Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1174400 | KEH18476.1 | 93.827 | 243 | 15 | 0 | 1 | 243 | 1 | 243 | 2.45e-168 | 474 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1174400 | sp|A4ZDG8|BSMT3_PETHY | 55.967 | 243 | 106 | 1 | 1 | 243 | 1 | 242 | 2.85e-95 | 286 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1174400 | Msa1319010 | 0.843490 | 1.356766e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1174400 | MtrunA17_Chr8g0343981 | 93.827 | 243 | 15 | 0 | 1 | 243 | 1 | 243 | 4.30e-172 | 478 |
| Msa1174400 | MtrunA17_Chr8g0343971 | 77.366 | 243 | 55 | 0 | 1 | 243 | 1 | 243 | 1.03e-141 | 401 |
| Msa1174400 | MtrunA17_Chr8g0372671 | 68.724 | 243 | 75 | 1 | 1 | 243 | 1 | 242 | 7.82e-124 | 355 |
| Msa1174400 | MtrunA17_Chr3g0107591 | 66.667 | 243 | 79 | 2 | 1 | 243 | 1 | 241 | 3.42e-119 | 344 |
| Msa1174400 | MtrunA17_Chr6g0475241 | 66.393 | 244 | 80 | 2 | 1 | 243 | 1 | 243 | 1.16e-117 | 340 |
| Msa1174400 | MtrunA17_Chr4g0008111 | 67.078 | 243 | 79 | 1 | 1 | 243 | 1 | 242 | 1.37e-117 | 340 |
| Msa1174400 | MtrunA17_Chr8g0372821 | 65.021 | 243 | 84 | 1 | 1 | 243 | 1 | 242 | 2.85e-114 | 332 |
| Msa1174400 | MtrunA17_Chr5g0404631 | 61.066 | 244 | 93 | 2 | 1 | 243 | 11 | 253 | 3.96e-111 | 324 |
| Msa1174400 | MtrunA17_Chr6g0475221 | 65.021 | 243 | 76 | 2 | 1 | 243 | 1 | 234 | 5.92e-111 | 323 |
| Msa1174400 | MtrunA17_Chr3g0144871 | 47.791 | 249 | 119 | 2 | 1 | 243 | 1 | 244 | 2.44e-80 | 245 |
| Msa1174400 | MtrunA17_Chr5g0419851 | 46.914 | 243 | 122 | 2 | 1 | 237 | 61 | 302 | 1.85e-71 | 224 |
| Msa1174400 | MtrunA17_Chr8g0372801 | 66.667 | 132 | 44 | 0 | 90 | 221 | 31 | 162 | 3.28e-64 | 197 |
| Msa1174400 | MtrunA17_Chr7g0252361 | 43.049 | 223 | 121 | 2 | 3 | 219 | 1 | 223 | 2.24e-57 | 186 |
| Msa1174400 | MtrunA17_Chr3g0107871 | 43.556 | 225 | 116 | 3 | 25 | 243 | 2 | 221 | 4.04e-57 | 185 |
| Msa1174400 | MtrunA17_Chr3g0100101 | 36.325 | 234 | 140 | 3 | 1 | 225 | 10 | 243 | 1.83e-42 | 148 |
| Msa1174400 | MtrunA17_Chr1g0208641 | 40.000 | 205 | 104 | 4 | 45 | 243 | 61 | 252 | 6.95e-39 | 138 |
| Msa1174400 | MtrunA17_Chr5g0444921 | 34.440 | 241 | 141 | 6 | 1 | 225 | 13 | 252 | 5.25e-38 | 136 |
| Msa1174400 | MtrunA17_Chr1g0155491 | 45.614 | 171 | 83 | 3 | 1 | 161 | 1 | 171 | 2.32e-33 | 119 |
| Msa1174400 | MtrunA17_Chr1g0155461 | 40.741 | 162 | 86 | 3 | 1 | 152 | 1 | 162 | 3.81e-32 | 116 |
| Msa1174400 | MtrunA17_Chr6g0455071 | 46.018 | 113 | 50 | 2 | 137 | 243 | 11 | 118 | 8.72e-31 | 110 |
| Msa1174400 | MtrunA17_Chr3g0099281 | 35.503 | 169 | 101 | 4 | 1 | 161 | 13 | 181 | 1.94e-27 | 103 |
| Msa1174400 | MtrunA17_Chr7g0252341 | 42.308 | 130 | 69 | 4 | 35 | 161 | 6 | 132 | 8.30e-26 | 98.6 |
| Msa1174400 | MtrunA17_Chr1g0155481 | 47.253 | 91 | 41 | 2 | 156 | 240 | 4 | 93 | 1.31e-19 | 82.4 |
| Msa1174400 | MtrunA17_Chr1g0155451 | 50.000 | 86 | 36 | 2 | 161 | 240 | 9 | 93 | 1.70e-19 | 84.0 |
| Msa1174400 | MtrunA17_Chr7g0252501 | 56.604 | 53 | 23 | 0 | 168 | 220 | 38 | 90 | 5.34e-12 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1174400 | AT5G66430.1 | 43.644 | 236 | 127 | 2 | 9 | 243 | 1 | 231 | 1.53e-67 | 212 |
| Msa1174400 | AT5G04380.1 | 45.763 | 236 | 122 | 2 | 9 | 243 | 34 | 264 | 1.05e-66 | 211 |
| Msa1174400 | AT5G04380.3 | 45.763 | 236 | 122 | 2 | 9 | 243 | 38 | 268 | 1.28e-66 | 211 |
| Msa1174400 | AT5G04370.1 | 46.414 | 237 | 120 | 3 | 9 | 243 | 41 | 272 | 3.81e-66 | 210 |
| Msa1174400 | AT5G04370.2 | 46.414 | 237 | 120 | 3 | 9 | 243 | 60 | 291 | 8.59e-66 | 209 |
| Msa1174400 | AT5G04370.3 | 46.414 | 237 | 120 | 3 | 9 | 243 | 46 | 277 | 1.02e-65 | 209 |
| Msa1174400 | AT3G21950.1 | 45.763 | 236 | 123 | 3 | 6 | 240 | 3 | 234 | 1.34e-65 | 208 |
| Msa1174400 | AT3G21950.2 | 45.763 | 236 | 123 | 3 | 6 | 240 | 3 | 234 | 3.56e-65 | 207 |
| Msa1174400 | AT5G38020.1 | 46.186 | 236 | 122 | 3 | 6 | 240 | 3 | 234 | 6.15e-65 | 206 |
| Msa1174400 | AT3G11480.1 | 43.644 | 236 | 129 | 2 | 9 | 243 | 31 | 263 | 1.81e-64 | 205 |
| Msa1174400 | AT2G14060.2 | 44.397 | 232 | 124 | 3 | 3 | 233 | 8 | 235 | 3.50e-64 | 201 |
| Msa1174400 | AT1G19640.1 | 46.743 | 261 | 120 | 5 | 1 | 243 | 1 | 260 | 9.13e-64 | 204 |
| Msa1174400 | AT2G14060.1 | 44.397 | 232 | 124 | 3 | 3 | 233 | 8 | 235 | 6.32e-63 | 201 |
| Msa1174400 | AT4G36470.1 | 44.980 | 249 | 119 | 5 | 2 | 237 | 5 | 248 | 6.03e-62 | 198 |
| Msa1174400 | AT5G04380.2 | 48.454 | 194 | 95 | 1 | 50 | 243 | 9 | 197 | 6.96e-60 | 192 |
| Msa1174400 | AT5G38020.2 | 48.148 | 189 | 94 | 2 | 52 | 240 | 11 | 195 | 1.79e-55 | 181 |
| Msa1174400 | AT1G68040.1 | 41.096 | 219 | 107 | 5 | 9 | 217 | 13 | 219 | 2.16e-46 | 158 |
| Msa1174400 | AT4G26420.3 | 37.004 | 227 | 123 | 7 | 3 | 218 | 7 | 224 | 1.38e-40 | 140 |
| Msa1174400 | AT5G55250.1 | 34.043 | 235 | 145 | 4 | 1 | 225 | 13 | 247 | 2.79e-40 | 142 |
| Msa1174400 | AT5G37970.1 | 42.035 | 226 | 104 | 7 | 5 | 214 | 6 | 220 | 3.20e-40 | 142 |
| Msa1174400 | AT3G44840.1 | 42.925 | 212 | 101 | 6 | 9 | 213 | 7 | 205 | 4.65e-40 | 141 |
| Msa1174400 | AT1G15125.2 | 39.450 | 218 | 111 | 7 | 9 | 217 | 1 | 206 | 4.76e-40 | 138 |
| Msa1174400 | AT4G26420.1 | 37.004 | 227 | 123 | 7 | 3 | 218 | 7 | 224 | 2.46e-39 | 140 |
| Msa1174400 | AT4G26420.2 | 37.104 | 221 | 119 | 7 | 9 | 218 | 1 | 212 | 2.57e-39 | 137 |
| Msa1174400 | AT1G15125.1 | 39.450 | 218 | 111 | 7 | 9 | 217 | 1 | 206 | 3.09e-39 | 139 |
| Msa1174400 | AT5G37990.1 | 41.150 | 226 | 106 | 8 | 5 | 214 | 6 | 220 | 1.18e-37 | 135 |
| Msa1174400 | AT1G66700.3 | 37.838 | 222 | 115 | 5 | 9 | 220 | 9 | 217 | 1.01e-36 | 130 |
| Msa1174400 | AT1G66700.1 | 37.838 | 222 | 115 | 5 | 9 | 220 | 9 | 217 | 5.17e-36 | 130 |
| Msa1174400 | AT3G44860.1 | 42.927 | 205 | 97 | 5 | 9 | 206 | 7 | 198 | 5.67e-36 | 130 |
| Msa1174400 | AT5G38100.2 | 39.545 | 220 | 105 | 8 | 9 | 213 | 10 | 216 | 7.97e-36 | 127 |
| Msa1174400 | AT5G38100.4 | 39.545 | 220 | 105 | 8 | 9 | 213 | 10 | 216 | 8.37e-36 | 127 |
| Msa1174400 | AT5G56300.1 | 36.123 | 227 | 124 | 6 | 3 | 218 | 18 | 234 | 1.41e-35 | 130 |
| Msa1174400 | AT3G44870.1 | 41.284 | 218 | 107 | 5 | 9 | 220 | 7 | 209 | 4.17e-35 | 129 |
| Msa1174400 | AT5G38100.1 | 39.545 | 220 | 105 | 8 | 9 | 213 | 10 | 216 | 7.96e-35 | 127 |
| Msa1174400 | AT5G38780.1 | 37.156 | 218 | 113 | 6 | 9 | 212 | 10 | 217 | 1.04e-34 | 127 |
| Msa1174400 | AT5G55250.2 | 37.079 | 178 | 104 | 3 | 56 | 225 | 32 | 209 | 1.47e-34 | 127 |
| Msa1174400 | AT1G66720.1 | 34.426 | 244 | 139 | 5 | 9 | 243 | 9 | 240 | 3.62e-34 | 125 |
| Msa1174400 | AT5G38100.3 | 42.857 | 175 | 75 | 7 | 51 | 213 | 32 | 193 | 8.52e-33 | 122 |
| Msa1174400 | AT5G38780.2 | 40.116 | 172 | 83 | 5 | 51 | 212 | 7 | 168 | 1.29e-31 | 118 |
| Msa1174400 | AT1G66690.1 | 35.922 | 206 | 109 | 5 | 9 | 204 | 9 | 201 | 1.50e-27 | 108 |
Find 45 sgRNAs with CRISPR-Local
Find 250 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTATGGCTTCATCTCTTAT+TGG | 0.171047 | 8_1:+5482860 | None:intergenic |
| AAATGAAATCAAAACTAAAA+TGG | 0.175532 | 8_1:-5482609 | Msa1174400:CDS |
| ATGGGTCCTTGTTACTTCTT+TGG | 0.197736 | 8_1:-5482590 | Msa1174400:CDS |
| TGTTACTTCTTTGGGGTTCC+TGG | 0.212711 | 8_1:-5482581 | Msa1174400:CDS |
| TAAAATATTGTTGCTACTAT+TGG | 0.215282 | 8_1:-5481979 | Msa1174400:CDS |
| TGGGTCCTTGTTACTTCTTT+GGG | 0.234467 | 8_1:-5482589 | Msa1174400:CDS |
| AGTCTTGCAATTGCAGATTT+AGG | 0.234507 | 8_1:-5482809 | Msa1174400:CDS |
| GCAGATTTAGGTTGTTCTTC+TGG | 0.263073 | 8_1:-5482797 | Msa1174400:CDS |
| TATAGGGAAATGCAGTTTCT+TGG | 0.287192 | 8_1:-5482889 | Msa1174400:intron |
| ATCTGCAATTGCAAGACTTC+TGG | 0.289580 | 8_1:+5482814 | None:intergenic |
| AAAATATTGTTGCTACTATT+GGG | 0.341372 | 8_1:-5481978 | Msa1174400:CDS |
| TCAATTTAAAAGAGACTTCT+CGG | 0.358277 | 8_1:-5482092 | Msa1174400:CDS |
| GAGATGAATGGTTCAATTGT+TGG | 0.392209 | 8_1:+5482720 | None:intergenic |
| GTTGGAGTAGAGGCTTGTTA+TGG | 0.407091 | 8_1:+5482844 | None:intergenic |
| ATTCCTCTTACAGCCTTCAT+TGG | 0.426219 | 8_1:-5482511 | Msa1174400:CDS |
| TGGACCAAACACTTTGTTTG+TGG | 0.427560 | 8_1:-5482777 | Msa1174400:CDS |
| AGCTGCTGTTCTTAATGGCA+TGG | 0.438077 | 8_1:-5481948 | None:intergenic |
| AATGAAATCAAAACTAAAAT+GGG | 0.439241 | 8_1:-5482608 | Msa1174400:CDS |
| TATGCTTTAACAACATTTGA+GGG | 0.450868 | 8_1:+5482121 | None:intergenic |
| ATGAAATGCAAACTTTGATC+AGG | 0.468189 | 8_1:+5482536 | None:intergenic |
| GATACCACAAACAAAGTGTT+TGG | 0.483715 | 8_1:+5482773 | None:intergenic |
| CAGCCTTCATTGGCTATCAA+AGG | 0.487208 | 8_1:-5482501 | Msa1174400:intron |
| ATCAGACATTATCATGGTTG+TGG | 0.487720 | 8_1:-5482753 | Msa1174400:CDS |
| GTATGCTTTAACAACATTTG+AGG | 0.517154 | 8_1:+5482120 | None:intergenic |
| TGGAAAGTGTGTTGGAGTAG+AGG | 0.518450 | 8_1:+5482834 | None:intergenic |
| GGGTCCTTGTTACTTCTTTG+GGG | 0.519835 | 8_1:-5482588 | Msa1174400:CDS |
| GGGCAGGTAGTGCACATGAA+TGG | 0.526022 | 8_1:-5483880 | Msa1174400:CDS |
| TAGCCAATGAAGGCTGTAAG+AGG | 0.535843 | 8_1:+5482508 | None:intergenic |
| CGTGCAGAGGAACTAGTTGA+AGG | 0.536965 | 8_1:-5482055 | Msa1174400:CDS |
| TAACCTTTGATAGCCAATGA+AGG | 0.548055 | 8_1:+5482498 | None:intergenic |
| TGTGGTATCAGACATTATCA+TGG | 0.553329 | 8_1:-5482759 | Msa1174400:CDS |
| TCTTGTACTCGGGAGATGAA+TGG | 0.553449 | 8_1:+5482708 | None:intergenic |
| GTGCAGAGGAACTAGTTGAA+GGG | 0.554125 | 8_1:-5482054 | Msa1174400:CDS |
| TCATGTGCACTACCTGCCCC+AGG | 0.561033 | 8_1:+5483884 | None:intergenic |
| TTATTGTTCTCTATACCCTC+CGG | 0.563075 | 8_1:+5482172 | None:intergenic |
| GTGCACATGAATGGAGGTGA+TGG | 0.587528 | 8_1:-5483871 | Msa1174400:CDS |
| TGCAGAGGAACTAGTTGAAG+GGG | 0.594526 | 8_1:-5482053 | Msa1174400:CDS |
| AAGACTTCTGGAAAGTGTGT+TGG | 0.600725 | 8_1:+5482826 | None:intergenic |
| GGGAATTATTAGGTTCCGGA+GGG | 0.604890 | 8_1:-5482187 | Msa1174400:intron |
| TGCATGGTTCTAACAATGAG+TGG | 0.606537 | 8_1:-5482028 | Msa1174400:CDS |
| GGGGAATTATTAGGTTCCGG+AGG | 0.634746 | 8_1:-5482188 | Msa1174400:intron |
| CAGGTAGTGCACATGAATGG+AGG | 0.640551 | 8_1:-5483877 | Msa1174400:CDS |
| GGAACCCCAAAGAAGTAACA+AGG | 0.641016 | 8_1:+5482584 | None:intergenic |
| ACTCTGTTATAGAAAGAACC+AGG | 0.668917 | 8_1:+5482563 | None:intergenic |
| GCAGAGGAACTAGTTGAAGG+GGG | 0.710839 | 8_1:-5482052 | Msa1174400:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTACGTATAATTTT+TGG | - | chr8_1:5482054-5482073 | Msa1174400:CDS | 10.0% |
| !!! | TAGTTTATTTTTTAAAACAA+TGG | + | chr8_1:5482514-5482533 | None:intergenic | 10.0% |
| !!! | ATTTTTTAAAATTTCTCAAA+AGG | - | chr8_1:5482554-5482573 | Msa1174400:CDS | 10.0% |
| !!! | TCATTTTAAACATTTTATTT+TGG | - | chr8_1:5482631-5482650 | Msa1174400:CDS | 10.0% |
| !! | AATTGATTAAATAATATCTA+AGG | + | chr8_1:5482735-5482754 | None:intergenic | 10.0% |
| !! | TAGATATTATTTAATCAATT+AGG | - | chr8_1:5482735-5482754 | Msa1174400:CDS | 10.0% |
| !!! | ATAAAAAAACATTTTTTCTT+TGG | + | chr8_1:5482768-5482787 | None:intergenic | 10.0% |
| !!! | ATGTAATGTTTTTTTTTTTT+TGG | + | chr8_1:5483597-5483616 | None:intergenic | 10.0% |
| !!! | TTGATTTTATTTGTTAATTA+TGG | - | chr8_1:5483629-5483648 | Msa1174400:intron | 10.0% |
| !!! | TGATTTTATTTGTTAATTAT+GGG | - | chr8_1:5483630-5483649 | Msa1174400:intron | 10.0% |
| !!! | ATTTTTTTACGTATAATTTT+TGG | - | chr8_1:5482054-5482073 | Msa1174400:CDS | 10.0% |
| !!! | TAGTTTATTTTTTAAAACAA+TGG | + | chr8_1:5482514-5482533 | None:intergenic | 10.0% |
| !!! | ATTTTTTAAAATTTCTCAAA+AGG | - | chr8_1:5482554-5482573 | Msa1174400:CDS | 10.0% |
| !!! | TCATTTTAAACATTTTATTT+TGG | - | chr8_1:5482631-5482650 | Msa1174400:CDS | 10.0% |
| !! | AATTGATTAAATAATATCTA+AGG | + | chr8_1:5482735-5482754 | None:intergenic | 10.0% |
| !! | TAGATATTATTTAATCAATT+AGG | - | chr8_1:5482735-5482754 | Msa1174400:CDS | 10.0% |
| !!! | ATAAAAAAACATTTTTTCTT+TGG | + | chr8_1:5482768-5482787 | None:intergenic | 10.0% |
| !!! | ATGTAATGTTTTTTTTTTTT+TGG | + | chr8_1:5483597-5483616 | None:intergenic | 10.0% |
| !!! | TTGATTTTATTTGTTAATTA+TGG | - | chr8_1:5483629-5483648 | Msa1174400:intron | 10.0% |
| !!! | TGATTTTATTTGTTAATTAT+GGG | - | chr8_1:5483630-5483649 | Msa1174400:intron | 10.0% |
| !!! | AATTAAAAAAACTTGTTTGA+AGG | + | chr8_1:5482880-5482899 | None:intergenic | 15.0% |
| !! | TTTCTTTATTATGTTGATAT+AGG | - | chr8_1:5482932-5482951 | Msa1174400:intron | 15.0% |
| !! | TTCTTTATTATGTTGATATA+GGG | - | chr8_1:5482933-5482952 | Msa1174400:intron | 15.0% |
| !! | ATTAAAAAATATCTTGTACT+CGG | + | chr8_1:5483144-5483163 | None:intergenic | 15.0% |
| !!! | ATATTTTTTAATGATGTTTC+AGG | - | chr8_1:5483152-5483171 | Msa1174400:intron | 15.0% |
| !! | AAATGAAATCAAAACTAAAA+TGG | - | chr8_1:5483229-5483248 | Msa1174400:intron | 15.0% |
| !! | AATGAAATCAAAACTAAAAT+GGG | - | chr8_1:5483230-5483249 | Msa1174400:intron | 15.0% |
| !!! | GATTTTATTTGTTAATTATG+GGG | - | chr8_1:5483631-5483650 | Msa1174400:intron | 15.0% |
| !!! | AATTAAAAAAACTTGTTTGA+AGG | + | chr8_1:5482880-5482899 | None:intergenic | 15.0% |
| !! | TTTCTTTATTATGTTGATAT+AGG | - | chr8_1:5482932-5482951 | Msa1174400:intron | 15.0% |
| !! | TTCTTTATTATGTTGATATA+GGG | - | chr8_1:5482933-5482952 | Msa1174400:intron | 15.0% |
| !! | ATTAAAAAATATCTTGTACT+CGG | + | chr8_1:5483144-5483163 | None:intergenic | 15.0% |
| !!! | ATATTTTTTAATGATGTTTC+AGG | - | chr8_1:5483152-5483171 | Msa1174400:intron | 15.0% |
| !! | AAATGAAATCAAAACTAAAA+TGG | - | chr8_1:5483229-5483248 | Msa1174400:intron | 15.0% |
| !! | AATGAAATCAAAACTAAAAT+GGG | - | chr8_1:5483230-5483249 | Msa1174400:intron | 15.0% |
| !!! | GATTTTATTTGTTAATTATG+GGG | - | chr8_1:5483631-5483650 | Msa1174400:intron | 15.0% |
| !! | TTTAAATTGAGATTGTCTAT+AGG | - | chr8_1:5482359-5482378 | Msa1174400:intron | 20.0% |
| !! | GTTCTTAATGATATTATTGT+GGG | + | chr8_1:5482431-5482450 | None:intergenic | 20.0% |
| !! | AGTTCTTAATGATATTATTG+TGG | + | chr8_1:5482432-5482451 | None:intergenic | 20.0% |
| !!! | TTTTTAAAAAGGCATATTCT+AGG | - | chr8_1:5482459-5482478 | Msa1174400:intron | 20.0% |
| !!! | CATATTTAACGGTTTTAAAA+CGG | - | chr8_1:5482486-5482505 | Msa1174400:intron | 20.0% |
| !!! | AATAACATTAACTACCTTTT+TGG | - | chr8_1:5482596-5482615 | Msa1174400:CDS | 20.0% |
| !! | TTAAAAAATATCTTGTACTC+GGG | + | chr8_1:5483143-5483162 | None:intergenic | 20.0% |
| !! | GAAACACAATATAAAATATG+AGG | + | chr8_1:5483375-5483394 | None:intergenic | 20.0% |
| !! | TACCAATTAAACTACATTTA+CGG | + | chr8_1:5483476-5483495 | None:intergenic | 20.0% |
| !! | TAAAATATTGTTGCTACTAT+TGG | - | chr8_1:5483859-5483878 | Msa1174400:CDS | 20.0% |
| !! | AAAATATTGTTGCTACTATT+GGG | - | chr8_1:5483860-5483879 | Msa1174400:CDS | 20.0% |
| !! | TTTAAATTGAGATTGTCTAT+AGG | - | chr8_1:5482359-5482378 | Msa1174400:intron | 20.0% |
| !! | GTTCTTAATGATATTATTGT+GGG | + | chr8_1:5482431-5482450 | None:intergenic | 20.0% |
| !! | AGTTCTTAATGATATTATTG+TGG | + | chr8_1:5482432-5482451 | None:intergenic | 20.0% |
| !!! | TTTTTAAAAAGGCATATTCT+AGG | - | chr8_1:5482459-5482478 | Msa1174400:intron | 20.0% |
| !!! | CATATTTAACGGTTTTAAAA+CGG | - | chr8_1:5482486-5482505 | Msa1174400:intron | 20.0% |
| !!! | AATAACATTAACTACCTTTT+TGG | - | chr8_1:5482596-5482615 | Msa1174400:CDS | 20.0% |
| !! | TTAAAAAATATCTTGTACTC+GGG | + | chr8_1:5483143-5483162 | None:intergenic | 20.0% |
| !! | GAAACACAATATAAAATATG+AGG | + | chr8_1:5483375-5483394 | None:intergenic | 20.0% |
| !! | TACCAATTAAACTACATTTA+CGG | + | chr8_1:5483476-5483495 | None:intergenic | 20.0% |
| !! | TAAAATATTGTTGCTACTAT+TGG | - | chr8_1:5483859-5483878 | Msa1174400:CDS | 20.0% |
| !! | AAAATATTGTTGCTACTATT+GGG | - | chr8_1:5483860-5483879 | Msa1174400:CDS | 20.0% |
| !!! | GTATAATTTTTGGAAGATGA+AGG | - | chr8_1:5482064-5482083 | Msa1174400:CDS | 25.0% |
| ! | AAGAACTATCTTTAATGGTA+TGG | + | chr8_1:5482099-5482118 | None:intergenic | 25.0% |
| ! | GACAAAAGAACTATCTTTAA+TGG | + | chr8_1:5482104-5482123 | None:intergenic | 25.0% |
| !! | TAAAGATAGTTCTTTTGTCA+TGG | - | chr8_1:5482105-5482124 | Msa1174400:CDS | 25.0% |
| !! | GGATATGAGAAATTTGATTT+GGG | - | chr8_1:5482278-5482297 | Msa1174400:intron | 25.0% |
| !!! | AGAAATTTGATTTGGGATTT+TGG | - | chr8_1:5482285-5482304 | Msa1174400:intron | 25.0% |
| !!! | GAAATTTGATTTGGGATTTT+GGG | - | chr8_1:5482286-5482305 | Msa1174400:intron | 25.0% |
| !!! | TTCTAGGATTGCATATTTAA+CGG | - | chr8_1:5482475-5482494 | Msa1174400:intron | 25.0% |
| ! | ACCAATTAAACTACATTTAC+GGG | + | chr8_1:5483475-5483494 | None:intergenic | 25.0% |
| ! | GTTAATTATGGGGAATTATT+AGG | - | chr8_1:5483641-5483660 | Msa1174400:intron | 25.0% |
| ! | TATGCTTTAACAACATTTGA+GGG | + | chr8_1:5483720-5483739 | None:intergenic | 25.0% |
| ! | TCAATTTAAAAGAGACTTCT+CGG | - | chr8_1:5483746-5483765 | Msa1174400:intron | 25.0% |
| !! | CAACAATATTTTATGTCACA+TGG | + | chr8_1:5483852-5483871 | None:intergenic | 25.0% |
| !!! | GTATAATTTTTGGAAGATGA+AGG | - | chr8_1:5482064-5482083 | Msa1174400:CDS | 25.0% |
| ! | AAGAACTATCTTTAATGGTA+TGG | + | chr8_1:5482099-5482118 | None:intergenic | 25.0% |
| ! | GACAAAAGAACTATCTTTAA+TGG | + | chr8_1:5482104-5482123 | None:intergenic | 25.0% |
| !! | TAAAGATAGTTCTTTTGTCA+TGG | - | chr8_1:5482105-5482124 | Msa1174400:CDS | 25.0% |
| !! | GGATATGAGAAATTTGATTT+GGG | - | chr8_1:5482278-5482297 | Msa1174400:intron | 25.0% |
| !!! | AGAAATTTGATTTGGGATTT+TGG | - | chr8_1:5482285-5482304 | Msa1174400:intron | 25.0% |
| !!! | GAAATTTGATTTGGGATTTT+GGG | - | chr8_1:5482286-5482305 | Msa1174400:intron | 25.0% |
| !!! | TTCTAGGATTGCATATTTAA+CGG | - | chr8_1:5482475-5482494 | Msa1174400:intron | 25.0% |
| ! | ACCAATTAAACTACATTTAC+GGG | + | chr8_1:5483475-5483494 | None:intergenic | 25.0% |
| ! | GTTAATTATGGGGAATTATT+AGG | - | chr8_1:5483641-5483660 | Msa1174400:intron | 25.0% |
| ! | TATGCTTTAACAACATTTGA+GGG | + | chr8_1:5483720-5483739 | None:intergenic | 25.0% |
| ! | TCAATTTAAAAGAGACTTCT+CGG | - | chr8_1:5483746-5483765 | Msa1174400:intron | 25.0% |
| !! | CAACAATATTTTATGTCACA+TGG | + | chr8_1:5483852-5483871 | None:intergenic | 25.0% |
| TGCAAAAAACTCATTTCATC+AGG | - | chr8_1:5482002-5482021 | Msa1174400:CDS | 30.0% | |
| ! | CTTTTCATAACCAGAATAGA+TGG | + | chr8_1:5482141-5482160 | None:intergenic | 30.0% |
| GGGATATGAGAAATTTGATT+TGG | - | chr8_1:5482277-5482296 | Msa1174400:intron | 30.0% | |
| ! | GATTTTATGAGCAACCAAAA+AGG | + | chr8_1:5482613-5482632 | None:intergenic | 30.0% |
| !! | TGATTTTAAGAGACAGAGAA+TGG | - | chr8_1:5482821-5482840 | Msa1174400:CDS | 30.0% |
| ATGAAATGCAAACTTTGATC+AGG | + | chr8_1:5483305-5483324 | None:intergenic | 30.0% | |
| TCCCGTAAATGTAGTTTAAT+TGG | - | chr8_1:5483471-5483490 | Msa1174400:intron | 30.0% | |
| TTCCAGGGATAATTTATACA+GGG | - | chr8_1:5483498-5483517 | Msa1174400:intron | 30.0% | |
| AGATTCACACATATTATGTG+TGG | + | chr8_1:5483556-5483575 | None:intergenic | 30.0% | |
| GTATGCTTTAACAACATTTG+AGG | + | chr8_1:5483721-5483740 | None:intergenic | 30.0% | |
| TGCAAAAAACTCATTTCATC+AGG | - | chr8_1:5482002-5482021 | Msa1174400:CDS | 30.0% | |
| ! | CTTTTCATAACCAGAATAGA+TGG | + | chr8_1:5482141-5482160 | None:intergenic | 30.0% |
| GGGATATGAGAAATTTGATT+TGG | - | chr8_1:5482277-5482296 | Msa1174400:intron | 30.0% | |
| ! | GATTTTATGAGCAACCAAAA+AGG | + | chr8_1:5482613-5482632 | None:intergenic | 30.0% |
| !! | TGATTTTAAGAGACAGAGAA+TGG | - | chr8_1:5482821-5482840 | Msa1174400:CDS | 30.0% |
| ATGAAATGCAAACTTTGATC+AGG | + | chr8_1:5483305-5483324 | None:intergenic | 30.0% | |
| TCCCGTAAATGTAGTTTAAT+TGG | - | chr8_1:5483471-5483490 | Msa1174400:intron | 30.0% | |
| TTCCAGGGATAATTTATACA+GGG | - | chr8_1:5483498-5483517 | Msa1174400:intron | 30.0% | |
| AGATTCACACATATTATGTG+TGG | + | chr8_1:5483556-5483575 | None:intergenic | 30.0% | |
| GTATGCTTTAACAACATTTG+AGG | + | chr8_1:5483721-5483740 | None:intergenic | 30.0% | |
| GGCGAATTTCTCGAATTTAA+AGG | + | chr8_1:5482175-5482194 | None:intergenic | 35.0% | |
| !! | TTTTGAACACTAGTTTCTCG+AGG | + | chr8_1:5482241-5482260 | None:intergenic | 35.0% |
| TATAGGGAAATGCAGTTTCT+TGG | - | chr8_1:5482949-5482968 | Msa1174400:intron | 35.0% | |
| GTTATGGCTTCATCTCTTAT+TGG | + | chr8_1:5482981-5483000 | None:intergenic | 35.0% | |
| AGTCTTGCAATTGCAGATTT+AGG | - | chr8_1:5483029-5483048 | Msa1174400:intron | 35.0% | |
| ! | GATACCACAAACAAAGTGTT+TGG | + | chr8_1:5483068-5483087 | None:intergenic | 35.0% |
| TGTGGTATCAGACATTATCA+TGG | - | chr8_1:5483079-5483098 | Msa1174400:intron | 35.0% | |
| ATCAGACATTATCATGGTTG+TGG | - | chr8_1:5483085-5483104 | Msa1174400:intron | 35.0% | |
| GAGATGAATGGTTCAATTGT+TGG | + | chr8_1:5483121-5483140 | None:intergenic | 35.0% | |
| ACTCTGTTATAGAAAGAACC+AGG | + | chr8_1:5483278-5483297 | None:intergenic | 35.0% | |
| ! | TAACCTTTGATAGCCAATGA+AGG | + | chr8_1:5483343-5483362 | None:intergenic | 35.0% |
| ! | TAGTTTAATTGGTAGCTTCC+AGG | - | chr8_1:5483482-5483501 | Msa1174400:intron | 35.0% |
| ! | AGTTTAATTGGTAGCTTCCA+GGG | - | chr8_1:5483483-5483502 | Msa1174400:intron | 35.0% |
| CTTCCAGGGATAATTTATAC+AGG | - | chr8_1:5483497-5483516 | Msa1174400:intron | 35.0% | |
| TCCAGGGATAATTTATACAG+GGG | - | chr8_1:5483499-5483518 | Msa1174400:intron | 35.0% | |
| ATATTATGTGTGGAGAAGTG+GGG | + | chr8_1:5483546-5483565 | None:intergenic | 35.0% | |
| CATATTATGTGTGGAGAAGT+GGG | + | chr8_1:5483547-5483566 | None:intergenic | 35.0% | |
| ACATATTATGTGTGGAGAAG+TGG | + | chr8_1:5483548-5483567 | None:intergenic | 35.0% | |
| TATGGGGAATTATTAGGTTC+CGG | - | chr8_1:5483647-5483666 | Msa1174400:intron | 35.0% | |
| TTATTGTTCTCTATACCCTC+CGG | + | chr8_1:5483669-5483688 | None:intergenic | 35.0% | |
| !! | CTTTTAGCTGCTGTTCTTAA+TGG | - | chr8_1:5483885-5483904 | Msa1174400:CDS | 35.0% |
| GGCGAATTTCTCGAATTTAA+AGG | + | chr8_1:5482175-5482194 | None:intergenic | 35.0% | |
| !! | TTTTGAACACTAGTTTCTCG+AGG | + | chr8_1:5482241-5482260 | None:intergenic | 35.0% |
| TATAGGGAAATGCAGTTTCT+TGG | - | chr8_1:5482949-5482968 | Msa1174400:intron | 35.0% | |
| GTTATGGCTTCATCTCTTAT+TGG | + | chr8_1:5482981-5483000 | None:intergenic | 35.0% | |
| AGTCTTGCAATTGCAGATTT+AGG | - | chr8_1:5483029-5483048 | Msa1174400:intron | 35.0% | |
| ! | GATACCACAAACAAAGTGTT+TGG | + | chr8_1:5483068-5483087 | None:intergenic | 35.0% |
| TGTGGTATCAGACATTATCA+TGG | - | chr8_1:5483079-5483098 | Msa1174400:intron | 35.0% | |
| ATCAGACATTATCATGGTTG+TGG | - | chr8_1:5483085-5483104 | Msa1174400:intron | 35.0% | |
| GAGATGAATGGTTCAATTGT+TGG | + | chr8_1:5483121-5483140 | None:intergenic | 35.0% | |
| ACTCTGTTATAGAAAGAACC+AGG | + | chr8_1:5483278-5483297 | None:intergenic | 35.0% | |
| ! | TAACCTTTGATAGCCAATGA+AGG | + | chr8_1:5483343-5483362 | None:intergenic | 35.0% |
| ! | TAGTTTAATTGGTAGCTTCC+AGG | - | chr8_1:5483482-5483501 | Msa1174400:intron | 35.0% |
| ! | AGTTTAATTGGTAGCTTCCA+GGG | - | chr8_1:5483483-5483502 | Msa1174400:intron | 35.0% |
| CTTCCAGGGATAATTTATAC+AGG | - | chr8_1:5483497-5483516 | Msa1174400:intron | 35.0% | |
| TCCAGGGATAATTTATACAG+GGG | - | chr8_1:5483499-5483518 | Msa1174400:intron | 35.0% | |
| ATATTATGTGTGGAGAAGTG+GGG | + | chr8_1:5483546-5483565 | None:intergenic | 35.0% | |
| CATATTATGTGTGGAGAAGT+GGG | + | chr8_1:5483547-5483566 | None:intergenic | 35.0% | |
| ACATATTATGTGTGGAGAAG+TGG | + | chr8_1:5483548-5483567 | None:intergenic | 35.0% | |
| TATGGGGAATTATTAGGTTC+CGG | - | chr8_1:5483647-5483666 | Msa1174400:intron | 35.0% | |
| TTATTGTTCTCTATACCCTC+CGG | + | chr8_1:5483669-5483688 | None:intergenic | 35.0% | |
| !! | CTTTTAGCTGCTGTTCTTAA+TGG | - | chr8_1:5483885-5483904 | Msa1174400:CDS | 35.0% |
| CAGGTATGTGTGTGTGTATA+AGG | - | chr8_1:5482021-5482040 | Msa1174400:CDS | 40.0% | |
| ATGCATTGAGCCATCTATTC+TGG | - | chr8_1:5482128-5482147 | Msa1174400:CDS | 40.0% | |
| ! | AAGACTTCTGGAAAGTGTGT+TGG | + | chr8_1:5483015-5483034 | None:intergenic | 40.0% |
| ATCTGCAATTGCAAGACTTC+TGG | + | chr8_1:5483027-5483046 | None:intergenic | 40.0% | |
| !! | GCAGATTTAGGTTGTTCTTC+TGG | - | chr8_1:5483041-5483060 | Msa1174400:intron | 40.0% |
| ! | TGGACCAAACACTTTGTTTG+TGG | - | chr8_1:5483061-5483080 | Msa1174400:intron | 40.0% |
| ! | ATGGGTCCTTGTTACTTCTT+TGG | - | chr8_1:5483248-5483267 | Msa1174400:intron | 40.0% |
| ! | TGGGTCCTTGTTACTTCTTT+GGG | - | chr8_1:5483249-5483268 | Msa1174400:intron | 40.0% |
| ATTCCTCTTACAGCCTTCAT+TGG | - | chr8_1:5483327-5483346 | Msa1174400:intron | 40.0% | |
| GATAATTTATACAGGGGCCA+GGG | - | chr8_1:5483505-5483524 | Msa1174400:intron | 40.0% | |
| TATGTGTGAATCTAGCCACT+AGG | - | chr8_1:5483563-5483582 | Msa1174400:intron | 40.0% | |
| !! | TTTTTGGTCATGTAGCCTAG+TGG | + | chr8_1:5483581-5483600 | None:intergenic | 40.0% |
| !! | TTTTCTCAAGTATCGTGCAG+AGG | - | chr8_1:5483770-5483789 | Msa1174400:intron | 40.0% |
| !! | TGCATGGTTCTAACAATGAG+TGG | - | chr8_1:5483810-5483829 | Msa1174400:intron | 40.0% |
| CAGGTATGTGTGTGTGTATA+AGG | - | chr8_1:5482021-5482040 | Msa1174400:CDS | 40.0% | |
| ATGCATTGAGCCATCTATTC+TGG | - | chr8_1:5482128-5482147 | Msa1174400:CDS | 40.0% | |
| ! | AAGACTTCTGGAAAGTGTGT+TGG | + | chr8_1:5483015-5483034 | None:intergenic | 40.0% |
| ATCTGCAATTGCAAGACTTC+TGG | + | chr8_1:5483027-5483046 | None:intergenic | 40.0% | |
| !! | GCAGATTTAGGTTGTTCTTC+TGG | - | chr8_1:5483041-5483060 | Msa1174400:intron | 40.0% |
| ! | TGGACCAAACACTTTGTTTG+TGG | - | chr8_1:5483061-5483080 | Msa1174400:intron | 40.0% |
| ! | ATGGGTCCTTGTTACTTCTT+TGG | - | chr8_1:5483248-5483267 | Msa1174400:intron | 40.0% |
| ! | TGGGTCCTTGTTACTTCTTT+GGG | - | chr8_1:5483249-5483268 | Msa1174400:intron | 40.0% |
| ATTCCTCTTACAGCCTTCAT+TGG | - | chr8_1:5483327-5483346 | Msa1174400:intron | 40.0% | |
| GATAATTTATACAGGGGCCA+GGG | - | chr8_1:5483505-5483524 | Msa1174400:intron | 40.0% | |
| TATGTGTGAATCTAGCCACT+AGG | - | chr8_1:5483563-5483582 | Msa1174400:intron | 40.0% | |
| !! | TTTTTGGTCATGTAGCCTAG+TGG | + | chr8_1:5483581-5483600 | None:intergenic | 40.0% |
| !! | TTTTCTCAAGTATCGTGCAG+AGG | - | chr8_1:5483770-5483789 | Msa1174400:intron | 40.0% |
| !! | TGCATGGTTCTAACAATGAG+TGG | - | chr8_1:5483810-5483829 | Msa1174400:intron | 40.0% |
| AAAACCCGACACTGAGAGAA+GGG | - | chr8_1:5482257-5482276 | Msa1174400:intron | 45.0% | |
| ATATCCCTTCTCTCAGTGTC+GGG | + | chr8_1:5482264-5482283 | None:intergenic | 45.0% | |
| CATATCCCTTCTCTCAGTGT+CGG | + | chr8_1:5482265-5482284 | None:intergenic | 45.0% | |
| CTATAGGCTATAGCATCTGC+TGG | - | chr8_1:5482375-5482394 | Msa1174400:intron | 45.0% | |
| !! | GTTGGAGTAGAGGCTTGTTA+TGG | + | chr8_1:5482997-5483016 | None:intergenic | 45.0% |
| ! | TGGAAAGTGTGTTGGAGTAG+AGG | + | chr8_1:5483007-5483026 | None:intergenic | 45.0% |
| TCTTGTACTCGGGAGATGAA+TGG | + | chr8_1:5483133-5483152 | None:intergenic | 45.0% | |
| ! | GGGTCCTTGTTACTTCTTTG+GGG | - | chr8_1:5483250-5483269 | Msa1174400:intron | 45.0% |
| GGAACCCCAAAGAAGTAACA+AGG | + | chr8_1:5483257-5483276 | None:intergenic | 45.0% | |
| !! | TGTTACTTCTTTGGGGTTCC+TGG | - | chr8_1:5483257-5483276 | Msa1174400:intron | 45.0% |
| TAGCCAATGAAGGCTGTAAG+AGG | + | chr8_1:5483333-5483352 | None:intergenic | 45.0% | |
| ! | CAGCCTTCATTGGCTATCAA+AGG | - | chr8_1:5483337-5483356 | Msa1174400:intron | 45.0% |
| GCCCCTGTATAAATTATCCC+TGG | + | chr8_1:5483503-5483522 | None:intergenic | 45.0% | |
| GGATAATTTATACAGGGGCC+AGG | - | chr8_1:5483504-5483523 | Msa1174400:intron | 45.0% | |
| GGGAATTATTAGGTTCCGGA+GGG | - | chr8_1:5483651-5483670 | Msa1174400:intron | 45.0% | |
| GTGCAGAGGAACTAGTTGAA+GGG | - | chr8_1:5483784-5483803 | Msa1174400:intron | 45.0% | |
| TGCAGAGGAACTAGTTGAAG+GGG | - | chr8_1:5483785-5483804 | Msa1174400:intron | 45.0% | |
| AAAACCCGACACTGAGAGAA+GGG | - | chr8_1:5482257-5482276 | Msa1174400:intron | 45.0% | |
| ATATCCCTTCTCTCAGTGTC+GGG | + | chr8_1:5482264-5482283 | None:intergenic | 45.0% | |
| CATATCCCTTCTCTCAGTGT+CGG | + | chr8_1:5482265-5482284 | None:intergenic | 45.0% | |
| CTATAGGCTATAGCATCTGC+TGG | - | chr8_1:5482375-5482394 | Msa1174400:intron | 45.0% | |
| !! | GTTGGAGTAGAGGCTTGTTA+TGG | + | chr8_1:5482997-5483016 | None:intergenic | 45.0% |
| ! | TGGAAAGTGTGTTGGAGTAG+AGG | + | chr8_1:5483007-5483026 | None:intergenic | 45.0% |
| TCTTGTACTCGGGAGATGAA+TGG | + | chr8_1:5483133-5483152 | None:intergenic | 45.0% | |
| ! | GGGTCCTTGTTACTTCTTTG+GGG | - | chr8_1:5483250-5483269 | Msa1174400:intron | 45.0% |
| GGAACCCCAAAGAAGTAACA+AGG | + | chr8_1:5483257-5483276 | None:intergenic | 45.0% | |
| !! | TGTTACTTCTTTGGGGTTCC+TGG | - | chr8_1:5483257-5483276 | Msa1174400:intron | 45.0% |
| TAGCCAATGAAGGCTGTAAG+AGG | + | chr8_1:5483333-5483352 | None:intergenic | 45.0% | |
| ! | CAGCCTTCATTGGCTATCAA+AGG | - | chr8_1:5483337-5483356 | Msa1174400:intron | 45.0% |
| GCCCCTGTATAAATTATCCC+TGG | + | chr8_1:5483503-5483522 | None:intergenic | 45.0% | |
| GGATAATTTATACAGGGGCC+AGG | - | chr8_1:5483504-5483523 | Msa1174400:intron | 45.0% | |
| GGGAATTATTAGGTTCCGGA+GGG | - | chr8_1:5483651-5483670 | Msa1174400:intron | 45.0% | |
| GTGCAGAGGAACTAGTTGAA+GGG | - | chr8_1:5483784-5483803 | Msa1174400:intron | 45.0% | |
| TGCAGAGGAACTAGTTGAAG+GGG | - | chr8_1:5483785-5483804 | Msa1174400:intron | 45.0% | |
| !!! | AACTTTTTTATTTTTTAAAA+AGG | - | chr8_1:5482448-5482467 | Msa1174400:intron | 5.0% |
| !!! | AACTTTTTTATTTTTTAAAA+AGG | - | chr8_1:5482448-5482467 | Msa1174400:intron | 5.0% |
| CAGGTAGTGCACATGAATGG+AGG | - | chr8_1:5481961-5481980 | Msa1174400:CDS | 50.0% | |
| GTGCACATGAATGGAGGTGA+TGG | - | chr8_1:5481967-5481986 | Msa1174400:CDS | 50.0% | |
| TCTCAACCAAGTGACCTCTC+GGG | + | chr8_1:5482204-5482223 | None:intergenic | 50.0% | |
| CTCTCAACCAAGTGACCTCT+CGG | + | chr8_1:5482205-5482224 | None:intergenic | 50.0% | |
| CAAAACCCGACACTGAGAGA+AGG | - | chr8_1:5482256-5482275 | Msa1174400:intron | 50.0% | |
| GGGGAATTATTAGGTTCCGG+AGG | - | chr8_1:5483650-5483669 | Msa1174400:intron | 50.0% | |
| CGTGCAGAGGAACTAGTTGA+AGG | - | chr8_1:5483783-5483802 | Msa1174400:intron | 50.0% | |
| GCAGAGGAACTAGTTGAAGG+GGG | - | chr8_1:5483786-5483805 | Msa1174400:intron | 50.0% | |
| ACTAGTTGAAGGGGGTTGCA+TGG | - | chr8_1:5483794-5483813 | Msa1174400:intron | 50.0% | |
| CAGGTAGTGCACATGAATGG+AGG | - | chr8_1:5481961-5481980 | Msa1174400:CDS | 50.0% | |
| GTGCACATGAATGGAGGTGA+TGG | - | chr8_1:5481967-5481986 | Msa1174400:CDS | 50.0% | |
| TCTCAACCAAGTGACCTCTC+GGG | + | chr8_1:5482204-5482223 | None:intergenic | 50.0% | |
| CTCTCAACCAAGTGACCTCT+CGG | + | chr8_1:5482205-5482224 | None:intergenic | 50.0% | |
| CAAAACCCGACACTGAGAGA+AGG | - | chr8_1:5482256-5482275 | Msa1174400:intron | 50.0% | |
| GGGGAATTATTAGGTTCCGG+AGG | - | chr8_1:5483650-5483669 | Msa1174400:intron | 50.0% | |
| CGTGCAGAGGAACTAGTTGA+AGG | - | chr8_1:5483783-5483802 | Msa1174400:intron | 50.0% | |
| GCAGAGGAACTAGTTGAAGG+GGG | - | chr8_1:5483786-5483805 | Msa1174400:intron | 50.0% | |
| ACTAGTTGAAGGGGGTTGCA+TGG | - | chr8_1:5483794-5483813 | Msa1174400:intron | 50.0% | |
| GGGCAGGTAGTGCACATGAA+TGG | - | chr8_1:5481958-5481977 | Msa1174400:CDS | 55.0% | |
| AAGTGACCTCTCGGGAGACT+GGG | + | chr8_1:5482196-5482215 | None:intergenic | 55.0% | |
| TGTGGAGAAGTGGGGAATCC+GGG | + | chr8_1:5483538-5483557 | None:intergenic | 55.0% | |
| GTGTGGAGAAGTGGGGAATC+CGG | + | chr8_1:5483539-5483558 | None:intergenic | 55.0% | |
| GGGCAGGTAGTGCACATGAA+TGG | - | chr8_1:5481958-5481977 | Msa1174400:CDS | 55.0% | |
| AAGTGACCTCTCGGGAGACT+GGG | + | chr8_1:5482196-5482215 | None:intergenic | 55.0% | |
| TGTGGAGAAGTGGGGAATCC+GGG | + | chr8_1:5483538-5483557 | None:intergenic | 55.0% | |
| GTGTGGAGAAGTGGGGAATC+CGG | + | chr8_1:5483539-5483558 | None:intergenic | 55.0% | |
| TCATGTGCACTACCTGCCCC+AGG | + | chr8_1:5481957-5481976 | None:intergenic | 60.0% | |
| AATTCGCCCAGTCTCCCGAG+AGG | - | chr8_1:5482187-5482206 | Msa1174400:intron | 60.0% | |
| CAAGTGACCTCTCGGGAGAC+TGG | + | chr8_1:5482197-5482216 | None:intergenic | 60.0% | |
| CAGTCTCCCGAGAGGTCACT+TGG | - | chr8_1:5482195-5482214 | Msa1174400:intron | 60.0% | |
| GTGGAGAAGTGGGGAATCCG+GGG | + | chr8_1:5483537-5483556 | None:intergenic | 60.0% | |
| TCATGTGCACTACCTGCCCC+AGG | + | chr8_1:5481957-5481976 | None:intergenic | 60.0% | |
| AATTCGCCCAGTCTCCCGAG+AGG | - | chr8_1:5482187-5482206 | Msa1174400:intron | 60.0% | |
| CAAGTGACCTCTCGGGAGAC+TGG | + | chr8_1:5482197-5482216 | None:intergenic | 60.0% | |
| CAGTCTCCCGAGAGGTCACT+TGG | - | chr8_1:5482195-5482214 | Msa1174400:intron | 60.0% | |
| GTGGAGAAGTGGGGAATCCG+GGG | + | chr8_1:5483537-5483556 | None:intergenic | 60.0% | |
| GGAATCCGGGGTTCGAACCC+TGG | + | chr8_1:5483525-5483544 | None:intergenic | 65.0% | |
| GGAATCCGGGGTTCGAACCC+TGG | + | chr8_1:5483525-5483544 | None:intergenic | 65.0% | |
| AGGGGCCAGGGTTCGAACCC+CGG | - | chr8_1:5483517-5483536 | Msa1174400:intron | 70.0% | |
| AGGGGCCAGGGTTCGAACCC+CGG | - | chr8_1:5483517-5483536 | Msa1174400:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 5481949 | 5483911 | 5481949 | ID=Msa1174400;Name=Msa1174400 |
| chr8_1 | mRNA | 5481949 | 5483911 | 5481949 | ID=Msa1174400-mRNA-1;Parent=Msa1174400;Name=Msa1174400-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0|0|1|1|1|3|0|243 |
| chr8_1 | exon | 5483837 | 5483911 | 5483837 | ID=Msa1174400-mRNA-1:exon:1813;Parent=Msa1174400-mRNA-1 |
| chr8_1 | exon | 5482502 | 5482906 | 5482502 | ID=Msa1174400-mRNA-1:exon:1812;Parent=Msa1174400-mRNA-1 |
| chr8_1 | exon | 5481949 | 5482197 | 5481949 | ID=Msa1174400-mRNA-1:exon:1811;Parent=Msa1174400-mRNA-1 |
| chr8_1 | CDS | 5483837 | 5483911 | 5483837 | ID=Msa1174400-mRNA-1:cds;Parent=Msa1174400-mRNA-1 |
| chr8_1 | CDS | 5482502 | 5482906 | 5482502 | ID=Msa1174400-mRNA-1:cds;Parent=Msa1174400-mRNA-1 |
| chr8_1 | CDS | 5481949 | 5482197 | 5481949 | ID=Msa1174400-mRNA-1:cds;Parent=Msa1174400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
