AlfalfaGEDB | Msa1393820

M. sativa cultivar zhongmu-4 / Msa1393820

KEGG: K11000
GO: GO:0000003 GO:0000278 GO:0000280 GO:0001558 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0006996 GO:0007049 GO:0007275 GO:0007276 GO:0008150 GO:0009555 GO:0009556 GO:0009846 GO:0009856 GO:0009987 GO:0010769 GO:0012505 GO:0016020 GO:0016043 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0022603 GO:0022604 GO:0032501 GO:0032502 GO:0032504 GO:0033036 GO:0033037 GO:0034293 GO:0040007 GO:0040008 GO:0042545 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0043934 GO:0044424 GO:0044444 GO:0044464 GO:0044703 GO:0044706 GO:0045229 GO:0045595 GO:0048229 GO:0048232 GO:0048236 GO:0048285 GO:0048589 GO:0048609 GO:0048638 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051128 GO:0051179 GO:0051239 GO:0051321 GO:0051510 GO:0051641 GO:0051704 GO:0052386 GO:0052543 GO:0052545 GO:0055047 GO:0060284 GO:0065007 GO:0070727 GO:0071554 GO:0071555 GO:0071840 GO:0071944 GO:0080092 GO:0140014 GO:1903046 GO:1903047 GO:2000241
PFAM: PF14288.9

Nr:

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Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1393820	KAB1227940.1	76.080	1551	222	11	297	1715	1	1534	0.0	2388

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Swissprot:

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Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1393820	sp\|Q9SFU6\|CALS9_ARATH	69.884	1554	305	12	297	1715	365	1890	0.0	2197
Msa1393820	sp\|Q9SFU6\|CALS9_ARATH	73.986	296	73	2	1	296	1	292	1.24e-126	442

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Trembl:

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Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1393820	A0A072VRY1	90.609	1544	5	5	297	1715	369	1897	0.0	2815
Msa1393820	A0A072VRY1	96.764	309	7	1	1	309	1	306	0.0	608

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TFs/TRs:

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Gene ID	Type	Classification
No data available in table

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Protein Kinases:

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Gene ID	Type	Classification
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Network:

Co-expression Network

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Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0000880	Msa1393820	0.895580	8.376164e-76	-8.615850e-47
Msa0000910	Msa1393820	0.838437	2.877640e-57	-8.615850e-47
Msa0001960	Msa1393820	0.813748	2.187779e-51	-8.615850e-47
Msa0002560	Msa1393820	0.846989	1.535959e-59	-8.615850e-47
Msa0002680	Msa1393820	0.876823	1.027987e-68	-8.615850e-47
Msa0002710	Msa1393820	0.840504	8.358181e-58	-8.615850e-47
Msa0003220	Msa1393820	0.888966	3.691415e-73	-8.615850e-47
Msa0003270	Msa1393820	0.857798	1.276409e-62	-8.615850e-47
Msa0005620	Msa1393820	0.829959	3.843267e-55	-8.615850e-47
Msa0008220	Msa1393820	0.806906	6.550574e-50	-8.615850e-47

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PPI

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Gene1	Gene2	Type
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Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1393820	MtrunA17_Chr1g0213461	90.609	1544	5	5	297	1715	369	1897	0.0	2815
Msa1393820	MtrunA17_Chr1g0213461	96.764	309	7	1	1	309	1	306	0.0	608
Msa1393820	MtrunA17_Chr3g0116421	58.820	1559	468	15	297	1713	382	1908	0.0	1867
Msa1393820	MtrunA17_Chr3g0116421	46.626	326	161	3	4	316	6	331	4.83e-86	313
Msa1393820	MtrunA17_Chr3g0130141	45.026	1548	659	25	328	1712	400	1918	0.0	1268
Msa1393820	MtrunA17_Chr3g0130141	33.704	270	148	9	37	299	35	280	1.56e-24	112
Msa1393820	MtrunA17_Chr7g0214481	43.916	1578	667	29	325	1709	396	1948	0.0	1205
Msa1393820	MtrunA17_Chr7g0214481	32.624	282	169	7	37	316	38	300	9.18e-32	136
Msa1393820	MtrunA17_Chr2g0308711	42.866	1570	685	27	328	1710	394	1938	0.0	1198
Msa1393820	MtrunA17_Chr2g0308711	32.414	290	157	9	37	316	35	295	5.68e-30	130

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Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1393820	AT3G07160.1	69.884	1554	305	12	297	1715	365	1890	0.0	2197
Msa1393820	AT3G07160.1	73.986	296	73	2	1	296	1	292	1.26e-127	442
Msa1393820	AT3G07160.3	69.884	1554	307	12	297	1715	365	1892	0.0	2196
Msa1393820	AT3G07160.3	73.986	296	73	2	1	296	1	292	1.57e-127	442
Msa1393820	AT3G07160.2	69.884	1554	307	12	297	1715	365	1892	0.0	2196
Msa1393820	AT3G07160.2	73.986	296	73	2	1	296	1	292	1.57e-127	442
Msa1393820	AT2G36850.1	58.050	1559	479	14	297	1713	377	1902	0.0	1806
Msa1393820	AT2G36850.1	51.603	312	135	4	1	300	1	308	1.57e-86	315
Msa1393820	AT2G13680.1	44.919	1545	663	25	328	1710	402	1920	0.0	1234
Msa1393820	AT2G13680.1	30.928	291	166	10	37	316	37	303	3.36e-23	108

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Find 395 sgRNAs with CRISPR-Local

Find 2553 sgRNAs with CRISPR-GE

CRISPR-Local

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CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAAATAGAAGCAAATATGTC+CGG	0.508314	tig0021759:+18590	None:intergenic
AAAATCATCATAATTTCTCC+AGG	0.499966	tig0021759:+43196	None:intergenic
AAAATGAAATGAAATGAAAG+AGG	0.535791	tig0021759:+53164	None:intergenic
AAACAGCATCTATTACAATT+AGG	0.373568	tig0021759:+16994	None:intergenic
AAACATACATATTCTGGAAA+CGG	0.532473	tig0021759:+52496	None:intergenic
AAACCACGAAAAGAATGCAA+TGG	0.598378	tig0021759:+17377	None:intergenic
AAACCTGGGATTCTCTTCTT+GGG	0.454538	tig0021759:+16941	None:intergenic
AAACGTACTCGCCAAGATTC+CGG	0.323177	tig0021759:+51575	None:intergenic
AAAGAAATATCCACAATCGG+TGG	0.643909	tig0021759:+40012	None:intergenic
AAAGATAACATTTGCCGAAC+TGG	0.353923	tig0021759:+31603	None:intergenic

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CRISPR-GE

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sgRNA_sequence	Strand	Position	Region	GC_content
TATTCAGTGGTCAAATTGAA+GGG	+	tig0021759:17778-17797	None:intergenic	30.0%
ATATTCAGTGGTCAAATTGA+AGG	+	tig0021759:17779-17798	None:intergenic	30.0%
AATCCTGCAATGAGATTATA+AGG	+	tig0021759:18103-18122	None:intergenic	30.0%
TCTTGTAGAATTCTTGTAGT+CGG	+	tig0021759:18448-18467	None:intergenic	30.0%
TAATGTAGATAGATTACGTG+AGG	-	tig0021759:18484-18503	Msa1393820:intron	30.0%
CAATCAAACTTTAATTGGAC+AGG	+	tig0021759:18744-18763	None:intergenic	30.0%
CATAACTCAATGAAATTGAG+TGG	+	tig0021759:19248-19267	None:intergenic	30.0%
CACTCAATTTCATTGAGTTA+TGG	-	tig0021759:19246-19265	Msa1393820:intron	30.0%
TAATAGGGCATATATGACAT+TGG	+	tig0021759:19344-19363	None:intergenic	30.0%
TTCTACAATGCAGTAACAAA+AGG	+	tig0021759:19425-19444	None:intergenic	30.0%

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Chromosome	Type	Strat	End	Strand	Name
tig0021759	gene	16929	53209	16929	ID=Msa1393820;Name=Msa1393820
tig0021759	mRNA	16929	53209	16929	ID=Msa1393820-mRNA-1;Parent=Msa1393820;Name=Msa1393820-mRNA-1;_AED=0.15;_eAED=0.15;_QI=207\|0.84\|0.93\|0.97\|0.97\|0.97\|47\|340\|1715
tig0021759	exon	16929	17505	16929	ID=Msa1393820-mRNA-1:exon:14078;Parent=Msa1393820-mRNA-1
tig0021759	exon	18556	18738	18556	ID=Msa1393820-mRNA-1:exon:14077;Parent=Msa1393820-mRNA-1
tig0021759	exon	18824	18874	18824	ID=Msa1393820-mRNA-1:exon:14076;Parent=Msa1393820-mRNA-1
tig0021759	exon	19959	20078	19959	ID=Msa1393820-mRNA-1:exon:14075;Parent=Msa1393820-mRNA-1
tig0021759	exon	20311	20413	20311	ID=Msa1393820-mRNA-1:exon:14074;Parent=Msa1393820-mRNA-1
tig0021759	exon	20718	20876	20718	ID=Msa1393820-mRNA-1:exon:14073;Parent=Msa1393820-mRNA-1
tig0021759	exon	22139	22227	22139	ID=Msa1393820-mRNA-1:exon:14072;Parent=Msa1393820-mRNA-1
tig0021759	exon	22639	22797	22639	ID=Msa1393820-mRNA-1:exon:14071;Parent=Msa1393820-mRNA-1
tig0021759	exon	23020	23067	23020	ID=Msa1393820-mRNA-1:exon:14070;Parent=Msa1393820-mRNA-1
tig0021759	exon	24797	24973	24797	ID=Msa1393820-mRNA-1:exon:14069;Parent=Msa1393820-mRNA-1
tig0021759	exon	25036	25088	25036	ID=Msa1393820-mRNA-1:exon:14068;Parent=Msa1393820-mRNA-1
tig0021759	exon	26227	26339	26227	ID=Msa1393820-mRNA-1:exon:14067;Parent=Msa1393820-mRNA-1
tig0021759	exon	26426	26509	26426	ID=Msa1393820-mRNA-1:exon:14066;Parent=Msa1393820-mRNA-1
tig0021759	exon	26598	26713	26598	ID=Msa1393820-mRNA-1:exon:14065;Parent=Msa1393820-mRNA-1
tig0021759	exon	27571	27690	27571	ID=Msa1393820-mRNA-1:exon:14064;Parent=Msa1393820-mRNA-1
tig0021759	exon	28536	28650	28536	ID=Msa1393820-mRNA-1:exon:14063;Parent=Msa1393820-mRNA-1
tig0021759	exon	28773	28950	28773	ID=Msa1393820-mRNA-1:exon:14062;Parent=Msa1393820-mRNA-1
tig0021759	exon	29026	29094	29026	ID=Msa1393820-mRNA-1:exon:14061;Parent=Msa1393820-mRNA-1
tig0021759	exon	29756	29890	29756	ID=Msa1393820-mRNA-1:exon:14060;Parent=Msa1393820-mRNA-1
tig0021759	exon	31418	31527	31418	ID=Msa1393820-mRNA-1:exon:14059;Parent=Msa1393820-mRNA-1
tig0021759	exon	31600	31760	31600	ID=Msa1393820-mRNA-1:exon:14058;Parent=Msa1393820-mRNA-1
tig0021759	exon	31835	31922	31835	ID=Msa1393820-mRNA-1:exon:14057;Parent=Msa1393820-mRNA-1
tig0021759	exon	32067	32164	32067	ID=Msa1393820-mRNA-1:exon:14056;Parent=Msa1393820-mRNA-1
tig0021759	exon	32622	32742	32622	ID=Msa1393820-mRNA-1:exon:14055;Parent=Msa1393820-mRNA-1
tig0021759	exon	32862	33011	32862	ID=Msa1393820-mRNA-1:exon:14054;Parent=Msa1393820-mRNA-1
tig0021759	exon	35845	35939	35845	ID=Msa1393820-mRNA-1:exon:14053;Parent=Msa1393820-mRNA-1
tig0021759	exon	36132	36156	36132	ID=Msa1393820-mRNA-1:exon:14052;Parent=Msa1393820-mRNA-1
tig0021759	exon	36784	36869	36784	ID=Msa1393820-mRNA-1:exon:14051;Parent=Msa1393820-mRNA-1
tig0021759	exon	37020	37106	37020	ID=Msa1393820-mRNA-1:exon:14050;Parent=Msa1393820-mRNA-1
tig0021759	exon	37925	37985	37925	ID=Msa1393820-mRNA-1:exon:14049;Parent=Msa1393820-mRNA-1
tig0021759	exon	38255	38307	38255	ID=Msa1393820-mRNA-1:exon:14048;Parent=Msa1393820-mRNA-1
tig0021759	exon	38432	38606	38432	ID=Msa1393820-mRNA-1:exon:14047;Parent=Msa1393820-mRNA-1
tig0021759	exon	38723	38846	38723	ID=Msa1393820-mRNA-1:exon:14046;Parent=Msa1393820-mRNA-1
tig0021759	exon	39698	39800	39698	ID=Msa1393820-mRNA-1:exon:14045;Parent=Msa1393820-mRNA-1
tig0021759	exon	39998	40117	39998	ID=Msa1393820-mRNA-1:exon:14044;Parent=Msa1393820-mRNA-1
tig0021759	exon	40366	40410	40366	ID=Msa1393820-mRNA-1:exon:14043;Parent=Msa1393820-mRNA-1
tig0021759	exon	40495	40573	40495	ID=Msa1393820-mRNA-1:exon:14042;Parent=Msa1393820-mRNA-1
tig0021759	exon	43182	43258	43182	ID=Msa1393820-mRNA-1:exon:14041;Parent=Msa1393820-mRNA-1
tig0021759	exon	45944	46036	45944	ID=Msa1393820-mRNA-1:exon:14040;Parent=Msa1393820-mRNA-1
tig0021759	exon	48405	48494	48405	ID=Msa1393820-mRNA-1:exon:14039;Parent=Msa1393820-mRNA-1
tig0021759	exon	50048	50173	50048	ID=Msa1393820-mRNA-1:exon:14038;Parent=Msa1393820-mRNA-1
tig0021759	exon	50257	50367	50257	ID=Msa1393820-mRNA-1:exon:14037;Parent=Msa1393820-mRNA-1
tig0021759	exon	51047	51143	51047	ID=Msa1393820-mRNA-1:exon:14036;Parent=Msa1393820-mRNA-1
tig0021759	exon	51583	51746	51583	ID=Msa1393820-mRNA-1:exon:14035;Parent=Msa1393820-mRNA-1
tig0021759	exon	52226	52323	52226	ID=Msa1393820-mRNA-1:exon:14034;Parent=Msa1393820-mRNA-1
tig0021759	exon	52504	52705	52504	ID=Msa1393820-mRNA-1:exon:14033;Parent=Msa1393820-mRNA-1
tig0021759	exon	53003	53209	53003	ID=Msa1393820-mRNA-1:exon:14032;Parent=Msa1393820-mRNA-1
tig0021759	five_prime_UTR	53003	53209	53003	ID=Msa1393820-mRNA-1:five_prime_utr;Parent=Msa1393820-mRNA-1
tig0021759	CDS	52504	52705	52504	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	52226	52323	52226	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	51583	51746	51583	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	51047	51143	51047	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	50257	50367	50257	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	50048	50173	50048	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	48405	48494	48405	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	45944	46036	45944	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	43182	43258	43182	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	40495	40573	40495	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	40366	40410	40366	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	39998	40117	39998	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	39698	39800	39698	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	38723	38846	38723	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	38432	38606	38432	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	38255	38307	38255	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	37925	37985	37925	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	37020	37106	37020	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	36784	36869	36784	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	36132	36156	36132	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	35845	35939	35845	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	32862	33011	32862	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	32622	32742	32622	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	32067	32164	32067	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	31835	31922	31835	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	31600	31760	31600	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	31418	31527	31418	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	29756	29890	29756	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	29026	29094	29026	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	28773	28950	28773	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	28536	28650	28536	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	27571	27690	27571	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	26598	26713	26598	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	26426	26509	26426	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	26227	26339	26227	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	25036	25088	25036	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	24797	24973	24797	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	23020	23067	23020	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	22639	22797	22639	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	22139	22227	22139	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	20718	20876	20718	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	20311	20413	20311	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	19959	20078	19959	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	18824	18874	18824	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	18556	18738	18556	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	CDS	17269	17505	17269	ID=Msa1393820-mRNA-1:cds;Parent=Msa1393820-mRNA-1
tig0021759	three_prime_UTR	16929	17268	16929	ID=Msa1393820-mRNA-1:three_prime_utr;Parent=Msa1393820-mRNA-1

Gene Sequence

>Msa1393820

ATGTCTCGACCTGAGGAGCTTTGGGAGCGGTTAGTTAGGGCTGCTTTGAGAAGGGAGAGAACCGGCGATGATGCATATGGCCGACCTGCTGCTGGAATTGCTGGAAATGTGCCTTCTGCTCTTGCTAAAAATAGAGACATTGATGAAATTTTAAGAGTTGCTGATGAGATTCAAGACGAAGATCCCACCGTTTCCAGAATATTATGTGAGCATGCATATTCGTTATCACAAAATCTGGACCCCAATAGTGAAGGCCGAGGGGTTTTACAATTCAAGACCGGTTTGATGTCTGTCATTAAGCAAAAGCTGGCTAAAAAGGAAGTTGGAACCATAGATAGAAGTCAGGACATTGCCCGACTACAAGAATTCTACAAGAGTTACAGAAAGAAGAATAATGTAGATAGATTACGTGAGGAGGAAATGCAGTTGAGGGAATCTGGTGCTTTCAGCCGGAATCTTGGCGAGTTGGAGCGCAAGACTGTGAAGAGGAAAAGAGTTTTTGCTACCTTAAAGGTTTTAGGAACAGTGCTTGAGCAACTGAGTGAAGAAATTCCTGATGAGCTTAAGCGGGTCATGGAATCAGATTCTGCATCGACGGAGGATCTGATTGCTTACAACATCATCCCTATAGATGCTACTACTTCAACAAATGCTATTGTTTTTTTCCCCGAGGTGCAAGCAGCAGTTTCAGCTCTCAAGTATTTCAGTGGCTTGCCTGAACTGCCCAGGGCCTATTTCATTTCTCCCACAAGGAATGCCAACATGTTAGATTTTCTGCAGTATACTTTTGGATTTCAGAAAGATAATGTTGCTAATCAGCATGAACACATAGTTCATCTGCTTGCAAATGAGCAATCTCGGCTTGGAGTTCCAGACAAAACCGAACCCATGGCTAGAGAGATGGATGAGATTTTAAGGCAGCAGATTGCGCAGACAGCTAATAGTTGCACTTCTGAGAATGGCGTGTCATTCCTTGATCATGAAGCTGCAAGCAATGATAATGGGAAGGCATCTCATTCCTCCTGGAGAAATTATGATGATTTTAATGAGTATTTCTGGTCACTACATTGCTTTGAGCTTAGCTGGCCGTGGCGCAAAAGTTCTTCATTTTTCCAAAAGCCACAACCTAGATCAAAGGTCAGTGATAATGATACTTATACTAAGAATGATACACTAGGAATGAAAATGTTATCTGGCAGAAGTCAACGTCAGGGGAAAACATCTTTTGTGGAGCATCGGACTTTTTTTCATCTTTATCATAGTTTCCACCGATTGTGGATATTTCTTTTCATGATGTTCCAGGGTCTAGCAATTATTGCTTTCAATGATGAAAAATTTAATTCCAAGACCTTGCGAGAGGTTCTTAGTCTTGGACCTACATTTGTTGTGATGAAGTTTTTCGAGAGTGTCCTGGATATTTTTATGATGTATGGTGCATATACAACAACGAGGCGGTCAGCTCTATCAAGAATTTTTCTAAGATTTCTTTGGTTTAGCCTTGCTTCAGTTTTTGTAACTTTCCTTTATGTAAAAGCACTCCAGGATCCAAATTCAGTTATTTTCAGATTATATGTAATTATCGTTGGGATTTATGCTGGTGTCCAGTTTTTCATTAGCTTCCTCATGCGGATTCCTGCATGTCATCTTCTGACAAACCAGTGTGATCGCTGGCCTCTCATTCGCTTTGTCAAGTGGCTACGCCAGGAGCGACATTATGTTGGACGGGGAATGTACGAAAGGAGTTTGGATTTCATAAAGTATATGCTGTTTTGGCTTGTCATTTTGAGTGCAAAATTTTCGTTTGCTTACTTTCTTCAGATTTATCTATTGGACATATATGTGTTTTACACTCTTGTATCGGCCGTATGGGGATTCTTGCTTGGGGCAAGAGCTCGTCTGGGAGAGATAAGGTCATTGGAAGCCCTGCAAAAACTTTTTGAGCAGTTTCCTGGAGCTTTCATGGACACTCTTCATGTTGCTCTTCCCAACAGGAGTGCCCAACTGTCTTCTGTTCAGGTTGTTGAAAAGAACAAAGTTGATGCTGCTCGGTTCTCCCCGTTTTGGAATGAGATTATCAGAAATCTAAGGGAGGAAGATTATATAACCAACTTGGATCTTGCTGTTGAGAGTAATAAGGATACTCAAGATGAGCTTTGGGATAGGATTTCAAGAGACGACTATATGTTGTATGCAGTTCAGGAGTGTTACTATGCTGTTAAACACATTTTAACAGAAGTATTAGATGATGCAGGAAGAATGTGGGTTGAAAGGATATATGATGATATTAATGCTAGTGCAACAAAGAGGAGTATTCATGTGGACTTTCGACTGAATAAGCTGGCTGTTGTGATATCAAGAATAACTGCACTGATGGGGATTCTGAAAGAGACTGAAACACCTGAGCTTGAAAGAGGTGCAGTTAGGGCTGTTCAGGATCTTTACGATGTTGTACGATATGATGTCCTTTCTATAGATATGAGGGATAATTATGGCACATGGAGTTTACTGACCAAAGCTAGAGATGAAGGGCATTTGTTTCAAAAGTTGAAATGGCCAAATGCAGAATTAAGAATGCAAGTCAAAAGATTATATTCATTGCTGACTATAAAAGACTCTGCGTCAAGCGTTCCTAGAAATCTTGAGGCTAGGCGAAGGCTAGAGTTTTTTGCTAATTCACTCTTTATGAAGATGCCTCATGCAAAGCCAGTTCGGCAAATGTTATCTTTTAGTGTTTTCACACCTTACTATTCTGAGATTGTGCTCTATAGCATGGATGAGCTTTTAAAGAAAAATGAAGATGGTATTTCAATTTTGTTCTACCTTCAGAAGATATTTCCAGATGAGTGGAAAAACTTTCTTGCCCGAATCGGCCGTGATGAAAATGCAAGTGACACTGATCTTTTTGATAGTGCTAGTGATATTCTTGAATTGCGTTTTTGGGCTTCTTATCGAGGGCAAACATTGGCCAGAACTGTTCGGGGGATGATGTATTATAGGAAAGCTCTTATGCTTCAGACCTATTTGGAGAGGACTACAGCTGGAGATTTGGAGGCTGGAGTTGGTTTTGATGAAGTATCTGATACACGTGGCTTTGATTTATCCCCTGAAGCACGTGCTCAGGCGGATCTGAAGTTCACTTATGTTGTGACATGTCAAATTTATGGTAAGCAGAAAGAAGAGCAAAAGCCTGAAGCAGTTGATATCGCTTTACTTATGCAAAGAAATGAAGCTCTTCGTGTTGCTTTTATTGATGTTGTTGAAACTTTAAGAGATGGAAAAGTGAACACGGAATACTACTCAAAGCTTGTGAAAGCTGATATTAATGGGAAAGACAAGGAAATATACTCGGTGAAATTACCTGGAAATCCCAAACTTGGCGAAGGGAAACCTGAGAATCAAAATCATGCCATTATATTTACGCGTGGAAATGCAGTTCAAACAATTGACATGAATCAGGATAACTATTTTGAGGAGGCTCTGAAGATGAGGAATCTTCTGGAGGAATTTCATTCTGATCATGGTCTTCGTCCTCCCACCATACTTGGTGTTAGAGAGCATGTATTTACTGGAAGTGTGTCATCTTTGGCTTCATTCATGTCCAATCAAGAAACAAGTTTTGTGACTTTGGGTCAGCGGGTTTTAGCAAATCCTTTGAAAGTTCGTATGCATTATGGTCATCCTGATGTTTTTGATAGAGTCTTCCACATAACCCGCGGTGGTATCAGCAAGGCTTCCCGTGTTATCAATATTAGTGAAGATATCTACTCAGGATTCAATTCAACATTGCGTCAAGGAAACATTACTCATCATGAATATATTCAGGTTGGTAAGGGAAGGGATGTGGGCCTCAATCAGATTGCACTATTCGAGGGGAAAGTTTCAAGTGGTAACGGTGAACAAGTCCTGAGTCGGGATATATACCGACTTGGGCAACTTTTTGATTTCTTCCGGATGATGTCTTTTTACTTCACAACAGTTGGATACTACTTTTGTACCATGTTAACAGTGCTGACAGTTTATGCCTTTCTTTATGGAAAAACGTATTTGGCACTTTCTGGTGTTGGTGAAATAATTGAAGAAAGGGCTAAGATAACCAAGAATACTGCTCTGAGTGCTGCTTTGAATACACAGTTTCTCTTCCAAATTGGTATATTCACTGCTGTGCCAATGGTCTTGGGCTTCGTTCTTGAACAAGGCTTCTTGAGGTATCAAGCGACAGGCCGAGGATTTGTAGTTCGCCATATCAAATTTTCTGAAAATTACAGACTCTACTCTCGTAGTCATTTTGTTAAAGGGTTGGAAGTGGTACTTCTATTGATAGTATATCTTGCTTATGGCTACAATGATGGTGGTGCACTGTCATACATTCTTCTAAGCTTAAGCAGTTGGTTTATGGCTCTATCCTGGTTGTTTGCTCCCTATTTATTCAACCCGTCAGGATTTGAGTGGCAAAAGGTAGTGGTAGACTTCCGAGACTGGACAAATTGGCTACTTTATAGAGGTGGAATTGGTGTTAAGGGAGAAGAAAGCTGGGAAGCTTGGTGGGAAGAAGAACTGGCTCATATCAGGAGCTTGGGTTCAAGGATTGCAGAGACCATCCTGAGTCTGAGATTTTTCATTTTCCAATATGGCATTGTGTATAAGCTTAACATAAAAGGAACTGATACTTCATTGACGGTTTATGGATTATCATGGGTCGTATTGGCAGTGCTAATAATTCTTTTTAAGGTATTCACCTTTAGCCAGAAGATATCAGTCAATTTCCAACTTGTGTTGCGGTTTGTACAAGGATTATCCCTTTTGTTGGCGCTGGCTGGTTTGGTTGTAGCAATTATATTAACTGACCTATCTGTACCGGACATATTTGCTTCTATTTTAGCATTCATTCCTACTGGATGGGGAATTTTATCGATTGCTGCTGCATGGAAGCCTGTGATGAAAAGGCTAGGACTATGGAAGTTCATTCGGTCGCTTGCACGTCTATATGATGCTGGCATGGGAATGCTCATCTTTGTGCCCATTGCATTCTTTTCGTGGTTTCCATTTGTATCAACATTCCAAACTCGCCTGATGTTTAACCAGGCATTTAGCCGAGGGTTAGAAATTTCTTTAATCCTTGCTGGGAACAATCCCAATACTGGGATATAG

Protein sequence

>Msa1393820

MSRPEELWERLVRAALRRERTGDDAYGRPAAGIAGNVPSALAKNRDIDEILRVADEIQDEDPTVSRILCEHAYSLSQNLDPNSEGRGVLQFKTGLMSVIKQKLAKKEVGTIDRSQDIARLQEFYKSYRKKNNVDRLREEEMQLRESGAFSRNLGELERKTVKRKRVFATLKVLGTVLEQLSEEIPDELKRVMESDSASTEDLIAYNIIPIDATTSTNAIVFFPEVQAAVSALKYFSGLPELPRAYFISPTRNANMLDFLQYTFGFQKDNVANQHEHIVHLLANEQSRLGVPDKTEPMAREMDEILRQQIAQTANSCTSENGVSFLDHEAASNDNGKASHSSWRNYDDFNEYFWSLHCFELSWPWRKSSSFFQKPQPRSKVSDNDTYTKNDTLGMKMLSGRSQRQGKTSFVEHRTFFHLYHSFHRLWIFLFMMFQGLAIIAFNDEKFNSKTLREVLSLGPTFVVMKFFESVLDIFMMYGAYTTTRRSALSRIFLRFLWFSLASVFVTFLYVKALQDPNSVIFRLYVIIVGIYAGVQFFISFLMRIPACHLLTNQCDRWPLIRFVKWLRQERHYVGRGMYERSLDFIKYMLFWLVILSAKFSFAYFLQIYLLDIYVFYTLVSAVWGFLLGARARLGEIRSLEALQKLFEQFPGAFMDTLHVALPNRSAQLSSVQVVEKNKVDAARFSPFWNEIIRNLREEDYITNLDLAVESNKDTQDELWDRISRDDYMLYAVQECYYAVKHILTEVLDDAGRMWVERIYDDINASATKRSIHVDFRLNKLAVVISRITALMGILKETETPELERGAVRAVQDLYDVVRYDVLSIDMRDNYGTWSLLTKARDEGHLFQKLKWPNAELRMQVKRLYSLLTIKDSASSVPRNLEARRRLEFFANSLFMKMPHAKPVRQMLSFSVFTPYYSEIVLYSMDELLKKNEDGISILFYLQKIFPDEWKNFLARIGRDENASDTDLFDSASDILELRFWASYRGQTLARTVRGMMYYRKALMLQTYLERTTAGDLEAGVGFDEVSDTRGFDLSPEARAQADLKFTYVVTCQIYGKQKEEQKPEAVDIALLMQRNEALRVAFIDVVETLRDGKVNTEYYSKLVKADINGKDKEIYSVKLPGNPKLGEGKPENQNHAIIFTRGNAVQTIDMNQDNYFEEALKMRNLLEEFHSDHGLRPPTILGVREHVFTGSVSSLASFMSNQETSFVTLGQRVLANPLKVRMHYGHPDVFDRVFHITRGGISKASRVINISEDIYSGFNSTLRQGNITHHEYIQVGKGRDVGLNQIALFEGKVSSGNGEQVLSRDIYRLGQLFDFFRMMSFYFTTVGYYFCTMLTVLTVYAFLYGKTYLALSGVGEIIEERAKITKNTALSAALNTQFLFQIGIFTAVPMVLGFVLEQGFLRYQATGRGFVVRHIKFSENYRLYSRSHFVKGLEVVLLLIVYLAYGYNDGGALSYILLSLSSWFMALSWLFAPYLFNPSGFEWQKVVVDFRDWTNWLLYRGGIGVKGEESWEAWWEEELAHIRSLGSRIAETILSLRFFIFQYGIVYKLNIKGTDTSLTVYGLSWVVLAVLIILFKVFTFSQKISVNFQLVLRFVQGLSLLLALAGLVVAIILTDLSVPDIFASILAFIPTGWGILSIAAAWKPVMKRLGLWKFIRSLARLYDAGMGMLIFVPIAFFSWFPFVSTFQTRLMFNQAFSRGLEISLILAGNNPNTGI*