GGG 0.587948 8_1:-548816 None:intergenic
ACGGGATAAAATTAATCACC+TGG 0.589242 8_1:+542337 Msa1171050:CDS
GTATTCTTGGAAGGTTGAGT+CGG 0.589856 8_1:-542713 None:intergenic
TTGTCCTCCTTCTGACCCAA+AGG 0.590131 8_1:+542052 Msa1171050:CDS
ACCTGAGGCAGATTTAAGAC+AGG 0.590463 8_1:-544470 None:intergenic
GAATGTAGAGGGGCCTAATG+TGG 0.590681 8_1:+541626 Msa1171050:CDS
TTGCTATAGCACGAATATCA+CGG 0.591828 8_1:-547062 None:intergenic
GACTGCTCATAATTTCTACA+GGG 0.592390 8_1:-544258 None:intergenic
GATTGACTCAGCTGATGGTG+AGG 0.592917 8_1:+548671 Msa1171050:CDS
TTCTTCCTCAGACAGACAGT+GGG 0.592972 8_1:-547421 None:intergenic
TGAATAGAAGAATATTTCCA+CGG 0.593682 8_1:-545408 None:intergenic
AAACTTTGACTTTATTACCC+AGG 0.594148 8_1:-545284 None:intergenic
ACTGTTTCATCGGACACTGT+AGG 0.595375 8_1:-542578 None:intergenic
TTTGTCAGGAAATTTACGAT+CGG 0.595423 8_1:+541800 Msa1171050:CDS
CATTCCACAAATTTAAGAGG+CGG 0.595760 8_1:+548367 Msa1171050:CDS
GACGGCAAGGAATCAAGCCT+GGG 0.595921 8_1:+545267 Msa1171050:CDS
TTGCGGTGGAGTCTTCTGAT+GGG 0.597256 8_1:+541463 Msa1171050:CDS
TCCAGAAGCCTGGCATCCAA+AGG 0.597809 8_1:-549759 None:intergenic
TTACCCAGCCGGAACCATGA+TGG 0.598085 8_1:+548813 Msa1171050:CDS
GGATCTTGATGTGTCTGAAG+GGG 0.599674 8_1:+541671 Msa1171050:CDS
CTCATCTCTTTCTGTCCCTG+TGG 0.601030 8_1:+544663 Msa1171050:CDS
TGATGTCTTATCATCAAAGT+GGG 0.601718 8_1:-542870 None:intergenic
AGCATTAGTAGTTGGGAAAG+CGG 0.602830 8_1:+545596 Msa1171050:CDS
ACAGATAGAGGGAATTCGTA+AGG 0.602863 8_1:-549920 None:intergenic
ATACTCTAAACCATCTTCAA+GGG 0.602891 8_1:-544941 None:intergenic
GCTATCTCCATGGCTGACGT+TGG 0.603129 8_1:-541997 None:intergenic
CAATGCTGGGCGCTTGCATG+TGG 0.603303 8_1:+546142 Msa1171050:CDS
AGAAACACACAATATTCCAA+AGG 0.603479 8_1:+542649 Msa1171050:CDS
CGAACCCCACAGTCAGCAAG+AGG 0.604709 8_1:-543827 None:intergenic
AGGATCTTGATGTGTCTGAA+GGG 0.604811 8_1:+541670 Msa1171050:CDS
AAGAAGGTGTTATGATTGCG+AGG 0.605492 8_1:+544381 Msa1171050:CDS
TCGCTCTTCTCTTATTAGGG+AGG 0.606768 8_1:+543877 Msa1171050:CDS
TTTCTTCCTCAGACAGACAG+TGG 0.606901 8_1:-547422 None:intergenic
ACTACTAATGCTATGAGGAC+CGG 0.607313 8_1:-545585 None:intergenic
GTGTGCTGCTCTGCTTAAGG+AGG 0.607737 8_1:+545095 Msa1171050:CDS
ATAAGGACAGTGCTTATGAA+GGG 0.608340 8_1:+541538 Msa1171050:CDS
GTAAGTTCAGAGCAGAAATG+TGG 0.608836 8_1:+541858 Msa1171050:CDS
AAGTGGCAAAGAAATGGAAG+AGG 0.608945 8_1:+545014 Msa1171050:CDS
TTCTCTGGAATTGAACTCTG+AGG 0.608977 8_1:-542803 None:intergenic
CTGTAACTGTACTAGAGGCA+AGG 0.609191 8_1:+544608 Msa1171050:CDS
ATCTTCAGAATCAGCAACAG+AGG 0.611191 8_1:-544194 None:intergenic
GGTCTGGTGGTGTCTTGGGA+AGG 0.611258 8_1:+548433 Msa1171050:CDS
TTGTACAAGAAGTCTTTAGA+CGG 0.611780 8_1:+546062 Msa1171050:CDS
ACCGTCGCCACCGTCTCCGG+AGG 0.612004 8_1:+540841 Msa1171050:five_prime_UTR
CTTGGTGCTAGTATTATCAC+CGG 0.612450 8_1:+544688 Msa1171050:CDS
AAAGAGCACCCTGATACAGT+TGG 0.613008 8_1:+545861 Msa1171050:CDS
TGTAGGATATAAACAACCAC+CGG 0.613279 8_1:-542561 None:intergenic
AATGTGGATTTGGCACTGAA+GGG 0.613758 8_1:+541642 Msa1171050:CDS
GAAACAGGACTCAATGGGGA+AGG 0.613879 8_1:+546394 Msa1171050:intron
CCCCAATTTCGGGAGAGAGA+CGG 0.614114 8_1:-542156 None:intergenic
GTAACAAACGTGTCTTATGA+CGG 0.614177 8_1:+545249 Msa1171050:CDS
GCACATTGTATGATTAAAGG+AGG 0.614292 8_1:+545168 Msa1171050:CDS
AATGAAGAAAAGTACAGCCA+AGG 0.614576 8_1:+549004 Msa1171050:CDS
CACATCATCTTGATTCCAGT+AGG 0.614607 8_1:-545127 None:intergenic
AAATGATTATACGGCAGAGG+TGG 0.616040 8_1:+545944 Msa1171050:CDS
TAGTAGCACAAGAGGATTTG+GGG 0.616403 8_1:+541340 Msa1171050:CDS
CTGTACTAGAGGCAAGGAGT+AGG 0.616479 8_1:+544614 Msa1171050:CDS
TGGAAATGATTATACGGCAG+AGG 0.616538 8_1:+545941 Msa1171050:CDS
TAAGTTCAGAGCAGAAATGT+GGG 0.617464 8_1:+541859 Msa1171050:CDS
GGCCACCAAAACCGTGAGTG+CGG 0.617560 8_1:-549514 None:intergenic
CCCTAAGCTGTACAGATAGA+GGG 0.619134 8_1:-549931 None:intergenic
GCTTGGATTGACTCAGCTGA+TGG 0.619659 8_1:+548666 Msa1171050:CDS
GATCTTGATGTGTCTGAAGG+GGG 0.619818 8_1:+541672 Msa1171050:CDS
GGATACCCACTGTCTGTCTG+AGG 0.620249 8_1:+547416 Msa1171050:CDS
TGAGCACAAACCAACGCGGA+AGG 0.620466 8_1:-544748 None:intergenic
TCCAATGTATGCACTACAGG+AGG 0.621094 8_1:+549569 Msa1171050:three_prime_UTR
ATTGTTCCTAACTTCTGCAG+AGG 0.621127 8_1:-548316 None:intergenic
GAGCACCCTGATACAGTTGG+TGG 0.621945 8_1:+545864 Msa1171050:CDS
GCATCCTTTGGGTCAGAAGG+AGG 0.623152 8_1:-542056 None:intergenic
AGAAGTAACGGACAAAGAAG+TGG 0.623607 8_1:+544997 Msa1171050:CDS
CAAATTGATTGAGAGACACA+TGG 0.624095 8_1:+549411 Msa1171050:CDS
GACAGTGCTTATGAAGGGCA+GGG 0.624270 8_1:+541543 Msa1171050:CDS
GCATCATCCCAAAACACACT+AGG 0.624568 8_1:-545474 None:intergenic
ATTGCCTCTTGCTGACTGTG+GGG 0.625193 8_1:+543823 Msa1171050:CDS
ATGGCTTGAAGTCTTTCGCA+AGG 0.625435 8_1:+547101 Msa1171050:CDS
ACATCATCTTGATTCCAGTA+GGG 0.625945 8_1:-545126 None:intergenic
GGAGCCAGAATGTGAATGAT+GGG 0.626477 8_1:+541880 Msa1171050:CDS
TCAGCTGTTATGCGCCGCAA+GGG 0.627221 8_1:+542890 Msa1171050:CDS
ACTATCAGGCCATAGAGAGA+TGG 0.628178 8_1:+548703 Msa1171050:CDS
ATATGCTGCTTCTGTGTCTG+AGG 0.628181 8_1:+542844 Msa1171050:CDS
GTCAGGGGCCCAGAATCACA+AGG 0.629360 8_1:-542296 None:intergenic
TAGCTGTCAATTGAATGTAG+AGG 0.629883 8_1:+541614 Msa1171050:CDS
ATGCAGTAGCAGTATCAGCT+GGG 0.630565 8_1:+543083 Msa1171050:CDS
ATACATTTGAAAGATGAAGA+GGG 0.630780 8_1:+548771 Msa1171050:CDS
GAGGATCTTGATGTGTCTGA+AGG 0.631647 8_1:+541669 Msa1171050:CDS
AAGACACGTTTGTTACAACA+TGG 0.632322 8_1:-545242 None:intergenic
ACAATGTTGAAAATAGTGCA+AGG 0.632537 8_1:+544122 Msa1171050:CDS
TTGCACCACCAACTGTATCA+GGG 0.632634 8_1:-545869 None:intergenic
CAAACAAGGAAGTCAGCAAG+CGG 0.633035 8_1:+547320 Msa1171050:CDS
TAAATCCCAGACGTTGCAAG+TGG 0.633469 8_1:-544585 None:intergenic
AAGAGAGATCGGGGTTCTAG+AGG 0.635653 8_1:+541411 Msa1171050:CDS
GGAGATCTTAAAGCGGAAAG+GGG 0.637876 8_1:+543150 Msa1171050:CDS
AAACGTGTCTTATGACGGCA+AGG 0.638761 8_1:+545254 Msa1171050:CDS
AGGGGACATGGCATATGAAG+GGG 0.639162 8_1:+542928 Msa1171050:CDS
TGGAATTGAACTCTGAGGAG+AGG 0.640172 8_1:-542798 None:intergenic
AGCTTCTTCTTAACACAGCG+TGG 0.641529 8_1:-541255 None:intergenic
GGTTCGTGATACTCCTTCTG+AGG 0.642166 8_1:+543844 Msa1171050:CDS
GAACGCTCTCGAAGAAGTAA+CGG 0.642697 8_1:+544985 Msa1171050:CDS
CTGACATTCTGGAATTATCG+AGG 0.642780 8_1:-548536 None:intergenic
CGTCTCTCTCCCGAAATTGG+GGG 0.643857 8_1:+542157 Msa1171050:CDS
GATGTGTATGGAGGATATGG+AGG 0.646123 8_1:+545144 Msa1171050:CDS
CAGCCGGAACCATGATGGAG+TGG 0.646273 8_1:+548818 Msa1171050:CDS
CATATGTTGTGACTGATTGG+GGG 0.648579 8_1:+545718 Msa1171050:CDS
GGATTAAGTGGAATTGTACA+CGG 0.648626 8_1:+544424 Msa1171050:CDS
ATTTACTGTAACTGTACTAG+AGG 0.654636 8_1:+544603 Msa1171050:CDS
AGCGCATTCTTAAACCAAGA+GGG 0.654741 8_1:+543017 Msa1171050:CDS
ATTGTTTCATCAGAAGAGTG+TGG 0.655751 8_1:-541768 None:intergenic
TTCTAATGTGAATGTTGCGG+TGG 0.657548 8_1:+541449 Msa1171050:CDS
ATTGACTCAGCTGATGGTGA+GGG 0.658867 8_1:+548672 Msa1171050:CDS
AGCTTTGCTTGGTGTCAGAG+GGG 0.659332 8_1:+541274 Msa1171050:CDS
AGTAGCACAAGAGGATTTGG+GGG 0.659909 8_1:+541341 Msa1171050:CDS
AGCCACATCAGCCTCAACAC+CGG 0.662555 8_1:-544707 None:intergenic
GATTAAGTGGAATTGTACAC+GGG 0.663154 8_1:+544425 Msa1171050:CDS
GAGATCTTAAAGCGGAAAGG+GGG 0.664509 8_1:+543151 Msa1171050:CDS
GTATTGCTTGTTGCCCAGAA+GGG 0.664639 8_1:+544898 Msa1171050:CDS
CTATGATACGTACTCAGAGG+TGG 0.669676 8_1:-547219 None:intergenic
TCGTGCTATAGCAAGCCAGT+TGG 0.669967 8_1:+547071 Msa1171050:CDS
GTTGGTGGTGCAATGATGAG+TGG 0.670548 8_1:+545879 Msa1171050:CDS
CATGATTCAAACATTCACGA+TGG 0.671334 8_1:+541948 Msa1171050:CDS
AGGCATTGGGAAAACAGTGA+AGG 0.671905 8_1:+547017 Msa1171050:intron
ACTGCTCATAATTTCTACAG+GGG 0.678264 8_1:-544257 None:intergenic
CTACTTCGGAGCAACAGCTG+AGG 0.682870 8_1:+545503 Msa1171050:CDS
CATTCCAGAACATAAAGCAG+TGG 0.683717 8_1:-545542 None:intergenic
CTAATAAGAGAAGAGCGAGG+AGG 0.684130 8_1:-543872 None:intergenic
CTTATGTGAGAGCAAGCACG+TGG 0.684332 8_1:-549535 None:intergenic
AAGGGTCCGAAGAGAGATCG+GGG 0.689737 8_1:+541402 Msa1171050:CDS
TAAGGCAAGAACACTAGACA+GGG 0.689972 8_1:+548965 Msa1171050:CDS
AAGACTATGATATATTAGGG+AGG 0.690542 8_1:+545796 Msa1171050:CDS
GAGGCAAGGAGTAGGATAGG+GGG 0.690769 8_1:+544622 Msa1171050:CDS
GAATGTCAAGAAAACAGTGG+GGG 0.690920 8_1:+545560 Msa1171050:CDS
TACATCAACGAATTTCCCAA+CGG 0.691061 8_1:-541319 None:intergenic
CAGTAGAGACTGTATTGCAG+CGG 0.693790 8_1:-540909 None:intergenic
ATCACCTATCAGATCACCTG+AGG 0.697217 8_1:-544485 None:intergenic
CAGGGGCCCAGAATCACAAG+GGG 0.698427 8_1:-542294 None:intergenic
GGATATGGATATGAAGACAG+CGG 0.699777 8_1:+541590 Msa1171050:CDS
GAGCGCATTCTTAAACCAAG+AGG 0.701538 8_1:+543016 Msa1171050:CDS
AAGGAAAAGACATCTAATGG+AGG 0.703439 8_1:+547120 Msa1171050:CDS
CTGGAATGTCAAGAAAACAG+TGG 0.703750 8_1:+545557 Msa1171050:CDS
AGATTCTAATGTGAATGTTG+CGG 0.703959 8_1:+541446 Msa1171050:CDS
TCAGGGGCCCAGAATCACAA+GGG 0.706196 8_1:-542295 None:intergenic
GTACTATGATACGTACTCAG+AGG 0.707263 8_1:-547222 None:intergenic
GCTGTCAATTGAATGTAGAG+GGG 0.712663 8_1:+541616 Msa1171050:CDS
TCCCTAATAAGAGAAGAGCG+AGG 0.713541 8_1:-543875 None:intergenic
CAACTGAGCACAAACCAACG+CGG 0.715681 8_1:-544752 None:intergenic
GATTTCAGGAGATCTTAAAG+CGG 0.716507 8_1:+543143 Msa1171050:CDS
AATCAGATCCTAGCTCTCTG+GGG 0.728824 8_1:+543782 Msa1171050:CDS
TACTAGCACCAAGATCCACA+GGG 0.732142 8_1:-544678 None:intergenic
GTTTGAAACAGGACTCAATG+GGG 0.732642 8_1:+546390 Msa1171050:intron
GTAGCACAAGAGGATTTGGG+GGG 0.739766 8_1:+541342 Msa1171050:CDS
AATCAAGATGATGTGTATGG+AGG 0.747805 8_1:+545135 Msa1171050:CDS
CAGCTGATAATCTCTCGCAG+CGG 0.757080 8_1:+548556 Msa1171050:CDS
GGAATGTCAAGAAAACAGTG+GGG 0.760759 8_1:+545559 Msa1171050:CDS
TATACATATCCATTTCACTG+TGG 0.763350 8_1:+549973 Msa1171050:three_prime_UTR
AATGATGAGTGGACTCCGAG+AGG 0.767514 8_1:+545890 Msa1171050:CDS
AATAGAAGAATATTTCCACG+GGG 0.772599 8_1:-545406 None:intergenic
ATAGAAGAATATTTCCACGG+GGG 0.805891 8_1:-545405 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAAAAAAAAGTTACT+TGG - chr8_1:543585-543604 None:intergenic 10.0%
!! TTTCAATTAAACAAATAAAA+AGG - chr8_1:549059-549078 None:intergenic 10.0%
!! ATTGAATTTATTATTTGTCT+TGG + chr8_1:543333-543352 Msa1171050:intron 15.0%
!!! ATTAAATTTTTGCTAAAAGA+TGG + chr8_1:543619-543638 Msa1171050:intron 15.0%
!!! TAGAATAATGATTTTCTTTT+CGG + chr8_1:544006-544025 Msa1171050:intron 15.0%
!!! TTTGTATCATAATTTTTTTC+AGG + chr8_1:544066-544085 Msa1171050:intron 15.0%
!!! TTGTATCATAATTTTTTTCA+GGG + chr8_1:544067-544086 Msa1171050:intron 15.0%
!! TATGGATAATAATGAAGATA+TGG + chr8_1:541146-541165 Msa1171050:exon 20.0%
!! ATGAACCTATATTTAAACTA+AGG + chr8_1:541229-541248 Msa1171050:CDS 20.0%
!! TGAAAAATCTTTGTTGAATA+AGG + chr8_1:541521-541540 Msa1171050:CDS 20.0%
!! CTAAATCATCTGAAAATATA+CGG + chr8_1:542318-542337 Msa1171050:CDS 20.0%
!! TAAATCATCTGAAAATATAC+GGG + chr8_1:542319-542338 Msa1171050:CDS 20.0%
!!! TCAGAAAATTTTAGATACAA+AGG + chr8_1:542484-542503 Msa1171050:CDS 20.0%
!! AATTCAATCAACATTCAAAA+AGG - chr8_1:543321-543340 None:intergenic 20.0%
!!! AAGGCTTTTGTTATAAATTA+TGG + chr8_1:543643-543662 Msa1171050:intron 20.0%
!! TCTATGTTAATAATGACAAA+AGG - chr8_1:543990-544009 None:intergenic 20.0%
!!! AGAATAATGATTTTCTTTTC+GGG + chr8_1:544007-544026 Msa1171050:intron 20.0%
!!! GTATCAATGTTTGTTTTTTT+CGG + chr8_1:546495-546514 Msa1171050:intron 20.0%
!!! TATCAATGTTTGTTTTTTTC+GGG + chr8_1:546496-546515 Msa1171050:intron 20.0%
!! TTACATTTAAATAGAGAATG+AGG + chr8_1:546789-546808 Msa1171050:intron 20.0%
!!! TTTTCTCTTTGATATATCTA+CGG - chr8_1:547172-547191 None:intergenic 20.0%
!! AAGTCAATTAATACTTTAAG+AGG + chr8_1:547580-547599 Msa1171050:intron 20.0%
!! TTGTCAATTTCTTATGTTAT+TGG + chr8_1:549157-549176 Msa1171050:intron 20.0%
!! TGTCAATTTCTTATGTTATT+GGG + chr8_1:549158-549177 Msa1171050:intron 20.0%
!! CACAAAATTACAGTAATTAA+AGG - chr8_1:549279-549298 None:intergenic 20.0%
! AATAATGAAGATATGGTTTC+TGG + chr8_1:541153-541172 Msa1171050:CDS 25.0%
! AATACTCCAAAAGATGAAAA+AGG + chr8_1:541717-541736 Msa1171050:CDS 25.0%
! ATACTCCAAAAGATGAAAAA+GGG + chr8_1:541718-541737 Msa1171050:CDS 25.0%
!! GTAAAATCACTGCATTTTAA+AGG - chr8_1:542251-542270 None:intergenic 25.0%
!! ATTTTCAGATGATTTAGTCA+GGG - chr8_1:542315-542334 None:intergenic 25.0%
!! TATTTTCAGATGATTTAGTC+AGG - chr8_1:542316-542335 None:intergenic 25.0%
! TTCAGATTTAACTGTTTCAT+CGG - chr8_1:542591-542610 None:intergenic 25.0%
! TGAAACAGTTAAATCTGAAT+TGG + chr8_1:542592-542611 Msa1171050:CDS 25.0%
!! TTTTCAAATGTATTCTTGGA+AGG - chr8_1:542725-542744 None:intergenic 25.0%
! TTCCAAGAATACATTTGAAA+AGG + chr8_1:542724-542743 Msa1171050:CDS 25.0%
!!! TGAAATCTGATTTTTTCAAC+TGG - chr8_1:543130-543149 None:intergenic 25.0%
! AGTTGAAAAAATCAGATTTC+AGG + chr8_1:543129-543148 Msa1171050:CDS 25.0%
!! GATTACATTCATCAGTATTT+TGG + chr8_1:543250-543269 Msa1171050:intron 25.0%
! AAAGGATGTAAAACAGTTAT+GGG - chr8_1:543303-543322 None:intergenic 25.0%
! AAAAGGATGTAAAACAGTTA+TGG - chr8_1:543304-543323 None:intergenic 25.0%
!! ACAAGATCTATCATCATTTT+TGG + chr8_1:543414-543433 Msa1171050:intron 25.0%
! TCTATATAAGATTGCATTGT+AGG - chr8_1:543487-543506 None:intergenic 25.0%
! CAATGCAATCTTATATAGAT+AGG + chr8_1:543488-543507 Msa1171050:intron 25.0%
!! ATAGGTAAATGTTCTTTTCT+AGG + chr8_1:543506-543525 Msa1171050:intron 25.0%
! TACTATTGTATCATAATGAC+TGG - chr8_1:543551-543570 None:intergenic 25.0%
!! ATTTTTGCTAAAAGATGGAA+AGG + chr8_1:543624-543643 Msa1171050:intron 25.0%
! GTATACATTTAAATGAGCAA+AGG - chr8_1:543968-543987 None:intergenic 25.0%
! TTTCAGGGTTATATAAATGT+TGG + chr8_1:544082-544101 Msa1171050:intron 25.0%
! AGGCATAATTATACACTTAT+AGG + chr8_1:544142-544161 Msa1171050:CDS 25.0%
! TATACACTTATAGGAGAAAA+AGG + chr8_1:544151-544170 Msa1171050:CDS 25.0%
! TTACACAACATGAAAAAAGA+AGG + chr8_1:544365-544384 Msa1171050:CDS 25.0%
! TGAATAGAAGAATATTTCCA+CGG - chr8_1:545411-545430 None:intergenic 25.0%
! GAGAAGACTATGATATATTA+GGG + chr8_1:545793-545812 Msa1171050:CDS 25.0%
! AAAAACAAACACTTATCAAC+TGG - chr8_1:545822-545841 None:intergenic 25.0%
!! ATAATTGACTTATTGAACAC+TGG + chr8_1:545921-545940 Msa1171050:CDS 25.0%
! AGGTAGTCATTATATATAGA+AGG - chr8_1:546299-546318 None:intergenic 25.0%
!!! GTTTTACTTTTTCATGACAA+AGG - chr8_1:546322-546341 None:intergenic 25.0%
!!! ATCAATGTTTGTTTTTTTCG+GGG + chr8_1:546497-546516 Msa1171050:intron 25.0%
! TGAAATAGTGAATTATCAAG+TGG + chr8_1:546634-546653 Msa1171050:intron 25.0%
! AAATACTTCATATACCCATA+AGG - chr8_1:546865-546884 None:intergenic 25.0%
!! TGGCTTATCTTTTCAATTAT+TGG + chr8_1:546991-547010 Msa1171050:intron 25.0%
!! ATCTTTTCAATTATTGGTGT+AGG + chr8_1:546997-547016 Msa1171050:intron 25.0%
!!! CATAGTACTTTTGAGAATAA+AGG + chr8_1:547237-547256 Msa1171050:CDS 25.0%
! TTCTAATGCTAATAATCTGT+TGG + chr8_1:547537-547556 Msa1171050:intron 25.0%
! ATAATCTGTTGGTATGTATA+TGG + chr8_1:547548-547567 Msa1171050:intron 25.0%
! TATGTAGATCTTATAAGACT+TGG + chr8_1:547769-547788 Msa1171050:intron 25.0%
! ATGTAGATCTTATAAGACTT+GGG + chr8_1:547770-547789 Msa1171050:intron 25.0%
!!! ATGATTTTAAACTCTGAGAA+GGG - chr8_1:547975-547994 None:intergenic 25.0%
! ACAAAAACTACTGAATCTTT+CGG - chr8_1:548280-548299 None:intergenic 25.0%
! ATACATTTGAAAGATGAAGA+GGG + chr8_1:548771-548790 Msa1171050:CDS 25.0%
! TTTACTTATGCCTCTTTATA+AGG + chr8_1:548947-548966 Msa1171050:CDS 25.0%
! AATTGAAAAATGCTACTCTA+TGG + chr8_1:549071-549090 Msa1171050:intron 25.0%
!! CTTGATAATTGATAGTTATG+AGG + chr8_1:549094-549113 Msa1171050:intron 25.0%
! ATTGAGATTATATACCAGAT+CGG - chr8_1:549125-549144 None:intergenic 25.0%
!! TTGTGCATTAATCCTATTTT+TGG + chr8_1:549294-549313 Msa1171050:intron 25.0%
! TTGGAATCTGTTTATTCTTA+CGG + chr8_1:549488-549507 Msa1171050:three_prime_UTR 25.0%
! TCACTATAAAATAGTAAAGC+CGG - chr8_1:549713-549732 None:intergenic 25.0%
!!! TAATACCCCATTTTTTTGAA+GGG + chr8_1:549865-549884 Msa1171050:three_prime_UTR 25.0%
ACTTTATCACAATTGTGAAG+TGG + chr8_1:541035-541054 Msa1171050:five_prime_UTR 30.0%
AATTGTGAAGTGGAAAACTA+TGG + chr8_1:541045-541064 Msa1171050:five_prime_UTR 30.0%
TCGTATTGCAACATTGAAAT+AGG + chr8_1:541084-541103 Msa1171050:five_prime_UTR 30.0%
CGTATTGCAACATTGAAATA+GGG + chr8_1:541085-541104 Msa1171050:five_prime_UTR 30.0%
! CATATTTTCTGTATAACCCT+AGG - chr8_1:541130-541149 None:intergenic 30.0%
CTAGGGTTATACAGAAAATA+TGG + chr8_1:541128-541147 Msa1171050:exon 30.0%
! TTTCTGGAAATGATGATAAG+AGG + chr8_1:541169-541188 Msa1171050:CDS 30.0%
TGATGATAAGAGGATTAAAC+TGG + chr8_1:541179-541198 Msa1171050:CDS 30.0%
AGGATTAAACTGGTAGAAAA+TGG + chr8_1:541189-541208 Msa1171050:CDS 30.0%
TAAACTGGTAGAAAATGGTT+TGG + chr8_1:541194-541213 Msa1171050:CDS 30.0%
GGCTTCCTTAGTTTAAATAT+AGG - chr8_1:541237-541256 None:intergenic 30.0%
!!! TTGTTTTAGGAAGAGATTGA+AGG + chr8_1:541383-541402 Msa1171050:CDS 30.0%
!!! TGTTTTAGGAAGAGATTGAA+GGG + chr8_1:541384-541403 Msa1171050:CDS 30.0%
AGATTCTAATGTGAATGTTG+CGG + chr8_1:541446-541465 Msa1171050:CDS 30.0%
TTTCATCCAAACCTTCATAT+TGG - chr8_1:541506-541525 None:intergenic 30.0%
!! AAATGGATCTGATTTGGATA+TGG + chr8_1:541575-541594 Msa1171050:CDS 30.0%
TACTCCAAAAGATGAAAAAG+GGG + chr8_1:541719-541738 Msa1171050:CDS 30.0%
TTTGTCAGGAAATTTACGAT+CGG + chr8_1:541800-541819 Msa1171050:CDS 30.0%
TTTCTTCTAATGCATCCTTT+GGG - chr8_1:542070-542089 None:intergenic 30.0%
GAAGAAAGAATTCTCAATGA+TGG + chr8_1:542083-542102 Msa1171050:CDS 30.0%
! TTTTCAGATGATTTAGTCAG+GGG - chr8_1:542314-542333 None:intergenic 30.0%
! GTTTCTGAAAATGTATTCCA+GGG + chr8_1:542359-542378 Msa1171050:CDS 30.0%
TCTGAAAGTAAGTTTGTCTA+TGG + chr8_1:542446-542465 Msa1171050:CDS 30.0%
GAAAAAAATTATGCAGCTTC+CGG + chr8_1:542542-542561 Msa1171050:CDS 30.0%
!! TTTCTAAAGGTACTATCTCT+AGG - chr8_1:542634-542653 None:intergenic 30.0%
! GGAATATTGTGTGTTTCTAA+AGG - chr8_1:542647-542666 None:intergenic 30.0%
AGAAACACACAATATTCCAA+AGG + chr8_1:542649-542668 Msa1171050:CDS 30.0%
! TCTAATACTGAACTGCATTT+TGG - chr8_1:542692-542711 None:intergenic 30.0%
! AGCCTTTTCAAATGTATTCT+TGG - chr8_1:542729-542748 None:intergenic 30.0%
TGATGTCTTATCATCAAAGT+GGG - chr8_1:542873-542892 None:intergenic 30.0%
!!! CATCAGTATTTTGGTTTTCA+CGG + chr8_1:543259-543278 Msa1171050:intron 30.0%
TAGGCCTACAAAACAATTTA+TGG + chr8_1:543525-543544 Msa1171050:intron 30.0%
!! TTCAACATTGTCTTTTAGAG+CGG - chr8_1:544113-544132 None:intergenic 30.0%
ACAATGTTGAAAATAGTGCA+AGG + chr8_1:544122-544141 Msa1171050:CDS 30.0%
TTTAGTCTGACCAACAATAA+AGG - chr8_1:544227-544246 None:intergenic 30.0%
! ATTATGAGCAGTCTTATAGT+AGG + chr8_1:544268-544287 Msa1171050:CDS 30.0%
ATTTACTGTAACTGTACTAG+AGG + chr8_1:544603-544622 Msa1171050:CDS 30.0%
ACAAAAAGTTCCTGTAGATA+TGG + chr8_1:544831-544850 Msa1171050:CDS 30.0%
ATACTCTAAACCATCTTCAA+GGG - chr8_1:544944-544963 None:intergenic 30.0%
AAGAAAGAAGGATTATGGAT+TGG + chr8_1:545049-545068 Msa1171050:CDS 30.0%
! ACTTTGCTAATTTGGAGTAT+GGG + chr8_1:545073-545092 Msa1171050:CDS 30.0%
TTGTTGAGTCATTAGGTAAA+GGG + chr8_1:545202-545221 Msa1171050:CDS 30.0%
TTGTTACAACATGGTTCAAA+TGG - chr8_1:545236-545255 None:intergenic 30.0%
! AAACTTTGACTTTATTACCC+AGG - chr8_1:545287-545306 None:intergenic 30.0%
GTCAAAGTTTCTACATCAAA+TGG + chr8_1:545297-545316 Msa1171050:CDS 30.0%
AATAGAAGAATATTTCCACG+GGG - chr8_1:545409-545428 None:intergenic 30.0%
GAATAGAAGAATATTTCCAC+GGG - chr8_1:545410-545429 None:intergenic 30.0%
! ATTTGGAGTTCTCAATAAAG+TGG + chr8_1:545440-545459 Msa1171050:CDS 30.0%
GGAGAAGACTATGATATATT+AGG + chr8_1:545792-545811 Msa1171050:CDS 30.0%
AAGACTATGATATATTAGGG+AGG + chr8_1:545796-545815 Msa1171050:CDS 30.0%
!!! GATAAGTGTTTGTTTTTTGC+TGG + chr8_1:545825-545844 Msa1171050:CDS 30.0%
GAACACTGGAAATGATTATA+CGG + chr8_1:545935-545954 Msa1171050:CDS 30.0%
ATACAGAAAGAGATGAAGTT+AGG + chr8_1:545997-546016 Msa1171050:CDS 30.0%
TACAGAAAGAGATGAAGTTA+GGG + chr8_1:545998-546017 Msa1171050:CDS 30.0%
AGACTTCTTGTACAATAAGT+TGG - chr8_1:546057-546076 None:intergenic 30.0%
TTGTACAAGAAGTCTTTAGA+CGG + chr8_1:546062-546081 Msa1171050:CDS 30.0%
TTAATGCAAAAACCAATGCT+GGG + chr8_1:546129-546148 Msa1171050:CDS 30.0%
!!! TTACTTTTTCATGACAAAGG+AGG - chr8_1:546319-546338 None:intergenic 30.0%
!! TGCTTGATAATGTTTGAAAC+AGG + chr8_1:546379-546398 Msa1171050:intron 30.0%
AGTAGATTATTCTGTTCTGA+GGG + chr8_1:546675-546694 Msa1171050:intron 30.0%
AGTAAGCGCTTATCATATAA+AGG + chr8_1:546748-546767 Msa1171050:intron 30.0%
! TAACATATTAACAAGGCGTT+TGG - chr8_1:546950-546969 None:intergenic 30.0%
CTGTGGATAACATATTAACA+AGG - chr8_1:546957-546976 None:intergenic 30.0%
!! AGTACTTTTGAGAATAAAGG+AGG + chr8_1:547240-547259 Msa1171050:CDS 30.0%
CTTCTCTGATGTTATGTATA+TGG + chr8_1:547506-547525 Msa1171050:intron 30.0%
! CTCTAAACAAGATTCTAAGA+TGG + chr8_1:547635-547654 Msa1171050:intron 30.0%
AAAAATGGACATCGAAAGTT+TGG - chr8_1:547700-547719 None:intergenic 30.0%
! CCATATCAAATTTGAGACTT+GGG - chr8_1:547838-547857 None:intergenic 30.0%
CCAAGTCTCAAATTTGATAT+GGG + chr8_1:547836-547855 Msa1171050:intron 30.0%
!! GACAATCTTATTCTAAGATC+AGG + chr8_1:547858-547877 Msa1171050:intron 30.0%
!! AATCTTATTCTAAGATCAGG+TGG + chr8_1:547861-547880 Msa1171050:intron 30.0%
! AGAGTACGAATAACTTTTGA+GGG - chr8_1:547942-547961 None:intergenic 30.0%
!! AAGAGTACGAATAACTTTTG+AGG - chr8_1:547943-547962 None:intergenic 30.0%
!! GATGATTTTAAACTCTGAGA+AGG - chr8_1:547976-547995 None:intergenic 30.0%
AAGAGACAGTTAATGATCTT+CGG - chr8_1:548239-548258 None:intergenic 30.0%
AAAAACTACTGAATCTTTCG+GGG - chr8_1:548278-548297 None:intergenic 30.0%
CAAAAACTACTGAATCTTTC+GGG - chr8_1:548279-548298 None:intergenic 30.0%
CTCTTAAATTTGTGGAATGA+GGG - chr8_1:548366-548385 None:intergenic 30.0%
AAAATGATGAGAGTGATAGT+AGG + chr8_1:548403-548422 Msa1171050:CDS 30.0%
AGAGTGATAGTAGGAAAAAA+TGG + chr8_1:548412-548431 Msa1171050:CDS 30.0%
! ATTCTAGAAATTGCAGAGTT+AGG + chr8_1:548478-548497 Msa1171050:CDS 30.0%
! TTCTAGAAATTGCAGAGTTA+GGG + chr8_1:548479-548498 Msa1171050:CDS 30.0%
CTCTTCATCTTTCAAATGTA+TGG - chr8_1:548772-548791 None:intergenic 30.0%
CATACATTTGAAAGATGAAG+AGG + chr8_1:548770-548789 Msa1171050:CDS 30.0%
AAGGAGAATCAAAGAATTGA+CGG - chr8_1:549040-549059 None:intergenic 30.0%
TGTTATTGGGAATAAGTTTC+AGG + chr8_1:549171-549190 Msa1171050:intron 30.0%
! ACGATTTTCTAGATTTCAAG+CGG + chr8_1:549236-549255 Msa1171050:CDS 30.0%
TTAATGGTCAAAAGCAAGAA+GGG - chr8_1:549327-549346 None:intergenic 30.0%
ATTAATGGTCAAAAGCAAGA+AGG - chr8_1:549328-549347 None:intergenic 30.0%
GTGACAATGGAAAGAATTAA+TGG - chr8_1:549343-549362 None:intergenic 30.0%
TCAATCAATTTGTCCACAAA+AGG - chr8_1:549403-549422 None:intergenic 30.0%
TAACACTAAGATTTCACATC+TGG - chr8_1:549445-549464 None:intergenic 30.0%
AAAGATGAAGGTGAAAAGAT+GGG - chr8_1:549815-549834 None:intergenic 30.0%
AAAAGATGAAGGTGAAAAGA+TGG - chr8_1:549816-549835 None:intergenic 30.0%
! CTTCAAAAAAATGGGGTATT+AGG - chr8_1:549866-549885 None:intergenic 30.0%
!!! CTAATACCCCATTTTTTTGA+AGG + chr8_1:549864-549883 Msa1171050:three_prime_UTR 30.0%
!!! AATACCCCATTTTTTTGAAG+GGG + chr8_1:549866-549885 Msa1171050:three_prime_UTR 30.0%
AAAACCCCTTCAAAAAAATG+GGG - chr8_1:549873-549892 None:intergenic 30.0%
GAAAACCCCTTCAAAAAAAT+GGG - chr8_1:549874-549893 None:intergenic 30.0%
AGAAAACCCCTTCAAAAAAA+TGG - chr8_1:549875-549894 None:intergenic 30.0%
TATACATATCCATTTCACTG+TGG + chr8_1:549973-549992 Msa1171050:three_prime_UTR 30.0%
AGTTGAAAAACGTGCTTCAA+TGG - chr8_1:541018-541037 None:intergenic 35.0%
CAACATTGAAATAGGGATTC+AGG + chr8_1:541092-541111 Msa1171050:five_prime_UTR 35.0%
!!! TCAGGTTTTGTTGAAAACCT+AGG + chr8_1:541110-541129 Msa1171050:five_prime_UTR 35.0%
!!! CAGGTTTTGTTGAAAACCTA+GGG + chr8_1:541111-541130 Msa1171050:five_prime_UTR 35.0%
TGTTAAGAAGAAGCTTTGCT+TGG + chr8_1:541263-541282 Msa1171050:CDS 35.0%
TACATCAACGAATTTCCCAA+CGG - chr8_1:541322-541341 None:intergenic 35.0%
!!! ATGATACGCTAGCTTGTTTT+AGG + chr8_1:541370-541389 Msa1171050:CDS 35.0%
TTCTTGCCAATATGAAGGTT+TGG + chr8_1:541497-541516 Msa1171050:CDS 35.0%
AATAAGGACAGTGCTTATGA+AGG + chr8_1:541537-541556 Msa1171050:CDS 35.0%
ATAAGGACAGTGCTTATGAA+GGG + chr8_1:541538-541557 Msa1171050:CDS 35.0%
TGGAGAAAATGGATCTGATT+TGG + chr8_1:541569-541588 Msa1171050:CDS 35.0%
TAGCTGTCAATTGAATGTAG+AGG + chr8_1:541614-541633 Msa1171050:CDS 35.0%
AGCTGTCAATTGAATGTAGA+GGG + chr8_1:541615-541634 Msa1171050:CDS 35.0%
!! TCAACCCCTTTTTCATCTTT+TGG - chr8_1:541726-541745 None:intergenic 35.0%
ATTGTTTCATCAGAAGAGTG+TGG - chr8_1:541771-541790 None:intergenic 35.0%
ACACTCTTCTGATGAAACAA+TGG + chr8_1:541770-541789 Msa1171050:CDS 35.0%
CACTCTTCTGATGAAACAAT+GGG + chr8_1:541771-541790 Msa1171050:CDS 35.0%
TAAGTTCAGAGCAGAAATGT+GGG + chr8_1:541859-541878 Msa1171050:CDS 35.0%
CATGATTCAAACATTCACGA+TGG + chr8_1:541948-541967 Msa1171050:CDS 35.0%
ATTGTACACAAGACAATTGC+TGG - chr8_1:542022-542041 None:intergenic 35.0%
CTTTCTTCTAATGCATCCTT+TGG - chr8_1:542071-542090 None:intergenic 35.0%
GAATATTACACAGTTCTGCT+TGG - chr8_1:542229-542248 None:intergenic 35.0%
! ATGCAGTGATTTTACTTCCA+AGG + chr8_1:542256-542275 Msa1171050:CDS 35.0%
ACGGGATAAAATTAATCACC+TGG + chr8_1:542337-542356 Msa1171050:CDS 35.0%
! GGAATACATTTTCAGAAACC+AGG - chr8_1:542358-542377 None:intergenic 35.0%
! GGTTTCTGAAAATGTATTCC+AGG + chr8_1:542358-542377 Msa1171050:CDS 35.0%
TGCAACCCAAAATTAGATGA+AGG + chr8_1:542416-542435 Msa1171050:CDS 35.0%
! GCACACCTTCATCTAATTTT+GGG - chr8_1:542424-542443 None:intergenic 35.0%
! TGCACACCTTCATCTAATTT+TGG - chr8_1:542425-542444 None:intergenic 35.0%
TAGATACAAAGGATGAAGCA+AGG + chr8_1:542495-542514 Msa1171050:CDS 35.0%
!! GAAGCAAGGATTTTTGTTTC+TGG + chr8_1:542509-542528 Msa1171050:CDS 35.0%
TGTAGGATATAAACAACCAC+CGG - chr8_1:542564-542583 None:intergenic 35.0%
ATATAGTCAACAGAGTCCTT+TGG - chr8_1:542668-542687 None:intergenic 35.0%
CTGATGTCTTATCATCAAAG+TGG - chr8_1:542874-542893 None:intergenic 35.0%
! ATATGAAGGGGATGTTGATT+GGG + chr8_1:542940-542959 Msa1171050:CDS 35.0%
!! TTTGGCTTTCAAGAAAAGGT+TGG - chr8_1:542982-543001 None:intergenic 35.0%
!! ACACTTTGGCTTTCAAGAAA+AGG - chr8_1:542986-543005 None:intergenic 35.0%
GATTTCAGGAGATCTTAAAG+CGG + chr8_1:543143-543162 Msa1171050:CDS 35.0%
TGTAATCTTTCTGTTGCAGA+GGG - chr8_1:543237-543256 None:intergenic 35.0%
ATGTAATCTTTCTGTTGCAG+AGG - chr8_1:543238-543257 None:intergenic 35.0%
!! TGCTTTTGTAAGTTTGGAGT+AGG + chr8_1:543439-543458 Msa1171050:intron 35.0%
! GTGAATTTTCTCCCAGTTTA+TGG + chr8_1:543461-543480 Msa1171050:intron 35.0%
!! CTGGCCATAAATTGTTTTGT+AGG - chr8_1:543532-543551 None:intergenic 35.0%
! TGTGTCATTGTTGATATCAC+TGG + chr8_1:544040-544059 Msa1171050:intron 35.0%
GATGGAGTTTCCTTTATTGT+TGG + chr8_1:544214-544233 Msa1171050:CDS 35.0%
ACTGCTCATAATTTCTACAG+GGG - chr8_1:544260-544279 None:intergenic 35.0%
GACTGCTCATAATTTCTACA+GGG - chr8_1:544261-544280 None:intergenic 35.0%
AGACTGCTCATAATTTCTAC+AGG - chr8_1:544262-544281 None:intergenic 35.0%
!! AGACAGGATGAGTTTTAATG+TGG + chr8_1:544321-544340 Msa1171050:CDS 35.0%
GGATTAAGTGGAATTGTACA+CGG + chr8_1:544424-544443 Msa1171050:CDS 35.0%
GATTAAGTGGAATTGTACAC+GGG + chr8_1:544425-544444 Msa1171050:CDS 35.0%
AGAAAGAGAGTGATTGTCAT+TGG + chr8_1:544532-544551 Msa1171050:CDS 35.0%
! CAATAGTCTTCTTGATGACA+TGG + chr8_1:544876-544895 Msa1171050:CDS 35.0%
CATACTCTAAACCATCTTCA+AGG - chr8_1:544945-544964 None:intergenic 35.0%
ACAAAGAAGTGGCAAAGAAA+TGG + chr8_1:545008-545027 Msa1171050:CDS 35.0%
TCCTCAAGAAAGAAGGATTA+TGG + chr8_1:545044-545063 Msa1171050:CDS 35.0%
TCCATAATCCTTCTTTCTTG+AGG - chr8_1:545048-545067 None:intergenic 35.0%
! CACTTTGCTAATTTGGAGTA+TGG + chr8_1:545072-545091 Msa1171050:CDS 35.0%
ACATCATCTTGATTCCAGTA+GGG - chr8_1:545129-545148 None:intergenic 35.0%
TGGAATCAAGATGATGTGTA+TGG + chr8_1:545132-545151 Msa1171050:CDS 35.0%
AATCAAGATGATGTGTATGG+AGG + chr8_1:545135-545154 Msa1171050:CDS 35.0%
GGAGCACATTGTATGATTAA+AGG + chr8_1:545165-545184 Msa1171050:CDS 35.0%
GCACATTGTATGATTAAAGG+AGG + chr8_1:545168-545187 Msa1171050:CDS 35.0%
GTTGTTGAGTCATTAGGTAA+AGG + chr8_1:545201-545220 Msa1171050:CDS 35.0%
! AAGACACGTTTGTTACAACA+TGG - chr8_1:545245-545264 None:intergenic 35.0%
GTAACAAACGTGTCTTATGA+CGG + chr8_1:545249-545268 Msa1171050:CDS 35.0%
TCAAATGGCAATGAGTTCTT+TGG + chr8_1:545312-545331 Msa1171050:CDS 35.0%
ATAGAAGAATATTTCCACGG+GGG - chr8_1:545408-545427 None:intergenic 35.0%
TATTCTTCTATTCAGCGTCT+TGG + chr8_1:545417-545436 Msa1171050:CDS 35.0%
AGTTCTCAATAAAGTGGTCT+TGG + chr8_1:545446-545465 Msa1171050:CDS 35.0%
! TGGAATTTCCTAGTGTGTTT+TGG + chr8_1:545466-545485 Msa1171050:CDS 35.0%
! GGAATTTCCTAGTGTGTTTT+GGG + chr8_1:545467-545486 Msa1171050:CDS 35.0%
TGGAATGTCAAGAAAACAGT+GGG + chr8_1:545558-545577 Msa1171050:CDS 35.0%
TCCTCATAGCATTAGTAGTT+GGG + chr8_1:545589-545608 Msa1171050:CDS 35.0%
GCTTAAATTCTGACCATCTA+TGG - chr8_1:545622-545641 None:intergenic 35.0%
!! ACCATGCATTATTGGTTCTT+CGG + chr8_1:545658-545677 Msa1171050:CDS 35.0%
!! TTGGTTCTTCGGAAACTTTT+TGG + chr8_1:545669-545688 Msa1171050:CDS 35.0%
! TGGTTCTTCGGAAACTTTTT+GGG + chr8_1:545670-545689 Msa1171050:CDS 35.0%
TTGCATATGTTGTGACTGAT+TGG + chr8_1:545715-545734 Msa1171050:CDS 35.0%
TGCATATGTTGTGACTGATT+GGG + chr8_1:545716-545735 Msa1171050:CDS 35.0%
!!! CAGCATTGGTTTTTGCATTA+AGG - chr8_1:546130-546149 None:intergenic 35.0%
CTTAATGCAAAAACCAATGC+TGG + chr8_1:546128-546147 Msa1171050:CDS 35.0%
!! AAGGATTTCAAGTTTGCAAC+AGG - chr8_1:546188-546207 None:intergenic 35.0%
CAAACTTGAAATCCTTTGCT+GGG + chr8_1:546192-546211 Msa1171050:CDS 35.0%
! ATGTTTGAAACAGGACTCAA+TGG + chr8_1:546388-546407 Msa1171050:intron 35.0%
! TGTTTGAAACAGGACTCAAT+GGG + chr8_1:546389-546408 Msa1171050:intron 35.0%
CAGTAGATTATTCTGTTCTG+AGG + chr8_1:546674-546693 Msa1171050:intron 35.0%
! GTAGATTATTCTGTTCTGAG+GGG + chr8_1:546676-546695 Msa1171050:intron 35.0%
TCATATGTGTTAGGAAGAGT+TGG + chr8_1:546699-546718 Msa1171050:intron 35.0%
AGTTGGTTGAATACACCTTA+TGG + chr8_1:546847-546866 Msa1171050:intron 35.0%
GTTGGTTGAATACACCTTAT+GGG + chr8_1:546848-546867 Msa1171050:intron 35.0%
GAAAAGATAAGCCAAAACAG+TGG - chr8_1:546985-547004 None:intergenic 35.0%
TCAATTATTGGTGTAGGCAT+TGG + chr8_1:547003-547022 Msa1171050:intron 35.0%
CAATTATTGGTGTAGGCATT+GGG + chr8_1:547004-547023 Msa1171050:intron 35.0%
TTGCTATAGCACGAATATCA+CGG - chr8_1:547065-547084 None:intergenic 35.0%
AAGGAAAAGACATCTAATGG+AGG + chr8_1:547120-547139 Msa1171050:CDS 35.0%
TGTATTAAAGATCCAGCATC+AGG + chr8_1:547192-547211 Msa1171050:CDS 35.0%
AAAAAATCCCACAGCAAACA+AGG + chr8_1:547306-547325 Msa1171050:CDS 35.0%
! TGTTTTTCCTGTTGAACCTT+GGG - chr8_1:547382-547401 None:intergenic 35.0%
AAAAACAGACATCGAGATGA+AGG + chr8_1:547395-547414 Msa1171050:CDS 35.0%
! AAGTGAAACAGGTTTAGGAT+TGG - chr8_1:547669-547688 None:intergenic 35.0%
AAGGTAAGTGAAACAGGTTT+AGG - chr8_1:547674-547693 None:intergenic 35.0%
!!! TGTCCATTTTTTTGAGTGAG+AGG + chr8_1:547709-547728 Msa1171050:intron 35.0%
!!! GTCCATTTTTTTGAGTGAGA+GGG + chr8_1:547710-547729 Msa1171050:intron 35.0%
CCCAAGTCTCAAATTTGATA+TGG + chr8_1:547835-547854 Msa1171050:intron 35.0%
! CCCATATCAAATTTGAGACT+TGG - chr8_1:547839-547858 None:intergenic 35.0%
!! TGTTTGCTATATGAAGGTGA+AGG - chr8_1:548014-548033 None:intergenic 35.0%
TTCACCTTCATATAGCAAAC+AGG + chr8_1:548013-548032 Msa1171050:intron 35.0%
TCACCTTCATATAGCAAACA+GGG + chr8_1:548014-548033 Msa1171050:intron 35.0%
ATCATTAACTGTCTCTTGAC+AGG + chr8_1:548242-548261 Msa1171050:intron 35.0%
!! CAGTAGTTTTTGTTGATTGC+AGG + chr8_1:548287-548306 Msa1171050:intron 35.0%
CCTCTTAAATTTGTGGAATG+AGG - chr8_1:548367-548386 None:intergenic 35.0%
CCTCATTCCACAAATTTAAG+AGG + chr8_1:548364-548383 Msa1171050:CDS 35.0%
CATTCCACAAATTTAAGAGG+CGG + chr8_1:548367-548386 Msa1171050:CDS 35.0%
ATTCCACAAATTTAAGAGGC+GGG + chr8_1:548368-548387 Msa1171050:CDS 35.0%
GATAGTAGGAAAAAATGGTC+TGG + chr8_1:548417-548436 Msa1171050:CDS 35.0%
!! GTGCTCTCTGAAATTCAAAT+GGG - chr8_1:548604-548623 None:intergenic 35.0%
!! AGTGCTCTCTGAAATTCAAA+TGG - chr8_1:548605-548624 None:intergenic 35.0%
TGAGGGAATAAAAGACTATC+AGG + chr8_1:548689-548708 Msa1171050:CDS 35.0%
TTTCAAATGTATGGCTGGAT+TGG - chr8_1:548763-548782 None:intergenic 35.0%
TCATCTTTCAAATGTATGGC+TGG - chr8_1:548768-548787 None:intergenic 35.0%
AAATGACAGCTCTATTTCAC+AGG + chr8_1:548842-548861 Msa1171050:CDS 35.0%
TTCACAGGTTACTGTGAATA+AGG + chr8_1:548857-548876 Msa1171050:CDS 35.0%
AACTCAAAAAGTCATTCTCG+AGG + chr8_1:548882-548901 Msa1171050:CDS 35.0%
AGGAGCAGATTGTATCAAAA+AGG + chr8_1:548902-548921 Msa1171050:CDS 35.0%
AGTGTTCTTGCCTTATAAAG+AGG - chr8_1:548960-548979 None:intergenic 35.0%
! AATGAAGAAAAGTACAGCCA+AGG + chr8_1:549004-549023 Msa1171050:CDS 35.0%
TTGACGGGAAAAAATTACCT+TGG - chr8_1:549024-549043 None:intergenic 35.0%
AGGAGAATCAAAGAATTGAC+GGG - chr8_1:549039-549058 None:intergenic 35.0%
TAGAAAATCGTGAACAGTCA+AGG - chr8_1:549227-549246 None:intergenic 35.0%
AGATTTCAAGCGGAAGAATA+AGG + chr8_1:549246-549265 Msa1171050:CDS 35.0%
AAGGGAATCATGCCAAAAAT+AGG - chr8_1:549309-549328 None:intergenic 35.0%
TTTCCATTGTCACTGAGTTT+GGG + chr8_1:549350-549369 Msa1171050:intron 35.0%
CAAATTGATTGAGAGACACA+TGG + chr8_1:549411-549430 Msa1171050:CDS 35.0%
CAATTGCTAGTTGAATCCTT+TGG + chr8_1:549743-549762 Msa1171050:three_prime_UTR 35.0%
GCAGTCTTTACAAAAGATGA+AGG - chr8_1:549827-549846 None:intergenic 35.0%
TTTGTAAAGACTGCTCTTGA+AGG + chr8_1:549833-549852 Msa1171050:three_prime_UTR 35.0%
! TTGAAGGGGTTTTCTTTTGA+TGG + chr8_1:549880-549899 Msa1171050:three_prime_UTR 35.0%
GAACAATACTGTGTTCTAAC+AGG - chr8_1:549999-550018 None:intergenic 35.0%
GCTTCAATGGCGATTCTAAT+TGG - chr8_1:541005-541024 None:intergenic 40.0%
! GGAAAACTATGGCTTGCATT+AGG + chr8_1:541056-541075 Msa1171050:five_prime_UTR 40.0%
TGTAGTAGCACAAGAGGATT+TGG + chr8_1:541338-541357 Msa1171050:CDS 40.0%
GTAGTAGCACAAGAGGATTT+GGG + chr8_1:541339-541358 Msa1171050:CDS 40.0%
TAGTAGCACAAGAGGATTTG+GGG + chr8_1:541340-541359 Msa1171050:CDS 40.0%
TTCTAATGTGAATGTTGCGG+TGG + chr8_1:541449-541468 Msa1171050:CDS 40.0%
GGTGTTTCTTGCCAATATGA+AGG + chr8_1:541492-541511 Msa1171050:CDS 40.0%
GGATATGGATATGAAGACAG+CGG + chr8_1:541590-541609 Msa1171050:CDS 40.0%
GATATGGATATGAAGACAGC+GGG + chr8_1:541591-541610 Msa1171050:CDS 40.0%
GCTGTCAATTGAATGTAGAG+GGG + chr8_1:541616-541635 Msa1171050:CDS 40.0%
TTCAGTGCCAAATCCACATT+AGG - chr8_1:541642-541661 None:intergenic 40.0%
! TAATGTGGATTTGGCACTGA+AGG + chr8_1:541641-541660 Msa1171050:CDS 40.0%
! AATGTGGATTTGGCACTGAA+GGG + chr8_1:541642-541661 Msa1171050:CDS 40.0%
AGGATCTTGATGTGTCTGAA+GGG + chr8_1:541670-541689 Msa1171050:CDS 40.0%
! GTTGATGTTTTGCTTGATGC+TGG + chr8_1:541741-541760 Msa1171050:CDS 40.0%
ACAATGGGAGATTCTTTGTC+AGG + chr8_1:541786-541805 Msa1171050:CDS 40.0%
GTAAGTTCAGAGCAGAAATG+TGG + chr8_1:541858-541877 Msa1171050:CDS 40.0%
TCAACCCATCATTCACATTC+TGG - chr8_1:541887-541906 None:intergenic 40.0%
!!! TTCTGGCACTTTTGGAGTTA+AGG - chr8_1:541911-541930 None:intergenic 40.0%
!! AGCAGTTTTTCTGGCACTTT+TGG - chr8_1:541919-541938 None:intergenic 40.0%
AAAAAACAGGGATCGGCTAA+TGG - chr8_1:541975-541994 None:intergenic 40.0%
GTTGGCTAAAAAACAGGGAT+CGG - chr8_1:541982-542001 None:intergenic 40.0%
! CTGACGTTGGCTAAAAAACA+GGG - chr8_1:541987-542006 None:intergenic 40.0%
! GGAGAACTTTTCTTTGTCCT+TGG - chr8_1:542276-542295 None:intergenic 40.0%
ATCCTCAAGAAATGGAGCTA+TGG + chr8_1:542382-542401 Msa1171050:CDS 40.0%
AAAAATTATGCAGCTTCCGG+TGG + chr8_1:542545-542564 Msa1171050:CDS 40.0%
GTATTCTTGGAAGGTTGAGT+CGG - chr8_1:542716-542735 None:intergenic 40.0%
GAAAAGGCTTCTCTTGCAAA+TGG + chr8_1:542740-542759 Msa1171050:CDS 40.0%
GGCATCTTCAGTTTCTCTAT+TGG - chr8_1:542780-542799 None:intergenic 40.0%
!! TTCTCTGGAATTGAACTCTG+AGG - chr8_1:542806-542825 None:intergenic 40.0%
! GCAGAATTCTCAGTTTTCTC+TGG - chr8_1:542821-542840 None:intergenic 40.0%
CATATGAAGGGGATGTTGAT+TGG + chr8_1:542939-542958 Msa1171050:CDS 40.0%
!! GAAAGCCAAAGTGTTGTTGA+CGG + chr8_1:542992-543011 Msa1171050:CDS 40.0%
AGCGCATTCTTAAACCAAGA+GGG + chr8_1:543017-543036 Msa1171050:CDS 40.0%
AGGAGATCTTAAAGCGGAAA+GGG + chr8_1:543149-543168 Msa1171050:CDS 40.0%
!! TCCAGGAGTATTTAGATTGC+AGG + chr8_1:543176-543195 Msa1171050:CDS 40.0%
ACCTGCAATCTAAATACTCC+TGG - chr8_1:543180-543199 None:intergenic 40.0%
GTAATCTTTCTGTTGCAGAG+GGG - chr8_1:543236-543255 None:intergenic 40.0%
! TTGGCGTGCTTTTGTAAGTT+TGG + chr8_1:543433-543452 Msa1171050:intron 40.0%
TGCATTGTAGGCCATAAACT+GGG - chr8_1:543475-543494 None:intergenic 40.0%
TTGCATTGTAGGCCATAAAC+TGG - chr8_1:543476-543495 None:intergenic 40.0%
! AAATCAGATCCTAGCTCTCT+GGG + chr8_1:543781-543800 Msa1171050:CDS 40.0%
TCCTCGCTCTTCTCTTATTA+GGG + chr8_1:543874-543893 Msa1171050:CDS 40.0%
ATCTTCAGAATCAGCAACAG+AGG - chr8_1:544197-544216 None:intergenic 40.0%
!! TCTGTTGCTGATTCTGAAGA+TGG + chr8_1:544196-544215 Msa1171050:CDS 40.0%
! CTTCTTTAGCTTCAGTTGTC+AGG - chr8_1:544303-544322 None:intergenic 40.0%
CAACTGAAGCTAAAGAAGAC+AGG + chr8_1:544305-544324 Msa1171050:CDS 40.0%
!! CAGGATGAGTTTTAATGTGG+TGG + chr8_1:544324-544343 Msa1171050:CDS 40.0%
!! GAGTTTTAATGTGGTGGCAA+TGG + chr8_1:544330-544349 Msa1171050:CDS 40.0%
!! AAGAAGGTGTTATGATTGCG+AGG + chr8_1:544381-544400 Msa1171050:CDS 40.0%
TATGATTGCGAGGAAAAAGC+TGG + chr8_1:544391-544410 Msa1171050:CDS 40.0%
ATGATTGCGAGGAAAAAGCT+GGG + chr8_1:544392-544411 Msa1171050:CDS 40.0%
!! CTTGGTGCTAGTATTATCAC+CGG + chr8_1:544688-544707 Msa1171050:CDS 40.0%
! TAGTATTATCACCGGTGTTG+AGG + chr8_1:544696-544715 Msa1171050:CDS 40.0%
AGGACAGTCGCTGTTTAAAA+CGG - chr8_1:544791-544810 None:intergenic 40.0%
CCTGTCACTATGTCATATAG+AGG - chr8_1:544811-544830 None:intergenic 40.0%
CCTCTATATGACATAGTGAC+AGG + chr8_1:544808-544827 Msa1171050:CDS 40.0%
AGTGCTTCATCCATATCTAC+AGG - chr8_1:544844-544863 None:intergenic 40.0%
TGTAGATATGGATGAAGCAC+TGG + chr8_1:544843-544862 Msa1171050:CDS 40.0%
! GTTTAGAGTATGCCCTTAAG+AGG + chr8_1:544953-544972 Msa1171050:CDS 40.0%
!! AGAAGTAACGGACAAAGAAG+TGG + chr8_1:544997-545016 Msa1171050:CDS 40.0%
AAGTGGCAAAGAAATGGAAG+AGG + chr8_1:545014-545033 Msa1171050:CDS 40.0%
TCTTGAGTCCTCAAGAAAGA+AGG + chr8_1:545037-545056 Msa1171050:CDS 40.0%
! GGATTGGCACTTTGCTAATT+TGG + chr8_1:545065-545084 Msa1171050:CDS 40.0%
CACATCATCTTGATTCCAGT+AGG - chr8_1:545130-545149 None:intergenic 40.0%
GATGATGTGTATGGAGGATA+TGG + chr8_1:545141-545160 Msa1171050:CDS 40.0%
AGCACTGTTGTTGAGTCATT+AGG + chr8_1:545195-545214 Msa1171050:CDS 40.0%
! TGTTCTGGTTACTGTTCCAT+TGG + chr8_1:545341-545360 Msa1171050:CDS 40.0%
! GTTCTGGTTACTGTTCCATT+GGG + chr8_1:545342-545361 Msa1171050:CDS 40.0%
TCTATTCAGCGTCTTGGATT+TGG + chr8_1:545423-545442 Msa1171050:CDS 40.0%
CATTCCAGAACATAAAGCAG+TGG - chr8_1:545545-545564 None:intergenic 40.0%
CTGGAATGTCAAGAAAACAG+TGG + chr8_1:545557-545576 Msa1171050:CDS 40.0%
GGAATGTCAAGAAAACAGTG+GGG + chr8_1:545559-545578 Msa1171050:CDS 40.0%
GAATGTCAAGAAAACAGTGG+GGG + chr8_1:545560-545579 Msa1171050:CDS 40.0%
ACTACTAATGCTATGAGGAC+CGG - chr8_1:545588-545607 None:intergenic 40.0%
GTCCTCATAGCATTAGTAGT+TGG + chr8_1:545588-545607 Msa1171050:CDS 40.0%
TCCCAACTACTAATGCTATG+AGG - chr8_1:545593-545612 None:intergenic 40.0%
AGCATTAGTAGTTGGGAAAG+CGG + chr8_1:545596-545615 Msa1171050:CDS 40.0%
TCACGTCAACCATGCATTAT+TGG + chr8_1:545650-545669 Msa1171050:CDS 40.0%
TCCGAAGAACCAATAATGCA+TGG - chr8_1:545662-545681 None:intergenic 40.0%
! GGTTCTTCGGAAACTTTTTG+GGG + chr8_1:545671-545690 Msa1171050:CDS 40.0%
ACAACATATGCAACAGGATC+AGG - chr8_1:545708-545727 None:intergenic 40.0%
TCAGTCACAACATATGCAAC+AGG - chr8_1:545714-545733 None:intergenic 40.0%
GCATATGTTGTGACTGATTG+GGG + chr8_1:545717-545736 Msa1171050:CDS 40.0%
CATATGTTGTGACTGATTGG+GGG + chr8_1:545718-545737 Msa1171050:CDS 40.0%
GAGTAAGCACCATAGCTAAA+AGG - chr8_1:545750-545769 None:intergenic 40.0%
GCTTACTCCTATGTTGCTAT+TGG + chr8_1:545762-545781 Msa1171050:CDS 40.0%
! CTATGTTGCTATTGGAGCAT+CGG + chr8_1:545770-545789 Msa1171050:CDS 40.0%
! TATGTTGCTATTGGAGCATC+GGG + chr8_1:545771-545790 Msa1171050:CDS 40.0%
TGGAAATGATTATACGGCAG+AGG + chr8_1:545941-545960 Msa1171050:CDS 40.0%
AAATGATTATACGGCAGAGG+TGG + chr8_1:545944-545963 Msa1171050:CDS 40.0%
!! TAAGCCGGGAAGCTTTATTA+AGG + chr8_1:546096-546115 Msa1171050:CDS 40.0%
!! AAGCCGGGAAGCTTTATTAA+GGG + chr8_1:546097-546116 Msa1171050:CDS 40.0%
AGTCCCTTAATAAAGCTTCC+CGG - chr8_1:546103-546122 None:intergenic 40.0%
AGGAAGACTTAGCAACTGTT+TGG - chr8_1:546168-546187 None:intergenic 40.0%
GCAAACTTGAAATCCTTTGC+TGG + chr8_1:546191-546210 Msa1171050:CDS 40.0%
ATCCTTTGCTGGGAGTAAAA+AGG + chr8_1:546202-546221 Msa1171050:CDS 40.0%
TCCTTTGCTGGGAGTAAAAA+GGG + chr8_1:546203-546222 Msa1171050:CDS 40.0%
CATTCTCAACTCATGGATAC+TGG + chr8_1:546232-546251 Msa1171050:CDS 40.0%
! GTTTGAAACAGGACTCAATG+GGG + chr8_1:546390-546409 Msa1171050:intron 40.0%
TATGACCATCCATTACTGTC+TGG + chr8_1:546599-546618 Msa1171050:intron 40.0%
GCTGGGAAACTTATGAAAGT+TGG + chr8_1:546830-546849 Msa1171050:intron 40.0%
CGCAAGGAAAAGACATCTAA+TGG + chr8_1:547117-547136 Msa1171050:CDS 40.0%
GTACTATGATACGTACTCAG+AGG - chr8_1:547225-547244 None:intergenic 40.0%
AGGTATCTTAACTCCTGCAA+TGG + chr8_1:547260-547279 Msa1171050:CDS 40.0%
ATGAAAGCTGAATCCATTGC+AGG - chr8_1:547276-547295 None:intergenic 40.0%
!! CTGTTTTTCCTGTTGAACCT+TGG - chr8_1:547383-547402 None:intergenic 40.0%
!! AAAGTACTGTGGTATTGAGC+TGG + chr8_1:547611-547630 Msa1171050:intron 40.0%
! AAGTACTGTGGTATTGAGCT+GGG + chr8_1:547612-547631 Msa1171050:intron 40.0%
TGGACTAAGGTAAGTGAAAC+AGG - chr8_1:547680-547699 None:intergenic 40.0%
GACATCGAAAGTTTGGACTA+AGG - chr8_1:547693-547712 None:intergenic 40.0%
CACCCTCTCACTCAAAAAAA+TGG - chr8_1:547715-547734 None:intergenic 40.0%
!!! TTTTTTTGAGTGAGAGGGTG+TGG + chr8_1:547715-547734 Msa1171050:intron 40.0%
!!! TTTTTTGAGTGAGAGGGTGT+GGG + chr8_1:547716-547735 Msa1171050:intron 40.0%
TACTACATCGACGAGAGATA+CGG + chr8_1:547744-547763 Msa1171050:intron 40.0%
CAAAACCAACTTCCAAGGTA+AGG - chr8_1:547800-547819 None:intergenic 40.0%
!!! TGGTTTTGTGTGGTAGAGTT+TGG + chr8_1:547812-547831 Msa1171050:intron 40.0%
!! TAACTTTTGAGGGAGGTGAT+TGG - chr8_1:547932-547951 None:intergenic 40.0%
!! GTACGAATAACTTTTGAGGG+AGG - chr8_1:547939-547958 None:intergenic 40.0%
!! CTTCCCTGTTTGCTATATGA+AGG - chr8_1:548020-548039 None:intergenic 40.0%
CTTCATATAGCAAACAGGGA+AGG + chr8_1:548018-548037 Msa1171050:intron 40.0%
CCATGCATTATAGTGCATGA+CGG + chr8_1:548200-548219 Msa1171050:intron 40.0%
ATTGTTCCTAACTTCTGCAG+AGG - chr8_1:548319-548338 None:intergenic 40.0%
!! TTGTGGAATGAGGGTATCTT+TGG - chr8_1:548357-548376 None:intergenic 40.0%
AGTAGGAAAAAATGGTCTGG+TGG + chr8_1:548420-548439 Msa1171050:CDS 40.0%
!! CTGACATTCTGGAATTATCG+AGG - chr8_1:548539-548558 None:intergenic 40.0%
GAGATTATCAGCTGACATTC+TGG - chr8_1:548550-548569 None:intergenic 40.0%
!! TTGAATTTCAGAGAGCACTC+AGG + chr8_1:548606-548625 Msa1171050:CDS 40.0%
GCAGTTTATACACCAAAGCT+TGG + chr8_1:548649-548668 Msa1171050:CDS 40.0%
TTGAGATTGCCATCTCTCTA+TGG - chr8_1:548715-548734 None:intergenic 40.0%
ATAAGGCAAGAACACTAGAC+AGG + chr8_1:548964-548983 Msa1171050:CDS 40.0%
TAAGGCAAGAACACTAGACA+GGG + chr8_1:548965-548984 Msa1171050:CDS 40.0%
GTTATGAGGAATAACCGATC+TGG + chr8_1:549108-549127 Msa1171050:intron 40.0%
! TGGGAATAAGTTTCAGGTCA+TGG + chr8_1:549177-549196 Msa1171050:intron 40.0%
CTTTCCATTGTCACTGAGTT+TGG + chr8_1:549349-549368 Msa1171050:intron 40.0%
GTTATTTGCAGCTCTGTTGA+AGG + chr8_1:549461-549480 Msa1171050:three_prime_UTR 40.0%
! CAGCTCTGTTGAAGGATTTT+TGG + chr8_1:549469-549488 Msa1171050:three_prime_UTR 40.0%
TCTTCCAATGTATGCACTAC+AGG + chr8_1:549566-549585 Msa1171050:three_prime_UTR 40.0%
AGGTGAAAAGATGGGACTAA+TGG - chr8_1:549807-549826 None:intergenic 40.0%
ACAGATAGAGGGAATTCGTA+AGG - chr8_1:549923-549942 None:intergenic 40.0%
CAGTAGAGACTGTATTGCAG+CGG - chr8_1:540912-540931 None:intergenic 45.0%
AGCTTCTTCTTAACACAGCG+TGG - chr8_1:541258-541277 None:intergenic 45.0%
!! AAGCTTTGCTTGGTGTCAGA+GGG + chr8_1:541273-541292 Msa1171050:CDS 45.0%
CGTTGATGTAGTAGCACAAG+AGG + chr8_1:541332-541351 Msa1171050:CDS 45.0%
AGTAGCACAAGAGGATTTGG+GGG + chr8_1:541341-541360 Msa1171050:CDS 45.0%
! GAGTCTTCTGATGGGTCTTT+GGG + chr8_1:541471-541490 Msa1171050:CDS 45.0%
! TTTGGCACTGAAGGGAATTG+AGG + chr8_1:541650-541669 Msa1171050:CDS 45.0%
GAGGATCTTGATGTGTCTGA+AGG + chr8_1:541669-541688 Msa1171050:CDS 45.0%
GGATCTTGATGTGTCTGAAG+GGG + chr8_1:541671-541690 Msa1171050:CDS 45.0%
GATCTTGATGTGTCTGAAGG+GGG + chr8_1:541672-541691 Msa1171050:CDS 45.0%
GGAGCCAGAATGTGAATGAT+GGG + chr8_1:541880-541899 Msa1171050:CDS 45.0%
AAGTGCCAGAAAAACTGCTG+AGG + chr8_1:541920-541939 Msa1171050:CDS 45.0%
AGTGCCAGAAAAACTGCTGA+GGG + chr8_1:541921-541940 Msa1171050:CDS 45.0%
! TACACCCTCAGCAGTTTTTC+TGG - chr8_1:541928-541947 None:intergenic 45.0%
! GCTGACGTTGGCTAAAAAAC+AGG - chr8_1:541988-542007 None:intergenic 45.0%
!! TTTTTAGCCAACGTCAGCCA+TGG + chr8_1:541990-542009 Msa1171050:CDS 45.0%
! ACAATTGCTGGCTATCTCCA+TGG - chr8_1:542010-542029 None:intergenic 45.0%
AATGCATCCTTTGGGTCAGA+AGG - chr8_1:542062-542081 None:intergenic 45.0%
TTGAGCTCGCCCTCAATAAT+TGG - chr8_1:542188-542207 None:intergenic 45.0%
AAGTTCTCCCCTTGTGATTC+TGG + chr8_1:542287-542306 Msa1171050:CDS 45.0%
AGTTCTCCCCTTGTGATTCT+GGG + chr8_1:542288-542307 Msa1171050:CDS 45.0%
TTCCAGGGATCCTCAAGAAA+TGG + chr8_1:542374-542393 Msa1171050:CDS 45.0%
TGCCATAGCTCCATTTCTTG+AGG - chr8_1:542387-542406 None:intergenic 45.0%
AATGGAGCTATGGCATTCTC+TGG + chr8_1:542392-542411 Msa1171050:CDS 45.0%
ACTGTTTCATCGGACACTGT+AGG - chr8_1:542581-542600 None:intergenic 45.0%
! TGGAATTGAACTCTGAGGAG+AGG - chr8_1:542801-542820 None:intergenic 45.0%
! ATATGCTGCTTCTGTGTCTG+AGG + chr8_1:542844-542863 Msa1171050:CDS 45.0%
AAGGGGACATGGCATATGAA+GGG + chr8_1:542927-542946 Msa1171050:CDS 45.0%
GAGCGCATTCTTAAACCAAG+AGG + chr8_1:543016-543035 Msa1171050:CDS 45.0%
GAAGAATCAAGCTTCCCTCT+TGG - chr8_1:543034-543053 None:intergenic 45.0%
ATGCAGTAGCAGTATCAGCT+GGG + chr8_1:543083-543102 Msa1171050:CDS 45.0%
TTCAACTGGACCAGCTTCAT+GGG - chr8_1:543116-543135 None:intergenic 45.0%
TTTCAACTGGACCAGCTTCA+TGG - chr8_1:543117-543136 None:intergenic 45.0%
CAGGAGATCTTAAAGCGGAA+AGG + chr8_1:543148-543167 Msa1171050:CDS 45.0%
GGAGATCTTAAAGCGGAAAG+GGG + chr8_1:543150-543169 Msa1171050:CDS 45.0%
GAGATCTTAAAGCGGAAAGG+GGG + chr8_1:543151-543170 Msa1171050:CDS 45.0%
! GAAATCAGATCCTAGCTCTC+TGG + chr8_1:543780-543799 Msa1171050:intron 45.0%
! AATCAGATCCTAGCTCTCTG+GGG + chr8_1:543782-543801 Msa1171050:CDS 45.0%
! ATATTGCCTCTTGCTGACTG+TGG + chr8_1:543821-543840 Msa1171050:CDS 45.0%
! TATTGCCTCTTGCTGACTGT+GGG + chr8_1:543822-543841 Msa1171050:CDS 45.0%
CTAATAAGAGAAGAGCGAGG+AGG - chr8_1:543875-543894 None:intergenic 45.0%
CTCCTCGCTCTTCTCTTATT+AGG + chr8_1:543873-543892 Msa1171050:CDS 45.0%
TCCCTAATAAGAGAAGAGCG+AGG - chr8_1:543878-543897 None:intergenic 45.0%
TCGCTCTTCTCTTATTAGGG+AGG + chr8_1:543877-543896 Msa1171050:CDS 45.0%
GAAAAAGCTGGGATTCAGGA+TGG + chr8_1:544403-544422 Msa1171050:CDS 45.0%
!! GGGATTCAGGATGGATTAAG+TGG + chr8_1:544412-544431 Msa1171050:CDS 45.0%
ACCTGTCTTAAATCTGCCTC+AGG + chr8_1:544469-544488 Msa1171050:CDS 45.0%
! ACCTGAGGCAGATTTAAGAC+AGG - chr8_1:544473-544492 None:intergenic 45.0%
ATCACCTATCAGATCACCTG+AGG - chr8_1:544488-544507 None:intergenic 45.0%
AGAGTGATTGTCATTGGAGC+CGG + chr8_1:544538-544557 Msa1171050:CDS 45.0%
TAAATCCCAGACGTTGCAAG+TGG - chr8_1:544588-544607 None:intergenic 45.0%
CTGTAACTGTACTAGAGGCA+AGG + chr8_1:544608-544627 Msa1171050:CDS 45.0%
TAGAGGCAAGGAGTAGGATA+GGG + chr8_1:544620-544639 Msa1171050:CDS 45.0%
TACTAGCACCAAGATCCACA+GGG - chr8_1:544681-544700 None:intergenic 45.0%
ATACTAGCACCAAGATCCAC+AGG - chr8_1:544682-544701 None:intergenic 45.0%
! GTATTGCTTGTTGCCCAGAA+GGG + chr8_1:544898-544917 Msa1171050:CDS 45.0%
ATGCGAATGTCCCTTGAAGA+TGG + chr8_1:544931-544950 Msa1171050:CDS 45.0%
!! TTCTTCGAGAGCGTTCCAAA+CGG - chr8_1:544981-545000 None:intergenic 45.0%
GAACGCTCTCGAAGAAGTAA+CGG + chr8_1:544985-545004 Msa1171050:CDS 45.0%
GATGTGTATGGAGGATATGG+AGG + chr8_1:545144-545163 Msa1171050:CDS 45.0%
AAACGTGTCTTATGACGGCA+AGG + chr8_1:545254-545273 Msa1171050:CDS 45.0%
! GTTCTTTGGAGATGCTGTTC+TGG + chr8_1:545326-545345 Msa1171050:CDS 45.0%
GCATCATCCCAAAACACACT+AGG - chr8_1:545477-545496 None:intergenic 45.0%
!!! TGTGTTTTGGGATGATGCTG+TGG + chr8_1:545479-545498 Msa1171050:CDS 45.0%
! GATGATGCTGTGGACTACTT+CGG + chr8_1:545489-545508 Msa1171050:CDS 45.0%
!! TCTTCGGAAACTTTTTGGGG+AGG + chr8_1:545674-545693 Msa1171050:CDS 45.0%
CGATGCTCCAATAGCAACAT+AGG - chr8_1:545772-545791 None:intergenic 45.0%
!! AAAGAGCACCCTGATACAGT+TGG + chr8_1:545861-545880 Msa1171050:CDS 45.0%
TTGCACCACCAACTGTATCA+GGG - chr8_1:545872-545891 None:intergenic 45.0%
ATTGCACCACCAACTGTATC+AGG - chr8_1:545873-545892 None:intergenic 45.0%
CCTTTGCTGGGAGTAAAAAG+GGG + chr8_1:546204-546223 Msa1171050:CDS 45.0%
GGCTAAGCATTCTCAACTCA+TGG + chr8_1:546225-546244 Msa1171050:CDS 45.0%
TACTGGTACTGCTGTCTCAT+TGG + chr8_1:546249-546268 Msa1171050:intron 45.0%
CACACAATGTCGCAAGAGTT+GGG - chr8_1:546426-546445 None:intergenic 45.0%
! GATCACCAGACAGTAATGGA+TGG - chr8_1:546607-546626 None:intergenic 45.0%
TGCTGATCACCAGACAGTAA+TGG - chr8_1:546611-546630 None:intergenic 45.0%
TCTGAGGGGTCATATGTGTT+AGG + chr8_1:546690-546709 Msa1171050:intron 45.0%
ATAAGCTCTGTAAGCTCTGC+TGG + chr8_1:546812-546831 Msa1171050:intron 45.0%
TAAGCTCTGTAAGCTCTGCT+GGG + chr8_1:546813-546832 Msa1171050:intron 45.0%
GCGTTTGGAAGAGCTCATTT+GGG - chr8_1:546935-546954 None:intergenic 45.0%
CCAAAACAGTGGAGAAACTG+TGG - chr8_1:546974-546993 None:intergenic 45.0%
! CCACAGTTTCTCCACTGTTT+TGG + chr8_1:546971-546990 Msa1171050:intron 45.0%
!! AGGCATTGGGAAAACAGTGA+AGG + chr8_1:547017-547036 Msa1171050:intron 45.0%
CAAGCCAGTTGGTTAGTGTA+TGG + chr8_1:547082-547101 Msa1171050:CDS 45.0%
CAAGCCATACACTAACCAAC+TGG - chr8_1:547089-547108 None:intergenic 45.0%
ATGGCTTGAAGTCTTTCGCA+AGG + chr8_1:547101-547120 Msa1171050:CDS 45.0%
CTATGATACGTACTCAGAGG+TGG - chr8_1:547222-547241 None:intergenic 45.0%
!! CTGACTTCCTTGTTTGCTGT+GGG - chr8_1:547316-547335 None:intergenic 45.0%
CAAACAAGGAAGTCAGCAAG+CGG + chr8_1:547320-547339 Msa1171050:CDS 45.0%
AGCAAGCGGCAAATGACTTA+TGG + chr8_1:547334-547353 Msa1171050:CDS 45.0%
GTCAGTTCTTCTAGATCCCA+AGG + chr8_1:547363-547382 Msa1171050:CDS 45.0%
TCTAGATCCCAAGGTTCAAC+AGG + chr8_1:547372-547391 Msa1171050:CDS 45.0%
TTCTTCCTCAGACAGACAGT+GGG - chr8_1:547424-547443 None:intergenic 45.0%
TTTCTTCCTCAGACAGACAG+TGG - chr8_1:547425-547444 None:intergenic 45.0%
CTGTCTGTCTGAGGAAGAAA+AGG + chr8_1:547425-547444 Msa1171050:CDS 45.0%
!! AAAAGCACTTGTTGCTGCTG+AGG + chr8_1:547479-547498 Msa1171050:CDS 45.0%
!! AGGCATGTGCTAAAGTACTG+TGG + chr8_1:547600-547619 Msa1171050:intron 45.0%
!!! TTTTTGAGTGAGAGGGTGTG+GGG + chr8_1:547717-547736 Msa1171050:intron 45.0%
GTAGTCCTTACCTTGGAAGT+TGG + chr8_1:547792-547811 Msa1171050:intron 45.0%
CCACACAAAACCAACTTCCA+AGG - chr8_1:547805-547824 None:intergenic 45.0%
!!! CCTTGGAAGTTGGTTTTGTG+TGG + chr8_1:547802-547821 Msa1171050:intron 45.0%
!! TTCTAAGATCAGGTGGAGCT+AGG + chr8_1:547868-547887 Msa1171050:intron 45.0%
CATATAGCAAACAGGGAAGG+TGG + chr8_1:548021-548040 Msa1171050:intron 45.0%
CCGTCATGCACTATAATGCA+TGG - chr8_1:548203-548222 None:intergenic 45.0%
CATACACCTCTGCAGAAGTT+AGG + chr8_1:548310-548329 Msa1171050:CDS 45.0%
!! ATGAGGGTATCTTTGGAAGC+TGG - chr8_1:548350-548369 None:intergenic 45.0%
GTTCCCGCCTCTTAAATTTG+TGG - chr8_1:548374-548393 None:intergenic 45.0%
! AAAATGGTCTGGTGGTGTCT+TGG + chr8_1:548428-548447 Msa1171050:CDS 45.0%
! AAATGGTCTGGTGGTGTCTT+GGG + chr8_1:548429-548448 Msa1171050:CDS 45.0%
GAAATTGCAGAGTTAGGGAC+TGG + chr8_1:548484-548503 Msa1171050:CDS 45.0%
AGCTGAGTCAATCCAAGCTT+TGG - chr8_1:548664-548683 None:intergenic 45.0%
! ATTGACTCAGCTGATGGTGA+GGG + chr8_1:548672-548691 Msa1171050:CDS 45.0%
ACTATCAGGCCATAGAGAGA+TGG + chr8_1:548703-548722 Msa1171050:CDS 45.0%
AGGGTTCAAATGCCTGTTCA+AGG + chr8_1:548790-548809 Msa1171050:CDS 45.0%
! TGTCATTTGCCACTCCATCA+TGG - chr8_1:548830-548849 None:intergenic 45.0%
ACTAGACAGGGATGCATACA+AGG + chr8_1:548977-548996 Msa1171050:CDS 45.0%
! CAAGGCTTTATCTGCATCTG+TGG - chr8_1:549209-549228 None:intergenic 45.0%
CAACCCAAACTCAGTGACAA+TGG - chr8_1:549356-549375 None:intergenic 45.0%
CATTGTCACTGAGTTTGGGT+TGG + chr8_1:549354-549373 Msa1171050:intron 45.0%
! CATGCAGATTCGACCTTTTG+TGG + chr8_1:549387-549406 Msa1171050:intron 45.0%
TCCAATGTATGCACTACAGG+AGG + chr8_1:549569-549588 Msa1171050:three_prime_UTR 45.0%
ACCTCCTGTAGTGCATACAT+TGG - chr8_1:549573-549592 None:intergenic 45.0%
! TACCAGAGTACTCTGCAAAC+CGG + chr8_1:549691-549710 Msa1171050:three_prime_UTR 45.0%
AGTTGAATCCTTTGGATGCC+AGG + chr8_1:549751-549770 Msa1171050:three_prime_UTR 45.0%
TCTTCAAACTTCCAGAAGCC+TGG - chr8_1:549772-549791 None:intergenic 45.0%
TCCCTCTATCTGTACAGCTT+AGG + chr8_1:549930-549949 Msa1171050:three_prime_UTR 45.0%
CCCTAAGCTGTACAGATAGA+GGG - chr8_1:549934-549953 None:intergenic 45.0%
CCCTCTATCTGTACAGCTTA+GGG + chr8_1:549931-549950 Msa1171050:three_prime_UTR 45.0%
ACCCTAAGCTGTACAGATAG+AGG - chr8_1:549935-549954 None:intergenic 45.0%
TCTAACAGGCCACAGTGAAA+TGG - chr8_1:549985-550004 None:intergenic 45.0%
GAAGCTTGAGTCTCTTCCTC+CGG - chr8_1:540860-540879 None:intergenic 50.0%
GCGGTGAGTAGGTAGAAAGA+AGG - chr8_1:540893-540912 None:intergenic 50.0%
ACTGTATTGCAGCGGTGAGT+AGG - chr8_1:540904-540923 None:intergenic 50.0%
!! GAAGCTTTGCTTGGTGTCAG+AGG + chr8_1:541272-541291 Msa1171050:CDS 50.0%
!! AGCTTTGCTTGGTGTCAGAG+GGG + chr8_1:541274-541293 Msa1171050:CDS 50.0%
!! GGAATGCTGTTGACTCCGTT+GGG + chr8_1:541304-541323 Msa1171050:CDS 50.0%
GTAGCACAAGAGGATTTGGG+GGG + chr8_1:541342-541361 Msa1171050:CDS 50.0%
ACAAGAGGATTTGGGGGGTA+TGG + chr8_1:541347-541366 Msa1171050:CDS 50.0%
TGAAGGGTCCGAAGAGAGAT+CGG + chr8_1:541400-541419 Msa1171050:CDS 50.0%
CTAGAACCCCGATCTCTCTT+CGG - chr8_1:541411-541430 None:intergenic 50.0%
! AAGAGAGATCGGGGTTCTAG+AGG + chr8_1:541411-541430 Msa1171050:CDS 50.0%
TTGCGGTGGAGTCTTCTGAT+GGG + chr8_1:541463-541482 Msa1171050:CDS 50.0%
! GGAGTCTTCTGATGGGTCTT+TGG + chr8_1:541470-541489 Msa1171050:CDS 50.0%
GACAGTGCTTATGAAGGGCA+GGG + chr8_1:541543-541562 Msa1171050:CDS 50.0%
GAATGTAGAGGGGCCTAATG+TGG + chr8_1:541626-541645 Msa1171050:CDS 50.0%
AGAGGGGCCTAATGTGGATT+TGG + chr8_1:541632-541651 Msa1171050:CDS 50.0%
TGATGTGTCTGAAGGGGGTT+TGG + chr8_1:541677-541696 Msa1171050:CDS 50.0%
GGGAGCCAGAATGTGAATGA+TGG + chr8_1:541879-541898 Msa1171050:CDS 50.0%
TTGTCCTCCTTCTGACCCAA+AGG + chr8_1:542052-542071 Msa1171050:CDS 50.0%
ACCGTCTCTCTCCCGAAATT+GGG + chr8_1:542155-542174 Msa1171050:CDS 50.0%
ATTGGAGACGCCCCCAATTT+CGG - chr8_1:542170-542189 None:intergenic 50.0%
! GGGGCGTCTCCAATTATTGA+GGG + chr8_1:542176-542195 Msa1171050:CDS 50.0%
CTCCATTTCTTGAGGATCCC+TGG - chr8_1:542379-542398 None:intergenic 50.0%
!! AAGGGTAAAAAGCGTCGGCA+AGG + chr8_1:542908-542927 Msa1171050:CDS 50.0%
!! AGGGTAAAAAGCGTCGGCAA+GGG + chr8_1:542909-542928 Msa1171050:CDS 50.0%
CAAGGGGACATGGCATATGA+AGG + chr8_1:542926-542945 Msa1171050:CDS 50.0%
AGGGGACATGGCATATGAAG+GGG + chr8_1:542928-542947 Msa1171050:CDS 50.0%
! TGAAGGGGATGTTGATTGGG+AGG + chr8_1:542943-542962 Msa1171050:CDS 50.0%
GCTCACCGTCAACAACACTT+TGG - chr8_1:543000-543019 None:intergenic 50.0%
GATGCAGTAGCAGTATCAGC+TGG + chr8_1:543082-543101 Msa1171050:CDS 50.0%
AATCCTTCTCCCACGAAGTG+GGG - chr8_1:543692-543711 None:intergenic 50.0%
CAATCCTTCTCCCACGAAGT+GGG - chr8_1:543693-543712 None:intergenic 50.0%
! ATTGCCTCTTGCTGACTGTG+GGG + chr8_1:543823-543842 Msa1171050:CDS 50.0%
GGTTCGTGATACTCCTTCTG+AGG + chr8_1:543844-543863 Msa1171050:CDS 50.0%
CGAGGAAAAAGCTGGGATTC+AGG + chr8_1:544399-544418 Msa1171050:CDS 50.0%
TCTGCCTCAGGTGATCTGAT+AGG + chr8_1:544481-544500 Msa1171050:CDS 50.0%
CTGTACTAGAGGCAAGGAGT+AGG + chr8_1:544614-544633 Msa1171050:CDS 50.0%
CTAGAGGCAAGGAGTAGGAT+AGG + chr8_1:544619-544638 Msa1171050:CDS 50.0%
AGAGGCAAGGAGTAGGATAG+GGG + chr8_1:544621-544640 Msa1171050:CDS 50.0%
CTCATCTCTTTCTGTCCCTG+TGG + chr8_1:544663-544682 Msa1171050:CDS 50.0%
CTTTCTGTCCCTGTGGATCT+TGG + chr8_1:544670-544689 Msa1171050:CDS 50.0%
CAACTGAGCACAAACCAACG+CGG - chr8_1:544755-544774 None:intergenic 50.0%
!! GCGTTGGTTTGTGCTCAGTT+GGG + chr8_1:544754-544773 Msa1171050:CDS 50.0%
! GGTATTGCTTGTTGCCCAGA+AGG + chr8_1:544897-544916 Msa1171050:CDS 50.0%
TTCCAAACGGCGCCTCTTAA+GGG - chr8_1:544968-544987 None:intergenic 50.0%
AGGAGGTTTCTCTTCCCTAC+TGG + chr8_1:545112-545131 Msa1171050:CDS 50.0%
TGTTCCATTGGGCTGCTTGA+AGG + chr8_1:545353-545372 Msa1171050:CDS 50.0%
GAATATTTCCACGGGGGCAA+AGG - chr8_1:545402-545421 None:intergenic 50.0%
ATGTTGTGACTGATTGGGGG+AGG + chr8_1:545721-545740 Msa1171050:CDS 50.0%
TGTTGTGACTGATTGGGGGA+GGG + chr8_1:545722-545741 Msa1171050:CDS 50.0%
!! GGGAGGGATCCTTTTAGCTA+TGG + chr8_1:545738-545757 Msa1171050:CDS 50.0%
! TGTATCAGGGTGCTCTTTGC+AGG - chr8_1:545859-545878 None:intergenic 50.0%
!! GTTGGTGGTGCAATGATGAG+TGG + chr8_1:545879-545898 Msa1171050:CDS 50.0%
! AATGATGAGTGGACTCCGAG+AGG + chr8_1:545890-545909 Msa1171050:CDS 50.0%
CAATTATGCGCACAGCCTCT+CGG - chr8_1:545908-545927 None:intergenic 50.0%
TGATTATACGGCAGAGGTGG+AGG + chr8_1:545947-545966 Msa1171050:CDS 50.0%
ACGGTGCTCGAATCTTAAGC+CGG + chr8_1:546081-546100 Msa1171050:CDS 50.0%
! CCCCTTTTTACTCCCAGCAA+AGG - chr8_1:546207-546226 None:intergenic 50.0%
GAAACAGGACTCAATGGGGA+AGG + chr8_1:546394-546413 Msa1171050:intron 50.0%
GCACACAATGTCGCAAGAGT+TGG - chr8_1:546427-546446 None:intergenic 50.0%
!! TTGCTTGCTGTGCGCTTATC+AGG + chr8_1:546473-546492 Msa1171050:CDS 50.0%
GGCGTTTGGAAGAGCTCATT+TGG - chr8_1:546936-546955 None:intergenic 50.0%
TCGTGCTATAGCAAGCCAGT+TGG + chr8_1:547071-547090 Msa1171050:CDS 50.0%
! AGAGGTGGTTTTCCTGATGC+TGG - chr8_1:547207-547226 None:intergenic 50.0%
! GCTGACTTCCTTGTTTGCTG+TGG - chr8_1:547317-547336 None:intergenic 50.0%
GACTTGGGTAGTCCTTACCT+TGG + chr8_1:547785-547804 Msa1171050:intron 50.0%
TTTGAGGGAGGTGATTGGTG+AGG - chr8_1:547927-547946 None:intergenic 50.0%
CAAACAGGGAAGGTGGAGAA+TGG + chr8_1:548028-548047 Msa1171050:intron 50.0%
AGGGAAGGTGGAGAATGGAT+AGG + chr8_1:548033-548052 Msa1171050:intron 50.0%
CAGCTGATAATCTCTCGCAG+CGG + chr8_1:548556-548575 Msa1171050:CDS 50.0%
!! CTCAGGAGAAAGTGTTGCTG+TGG + chr8_1:548623-548642 Msa1171050:CDS 50.0%
! GCTTGGATTGACTCAGCTGA+TGG + chr8_1:548666-548685 Msa1171050:CDS 50.0%
! GATTGACTCAGCTGATGGTG+AGG + chr8_1:548671-548690 Msa1171050:CDS 50.0%
TTGCCACTCCATCATGGTTC+CGG - chr8_1:548824-548843 None:intergenic 50.0%
CTTATGTGAGAGCAAGCACG+TGG - chr8_1:549538-549557 None:intergenic 50.0%
TGAGTCTCTTCCTCCGGAGA+CGG - chr8_1:540854-540873 None:intergenic 55.0%
!! TTGGTGTCAGAGGGGACTGA+TGG + chr8_1:541282-541301 Msa1171050:CDS 55.0%
! TGGTGTCAGAGGGGACTGAT+GGG + chr8_1:541283-541302 Msa1171050:CDS 55.0%
!! GGGAATGCTGTTGACTCCGT+TGG + chr8_1:541303-541322 Msa1171050:CDS 55.0%
GAAGGGTCCGAAGAGAGATC+GGG + chr8_1:541401-541420 Msa1171050:CDS 55.0%
AAGGGTCCGAAGAGAGATCG+GGG + chr8_1:541402-541421 Msa1171050:CDS 55.0%
GTTGCGGTGGAGTCTTCTGA+TGG + chr8_1:541462-541481 Msa1171050:CDS 55.0%
GGACAGTGCTTATGAAGGGC+AGG + chr8_1:541542-541561 Msa1171050:CDS 55.0%
GCTATCTCCATGGCTGACGT+TGG - chr8_1:542000-542019 None:intergenic 55.0%
GCATCCTTTGGGTCAGAAGG+AGG - chr8_1:542059-542078 None:intergenic 55.0%
CACCGTCTCTCTCCCGAAAT+TGG + chr8_1:542154-542173 Msa1171050:CDS 55.0%
CCCCAATTTCGGGAGAGAGA+CGG - chr8_1:542159-542178 None:intergenic 55.0%
CCGTCTCTCTCCCGAAATTG+GGG + chr8_1:542156-542175 Msa1171050:CDS 55.0%
CGTCTCTCTCCCGAAATTGG+GGG + chr8_1:542157-542176 Msa1171050:CDS 55.0%
TTGGAGACGCCCCCAATTTC+GGG - chr8_1:542169-542188 None:intergenic 55.0%
!! GGGGGCGTCTCCAATTATTG+AGG + chr8_1:542175-542194 Msa1171050:CDS 55.0%
TCAGGGGCCCAGAATCACAA+GGG - chr8_1:542298-542317 None:intergenic 55.0%
ATCAGCTGTTATGCGCCGCA+AGG + chr8_1:542889-542908 Msa1171050:CDS 55.0%
TCAGCTGTTATGCGCCGCAA+GGG + chr8_1:542890-542909 Msa1171050:CDS 55.0%
! GCCGCAAGGGTAAAAAGCGT+CGG + chr8_1:542903-542922 Msa1171050:CDS 55.0%
!! GCCGACGCTTTTTACCCTTG+CGG - chr8_1:542907-542926 None:intergenic 55.0%
!! GGGTAAAAAGCGTCGGCAAG+GGG + chr8_1:542910-542929 Msa1171050:CDS 55.0%
!! ACGAAGTGGGGTTGGCTACA+TGG - chr8_1:543680-543699 None:intergenic 55.0%
ATGTAGCCAACCCCACTTCG+TGG + chr8_1:543679-543698 Msa1171050:intron 55.0%
TGTAGCCAACCCCACTTCGT+GGG + chr8_1:543680-543699 Msa1171050:intron 55.0%
CCAATCCTTCTCCCACGAAG+TGG - chr8_1:543694-543713 None:intergenic 55.0%
CCACTTCGTGGGAGAAGGAT+TGG + chr8_1:543691-543710 Msa1171050:intron 55.0%
CGAGGAGGTTCATCCTCAGA+AGG - chr8_1:543860-543879 None:intergenic 55.0%
AGCAGTTAGACCAGCAGGAC+CGG - chr8_1:544560-544579 None:intergenic 55.0%
GAGGCAAGGAGTAGGATAGG+GGG + chr8_1:544622-544641 Msa1171050:CDS 55.0%
AGCCACATCAGCCTCAACAC+CGG - chr8_1:544710-544729 None:intergenic 55.0%
AAGACCAGATCCTTCCGCGT+TGG + chr8_1:544738-544757 Msa1171050:CDS 55.0%
CAAACCAACGCGGAAGGATC+TGG - chr8_1:544745-544764 None:intergenic 55.0%
TGAGCACAAACCAACGCGGA+AGG - chr8_1:544751-544770 None:intergenic 55.0%
!! CGCGTTGGTTTGTGCTCAGT+TGG + chr8_1:544753-544772 Msa1171050:CDS 55.0%
CATAGCCTGGTCACCCTTCT+GGG - chr8_1:544914-544933 None:intergenic 55.0%
CAAGGGACATTCGCATAGCC+TGG - chr8_1:544927-544946 None:intergenic 55.0%
GTTCCAAACGGCGCCTCTTA+AGG - chr8_1:544969-544988 None:intergenic 55.0%
! TGGGTGTGCTGCTCTGCTTA+AGG + chr8_1:545092-545111 Msa1171050:CDS 55.0%
! GTGTGCTGCTCTGCTTAAGG+AGG + chr8_1:545095-545114 Msa1171050:CDS 55.0%
TGACGGCAAGGAATCAAGCC+TGG + chr8_1:545266-545285 Msa1171050:CDS 55.0%
GACGGCAAGGAATCAAGCCT+GGG + chr8_1:545267-545286 Msa1171050:CDS 55.0%
TCAGCCTTCAAGCAGCCCAA+TGG - chr8_1:545360-545379 None:intergenic 55.0%
TATTTCCACGGGGGCAAAGG+TGG - chr8_1:545399-545418 None:intergenic 55.0%
CTACTTCGGAGCAACAGCTG+AGG + chr8_1:545503-545522 Msa1171050:CDS 55.0%
CAAGAAAACAGTGGGGGCTC+CGG + chr8_1:545566-545585 Msa1171050:CDS 55.0%
GTTGGGAAAGCGGCCATAGA+TGG + chr8_1:545606-545625 Msa1171050:CDS 55.0%
GAGCACCCTGATACAGTTGG+TGG + chr8_1:545864-545883 Msa1171050:CDS 55.0%
CGGTGCTCGAATCTTAAGCC+GGG + chr8_1:546082-546101 Msa1171050:CDS 55.0%
CAGGACTCAATGGGGAAGGA+TGG + chr8_1:546398-546417 Msa1171050:intron 55.0%
GGATACCCACTGTCTGTCTG+AGG + chr8_1:547416-547435 Msa1171050:CDS 55.0%
ATCAGGTGGAGCTAGGTGTG+TGG + chr8_1:547875-547894 Msa1171050:intron 55.0%
TCAGGTGGAGCTAGGTGTGT+GGG + chr8_1:547876-547895 Msa1171050:intron 55.0%
AGGGAGGTGATTGGTGAGGA+GGG - chr8_1:547923-547942 None:intergenic 55.0%
CAATCTCAAGCAGCTGCAGC+AGG + chr8_1:548726-548745 Msa1171050:CDS 55.0%
CCTGTTCAAGGTTACCCAGC+CGG + chr8_1:548802-548821 Msa1171050:CDS 55.0%
TTACCCAGCCGGAACCATGA+TGG + chr8_1:548813-548832 Msa1171050:CDS 55.0%
ACTCCATCATGGTTCCGGCT+GGG - chr8_1:548819-548838 None:intergenic 55.0%
TCTTACGGTCTCCGCACTCA+CGG + chr8_1:549503-549522 Msa1171050:three_prime_UTR 55.0%
!! AGCCGGTTTGCAGAGTACTC+TGG - chr8_1:549696-549715 None:intergenic 55.0%
TCCTTTGGATGCCAGGCTTC+TGG + chr8_1:549758-549777 Msa1171050:three_prime_UTR 55.0%
TCCAGAAGCCTGGCATCCAA+AGG - chr8_1:549762-549781 None:intergenic 55.0%
GCTTATGAAGGGCAGGGTGC+TGG + chr8_1:541549-541568 Msa1171050:CDS 60.0%
!! GGGCAGGGTGCTGGAGAAAA+TGG + chr8_1:541558-541577 Msa1171050:CDS 60.0%
! TGAAGGGGGTTTGGTCGCAG+AGG + chr8_1:541686-541705 Msa1171050:CDS 60.0%
! GAAGGGGGTTTGGTCGCAGA+GGG + chr8_1:541687-541706 Msa1171050:CDS 60.0%
CAGGGGCCCAGAATCACAAG+GGG - chr8_1:542297-542316 None:intergenic 60.0%
GTCAGGGGCCCAGAATCACA+AGG - chr8_1:542299-542318 None:intergenic 60.0%
!! AAAGCGTCGGCAAGGGGACA+TGG + chr8_1:542916-542935 Msa1171050:CDS 60.0%
GGGCTGAAAGCCCATGAAGC+TGG + chr8_1:543103-543122 Msa1171050:CDS 60.0%
AAAGCGGAAAGGGGGTCTCC+AGG + chr8_1:543159-543178 Msa1171050:CDS 60.0%
CTTCTCCCACGAAGTGGGGT+TGG - chr8_1:543688-543707 None:intergenic 60.0%
CAACCCCACTTCGTGGGAGA+AGG + chr8_1:543686-543705 Msa1171050:intron 60.0%
TATCGCAGCCCCAGAGAGCT+AGG - chr8_1:543793-543812 None:intergenic 60.0%
CGAACCCCACAGTCAGCAAG+AGG - chr8_1:543830-543849 None:intergenic 60.0%
CGAGCAGCAGTTAGACCAGC+AGG - chr8_1:544565-544584 None:intergenic 60.0%
TGCTCGCCACTTGCAACGTC+TGG + chr8_1:544579-544598 Msa1171050:CDS 60.0%
GCTCGCCACTTGCAACGTCT+GGG + chr8_1:544580-544599 Msa1171050:CDS 60.0%
! CACCGGTGTTGAGGCTGATG+TGG + chr8_1:544705-544724 Msa1171050:CDS 60.0%
TGTTGCCCAGAAGGGTGACC+AGG + chr8_1:544906-544925 Msa1171050:CDS 60.0%
GCATAGCCTGGTCACCCTTC+TGG - chr8_1:544915-544934 None:intergenic 60.0%
!! TGCCCTTAAGAGGCGCCGTT+TGG + chr8_1:544963-544982 Msa1171050:CDS 60.0%
CACATGCAAGCGCCCAGCAT+TGG - chr8_1:546144-546163 None:intergenic 60.0%
CAATGCTGGGCGCTTGCATG+TGG + chr8_1:546142-546161 Msa1171050:CDS 60.0%
CAGGTGGAGCTAGGTGTGTG+GGG + chr8_1:547877-547896 Msa1171050:intron 60.0%
GAGGGAGGTGATTGGTGAGG+AGG - chr8_1:547924-547943 None:intergenic 60.0%
! GGTCTGGTGGTGTCTTGGGA+AGG + chr8_1:548433-548452 Msa1171050:CDS 60.0%
CCGGCTGGGTAACCTTGAAC+AGG - chr8_1:548805-548824 None:intergenic 60.0%
CACTCCATCATGGTTCCGGC+TGG - chr8_1:548820-548839 None:intergenic 60.0%
! CAGCCGGAACCATGATGGAG+TGG + chr8_1:548818-548837 Msa1171050:CDS 60.0%
! GGTCTCCGCACTCACGGTTT+TGG + chr8_1:549509-549528 Msa1171050:three_prime_UTR 60.0%
!! CTCCGCACTCACGGTTTTGG+TGG + chr8_1:549512-549531 Msa1171050:three_prime_UTR 60.0%
GGCCACCAAAACCGTGAGTG+CGG - chr8_1:549517-549536 None:intergenic 60.0%
GTCTCTTCCTCCGGAGACGG+TGG - chr8_1:540851-540870 None:intergenic 65.0%
GTCATTGGAGCCGGTCCTGC+TGG + chr8_1:544547-544566 Msa1171050:CDS 65.0%
TCTCTCCACCTTTGCCCCCG+TGG + chr8_1:545391-545410 Msa1171050:CDS 65.0%
TACGGCAGAGGTGGAGGCAG+TGG + chr8_1:545953-545972 Msa1171050:CDS 65.0%
TCCTCCGGAGACGGTGGCGA+CGG - chr8_1:540845-540864 None:intergenic 70.0%
GGCAGAGGTGGAGGCAGTGG+AGG + chr8_1:545956-545975 Msa1171050:CDS 70.0%
ACCGTCGCCACCGTCTCCGG+AGG + chr8_1:540841-540860 Msa1171050:five_prime_UTR 75.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 540841 550065 540841 ID=Msa1171050;Name=Msa1171050
chr8_1 mRNA 540841 550065 540841 ID=Msa1171050-mRNA-1;Parent=Msa1171050;Name=Msa1171050-mRNA-1;_AED=0.04;_eAED=0.04;_QI=306|1|1|1|0.85|0.75|8|606|1930
chr8_1 exon 540841 543197 540841 ID=Msa1171050-mRNA-1:exon:126;Parent=Msa1171050-mRNA-1
chr8_1 exon 543781 543922 543781 ID=Msa1171050-mRNA-1:exon:127;Parent=Msa1171050-mRNA-1
chr8_1 exon 544088 546253 544088 ID=Msa1171050-mRNA-1:exon:128;Parent=Msa1171050-mRNA-1
chr8_1 exon 546401 546494 546401 ID=Msa1171050-mRNA-1:exon:129;Parent=Msa1171050-mRNA-1
chr8_1 exon 547019 547500 547019 ID=Msa1171050-mRNA-1:exon:130;Parent=Msa1171050-mRNA-1
chr8_1 exon 548309 549025 548309 ID=Msa1171050-mRNA-1:exon:131;Parent=Msa1171050-mRNA-1
chr8_1 exon 549193 549267 549193 ID=Msa1171050-mRNA-1:exon:132;Parent=Msa1171050-mRNA-1
chr8_1 exon 549394 550065 549394 ID=Msa1171050-mRNA-1:exon:133;Parent=Msa1171050-mRNA-1
chr8_1 five_prime_UTR 540841 541146 540841 ID=Msa1171050-mRNA-1:five_prime_utr;Parent=Msa1171050-mRNA-1
chr8_1 CDS 541147 543197 541147 ID=Msa1171050-mRNA-1:cds;Parent=Msa1171050-mRNA-1
chr8_1 CDS 543781 543922 543781 ID=Msa1171050-mRNA-1:cds;Parent=Msa1171050-mRNA-1
chr8_1 CDS 544088 546253 544088 ID=Msa1171050-mRNA-1:cds;Parent=Msa1171050-mRNA-1
chr8_1 CDS 546401 546494 546401 ID=Msa1171050-mRNA-1:cds;Parent=Msa1171050-mRNA-1
chr8_1 CDS 547019 547500 547019 ID=Msa1171050-mRNA-1:cds;Parent=Msa1171050-mRNA-1
chr8_1 CDS 548309 549025 548309 ID=Msa1171050-mRNA-1:cds;Parent=Msa1171050-mRNA-1
chr8_1 CDS 549193 549267 549193 ID=Msa1171050-mRNA-1:cds;Parent=Msa1171050-mRNA-1
chr8_1 CDS 549394 549459 549394 ID=Msa1171050-mRNA-1:cds;Parent=Msa1171050-mRNA-1
chr8_1 three_prime_UTR 549460 550065 549460 ID=Msa1171050-mRNA-1:three_prime_utr;Parent=Msa1171050-mRNA-1
Gene Sequence

>Msa1171050

ATGGATAATAATGAAGATATGGTTTCTGGAAATGATGATAAGAGGATTAAACTGGTAGAAAATGGTTTGGATTGTGATGATAATGAACCTATATTTAAACTAAGGAAGCCACGCTGTGTTAAGAAGAAGCTTTGCTTGGTGTCAGAGGGGACTGATGGGAATGCTGTTGACTCCGTTGGGAAATTCGTTGATGTAGTAGCACAAGAGGATTTGGGGGGTATGGATGATACGCTAGCTTGTTTTAGGAAGAGATTGAAGGGTCCGAAGAGAGATCGGGGTTCTAGAGGTGCTAATGAGAAAGATTCTAATGTGAATGTTGCGGTGGAGTCTTCTGATGGGTCTTTGGGTGTTTCTTGCCAATATGAAGGTTTGGATGAAAAATCTTTGTTGAATAAGGACAGTGCTTATGAAGGGCAGGGTGCTGGAGAAAATGGATCTGATTTGGATATGGATATGAAGACAGCGGGTAGCTGTCAATTGAATGTAGAGGGGCCTAATGTGGATTTGGCACTGAAGGGAATTGAGGATCTTGATGTGTCTGAAGGGGGTTTGGTCGCAGAGGGATCTAGAAATACTCCAAAAGATGAAAAAGGGGTTGATGTTTTGCTTGATGCTGGTCTGCCACACTCTTCTGATGAAACAATGGGAGATTCTTTGTCAGGAAATTTACGATCGGCACAATCTAGTTTTGTTAGTAAGTCTTGTGCTGCTGTAAGTTCAGAGCAGAAATGTGGGAGCCAGAATGTGAATGATGGGTTGAGCCTTAACTCCAAAAGTGCCAGAAAAACTGCTGAGGGTGTACATGATTCAAACATTCACGATGGACCATTAGCCGATCCCTGTTTTTTAGCCAACGTCAGCCATGGAGATAGCCAGCAATTGTCTTGTGTACAATCTGAAGACACTTGTCCTCCTTCTGACCCAAAGGATGCATTAGAAGAAAGAATTCTCAATGATGGTTTAAAGAAGTGTTCTGCAACATTGCATGATGTTGAAGAAATCATTGACACCGTCTCTCTCCCGAAATTGGGGGCGTCTCCAATTATTGAGGGCGAGCTCAAGAATAACTTGACTGATGACCAAGCAGAACTGTGTAATATTCCTTTAAAATGCAGTGATTTTACTTCCAAGGACAAAGAAAAGTTCTCCCCTTGTGATTCTGGGCCCCTGACTAAATCATCTGAAAATATACGGGATAAAATTAATCACCTGGTTTCTGAAAATGTATTCCAGGGATCCTCAAGAAATGGAGCTATGGCATTCTCTGGATGCAACCCAAAATTAGATGAAGGTGTGCATTCTGAAAGTAAGTTTGTCTATGGTAGAAATTTCTGCGATCAGAAAATTTTAGATACAAAGGATGAAGCAAGGATTTTTGTTTCTGGTAATTTGCTTGAAAAAAATTATGCAGCTTCCGGTGGTTGTTTATATCCTACAGTGTCCGATGAAACAGTTAAATCTGAATTGGCTGCTCAGCTAAATCACCTAGAGATAGTACCTTTAGAAACACACAATATTCCAAAGGACTCTGTTGACTATATTCCAAAATGCAGTTCAGTATTAGATCCGACTCAACCTTCCAAGAATACATTTGAAAAGGCTTCTCTTGCAAATGGTGATTGTTTCTATGCCAATAGAGAAACTGAAGATGCCTCTCCTCAGAGTTCAATTCCAGAGAAAACTGAGAATTCTGCAGAATATGCTGCTTCTGTGTCTGAGGTAGCCCACTTTGATGATAAGACATCAGCTGTTATGCGCCGCAAGGGTAAAAAGCGTCGGCAAGGGGACATGGCATATGAAGGGGATGTTGATTGGGAGGTTTTAATAAACGACCAACCTTTTCTTGAAAGCCAAAGTGTTGTTGACGGTGAGCGCATTCTTAAACCAAGAGGGAAGCTTGATTCTTCTTTGAATGTTGTTGAAGAGTCTGAAAGTGATGCAGTAGCAGTATCAGCTGGGCTGAAAGCCCATGAAGCTGGTCCAGTTGAAAAAATCAGATTTCAGGAGATCTTAAAGCGGAAAGGGGGTCTCCAGGAGTATTTAGATTGCAGAAATCAGATCCTAGCTCTCTGGGGCTGCGATATCACACGTATATTGCCTCTTGCTGACTGTGGGGTTCGTGATACTCCTTCTGAGGATGAACCTCCTCGCTCTTCTCTTATTAGGGAGGTCTATACATTTCTTGATCAATGTGGTTATATAAATGTTGGAATTGCCGCTCTAAAAGACAATGTTGAAAATAGTGCAAGGCATAATTATACACTTATAGGAGAAAAAGGATATGAAGAAAGTTATGCAGCCTCTGTTGCTGATTCTGAAGATGGAGTTTCCTTTATTGTTGGTCAGACTAAAAAGTCAGATGCCCCTGTAGAAATTATGAGCAGTCTTATAGTAGGTAATGAAGACCTGACAACTGAAGCTAAAGAAGACAGGATGAGTTTTAATGTGGTGGCAATGGATATATCAAACATTACACAACATGAAAAAAGAAGGTGTTATGATTGCGAGGAAAAAGCTGGGATTCAGGATGGATTAAGTGGAATTGTACACGGGACTGAGCAAAGCAATGAATCTACCTGTCTTAAATCTGCCTCAGGTGATCTGATAGGTGATGTTCTGAATTTTGATTCAAAGATTAGAAAGAGAGTGATTGTCATTGGAGCCGGTCCTGCTGGTCTAACTGCTGCTCGCCACTTGCAACGTCTGGGATTTACTGTAACTGTACTAGAGGCAAGGAGTAGGATAGGGGGTCGAGTATTTACAGATCGCTCATCTCTTTCTGTCCCTGTGGATCTTGGTGCTAGTATTATCACCGGTGTTGAGGCTGATGTGGCTACTGAACGAAGACCAGATCCTTCCGCGTTGGTTTGTGCTCAGTTGGGTCTTGAGTTGACCGTTTTAAACAGCGACTGTCCTCTATATGACATAGTGACAGGACAAAAAGTTCCTGTAGATATGGATGAAGCACTGGAAGCTGAATACAATAGTCTTCTTGATGACATGGTATTGCTTGTTGCCCAGAAGGGTGACCAGGCTATGCGAATGTCCCTTGAAGATGGTTTAGAGTATGCCCTTAAGAGGCGCCGTTTGGAACGCTCTCGAAGAAGTAACGGACAAAGAAGTGGCAAAGAAATGGAAGAGGTCTTGAGTCCTCAAGAAAGAAGGATTATGGATTGGCACTTTGCTAATTTGGAGTATGGGTGTGCTGCTCTGCTTAAGGAGGTTTCTCTTCCCTACTGGAATCAAGATGATGTGTATGGAGGATATGGAGGAGCACATTGTATGATTAAAGGAGGTTACAGCACTGTTGTTGAGTCATTAGGTAAAGGGCTTGTCATCCATTTGAACCATGTTGTAACAAACGTGTCTTATGACGGCAAGGAATCAAGCCTGGGTAATAAAGTCAAAGTTTCTACATCAAATGGCAATGAGTTCTTTGGAGATGCTGTTCTGGTTACTGTTCCATTGGGCTGCTTGAAGGCTGAAACTATAAAATTCTCTCCACCTTTGCCCCCGTGGAAATATTCTTCTATTCAGCGTCTTGGATTTGGAGTTCTCAATAAAGTGGTCTTGGAATTTCCTAGTGTGTTTTGGGATGATGCTGTGGACTACTTCGGAGCAACAGCTGAGGAGACAAGCAGAAGAGGCCACTGCTTTATGTTCTGGAATGTCAAGAAAACAGTGGGGGCTCCGGTCCTCATAGCATTAGTAGTTGGGAAAGCGGCCATAGATGGTCAGAATTTAAGCTCTTCTGATCACGTCAACCATGCATTATTGGTTCTTCGGAAACTTTTTGGGGAGGCTTCAGTACCTGATCCTGTTGCATATGTTGTGACTGATTGGGGGAGGGATCCTTTTAGCTATGGTGCTTACTCCTATGTTGCTATTGGAGCATCGGGAGAAGACTATGATATATTAGGGAGGCCAGTTGATAAGTGTTTGTTTTTTGCTGGTGAAGCAACCTGCAAAGAGCACCCTGATACAGTTGGTGGTGCAATGATGAGTGGACTCCGAGAGGCTGTGCGCATAATTGACTTATTGAACACTGGAAATGATTATACGGCAGAGGTGGAGGCAGTGGAGGCTATACAGAAACAGTCAGATACAGAAAGAGATGAAGTTAGGGATATTATAAAGAGACTTGATGCAGCAGAGCTTTCCAACTTATTGTACAAGAAGTCTTTAGACGGTGCTCGAATCTTAAGCCGGGAAGCTTTATTAAGGGACTTGTTCCTTAATGCAAAAACCAATGCTGGGCGCTTGCATGTGGCCAAACAGTTGCTAAGTCTTCCTGTTGCAAACTTGAAATCCTTTGCTGGGAGTAAAAAGGGGCTAAGCATTCTCAACTCATGGATACTGGACTCAATGGGGAAGGATGGCACCCAACTCTTGCGACATTGTGTGCGTCTTCTTGTGCTTGTTTCAACTGATTTGCTTGCTGTGCGCTTATCAGGCATTGGGAAAACAGTGAAGGAAAAAGTTTGTGTACATACTAGCCGTGATATTCGTGCTATAGCAAGCCAGTTGGTTAGTGTATGGCTTGAAGTCTTTCGCAAGGAAAAGACATCTAATGGAGGACGAAAGCTGTCAAGACATGCAAATGCCGTAGATATATCAAAGAGAAAATGTATTAAAGATCCAGCATCAGGAAAACCACCTCTGAGTACGTATCATAGTACTTTTGAGAATAAAGGAGGTATCTTAACTCCTGCAATGGATTCAGCTTTCATTGCACAAATGAAAAAATCCCACAGCAAACAAGGAAGTCAGCAAGCGGCAAATGACTTATGGCATGATGTCAGTTCTTCTAGATCCCAAGGTTCAACAGGAAAAACAGACATCGAGATGAAGGATACCCACTGTCTGTCTGAGGAAGAAAAGGCTGCTATTGCTGCTGCAGAAGCTGCTCGTGCAAAAGCACTTGTTGCTGCTGAGGCATACACCTCTGCAGAAGTTAGGAACAATGCGCAACTCCAGCTTCCAAAGATACCCTCATTCCACAAATTTAAGAGGCGGGAACATTATTCACAAAATGATGAGAGTGATAGTAGGAAAAAATGGTCTGGTGGTGTCTTGGGAAGGCAAGATTGTATTTCAGAGATTGATTCTAGAAATTGCAGAGTTAGGGACTGGTCTGCTGATTTCTCTGCTGCTTGTGTTAACCTCGATAATTCCAGAATGTCAGCTGATAATCTCTCGCAGCGGAGTCATTCAAATGAGATTGCAACCCATTTGAATTTCAGAGAGCACTCAGGAGAAAGTGTTGCTGTGGAAAGCAGTTTATACACCAAAGCTTGGATTGACTCAGCTGATGGTGAGGGAATAAAAGACTATCAGGCCATAGAGAGATGGCAATCTCAAGCAGCTGCAGCAGGTTCTGATTTTTCCAATCCAGCCATACATTTGAAAGATGAAGAGGGTTCAAATGCCTGTTCAAGGTTACCCAGCCGGAACCATGATGGAGTGGCAAATGACAGCTCTATTTCACAGGTTACTGTGAATAAGGAGAACTCAAAAAGTCATTCTCGAGGAGCAGATTGTATCAAAAAGGCTGTAGCAGATTATGTTGCGTCTTTACTTATGCCTCTTTATAAGGCAAGAACACTAGACAGGGATGCATACAAGGCTATAATGAAGAAAAGTACAGCCAAGGTCATGGAGCAATCCACAGATGCAGATAAAGCCTTGACTGTTCACGATTTTCTAGATTTCAAGCGGAAGAATAAGATTCGACCTTTTGTGGACAAATTGATTGAGAGACACATGGAAATGAAACCAGATGTGAAATCTTAG
Protein sequence

>Msa1171050

MDNNEDMVSGNDDKRIKLVENGLDCDDNEPIFKLRKPRCVKKKLCLVSEGTDGNAVDSVGKFVDVVAQEDLGGMDDTLACFRKRLKGPKRDRGSRGANEKDSNVNVAVESSDGSLGVSCQYEGLDEKSLLNKDSAYEGQGAGENGSDLDMDMKTAGSCQLNVEGPNVDLALKGIEDLDVSEGGLVAEGSRNTPKDEKGVDVLLDAGLPHSSDETMGDSLSGNLRSAQSSFVSKSCAAVSSEQKCGSQNVNDGLSLNSKSARKTAEGVHDSNIHDGPLADPCFLANVSHGDSQQLSCVQSEDTCPPSDPKDALEERILNDGLKKCSATLHDVEEIIDTVSLPKLGASPIIEGELKNNLTDDQAELCNIPLKCSDFTSKDKEKFSPCDSGPLTKSSENIRDKINHLVSENVFQGSSRNGAMAFSGCNPKLDEGVHSESKFVYGRNFCDQKILDTKDEARIFVSGNLLEKNYAASGGCLYPTVSDETVKSELAAQLNHLEIVPLETHNIPKDSVDYIPKCSSVLDPTQPSKNTFEKASLANGDCFYANRETEDASPQSSIPEKTENSAEYAASVSEVAHFDDKTSAVMRRKGKKRRQGDMAYEGDVDWEVLINDQPFLESQSVVDGERILKPRGKLDSSLNVVEESESDAVAVSAGLKAHEAGPVEKIRFQEILKRKGGLQEYLDCRNQILALWGCDITRILPLADCGVRDTPSEDEPPRSSLIREVYTFLDQCGYINVGIAALKDNVENSARHNYTLIGEKGYEESYAASVADSEDGVSFIVGQTKKSDAPVEIMSSLIVGNEDLTTEAKEDRMSFNVVAMDISNITQHEKRRCYDCEEKAGIQDGLSGIVHGTEQSNESTCLKSASGDLIGDVLNFDSKIRKRVIVIGAGPAGLTAARHLQRLGFTVTVLEARSRIGGRVFTDRSSLSVPVDLGASIITGVEADVATERRPDPSALVCAQLGLELTVLNSDCPLYDIVTGQKVPVDMDEALEAEYNSLLDDMVLLVAQKGDQAMRMSLEDGLEYALKRRRLERSRRSNGQRSGKEMEEVLSPQERRIMDWHFANLEYGCAALLKEVSLPYWNQDDVYGGYGGAHCMIKGGYSTVVESLGKGLVIHLNHVVTNVSYDGKESSLGNKVKVSTSNGNEFFGDAVLVTVPLGCLKAETIKFSPPLPPWKYSSIQRLGFGVLNKVVLEFPSVFWDDAVDYFGATAEETSRRGHCFMFWNVKKTVGAPVLIALVVGKAAIDGQNLSSSDHVNHALLVLRKLFGEASVPDPVAYVVTDWGRDPFSYGAYSYVAIGASGEDYDILGRPVDKCLFFAGEATCKEHPDTVGGAMMSGLREAVRIIDLLNTGNDYTAEVEAVEAIQKQSDTERDEVRDIIKRLDAAELSNLLYKKSLDGARILSREALLRDLFLNAKTNAGRLHVAKQLLSLPVANLKSFAGSKKGLSILNSWILDSMGKDGTQLLRHCVRLLVLVSTDLLAVRLSGIGKTVKEKVCVHTSRDIRAIASQLVSVWLEVFRKEKTSNGGRKLSRHANAVDISKRKCIKDPASGKPPLSTYHSTFENKGGILTPAMDSAFIAQMKKSHSKQGSQQAANDLWHDVSSSRSQGSTGKTDIEMKDTHCLSEEEKAAIAAAEAARAKALVAAEAYTSAEVRNNAQLQLPKIPSFHKFKRREHYSQNDESDSRKKWSGGVLGRQDCISEIDSRNCRVRDWSADFSAACVNLDNSRMSADNLSQRSHSNEIATHLNFREHSGESVAVESSLYTKAWIDSADGEGIKDYQAIERWQSQAAAAGSDFSNPAIHLKDEEGSNACSRLPSRNHDGVANDSSISQVTVNKENSKSHSRGADCIKKAVADYVASLLMPLYKARTLDRDAYKAIMKKSTAKVMEQSTDADKALTVHDFLDFKRKNKIRPFVDKLIERHMEMKPDVKS*