AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1175490

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1175490 MtrunA17_Chr8g0345671 84.615 403 39 3 1 383 1 400 0.0 671
Msa1175490 MtrunA17_Chr8g0345691 62.884 423 94 6 6 381 13 419 5.64e-172 486
Msa1175490 MtrunA17_Chr8g0345711 67.164 134 37 1 1 127 1 134 7.03e-60 191
Msa1175490 MtrunA17_Chr8g0345731 69.531 128 32 2 5 127 24 149 2.45e-59 190
Msa1175490 MtrunA17_Chr8g0345721 58.385 161 33 2 1 127 26 186 1.93e-56 184
Msa1175490 MtrunA17_Chr8g0345741 71.429 112 32 0 16 127 2 113 2.80e-53 174
Msa1175490 MtrunA17_Chr5g0428991 36.223 323 149 11 3 292 23 321 1.67e-46 168
Msa1175490 MtrunA17_Chr3g0128111 50.296 169 57 6 8 156 45 206 1.26e-45 157
Msa1175490 MtrunA17_Chr3g0128151 51.235 162 56 5 3 144 20 178 1.72e-45 164
Msa1175490 MtrunA17_Chr8g0345701 55.714 140 46 4 2 127 4 141 4.39e-43 148
Msa1175490 MtrunA17_Chr5g0400461 45.455 165 67 4 4 146 5 168 4.50e-38 139
Msa1175490 MtrunA17_Chr6g0481091 48.966 145 66 4 4 147 5 142 8.94e-38 136
Msa1175490 MtrunA17_Chr2g0309891 53.600 125 54 3 4 127 5 126 2.37e-37 138
Msa1175490 MtrunA17_Chr3g0109821 42.077 183 82 4 4 165 5 184 4.16e-37 142
Msa1175490 MtrunA17_Chr5g0433781 54.400 125 53 3 4 127 5 126 1.50e-36 140
Msa1175490 MtrunA17_Chr4g0054791 42.021 188 85 5 4 170 5 189 4.44e-36 134
Msa1175490 MtrunA17_Chr2g0318101 46.053 152 72 5 5 155 15 157 2.96e-35 132
Msa1175490 MtrunA17_Chr1g0197361 46.358 151 60 3 8 139 11 159 1.08e-34 134
Msa1175490 MtrunA17_Chr7g0252971 48.855 131 56 4 5 127 8 135 2.41e-34 129
Msa1175490 MtrunA17_Chr4g0047841 50.806 124 57 3 5 127 15 135 3.51e-33 126
Msa1175490 MtrunA17_Chr3g0130731 47.020 151 71 5 5 152 7 151 1.39e-32 124
Msa1175490 MtrunA17_Chr2g0326361 48.800 125 60 3 4 127 13 134 1.73e-32 124
Msa1175490 MtrunA17_Chr8g0361731 49.587 121 57 3 8 127 17 134 6.42e-32 124
Msa1175490 MtrunA17_Chr2g0316971 52.419 124 55 3 5 127 23 143 8.25e-32 124
Msa1175490 MtrunA17_Chr3g0091921 52.419 124 53 5 5 127 16 134 1.06e-31 121
Msa1175490 MtrunA17_Chr4g0060931 50.806 124 55 5 5 127 17 135 2.04e-31 122
Msa1175490 MtrunA17_Chr8g0364791 46.281 121 61 3 8 127 9 126 2.15e-31 124
Msa1175490 MtrunA17_Chr3g0130101 48.760 121 58 3 8 127 10 127 3.51e-31 121
Msa1175490 MtrunA17_Chr7g0217721 54.032 124 51 5 5 127 19 137 3.90e-31 121
Msa1175490 MtrunA17_Chr8g0384721 49.194 124 56 4 5 127 7 124 5.09e-31 119
Msa1175490 MtrunA17_Chr8g0385991 48.387 124 58 3 5 127 14 132 5.26e-31 117
Msa1175490 MtrunA17_Chr2g0318081 35.391 243 123 10 4 226 15 243 6.37e-31 120
Msa1175490 MtrunA17_Chr4g0042561 48.819 127 59 4 2 127 6 127 6.73e-31 119
Msa1175490 MtrunA17_Chr7g0217711 52.419 124 53 5 5 127 19 137 8.43e-31 115
Msa1175490 MtrunA17_Chr3g0124761 50.000 124 55 4 5 127 7 124 9.16e-31 119
Msa1175490 MtrunA17_Chr6g0453451 46.939 147 64 5 5 142 20 161 1.30e-30 119
Msa1175490 MtrunA17_Chr4g0026141 47.727 132 63 4 1 128 1 130 1.43e-30 117
Msa1175490 MtrunA17_Chr7g0214071 40.606 165 74 4 5 151 15 173 1.96e-30 117
Msa1175490 MtrunA17_Chr1g0201021 52.066 121 54 3 8 127 22 139 2.69e-30 122
Msa1175490 MtrunA17_Chr6g0484441 48.438 128 60 4 1 127 1 123 3.37e-30 118
Msa1175490 MtrunA17_Chr3g0092671 52.066 121 55 2 8 127 8 126 3.70e-30 121
Msa1175490 MtrunA17_Chr5g0398971 48.387 124 60 4 6 127 8 129 4.33e-30 118
Msa1175490 MtrunA17_Chr7g0253011 40.212 189 98 7 2 187 14 190 6.15e-30 118
Msa1175490 MtrunA17_Chr5g0417001 47.107 121 60 3 8 127 17 134 6.27e-30 119
Msa1175490 MtrunA17_Chr6g0453131 49.587 121 56 4 8 127 18 134 7.51e-30 118
Msa1175490 MtrunA17_Chr1g0147421 47.200 125 63 2 4 127 26 148 8.87e-30 117
Msa1175490 MtrunA17_Chr6g0461661 45.968 124 63 3 5 127 18 138 9.08e-30 118
Msa1175490 MtrunA17_Chr3g0139331 43.506 154 66 5 4 139 10 160 1.04e-29 117
Msa1175490 MtrunA17_Chr1g0197351 51.200 125 57 3 4 127 41 162 1.13e-29 119
Msa1175490 MtrunA17_Chr2g0321741 41.667 156 74 5 26 168 13 164 1.28e-29 117
Msa1175490 MtrunA17_Chr4g0076731 48.780 123 54 5 8 127 57 173 1.59e-29 118
Msa1175490 MtrunA17_Chr4g0018391 48.387 124 59 4 6 127 8 128 1.62e-29 117
Msa1175490 MtrunA17_Chr8g0359921 42.763 152 79 5 4 152 13 159 2.52e-29 115
Msa1175490 MtrunA17_Chr1g0183741 37.838 185 101 7 4 183 9 184 2.60e-29 114
Msa1175490 MtrunA17_Chr7g0261411 40.667 150 81 4 4 152 9 151 4.14e-29 114
Msa1175490 MtrunA17_Chr7g0263931 45.161 124 64 3 5 127 11 131 6.27e-29 114
Msa1175490 MtrunA17_Chr8g0384201 45.455 121 62 3 8 127 9 126 1.12e-28 116
Msa1175490 MtrunA17_Chr2g0311661 47.154 123 60 4 8 127 24 144 1.26e-28 113
Msa1175490 MtrunA17_Chr8g0372121 44.186 129 67 4 1 127 2 127 2.16e-28 113
Msa1175490 MtrunA17_Chr2g0311651 46.341 123 61 4 8 127 25 145 2.77e-28 112
Msa1175490 MtrunA17_Chr2g0312321 47.581 124 57 4 5 127 11 127 2.91e-28 112
Msa1175490 MtrunA17_Chr5g0417791 48.387 124 58 5 5 127 3 121 3.02e-28 111
Msa1175490 MtrunA17_Chr4g0017921 49.194 124 58 4 6 127 9 129 3.94e-28 113
Msa1175490 MtrunA17_Chr5g0405211 44.961 129 66 4 1 127 4 129 4.22e-28 113
Msa1175490 MtrunA17_Chr4g0056541 46.774 124 61 4 6 127 8 128 4.43e-28 113
Msa1175490 MtrunA17_Chr4g0038751 32.766 235 124 9 8 214 18 246 6.40e-28 111
Msa1175490 MtrunA17_Chr3g0144271 45.968 124 64 2 5 127 23 144 9.42e-28 113
Msa1175490 MtrunA17_Chr1g0200561 40.000 155 84 6 1 152 15 163 1.20e-27 111
Msa1175490 MtrunA17_Chr2g0309331 37.572 173 81 6 4 151 9 179 9.22e-27 109
Msa1175490 MtrunA17_Chr5g0442771 46.721 122 60 4 8 127 21 139 2.18e-26 107
Msa1175490 MtrunA17_Chr2g0321631 44.094 127 66 4 6 128 5 130 5.85e-26 104
Msa1175490 MtrunA17_Chr8g0346001 45.161 124 63 4 6 127 16 136 5.97e-25 105
Msa1175490 MtrunA17_Chr3g0131911 42.857 126 64 4 5 127 14 134 2.84e-24 100
Msa1175490 MtrunA17_Chr7g0266701 40.458 131 71 5 3 128 2 130 3.43e-21 92.0
Msa1175490 MtrunA17_Chr3g0113001 49.315 73 34 3 56 127 13 83 8.49e-15 74.3
Msa1175490 MtrunA17_Chr4g0050701 33.333 126 68 5 5 127 11 123 6.79e-14 69.7
Msa1175490 MtrunA17_Chr7g0243371 41.772 79 44 2 51 127 6 84 2.28e-13 66.2
Msa1175490 MtrunA17_Chr3g0113011 64.000 50 17 1 4 53 18 66 8.15e-13 63.2
Msa1175490 MtrunA17_Chr8g0384351 30.769 156 73 6 5 145 10 145 2.14e-12 65.5
Msa1175490 MtrunA17_Chr3g0130321 34.188 117 68 3 2 118 4 111 3.56e-11 62.4
Msa1175490 MtrunA17_Chr3g0113041 56.604 53 22 1 5 57 19 70 9.32e-11 57.4
Msa1175490 MtrunA17_Chr1g0194791 57.778 45 19 0 8 52 49 93 9.96e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1175490 AT4G35580.3 53.750 160 51 4 4 143 8 164 3.40e-49 174
Msa1175490 AT4G35580.2 53.750 160 51 4 4 143 8 164 3.53e-49 174
Msa1175490 AT4G35580.1 53.750 160 51 4 4 143 8 164 5.16e-49 173
Msa1175490 AT1G33060.1 60.800 125 45 3 4 127 23 144 9.01e-46 166
Msa1175490 AT1G33060.2 60.800 125 45 3 4 127 23 144 1.01e-45 166
Msa1175490 AT3G49530.2 48.171 164 63 4 3 146 11 172 2.12e-44 158
Msa1175490 AT3G49530.1 48.171 164 63 4 3 146 11 172 8.35e-44 158
Msa1175490 AT5G24590.2 50.318 157 56 3 4 140 12 166 8.88e-44 158
Msa1175490 AT4G01550.1 41.593 226 99 8 7 216 6 214 1.89e-43 157
Msa1175490 AT5G17260.1 57.600 125 49 3 4 127 5 126 1.43e-40 149
Msa1175490 AT3G03200.1 57.600 125 49 3 4 127 5 126 1.07e-39 147
Msa1175490 AT4G17980.1 47.552 143 71 3 2 141 3 144 1.02e-38 139
Msa1175490 AT4G17980.2 44.805 154 81 3 2 152 3 155 2.28e-38 139
Msa1175490 AT3G17730.1 44.048 168 71 4 4 151 5 169 3.28e-38 138
Msa1175490 AT1G65910.1 56.000 125 51 3 4 127 5 126 1.41e-36 140
Msa1175490 AT5G46590.1 43.114 167 72 4 5 150 6 170 1.51e-35 132
Msa1175490 AT5G46590.2 50.758 132 60 4 5 133 6 135 1.75e-35 131
Msa1175490 AT4G01520.1 37.273 220 106 9 6 197 5 220 6.55e-35 130
Msa1175490 AT3G10480.1 52.000 125 56 3 4 127 26 147 9.81e-35 133
Msa1175490 AT3G10480.2 52.000 125 56 3 4 127 26 147 9.87e-35 133
Msa1175490 AT2G27300.1 38.889 198 100 7 5 186 15 207 9.91e-35 131
Msa1175490 AT3G10490.1 50.000 128 60 3 1 127 23 147 2.63e-34 127
Msa1175490 AT4G01540.4 37.443 219 105 9 7 197 6 220 5.96e-34 130
Msa1175490 AT3G44290.2 47.794 136 65 5 1 135 11 141 7.11e-34 125
Msa1175490 AT5G09330.5 47.020 151 57 4 8 138 9 156 1.31e-33 130
Msa1175490 AT5G09330.2 47.020 151 57 4 8 138 9 156 1.31e-33 130
Msa1175490 AT5G09330.4 47.020 151 57 4 8 138 9 156 1.31e-33 130
Msa1175490 AT5G09330.3 47.020 151 57 4 8 138 9 156 1.31e-33 130
Msa1175490 AT5G09330.1 47.020 151 57 4 8 138 9 156 1.31e-33 130
Msa1175490 AT3G29035.1 42.373 177 90 7 5 178 24 191 1.34e-33 127
Msa1175490 AT3G10490.2 50.000 128 60 3 1 127 23 147 1.37e-33 130
Msa1175490 AT4G01540.2 37.443 219 105 9 7 197 6 220 1.39e-33 129
Msa1175490 AT4G01540.3 37.443 219 105 9 7 197 6 220 2.17e-33 129
Msa1175490 AT3G04070.2 50.781 128 56 4 4 127 9 133 2.45e-33 127
Msa1175490 AT4G01540.1 37.443 219 105 9 7 197 6 220 2.58e-33 130
Msa1175490 AT5G39610.1 53.226 124 52 5 5 127 20 138 3.55e-33 125
Msa1175490 AT3G04070.1 50.781 128 56 4 4 127 9 133 3.59e-33 127
Msa1175490 AT5G64060.1 44.586 157 63 5 2 138 4 156 4.12e-33 127
Msa1175490 AT5G39820.1 51.240 121 55 3 8 127 23 140 7.07e-33 126
Msa1175490 AT3G44290.1 47.794 136 65 5 1 135 11 141 1.62e-32 125
Msa1175490 AT5G61430.1 52.419 124 53 5 5 127 16 134 1.83e-32 125
Msa1175490 AT1G26870.1 49.587 121 57 3 8 127 19 136 3.28e-32 125
Msa1175490 AT5G07680.2 52.419 124 53 5 5 127 3 121 3.50e-32 124
Msa1175490 AT5G07680.1 52.419 124 53 5 5 127 17 135 3.69e-32 124
Msa1175490 AT5G08790.1 50.000 124 55 4 5 127 7 124 6.40e-32 122
Msa1175490 AT1G54330.1 45.395 152 63 4 4 138 5 153 1.12e-31 122
Msa1175490 AT2G17040.1 43.210 162 67 6 8 147 9 167 1.65e-31 120
Msa1175490 AT1G71930.2 42.857 154 81 5 1 152 5 153 1.74e-31 122
Msa1175490 AT1G71930.1 42.857 154 81 5 1 152 5 153 1.74e-31 122
Msa1175490 AT5G53950.1 52.419 124 55 3 5 127 17 137 1.76e-31 123
Msa1175490 AT3G15510.1 51.667 120 54 3 9 127 21 137 2.24e-31 122
Msa1175490 AT3G15500.1 42.945 163 65 6 4 143 13 170 2.49e-31 121
Msa1175490 AT1G02230.1 47.581 124 61 3 6 127 4 125 3.11e-31 122
Msa1175490 AT3G04060.1 50.806 124 56 4 5 127 20 139 3.41e-31 121
Msa1175490 AT1G01720.1 49.194 124 56 4 5 127 7 124 3.48e-31 120
Msa1175490 AT1G32510.1 47.761 134 62 4 1 127 1 133 4.33e-31 120
Msa1175490 AT5G22290.1 48.462 130 61 5 5 133 22 146 4.65e-31 121
Msa1175490 AT4G27410.2 48.800 125 58 4 4 127 13 132 5.11e-31 120
Msa1175490 AT1G52890.1 39.884 173 79 5 4 156 13 180 1.11e-30 119
Msa1175490 AT2G02450.1 41.420 169 87 6 8 168 54 218 1.28e-30 120
Msa1175490 AT2G02450.2 40.936 171 89 6 8 170 54 220 1.55e-30 121
Msa1175490 AT3G15170.1 50.407 123 57 3 6 127 21 140 1.81e-30 119
Msa1175490 AT1G69490.1 47.619 126 60 5 3 127 7 127 2.38e-30 117
Msa1175490 AT3G12910.1 48.780 123 57 4 8 127 24 143 2.52e-30 118
Msa1175490 AT3G18400.1 47.656 128 61 4 1 127 1 123 2.92e-30 118
Msa1175490 AT5G04395.1 40.230 174 75 6 3 163 26 183 5.05e-30 114
Msa1175490 AT3G10500.1 44.304 158 65 5 2 139 6 160 5.26e-30 121
Msa1175490 AT5G04410.1 43.038 158 67 4 2 139 6 160 5.33e-30 121
Msa1175490 AT5G66300.1 48.413 126 60 4 4 127 11 133 6.51e-30 117
Msa1175490 AT1G61110.1 50.000 124 57 4 5 127 16 135 6.66e-30 117
Msa1175490 AT5G18270.2 50.000 124 57 4 5 127 21 140 6.92e-30 118
Msa1175490 AT1G34190.1 51.240 121 55 3 8 127 19 136 7.11e-30 121
Msa1175490 AT2G24430.2 42.949 156 67 5 4 140 15 167 1.05e-29 117
Msa1175490 AT2G24430.1 42.949 156 67 5 4 140 15 167 1.05e-29 117
Msa1175490 AT1G12260.2 46.154 130 62 5 3 127 2 128 1.22e-29 117
Msa1175490 AT1G34180.3 50.413 121 56 3 8 127 19 136 1.40e-29 119
Msa1175490 AT5G18270.1 49.194 124 58 4 5 127 21 140 1.83e-29 117
Msa1175490 AT1G12260.1 46.154 130 62 5 3 127 2 128 1.94e-29 117
Msa1175490 AT1G62700.1 41.935 155 80 6 3 152 2 151 2.01e-29 117
Msa1175490 AT1G62700.2 41.935 155 80 6 3 152 2 151 2.01e-29 117
Msa1175490 AT1G34180.1 50.413 121 56 3 8 127 19 136 3.07e-29 119
Msa1175490 AT1G76420.1 46.032 126 62 4 4 127 21 142 6.11e-29 115
Msa1175490 AT5G63790.2 48.000 125 58 4 4 127 59 177 8.08e-29 114
Msa1175490 AT5G63790.1 48.000 125 58 4 4 127 49 167 8.29e-29 114
Msa1175490 AT1G77450.1 35.526 228 121 10 5 215 10 228 1.18e-28 112
Msa1175490 AT2G33480.2 50.000 124 53 4 5 127 15 130 1.55e-28 112
Msa1175490 AT2G33480.1 50.000 124 53 4 5 127 15 130 1.66e-28 112
Msa1175490 AT3G10480.3 41.250 160 57 5 2 127 24 180 2.43e-28 116
Msa1175490 AT4G27410.3 44.286 140 59 5 4 127 13 149 2.73e-28 113
Msa1175490 AT5G13180.1 45.161 124 61 3 5 127 14 131 3.03e-28 111
Msa1175490 AT5G62380.2 46.400 125 62 4 5 127 7 128 3.18e-28 113
Msa1175490 AT5G62380.1 46.400 125 62 4 5 127 7 128 3.18e-28 113
Msa1175490 AT1G56010.2 45.968 124 62 3 5 127 19 138 3.31e-28 113
Msa1175490 AT1G02250.1 40.260 154 73 4 6 142 4 155 5.10e-28 113
Msa1175490 AT2G18060.3 46.032 126 63 4 4 127 8 130 7.21e-28 113
Msa1175490 AT2G18060.1 46.032 126 63 4 4 127 8 130 7.21e-28 113
Msa1175490 AT4G10350.1 48.387 124 59 4 6 127 10 130 1.21e-27 112
Msa1175490 AT4G36160.1 38.462 169 96 6 4 170 9 171 1.69e-27 112
Msa1175490 AT4G36160.3 38.462 169 96 6 4 170 9 171 1.69e-27 112
Msa1175490 AT4G36160.2 45.238 126 64 4 4 127 13 135 2.12e-27 112
Msa1175490 AT2G43000.1 46.281 121 59 4 8 127 21 136 3.07e-27 109
Msa1175490 AT1G33280.1 48.387 124 59 4 6 127 9 129 3.53e-27 110
Msa1175490 AT1G34180.4 45.865 133 56 4 8 127 19 148 3.01e-26 109
Msa1175490 AT1G34180.2 45.865 133 56 4 8 127 19 148 4.19e-26 110
Msa1175490 AT1G79580.3 46.032 126 64 4 4 127 16 139 1.55e-25 106
Msa1175490 AT1G79580.5 46.032 126 64 4 4 127 16 139 1.55e-25 106
Msa1175490 AT1G79580.4 46.032 126 64 4 4 127 16 139 1.55e-25 106
Msa1175490 AT1G79580.2 46.032 126 64 4 4 127 16 139 1.55e-25 106
Msa1175490 AT1G79580.1 46.032 126 64 4 4 127 16 139 1.55e-25 106
Msa1175490 AT2G46770.1 45.238 126 62 5 5 127 16 137 1.64e-25 106
Msa1175490 AT5G22380.1 41.667 132 72 4 1 128 1 131 4.21e-25 102
Msa1175490 AT3G61910.1 44.000 125 65 4 5 127 11 132 4.79e-25 104
Msa1175490 AT4G28530.1 39.860 143 68 3 1 127 6 146 6.31e-25 104
Msa1175490 AT1G52880.1 44.667 150 68 6 9 155 21 158 8.84e-25 103
Msa1175490 AT3G12977.1 35.135 185 84 6 5 163 18 192 9.86e-25 102
Msa1175490 AT3G44350.1 42.424 132 70 4 1 128 1 130 1.68e-24 99.0
Msa1175490 AT1G32770.1 46.457 127 57 6 6 127 17 137 3.19e-24 102
Msa1175490 AT3G44350.2 42.424 132 70 4 1 128 1 130 6.18e-24 99.8
Msa1175490 AT3G04420.2 34.375 192 102 7 6 175 4 193 1.66e-22 96.7
Msa1175490 AT3G04420.1 34.375 192 102 7 6 175 4 193 2.39e-22 97.1
Msa1175490 AT1G01010.1 39.103 156 71 5 7 140 5 158 3.42e-22 97.8
Msa1175490 AT1G32870.2 47.934 121 57 4 8 127 13 128 1.50e-21 96.7
Msa1175490 AT1G32870.1 47.934 121 57 4 8 127 13 128 1.52e-21 96.7
Msa1175490 AT1G32870.3 47.934 121 57 4 8 127 49 164 1.69e-21 96.7
Msa1175490 AT1G02220.1 37.671 146 72 4 6 136 4 145 4.01e-20 91.7
Msa1175490 AT4G28530.2 40.708 113 50 2 1 98 6 116 2.13e-18 85.5
Msa1175490 AT3G04430.1 44.340 106 54 4 11 115 6 107 1.47e-17 80.9
Msa1175490 AT5G61430.2 52.055 73 32 3 56 127 1 71 9.43e-16 77.0
Msa1175490 AT5G64530.2 36.000 125 62 5 5 127 3 111 1.57e-15 73.9
Msa1175490 AT5G64530.1 35.714 126 63 5 4 127 2 111 3.84e-15 73.6
Msa1175490 AT3G12977.2 34.426 122 57 3 63 163 20 139 7.88e-14 70.9
Msa1175490 AT1G56010.1 50.000 66 30 2 63 127 8 71 2.73e-13 69.7
Msa1175490 AT4G10350.2 45.333 75 38 2 54 127 11 83 1.22e-12 68.2
Msa1175490 AT2G33480.3 50.000 68 31 2 61 127 8 73 3.19e-12 65.9

Find 62 sgRNAs with CRISPR-Local

Find 436 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCATTTCGAGATGATTTC+GGG 0.227385 8_1:+6834153 Msa1175490:CDS
ACAAATACGCAAATAGTAAA+AGG 0.269504 8_1:+6828064 Msa1175490:CDS
TAATATGGAACCAATGTTTC+AGG 0.269573 8_1:+6833616 Msa1175490:CDS
GCATCATTTCGAGATGATTT+CGG 0.275502 8_1:+6834152 Msa1175490:CDS
TGGTCTTGACCGTAAGATTA+AGG 0.284539 8_1:+6828125 Msa1175490:CDS
TACTATAATGGTTGTGTTCC+TGG 0.284994 8_1:+6828192 Msa1175490:CDS
TTTACAGTGTGGCAATGTTC+TGG 0.292487 8_1:+6834082 Msa1175490:intron
AGAGGTACAGACAATGTTAT+TGG 0.307609 8_1:+6828150 Msa1175490:CDS
TTCCTCTTCAGCTTTCTTCT+CGG 0.325142 8_1:-6833395 None:intergenic
AAAACACTTGTGTACTATAA+TGG 0.357000 8_1:+6828180 Msa1175490:CDS
GACATGGTGGTGGTTGGTCT+TGG 0.361614 8_1:-6834290 None:intergenic
TACCTTGCCAGAAAATAATA+TGG 0.364967 8_1:+6833601 Msa1175490:CDS
CATATCGATGTGTCCACTTT+CGG 0.387067 8_1:-6833741 None:intergenic
TTCCTGGTGTTAAAAGCAAC+TGG 0.389751 8_1:+6828208 Msa1175490:CDS
TCGTTGAGAATGATTTACTA+TGG 0.400930 8_1:+6833902 Msa1175490:CDS
CTTCTTGAACATCCTAGTTC+AGG 0.401435 8_1:+6834119 Msa1175490:CDS
GAGGTACAGACAATGTTATT+GGG 0.411621 8_1:+6828151 Msa1175490:CDS
GAAGGACACAGTGTGGATAC+TGG 0.428296 8_1:+6828094 Msa1175490:CDS
TGATGAGGTTCCTGAAACAT+TGG 0.441580 8_1:-6833626 None:intergenic
GACCGTAAGATTAAGGTTAG+AGG 0.442904 8_1:+6828132 Msa1175490:CDS
TGGTTGGTCTTGGATGATAC+TGG 0.447272 8_1:-6834280 None:intergenic
CAAGCTCTTCATCTGTTGGT+TGG 0.449162 8_1:-6827805 None:intergenic
TGTTTGCAAGTTCGAACCTT+GGG 0.454947 8_1:+6827898 Msa1175490:CDS
AATGTTTCAGGAACCTCATC+AGG 0.459890 8_1:+6833628 Msa1175490:CDS
CTCGGACTGGACAGGAAAGC+TGG 0.467178 8_1:-6833879 None:intergenic
TCATTCTCAACGACTCGGAC+TGG 0.469733 8_1:-6833892 None:intergenic
TTTACAAGCTCTTCATCTGT+TGG 0.472698 8_1:-6827809 None:intergenic
TACCTCTAACCTTAATCTTA+CGG 0.491526 8_1:-6828134 None:intergenic
GGTTGGAATCTGAATCCAAC+AGG 0.493475 8_1:-6827788 None:intergenic
GATAGAATGGTATGTGATGA+AGG 0.494733 8_1:+6833421 Msa1175490:CDS
CAATTGTTTCAGGTAATAAG+TGG 0.498045 8_1:+6833578 Msa1175490:intron
TCGGAACTCATGTGTCTACT+TGG 0.499283 8_1:-6833448 None:intergenic
TTCAATCTCTGAAAATGAGA+TGG 0.499943 8_1:+6833685 Msa1175490:CDS
ATGACAAACTCATTTCCTGT+TGG 0.502565 8_1:+6827773 Msa1175490:CDS
TGAAGAGGAAACTGATAGAA+TGG 0.513653 8_1:+6833408 Msa1175490:CDS
GAAAATCAAGAAACAGTTGA+AGG 0.516420 8_1:+6833475 Msa1175490:CDS
GAAGACTGGTATGTCGAGAA+AGG 0.517808 8_1:-6833665 None:intergenic
AGCCGAGAAGAAAGCTGAAG+AGG 0.521986 8_1:+6833393 Msa1175490:CDS
TTCGAACCTTGGGACTTACC+AGG 0.522061 8_1:+6827908 Msa1175490:CDS
TTGTTTCTTCGTAGAGTGGA+AGG 0.522631 8_1:-6834254 None:intergenic
GTTATTGTTTCTTCGTAGAG+TGG 0.529521 8_1:-6834258 None:intergenic
ATCAATTCAATGTTAAATGA+CGG 0.532646 8_1:+6833803 Msa1175490:CDS
GAAGTATCTTTATCGAACTC+AGG 0.533769 8_1:+6833707 Msa1175490:CDS
TGCTGAATTAGTCTCTATGC+CGG 0.535468 8_1:+6833940 Msa1175490:CDS
CTCAACGACTCGGACTGGAC+AGG 0.555897 8_1:-6833887 None:intergenic
CAATGTTCTGGATACTTCAA+CGG 0.563840 8_1:+6834094 Msa1175490:CDS
ATGTTTGCAAGTTCGAACCT+TGG 0.568862 8_1:+6827897 Msa1175490:CDS
ATAGTAAAAGGTTTAACAGA+AGG 0.579914 8_1:+6828076 Msa1175490:CDS
ATAGAATGGTATGTGATGAA+GGG 0.580154 8_1:+6833422 Msa1175490:CDS
TAAAATCCGATGATCCAGAA+TGG 0.594696 8_1:+6828019 Msa1175490:CDS
TGTGGATACTGGAAAGCCAC+TGG 0.602459 8_1:+6828105 Msa1175490:CDS
AGCTATAACATTGTTGACAG+TGG 0.605859 8_1:-6827867 None:intergenic
TTGCAATTGATCATCTCTAG+AGG 0.607895 8_1:-6834215 None:intergenic
ATGATTTACTATGGAAGCAG+TGG 0.614801 8_1:+6833911 Msa1175490:CDS
AATCTTACGGTCAAGACCAG+TGG 0.626820 8_1:-6828121 None:intergenic
TAGAATGGTATGTGATGAAG+GGG 0.641183 8_1:+6833423 Msa1175490:CDS
ATCATTTCGAGATGATTTCG+GGG 0.650121 8_1:+6834154 Msa1175490:CDS
TTTGCGTATTTGTAATCGCG+AGG 0.654879 8_1:-6828054 None:intergenic
GTAAATCATTCTCAACGACT+CGG 0.660341 8_1:-6833897 None:intergenic
TCCTGGTGTTAAAAGCAACT+GGG 0.666261 8_1:+6828209 Msa1175490:CDS
TCATTTCGAGATGATTTCGG+GGG 0.671935 8_1:+6834155 Msa1175490:CDS
TTTAACAGAAGGACACAGTG+TGG 0.694289 8_1:+6828087 Msa1175490:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATGAGAAAATAATGAT+GGG - chr8_1:6827951-6827970 None:intergenic 15.0%
!!! TTTTTATGAGAAAATAATGA+TGG - chr8_1:6827952-6827971 None:intergenic 15.0%
!! ATATAATGTGAAATATGATA+AGG + chr8_1:6830043-6830062 Msa1175490:intron 15.0%
!!! ACATTAGAAATTTTAAAATG+TGG + chr8_1:6831498-6831517 Msa1175490:intron 15.0%
!! TTTATGAGAAAATAATGATG+GGG - chr8_1:6827950-6827969 None:intergenic 20.0%
!!! ATCTTCATTTACTATTTTGT+TGG - chr8_1:6829408-6829427 None:intergenic 20.0%
!!! AAATTGAATAAGTCACTTTA+TGG - chr8_1:6829539-6829558 None:intergenic 20.0%
!!! TCTAATCTTTTCAAAGTTTT+TGG - chr8_1:6830541-6830560 None:intergenic 20.0%
!!! ATTGATTCATTGTGATATTT+GGG - chr8_1:6831019-6831038 None:intergenic 20.0%
!!! AATTGATTCATTGTGATATT+TGG - chr8_1:6831020-6831039 None:intergenic 20.0%
!! TTTATGGATATATTACAATG+AGG + chr8_1:6831264-6831283 Msa1175490:intron 20.0%
!!! ATTCAAGCTACTAATAATTT+TGG + chr8_1:6831434-6831453 Msa1175490:intron 20.0%
!! AATTAATAAGGTGTATTCAT+TGG - chr8_1:6832171-6832190 None:intergenic 20.0%
!!! AATAAACTTGTTTTCATCAA+TGG - chr8_1:6832650-6832669 None:intergenic 20.0%
!!! ATGTTTTAACTTTATGAGTA+TGG + chr8_1:6833290-6833309 Msa1175490:intron 20.0%
!! ATCAATTCAATGTTAAATGA+CGG + chr8_1:6833803-6833822 Msa1175490:CDS 20.0%
!! ATACACACTTTAATATCATT+TGG - chr8_1:6833987-6834006 None:intergenic 20.0%
! TATCTCAAAAACAAGTTACT+TGG + chr8_1:6827836-6827855 Msa1175490:CDS 25.0%
! ACAAATACGCAAATAGTAAA+AGG + chr8_1:6828064-6828083 Msa1175490:CDS 25.0%
! ATAGTAAAAGGTTTAACAGA+AGG + chr8_1:6828076-6828095 Msa1175490:CDS 25.0%
! AAAACACTTGTGTACTATAA+TGG + chr8_1:6828180-6828199 Msa1175490:CDS 25.0%
!! TTTTATATCTTAATACCACC+AGG - chr8_1:6829076-6829095 None:intergenic 25.0%
! TTAGATTTACTTGAAGATTC+AGG - chr8_1:6829212-6829231 None:intergenic 25.0%
! ACCTTTCAGATTAAAGATTT+GGG - chr8_1:6829311-6829330 None:intergenic 25.0%
! AATAGTAAATGAAGATGAAG+TGG + chr8_1:6829412-6829431 Msa1175490:intron 25.0%
!!! ATGAAGTGGTTTTAAGAAAA+AGG + chr8_1:6829426-6829445 Msa1175490:intron 25.0%
!!! TGAAGTGGTTTTAAGAAAAA+GGG + chr8_1:6829427-6829446 Msa1175490:intron 25.0%
! ATTCAATTTACACACTTGAT+TGG + chr8_1:6829550-6829569 Msa1175490:intron 25.0%
! TTCAATTTACACACTTGATT+GGG + chr8_1:6829551-6829570 Msa1175490:intron 25.0%
! AATAATCTAAGCCTTCAATT+TGG + chr8_1:6829744-6829763 Msa1175490:intron 25.0%
! ATGTAATCTTGTAAATAAGC+AGG + chr8_1:6830103-6830122 Msa1175490:intron 25.0%
! TGTAATCTTGTAAATAAGCA+GGG + chr8_1:6830104-6830123 Msa1175490:intron 25.0%
! TTCATGAAAAGTAACATTTC+TGG + chr8_1:6830375-6830394 Msa1175490:intron 25.0%
! TTACAAAGGTTATGTTCTTA+TGG - chr8_1:6830428-6830447 None:intergenic 25.0%
!!! ATATTTTTAGGCTATAAACC+TGG - chr8_1:6830451-6830470 None:intergenic 25.0%
!! ACTTTGAAAAGATTAGAATC+AGG + chr8_1:6830544-6830563 Msa1175490:intron 25.0%
! AGAATCATGTAAAACATGAT+AGG + chr8_1:6830570-6830589 Msa1175490:intron 25.0%
! GAATCATGTAAAACATGATA+GGG + chr8_1:6830571-6830590 Msa1175490:intron 25.0%
! CCAAATTACCAAATTGTTAT+TGG - chr8_1:6830666-6830685 None:intergenic 25.0%
!! CCAATAACAATTTGGTAATT+TGG + chr8_1:6830663-6830682 Msa1175490:intron 25.0%
!! CCTTCATTTTATAACTCTAA+AGG - chr8_1:6830793-6830812 None:intergenic 25.0%
!!! CCTTTAGAGTTATAAAATGA+AGG + chr8_1:6830790-6830809 Msa1175490:intron 25.0%
! AATGAAGGTAAATCAAATTC+AGG + chr8_1:6830805-6830824 Msa1175490:intron 25.0%
! ATGAAGGTAAATCAAATTCA+GGG + chr8_1:6830806-6830825 Msa1175490:intron 25.0%
! AAAATCCTTAGAAGTGATAA+TGG - chr8_1:6830832-6830851 None:intergenic 25.0%
!!! TTATCACTTCTAAGGATTTT+AGG + chr8_1:6830832-6830851 Msa1175490:intron 25.0%
! TTGATTCATTGTGATATTTG+GGG - chr8_1:6831018-6831037 None:intergenic 25.0%
! AAATTGACAAACATCACAAA+TGG + chr8_1:6831098-6831117 Msa1175490:intron 25.0%
! TTATTATCAACACAGATAGA+AGG + chr8_1:6831123-6831142 Msa1175490:intron 25.0%
! TATTATCAACACAGATAGAA+GGG + chr8_1:6831124-6831143 Msa1175490:intron 25.0%
! CATATTTGACAATCTTTGAT+TGG + chr8_1:6831158-6831177 Msa1175490:intron 25.0%
!! AGGTTGAACATCTTTATTTA+TGG + chr8_1:6831248-6831267 Msa1175490:intron 25.0%
! TCATGTATAATGCATTTATC+AGG + chr8_1:6831393-6831412 Msa1175490:intron 25.0%
! TGCATTTATCAGGTAAAAAT+TGG + chr8_1:6831403-6831422 Msa1175490:intron 25.0%
!!! ATGGTAACAATGGTTTTATT+TGG + chr8_1:6831549-6831568 Msa1175490:intron 25.0%
! GAATACACCTTATTAATTGA+AGG + chr8_1:6832173-6832192 Msa1175490:intron 25.0%
! ACCTTATTAATTGAAGGTAA+TGG + chr8_1:6832179-6832198 Msa1175490:intron 25.0%
! TCCATTACCTTCAATTAATA+AGG - chr8_1:6832183-6832202 None:intergenic 25.0%
! GATACCATATTATGAAACAA+TGG + chr8_1:6833023-6833042 Msa1175490:intron 25.0%
! TCTTCCATTGTTTCATAATA+TGG - chr8_1:6828236-6828255 None:intergenic 25.0%
!!! ATTGGTTCCATATTATTTTC+TGG - chr8_1:6833611-6833630 None:intergenic 25.0%
!!! TTTTTTTGAAACTATGGAAG+AGG + chr8_1:6833769-6833788 Msa1175490:CDS 25.0%
!!! AAATGACGGATATTTTGTTA+AGG + chr8_1:6833817-6833836 Msa1175490:intron 25.0%
!! TTTTGAGCAGAAATATTTAC+CGG - chr8_1:6833962-6833981 None:intergenic 25.0%
!!! CTTATTTTTGAACAAGTACT+TGG + chr8_1:6834009-6834028 Msa1175490:intron 25.0%
!! TTCTTCTAAATTTTACAGTG+TGG + chr8_1:6834071-6834090 Msa1175490:intron 25.0%
!!! GTAACTTGTTTTTGAGATAG+TGG - chr8_1:6827835-6827854 None:intergenic 30.0%
TACCTCTAACCTTAATCTTA+CGG - chr8_1:6828137-6828156 None:intergenic 30.0%
GGGTGATTATTATGAAACAA+TGG + chr8_1:6828229-6828248 Msa1175490:intron 30.0%
!! TTGGACAACAAAGTATTGAA+TGG + chr8_1:6828480-6828499 Msa1175490:intron 30.0%
!! AACAAAGTATTGAATGGTTG+AGG + chr8_1:6828486-6828505 Msa1175490:intron 30.0%
!! ACAAAGTATTGAATGGTTGA+GGG + chr8_1:6828487-6828506 Msa1175490:intron 30.0%
TAGTAAAAAAATCAGCAAGC+TGG + chr8_1:6828520-6828539 Msa1175490:intron 30.0%
! AGAGTGTTAAGATACTTGAA+AGG - chr8_1:6828975-6828994 None:intergenic 30.0%
AGCATTAAAATGAGTTTGAG+TGG + chr8_1:6829001-6829020 Msa1175490:intron 30.0%
GCATTAAAATGAGTTTGAGT+GGG + chr8_1:6829002-6829021 Msa1175490:intron 30.0%
AATCTAAACAGTACTTTCTC+TGG + chr8_1:6829225-6829244 Msa1175490:intron 30.0%
CACCTTTCAGATTAAAGATT+TGG - chr8_1:6829312-6829331 None:intergenic 30.0%
!!! TGGTTTTAAGAAAAAGGGAA+TGG + chr8_1:6829432-6829451 Msa1175490:intron 30.0%
AATCATCAATGGTTACAAAC+AGG - chr8_1:6829468-6829487 None:intergenic 30.0%
ACTTCAGTCTTAATCATCAA+TGG - chr8_1:6829479-6829498 None:intergenic 30.0%
GTTTATATGATTATACCTCC+TGG - chr8_1:6829593-6829612 None:intergenic 30.0%
AAGGGATATAACCAAATTGA+AGG - chr8_1:6829758-6829777 None:intergenic 30.0%
TTCAATTTGGTTATATCCCT+TGG + chr8_1:6829757-6829776 Msa1175490:intron 30.0%
AAAGCAAAACAAGAATGAGA+AGG + chr8_1:6830001-6830020 Msa1175490:intron 30.0%
GCATATATGGAATTGACAAT+AGG + chr8_1:6830076-6830095 Msa1175490:intron 30.0%
GTAATCTTGTAAATAAGCAG+GGG + chr8_1:6830105-6830124 Msa1175490:intron 30.0%
! GCAAGGAAGTCTATATTTTT+AGG - chr8_1:6830463-6830482 None:intergenic 30.0%
GCATATGACCAATAACAATT+TGG + chr8_1:6830655-6830674 Msa1175490:intron 30.0%
TTCCTACATTGAGTATATGT+TGG + chr8_1:6830704-6830723 Msa1175490:intron 30.0%
! ATGACTTTAGTAGGTTTGTT+TGG - chr8_1:6830942-6830961 None:intergenic 30.0%
!! CTATTGTTGATGACTTTAGT+AGG - chr8_1:6830951-6830970 None:intergenic 30.0%
TACTTATGACCATGAATAGA+AGG + chr8_1:6830979-6830998 Msa1175490:intron 30.0%
TGAGATAAACTATGAGGAAA+AGG + chr8_1:6831057-6831076 Msa1175490:intron 30.0%
ATATTCCTAAAACTGCACTT+TGG - chr8_1:6831206-6831225 None:intergenic 30.0%
! AGGAATATGAGTAAAAGTAC+TGG + chr8_1:6831218-6831237 Msa1175490:intron 30.0%
!! GTAAAAGTACTGGAAACAAT+AGG + chr8_1:6831228-6831247 Msa1175490:intron 30.0%
TTAGAAACAGAAGACTGAAA+AGG + chr8_1:6831291-6831310 Msa1175490:intron 30.0%
ATGGTGGTTTATACAAATTG+AGG - chr8_1:6831335-6831354 None:intergenic 30.0%
AATTTGTATAAACCACCATG+AGG + chr8_1:6831336-6831355 Msa1175490:intron 30.0%
ATCAGATTAACCTTGAAATG+TGG + chr8_1:6831465-6831484 Msa1175490:intron 30.0%
TCTATATTCACCACATTTCA+AGG - chr8_1:6831478-6831497 None:intergenic 30.0%
TTTGGTAAATGAACATGAAC+AGG + chr8_1:6831567-6831586 Msa1175490:intron 30.0%
TATCTGATTCATCTCATGAT+TGG - chr8_1:6831665-6831684 None:intergenic 30.0%
! AAAACAGTTGATATACCTGA+AGG + chr8_1:6831696-6831715 Msa1175490:intron 30.0%
AGGATTGGACTTATATGAAT+TGG + chr8_1:6831941-6831960 Msa1175490:intron 30.0%
GGATTGGACTTATATGAATT+GGG + chr8_1:6831942-6831961 Msa1175490:intron 30.0%
GATTGGACTTATATGAATTG+GGG + chr8_1:6831943-6831962 Msa1175490:intron 30.0%
ACAAAACCTAGAGTTATTCT+TGG + chr8_1:6832022-6832041 Msa1175490:intron 30.0%
TCTAAGAAGCAATATGGAAA+TGG - chr8_1:6832065-6832084 None:intergenic 30.0%
! TCTGATTCTAAGAAGCAATA+TGG - chr8_1:6832071-6832090 None:intergenic 30.0%
! CAAGTGATTCAATTTTTGAC+TGG - chr8_1:6832254-6832273 None:intergenic 30.0%
CACTGAAATGAAAACTCTAT+GGG - chr8_1:6832375-6832394 None:intergenic 30.0%
TCACTGAAATGAAAACTCTA+TGG - chr8_1:6832376-6832395 None:intergenic 30.0%
! TCTATCAACAATTTGAAGCA+AGG - chr8_1:6832422-6832441 None:intergenic 30.0%
ACTAAAGTTTGAGCAATTTG+TGG + chr8_1:6832530-6832549 Msa1175490:intron 30.0%
AAATCATCAAGATCAGGAAT+AGG + chr8_1:6832617-6832636 Msa1175490:intron 30.0%
TAATTTGAACCAGTAAGAAG+TGG + chr8_1:6832713-6832732 Msa1175490:intron 30.0%
! AAGCTTTTCATCTTCAACAA+TGG - chr8_1:6832822-6832841 None:intergenic 30.0%
TCAAATATGCAGAAAAACAG+AGG + chr8_1:6832841-6832860 Msa1175490:intron 30.0%
GGAAGAAACAAGAAGAAAAA+CGG + chr8_1:6832943-6832962 Msa1175490:intron 30.0%
AAACAAGAAGAAAAACGGTT+AGG + chr8_1:6832948-6832967 Msa1175490:intron 30.0%
TTAGGATCGCAAGAAAAAAA+CGG + chr8_1:6832966-6832985 Msa1175490:intron 30.0%
TTGTTGTAACAAAACAAACC+TGG - chr8_1:6833271-6833290 None:intergenic 30.0%
!!! GAGTATGGTATGAGTTTTTT+CGG + chr8_1:6833305-6833324 Msa1175490:intron 30.0%
! AAAAGTCCTCTACGAAATTT+TGG - chr8_1:6833350-6833369 None:intergenic 30.0%
ATAGAATGGTATGTGATGAA+GGG + chr8_1:6833422-6833441 Msa1175490:CDS 30.0%
! TGTTTCTTGATTTTCGTGAT+CGG - chr8_1:6833470-6833489 None:intergenic 30.0%
GAAAATCAAGAAACAGTTGA+AGG + chr8_1:6833475-6833494 Msa1175490:CDS 30.0%
AAGAATGAAATCCTTACATC+AGG - chr8_1:6833505-6833524 None:intergenic 30.0%
ACTTGTTTGTCAATTGTTTC+AGG + chr8_1:6833568-6833587 Msa1175490:intron 30.0%
! CAATTGTTTCAGGTAATAAG+TGG + chr8_1:6833578-6833597 Msa1175490:intron 30.0%
TACCTTGCCAGAAAATAATA+TGG + chr8_1:6833601-6833620 Msa1175490:CDS 30.0%
!! TTCCATATTATTTTCTGGCA+AGG - chr8_1:6833606-6833625 None:intergenic 30.0%
TAATATGGAACCAATGTTTC+AGG + chr8_1:6833616-6833635 Msa1175490:CDS 30.0%
! TTCAATCTCTGAAAATGAGA+TGG + chr8_1:6833685-6833704 Msa1175490:CDS 30.0%
!!! GCAGAGTTTTTTTGAAACTA+TGG + chr8_1:6833763-6833782 Msa1175490:CDS 30.0%
TCGTTGAGAATGATTTACTA+TGG + chr8_1:6833902-6833921 Msa1175490:CDS 30.0%
! ATGAAATCTCTAAGTTGAGT+TGG + chr8_1:6834037-6834056 Msa1175490:intron 30.0%
ATGACAAACTCATTTCCTGT+TGG + chr8_1:6827773-6827792 Msa1175490:CDS 35.0%
TTTACAAGCTCTTCATCTGT+TGG - chr8_1:6827812-6827831 None:intergenic 35.0%
AGCTATAACATTGTTGACAG+TGG - chr8_1:6827870-6827889 None:intergenic 35.0%
!! GGTTTGTTTGTGATTTTACC+TGG - chr8_1:6827929-6827948 None:intergenic 35.0%
TAAAATCCGATGATCCAGAA+TGG + chr8_1:6828019-6828038 Msa1175490:CDS 35.0%
GAAAAACCATTCTGGATCAT+CGG - chr8_1:6828028-6828047 None:intergenic 35.0%
GGACAAAAGAAAAACCATTC+TGG - chr8_1:6828036-6828055 None:intergenic 35.0%
! AGAGGTACAGACAATGTTAT+TGG + chr8_1:6828150-6828169 Msa1175490:CDS 35.0%
GAGGTACAGACAATGTTATT+GGG + chr8_1:6828151-6828170 Msa1175490:CDS 35.0%
TACTATAATGGTTGTGTTCC+TGG + chr8_1:6828192-6828211 Msa1175490:CDS 35.0%
GTTTGTGTAGTACAACTCTT+AGG - chr8_1:6828313-6828332 None:intergenic 35.0%
CAATAGTGAAGTTACTTGCA+TGG + chr8_1:6828363-6828382 Msa1175490:intron 35.0%
AATGTCTATCATCTCCAACT+TGG + chr8_1:6828461-6828480 Msa1175490:intron 35.0%
! CAATACTTTGTTGTCCAAGT+TGG - chr8_1:6828478-6828497 None:intergenic 35.0%
TGATTGTCACAGTAGATAAC+AGG + chr8_1:6828672-6828691 Msa1175490:intron 35.0%
GAAGCTTCTCTTCAATTACA+AGG - chr8_1:6828921-6828940 None:intergenic 35.0%
AATTGAAGAGAAGCTTCTCT+AGG + chr8_1:6828924-6828943 Msa1175490:intron 35.0%
ATTGAAGAGAAGCTTCTCTA+GGG + chr8_1:6828925-6828944 Msa1175490:intron 35.0%
TGAGTGATGAATGTGATATC+TGG + chr8_1:6829050-6829069 Msa1175490:intron 35.0%
TAAGCAGGAACATCAGAATA+AGG + chr8_1:6829116-6829135 Msa1175490:intron 35.0%
AAGGTTGTGAATCATCATTG+TGG + chr8_1:6829135-6829154 Msa1175490:intron 35.0%
TCATTGTGGAGCTTAACATT+TGG + chr8_1:6829149-6829168 Msa1175490:intron 35.0%
AGCTTAACATTTGGATCAGA+AGG + chr8_1:6829158-6829177 Msa1175490:intron 35.0%
!! GTGTACTAATAGGCTTTGAA+TGG + chr8_1:6829180-6829199 Msa1175490:intron 35.0%
!! TACTAATAGGCTTTGAATGG+AGG + chr8_1:6829183-6829202 Msa1175490:intron 35.0%
AATGAGCAACTTCAATACCA+AGG + chr8_1:6829270-6829289 Msa1175490:intron 35.0%
GGCATTCTTAAATACTTCCT+TGG - chr8_1:6829290-6829309 None:intergenic 35.0%
GCCCAAATCTTTAATCTGAA+AGG + chr8_1:6829307-6829326 Msa1175490:intron 35.0%
!! TTGATGATGTGATCTTAGCT+GGG - chr8_1:6829379-6829398 None:intergenic 35.0%
TTTACACACTTGATTGGGAT+TGG + chr8_1:6829556-6829575 Msa1175490:intron 35.0%
!!! GTGAACAATGCTTTTTTGCA+TGG - chr8_1:6829632-6829651 None:intergenic 35.0%
!! CATTGTTCACATCAAGTTGA+TGG + chr8_1:6829642-6829661 Msa1175490:intron 35.0%
!!! TTTTGAAACATACTCTCCAG+TGG - chr8_1:6829726-6829745 None:intergenic 35.0%
AAAGTGAAACATCATGCTGA+TGG - chr8_1:6829815-6829834 None:intergenic 35.0%
AAGCAAACAAGCATGATTGT+TGG - chr8_1:6829943-6829962 None:intergenic 35.0%
TTTGCTTCAGTGAAGGATTT+AGG + chr8_1:6829956-6829975 Msa1175490:intron 35.0%
AGGAGAAGAAGATGCATATA+TGG + chr8_1:6830063-6830082 Msa1175490:intron 35.0%
AGCAATAATAGGAGAATCAG+AGG + chr8_1:6830165-6830184 Msa1175490:intron 35.0%
GCAATAATAGGAGAATCAGA+GGG + chr8_1:6830166-6830185 Msa1175490:intron 35.0%
GAATCTTCTGGTGTAGAAAT+AGG + chr8_1:6830235-6830254 Msa1175490:intron 35.0%
ATCAACAAAAGGTTGAGATG+AGG + chr8_1:6830288-6830307 Msa1175490:intron 35.0%
TCAACAAAAGGTTGAGATGA+GGG + chr8_1:6830289-6830308 Msa1175490:intron 35.0%
AGAACATAACCTTTGTAACC+AGG + chr8_1:6830430-6830449 Msa1175490:intron 35.0%
AATATAGACTTCCTTGCTCT+AGG + chr8_1:6830466-6830485 Msa1175490:intron 35.0%
CATGATAGGGAGATTTATGA+TGG + chr8_1:6830584-6830603 Msa1175490:intron 35.0%
CACCAACATATACTCAATGT+AGG - chr8_1:6830709-6830728 None:intergenic 35.0%
!! CTAAAGGCATTCTTCATCAT+AGG - chr8_1:6830777-6830796 None:intergenic 35.0%
TTTGATCAAATCCAAAGCTG+AGG - chr8_1:6830914-6830933 None:intergenic 35.0%
TTGAGTGTTCCTTCTATTCA+TGG - chr8_1:6830991-6831010 None:intergenic 35.0%
TGAATAGAAGGAACACTCAA+AGG + chr8_1:6830991-6831010 Msa1175490:intron 35.0%
GTAGCATGAGATAAACTATG+AGG + chr8_1:6831051-6831070 Msa1175490:intron 35.0%
GACTGAAAAGGAAAAACTGA+AGG + chr8_1:6831303-6831322 Msa1175490:intron 35.0%
ATTGTTACCATACATCATGC+TGG - chr8_1:6831540-6831559 None:intergenic 35.0%
AGCATGATGTATGGTAACAA+TGG + chr8_1:6831539-6831558 Msa1175490:intron 35.0%
! CATGATTGGTTACTTGATTC+TGG - chr8_1:6831651-6831670 None:intergenic 35.0%
AATTGGGAGTAGAAGCAATA+TGG + chr8_1:6831742-6831761 Msa1175490:intron 35.0%
CAATCACATTTGTTTGCTTC+AGG - chr8_1:6831795-6831814 None:intergenic 35.0%
!!! GAGTTTTGTTATCAGAAGCA+TGG - chr8_1:6831972-6831991 None:intergenic 35.0%
GATAACAAAACTCCACAGTA+TGG + chr8_1:6831979-6831998 Msa1175490:intron 35.0%
GGAAATGGAAAATCATTTGC+TGG - chr8_1:6832050-6832069 None:intergenic 35.0%
TACCATTATTACTCTCCTCT+TGG + chr8_1:6832141-6832160 Msa1175490:intron 35.0%
ATCCAAGAGGAGAGTAATAA+TGG - chr8_1:6832146-6832165 None:intergenic 35.0%
! GTATTCATTGGTTATCCAAG+AGG - chr8_1:6832159-6832178 None:intergenic 35.0%
!! AAGGTAATGGATCCAAAAGA+AGG + chr8_1:6832192-6832211 Msa1175490:intron 35.0%
TTCTATGTTCATCCTAGTGA+AGG - chr8_1:6832761-6832780 None:intergenic 35.0%
ATCGCAAGAAAAAAACGGTT+AGG + chr8_1:6832971-6832990 Msa1175490:intron 35.0%
GTTTGTGTAGTACAACTCTT+AGG - chr8_1:6828313-6828332 None:intergenic 35.0%
CAATAGTGAAGTTACTTGCA+TGG + chr8_1:6828363-6828382 Msa1175490:intron 35.0%
! TATCACCTTTGATGATAACC+AGG + chr8_1:6833250-6833269 Msa1175490:intron 35.0%
ACAAACCTGGTTATCATCAA+AGG - chr8_1:6833258-6833277 None:intergenic 35.0%
TATCCTCCAAAATTTCGTAG+AGG + chr8_1:6833341-6833360 Msa1175490:intron 35.0%
TGAAGAGGAAACTGATAGAA+TGG + chr8_1:6833408-6833427 Msa1175490:CDS 35.0%
GATAGAATGGTATGTGATGA+AGG + chr8_1:6833421-6833440 Msa1175490:CDS 35.0%
TAGAATGGTATGTGATGAAG+GGG + chr8_1:6833423-6833442 Msa1175490:CDS 35.0%
TTGAAGGAATTCCTGATGTA+AGG + chr8_1:6833491-6833510 Msa1175490:intron 35.0%
! CATTTTCAGAGATTGAAGAC+TGG - chr8_1:6833682-6833701 None:intergenic 35.0%
! GAAGTATCTTTATCGAACTC+AGG + chr8_1:6833707-6833726 Msa1175490:CDS 35.0%
! GGATTTTATGATTCCGAAAG+TGG + chr8_1:6833728-6833747 Msa1175490:CDS 35.0%
GTAAATCATTCTCAACGACT+CGG - chr8_1:6833900-6833919 None:intergenic 35.0%
ATGATTTACTATGGAAGCAG+TGG + chr8_1:6833911-6833930 Msa1175490:CDS 35.0%
!!! TCTCTAAGTTGAGTTGGTTT+TGG + chr8_1:6834043-6834062 Msa1175490:intron 35.0%
! CAATGTTCTGGATACTTCAA+CGG + chr8_1:6834094-6834113 Msa1175490:CDS 35.0%
GCATCATTTCGAGATGATTT+CGG + chr8_1:6834152-6834171 Msa1175490:CDS 35.0%
CATCATTTCGAGATGATTTC+GGG + chr8_1:6834153-6834172 Msa1175490:CDS 35.0%
ATCATTTCGAGATGATTTCG+GGG + chr8_1:6834154-6834173 Msa1175490:CDS 35.0%
TTGCAATTGATCATCTCTAG+AGG - chr8_1:6834218-6834237 None:intergenic 35.0%
! GTTATTGTTTCTTCGTAGAG+TGG - chr8_1:6834261-6834280 None:intergenic 35.0%
! TGAAGCAGATCTTTTTGACA+TGG - chr8_1:6834309-6834328 None:intergenic 35.0%
ATGTTTGCAAGTTCGAACCT+TGG + chr8_1:6827897-6827916 Msa1175490:CDS 40.0%
TGTTTGCAAGTTCGAACCTT+GGG + chr8_1:6827898-6827917 Msa1175490:CDS 40.0%
! ATTTTACCTGGTAAGTCCCA+AGG - chr8_1:6827917-6827936 None:intergenic 40.0%
TTTGCGTATTTGTAATCGCG+AGG - chr8_1:6828057-6828076 None:intergenic 40.0%
TTTAACAGAAGGACACAGTG+TGG + chr8_1:6828087-6828106 Msa1175490:CDS 40.0%
! TGGTCTTGACCGTAAGATTA+AGG + chr8_1:6828125-6828144 Msa1175490:CDS 40.0%
GACCGTAAGATTAAGGTTAG+AGG + chr8_1:6828132-6828151 Msa1175490:CDS 40.0%
! TTCCTGGTGTTAAAAGCAAC+TGG + chr8_1:6828208-6828227 Msa1175490:CDS 40.0%
! TCCTGGTGTTAAAAGCAACT+GGG + chr8_1:6828209-6828228 Msa1175490:CDS 40.0%
TTTATCACCCTCCAACTTGT+GGG - chr8_1:6828443-6828462 None:intergenic 40.0%
ATTTATCACCCTCCAACTTG+TGG - chr8_1:6828444-6828463 None:intergenic 40.0%
!! AAAATCAGCAAGCTGGTCTT+TGG + chr8_1:6828527-6828546 Msa1175490:intron 40.0%
AGGTAGCAGTTTGAGAATGT+TGG + chr8_1:6828557-6828576 Msa1175490:intron 40.0%
TATTGTACGAGAGAAACTGC+AGG - chr8_1:6828583-6828602 None:intergenic 40.0%
GCAGTTTCTCTCGTACAATA+TGG + chr8_1:6828583-6828602 Msa1175490:intron 40.0%
ACAGTAGATAACAGGAGTCT+TGG + chr8_1:6828680-6828699 Msa1175490:intron 40.0%
CAGCATCATGTGAATTGCAA+TGG - chr8_1:6828743-6828762 None:intergenic 40.0%
! TCTGGTCAGTGCTTCTTTTT+GGG - chr8_1:6828849-6828868 None:intergenic 40.0%
GATACCAGAAGATCTATCTC+TGG - chr8_1:6828867-6828886 None:intergenic 40.0%
! AGGCTTTTCAGATACAGACT+GGG - chr8_1:6828901-6828920 None:intergenic 40.0%
! AAGGCTTTTCAGATACAGAC+TGG - chr8_1:6828902-6828921 None:intergenic 40.0%
AGATACTTGAAAGGATCTCC+AGG - chr8_1:6828966-6828985 None:intergenic 40.0%
ATTCTGATGTTCCTGCTTAC+AGG - chr8_1:6829115-6829134 None:intergenic 40.0%
! GGATCAGAAGGTGTACTAAT+AGG + chr8_1:6829170-6829189 Msa1175490:intron 40.0%
GAAGTTGCTCATTCTTCATC+TGG - chr8_1:6829263-6829282 None:intergenic 40.0%
!! GTTGATGATGTGATCTTAGC+TGG - chr8_1:6829380-6829399 None:intergenic 40.0%
CAAGCAGGAAATGGTATGAA+AGG - chr8_1:6829505-6829524 None:intergenic 40.0%
ACTTGATTGGGATTGGAATG+TGG + chr8_1:6829563-6829582 Msa1175490:intron 40.0%
GAGATGCCAATTATGCATAG+AGG + chr8_1:6829664-6829683 Msa1175490:intron 40.0%
CTTTGGCCTCTATGCATAAT+TGG - chr8_1:6829673-6829692 None:intergenic 40.0%
AGTCAGGATTGTTCTTGCTT+TGG - chr8_1:6829690-6829709 None:intergenic 40.0%
! AGAGAGGTATAAAGCCAGAT+TGG - chr8_1:6829786-6829805 None:intergenic 40.0%
!! TCTGGCTTTATACCTCTCTA+TGG + chr8_1:6829787-6829806 Msa1175490:intron 40.0%
CTTGAGTAAGACTGGTACTT+GGG - chr8_1:6829891-6829910 None:intergenic 40.0%
CTTAATGCCTTGAGTAAGAC+TGG - chr8_1:6829899-6829918 None:intergenic 40.0%
ATGCTTGTTTGCTTCAGTGA+AGG + chr8_1:6829949-6829968 Msa1175490:intron 40.0%
ATTTAGGCTCAGATTGAGTG+TGG + chr8_1:6829972-6829991 Msa1175490:intron 40.0%
ATCTTGTAAATAAGCAGGGG+TGG + chr8_1:6830108-6830127 Msa1175490:intron 40.0%
! AGCAGAAGATTCAGAAGTGT+TGG + chr8_1:6830189-6830208 Msa1175490:intron 40.0%
!! GCAGAAGATTCAGAAGTGTT+GGG + chr8_1:6830190-6830209 Msa1175490:intron 40.0%
TGGTGTAGAAATAGGAGAAG+TGG + chr8_1:6830243-6830262 Msa1175490:intron 40.0%
GGTGTAGAAATAGGAGAAGT+GGG + chr8_1:6830244-6830263 Msa1175490:intron 40.0%
GGGTCAAGATCATCAACAAA+AGG + chr8_1:6830277-6830296 Msa1175490:intron 40.0%
GATATAGTGCCAGGTATCAA+TGG + chr8_1:6830315-6830334 Msa1175490:intron 40.0%
GGCTATAAACCTGGTTACAA+AGG - chr8_1:6830442-6830461 None:intergenic 40.0%
CATCTACTATCCAATCTCAC+AGG - chr8_1:6830504-6830523 None:intergenic 40.0%
! GGAGATTTATGATGGAGAAG+TGG + chr8_1:6830592-6830611 Msa1175490:intron 40.0%
! TTTATGATGGAGAAGTGGAG+TGG + chr8_1:6830597-6830616 Msa1175490:intron 40.0%
! TCTACTCTAGCATTTTGCTG+AGG + chr8_1:6830736-6830755 Msa1175490:intron 40.0%
ATGAATAGACACCTCAGCTT+TGG + chr8_1:6830900-6830919 Msa1175490:intron 40.0%
CACTTTGGCACTTTAGATTG+GGG - chr8_1:6831191-6831210 None:intergenic 40.0%
GCACTTTGGCACTTTAGATT+GGG - chr8_1:6831192-6831211 None:intergenic 40.0%
TGCACTTTGGCACTTTAGAT+TGG - chr8_1:6831193-6831212 None:intergenic 40.0%
! AAGTGCCAAAGTGCAGTTTT+AGG + chr8_1:6831198-6831217 Msa1175490:intron 40.0%
TACATGATCTGATTACCCAC+AGG - chr8_1:6831380-6831399 None:intergenic 40.0%
AACAGTACCAGCATGATGTA+TGG + chr8_1:6831530-6831549 Msa1175490:intron 40.0%
! ACAGTTGATATACCTGAAGG+AGG + chr8_1:6831699-6831718 Msa1175490:intron 40.0%
TTGTCAACTGCAGAATTCAC+AGG + chr8_1:6831873-6831892 Msa1175490:intron 40.0%
!! GCATTAGTAGCATTTGCTGT+AGG + chr8_1:6831921-6831940 Msa1175490:intron 40.0%
!! AGTAGCATTTGCTGTAGGAT+TGG + chr8_1:6831926-6831945 Msa1175490:intron 40.0%
CAAACGTACAAACCATACTG+TGG - chr8_1:6831994-6832013 None:intergenic 40.0%
CTGGTTCCAAGAATAACTCT+AGG - chr8_1:6832031-6832050 None:intergenic 40.0%
!! CTTGAGTCTTCTGAAACAGA+GGG + chr8_1:6832107-6832126 Msa1175490:intron 40.0%
! CAAGTCTCAAGTCCTTCTTT+TGG - chr8_1:6832207-6832226 None:intergenic 40.0%
GGAAAAGGACAAGTGCAATT+AGG + chr8_1:6832323-6832342 Msa1175490:intron 40.0%
! GCAATCATCTGGTTTATTCG+TGG - chr8_1:6832574-6832593 None:intergenic 40.0%
CGGTTCAAATCATCAAGATC+AGG + chr8_1:6832611-6832630 Msa1175490:intron 40.0%
GTAGTTACTCCACTTCTTAC+TGG - chr8_1:6832725-6832744 None:intergenic 40.0%
! AGTCCTCTACGAAATTTTGG+AGG - chr8_1:6833347-6833366 None:intergenic 40.0%
TTCCTCTTCAGCTTTCTTCT+CGG - chr8_1:6833398-6833417 None:intergenic 40.0%
TGATGAGGTTCCTGAAACAT+TGG - chr8_1:6833629-6833648 None:intergenic 40.0%
AATGTTTCAGGAACCTCATC+AGG + chr8_1:6833628-6833647 Msa1175490:CDS 40.0%
! AAGTACTTTTCAGCCTGATG+AGG - chr8_1:6833644-6833663 None:intergenic 40.0%
CATATCGATGTGTCCACTTT+CGG - chr8_1:6833744-6833763 None:intergenic 40.0%
! TGCTGAATTAGTCTCTATGC+CGG + chr8_1:6833940-6833959 Msa1175490:CDS 40.0%
TTTACAGTGTGGCAATGTTC+TGG + chr8_1:6834082-6834101 Msa1175490:intron 40.0%
CTTCTTGAACATCCTAGTTC+AGG + chr8_1:6834119-6834138 Msa1175490:CDS 40.0%
TCATTTCGAGATGATTTCGG+GGG + chr8_1:6834155-6834174 Msa1175490:CDS 40.0%
! TTGTTTCTTCGTAGAGTGGA+AGG - chr8_1:6834257-6834276 None:intergenic 40.0%
! AGATCTTTTTGACATGGTGG+TGG - chr8_1:6834303-6834322 None:intergenic 40.0%
! AGCAGATCTTTTTGACATGG+TGG - chr8_1:6834306-6834325 None:intergenic 40.0%
GGTTGGAATCTGAATCCAAC+AGG - chr8_1:6827791-6827810 None:intergenic 45.0%
CAAGCTCTTCATCTGTTGGT+TGG - chr8_1:6827808-6827827 None:intergenic 45.0%
AATCTTACGGTCAAGACCAG+TGG - chr8_1:6828124-6828143 None:intergenic 45.0%
!!! ACCCAGTTGCTTTTAACACC+AGG - chr8_1:6828213-6828232 None:intergenic 45.0%
TTATCACCCTCCAACTTGTG+GGG - chr8_1:6828442-6828461 None:intergenic 45.0%
!! AGCTGGTCTTTGGAAGAGAT+AGG + chr8_1:6828537-6828556 Msa1175490:intron 45.0%
TTAGTGCGCTCATGAAACAC+AGG + chr8_1:6828624-6828643 Msa1175490:intron 45.0%
TGAGGCTGAGTATAGAGCTT+TGG - chr8_1:6828769-6828788 None:intergenic 45.0%
TCTATACTCAGCCTCAGAAG+AGG + chr8_1:6828773-6828792 Msa1175490:intron 45.0%
TGTCAGCAAATCCTCTTCTG+AGG - chr8_1:6828787-6828806 None:intergenic 45.0%
! CTCTGGTCAGTGCTTCTTTT+TGG - chr8_1:6828850-6828869 None:intergenic 45.0%
CTGACCAGAGATAGATCTTC+TGG + chr8_1:6828860-6828879 Msa1175490:intron 45.0%
! TTTTCAGATACAGACTGGGC+AGG - chr8_1:6828897-6828916 None:intergenic 45.0%
GATGAATGTGATATCTGGCC+TGG + chr8_1:6829055-6829074 Msa1175490:intron 45.0%
CCTGCTTACAGGAGATTGAT+TGG - chr8_1:6829104-6829123 None:intergenic 45.0%
CCAATCAATCTCCTGTAAGC+AGG + chr8_1:6829101-6829120 Msa1175490:intron 45.0%
GATCTTAGCTGGGAACTCTT+TGG - chr8_1:6829369-6829388 None:intergenic 45.0%
TGAAGCAAGCAAGCAGGAAA+TGG - chr8_1:6829514-6829533 None:intergenic 45.0%
! ATGGATTGAAGCAAGCAAGC+AGG - chr8_1:6829520-6829539 None:intergenic 45.0%
AGCAAGAACAATCCTGACTG+TGG + chr8_1:6829691-6829710 Msa1175490:intron 45.0%
ATATCCCTTGGCAACCAATC+TGG + chr8_1:6829769-6829788 Msa1175490:intron 45.0%
! AAAGCCAGATTGGTTGCCAA+GGG - chr8_1:6829776-6829795 None:intergenic 45.0%
! TAAAGCCAGATTGGTTGCCA+AGG - chr8_1:6829777-6829796 None:intergenic 45.0%
ATGCTGATGGTTCCATAGAG+AGG - chr8_1:6829802-6829821 None:intergenic 45.0%
ATGTTAAACCCATAGGCTGC+AGG - chr8_1:6829847-6829866 None:intergenic 45.0%
CAGCCTATGGGTTTAACATG+AGG + chr8_1:6829848-6829867 Msa1175490:intron 45.0%
CCACCTCATGTTAAACCCAT+AGG - chr8_1:6829854-6829873 None:intergenic 45.0%
CCTATGGGTTTAACATGAGG+TGG + chr8_1:6829851-6829870 Msa1175490:intron 45.0%
TGGGTTTAACATGAGGTGGA+AGG + chr8_1:6829855-6829874 Msa1175490:intron 45.0%
CCTTGAGTAAGACTGGTACT+TGG - chr8_1:6829892-6829911 None:intergenic 45.0%
CCAAGTACCAGTCTTACTCA+AGG + chr8_1:6829889-6829908 Msa1175490:intron 45.0%
AGTCTAGTAGAGACTCTGAC+AGG + chr8_1:6830136-6830155 Msa1175490:intron 45.0%
ACAGGTGGAGGAGCAATAAT+AGG + chr8_1:6830154-6830173 Msa1175490:intron 45.0%
GGTGAATTGAGTGAACCATG+AGG + chr8_1:6830211-6830230 Msa1175490:intron 45.0%
GAACCATGAGGTGAATCTTC+TGG + chr8_1:6830223-6830242 Msa1175490:intron 45.0%
ACACCAGAAGATTCACCTCA+TGG - chr8_1:6830229-6830248 None:intergenic 45.0%
GAAATAGGAGAAGTGGGAAG+AGG + chr8_1:6830250-6830269 Msa1175490:intron 45.0%
CTACTTCTGCCATTGATACC+TGG - chr8_1:6830327-6830346 None:intergenic 45.0%
CAGGTATCAATGGCAGAAGT+AGG + chr8_1:6830325-6830344 Msa1175490:intron 45.0%
ATCAATGGCAGAAGTAGGAG+TGG + chr8_1:6830330-6830349 Msa1175490:intron 45.0%
CCAAACTTCAACCTAGAGCA+AGG - chr8_1:6830480-6830499 None:intergenic 45.0%
! CCTTGCTCTAGGTTGAAGTT+TGG + chr8_1:6830477-6830496 Msa1175490:intron 45.0%
GAAGTTTGGTCCTGTGAGAT+TGG + chr8_1:6830491-6830510 Msa1175490:intron 45.0%
CAGGGCCATTATCACTTCTA+AGG + chr8_1:6830824-6830843 Msa1175490:intron 45.0%
!! ATTGGTTTGGCTGATCCTCA+TGG - chr8_1:6831354-6831373 None:intergenic 45.0%
AGCCAAACCAATCATCCTGT+GGG + chr8_1:6831362-6831381 Msa1175490:intron 45.0%
! TACCCACAGGATGATTGGTT+TGG - chr8_1:6831367-6831386 None:intergenic 45.0%
CTGATTACCCACAGGATGAT+TGG - chr8_1:6831372-6831391 None:intergenic 45.0%
ACCAGAGGAAGAAGGGAAAT+TGG + chr8_1:6831725-6831744 Msa1175490:intron 45.0%
CCAGAGGAAGAAGGGAAATT+GGG + chr8_1:6831726-6831745 Msa1175490:intron 45.0%
GTTGACAATTCTCCTCCTAC+TGG - chr8_1:6831861-6831880 None:intergenic 45.0%
!! GCTTGAGTCTTCTGAAACAG+AGG + chr8_1:6832106-6832125 Msa1175490:intron 45.0%
CAGATCTCATAGCTTCACAC+CGG + chr8_1:6832297-6832316 Msa1175490:intron 45.0%
GGACAAGTGCAATTAGGCAT+TGG + chr8_1:6832329-6832348 Msa1175490:intron 45.0%
GAGTTCATCCCAAACGTCAA+TGG + chr8_1:6832493-6832512 Msa1175490:intron 45.0%
TGATTTGAACCGTGATGCGT+GGG - chr8_1:6832603-6832622 None:intergenic 45.0%
ATGATTTGAACCGTGATGCG+TGG - chr8_1:6832604-6832623 None:intergenic 45.0%
CTGGTTCAAATTACCTCGCA+TGG - chr8_1:6832706-6832725 None:intergenic 45.0%
GGAGTAACTACCACAGAGTT+TGG + chr8_1:6832734-6832753 Msa1175490:intron 45.0%
TAGTGAAGGTCCAAACTCTG+TGG - chr8_1:6832747-6832766 None:intergenic 45.0%
ACAGAGTTTGGACCTTCACT+AGG + chr8_1:6832746-6832765 Msa1175490:intron 45.0%
CCAGAGAAGATGAATTGCAG+CGG + chr8_1:6832922-6832941 Msa1175490:intron 45.0%
TCGGAACTCATGTGTCTACT+TGG - chr8_1:6833451-6833470 None:intergenic 45.0%
GAAGACTGGTATGTCGAGAA+AGG - chr8_1:6833668-6833687 None:intergenic 45.0%
GCATAGTATTCGCCTGAACT+AGG - chr8_1:6834134-6834153 None:intergenic 45.0%
AGATGATTTCGGGGGATTTG+AGG + chr8_1:6834163-6834182 Msa1175490:CDS 45.0%
!! TGGTTGGTCTTGGATGATAC+TGG - chr8_1:6834283-6834302 None:intergenic 45.0%
!!! CTTTTTGACATGGTGGTGGT+TGG - chr8_1:6834299-6834318 None:intergenic 45.0%
TTCGAACCTTGGGACTTACC+AGG + chr8_1:6827908-6827927 Msa1175490:CDS 50.0%
GAAGGACACAGTGTGGATAC+TGG + chr8_1:6828094-6828113 Msa1175490:CDS 50.0%
TGTGGATACTGGAAAGCCAC+TGG + chr8_1:6828105-6828124 Msa1175490:CDS 50.0%
TATCACCCTCCAACTTGTGG+GGG - chr8_1:6828441-6828460 None:intergenic 50.0%
GAGTTGCTTCTTTGTCCTCC+AGG + chr8_1:6828809-6828828 Msa1175490:intron 50.0%
GCAAGTCACTCATTTCCTGG+AGG - chr8_1:6828827-6828846 None:intergenic 50.0%
TGGGCAAGTCACTCATTTCC+TGG - chr8_1:6828830-6828849 None:intergenic 50.0%
TTGAAAGGATCTCCAGGTCG+TGG - chr8_1:6828960-6828979 None:intergenic 50.0%
GAATGTGATATCTGGCCTGG+TGG + chr8_1:6829058-6829077 Msa1175490:intron 50.0%
CTTAGCTGGGAACTCTTTGG+AGG - chr8_1:6829366-6829385 None:intergenic 50.0%
GGATTGGAATGTGGAACACC+AGG + chr8_1:6829572-6829591 Msa1175490:intron 50.0%
TTGGAATGTGGAACACCAGG+AGG + chr8_1:6829575-6829594 Msa1175490:intron 50.0%
TGGCTAAGCTTACCACAGTC+AGG - chr8_1:6829706-6829725 None:intergenic 50.0%
ACTGTGGTAAGCTTAGCCAC+TGG + chr8_1:6829707-6829726 Msa1175490:intron 50.0%
TAAACCCACCTGCAGCCTAT+GGG + chr8_1:6829836-6829855 Msa1175490:intron 50.0%
TAAACCCATAGGCTGCAGGT+GGG - chr8_1:6829843-6829862 None:intergenic 50.0%
TTAAACCCATAGGCTGCAGG+TGG - chr8_1:6829844-6829863 None:intergenic 50.0%
CTAGTAGAGACTCTGACAGG+TGG + chr8_1:6830139-6830158 Msa1175490:intron 50.0%
TAGGAGAAGTGGGAAGAGGT+AGG + chr8_1:6830254-6830273 Msa1175490:intron 50.0%
AGGAGAAGTGGGAAGAGGTA+GGG + chr8_1:6830255-6830274 Msa1175490:intron 50.0%
TGAGGGAGTGATATAGTGCC+AGG + chr8_1:6830306-6830325 Msa1175490:intron 50.0%
ATGGCAGAAGTAGGAGTGGA+AGG + chr8_1:6830334-6830353 Msa1175490:intron 50.0%
GTAGGAGTGGAAGGCTGATA+AGG + chr8_1:6830343-6830362 Msa1175490:intron 50.0%
CAGCCAAACCAATCATCCTG+TGG + chr8_1:6831361-6831380 Msa1175490:intron 50.0%
!! GAGGAGTACCAGAGGAAGAA+GGG + chr8_1:6831718-6831737 Msa1175490:intron 50.0%
CCCAATTTCCCTTCTTCCTC+TGG - chr8_1:6831729-6831748 None:intergenic 50.0%
TGCTCCTGAGTCAAACCAGT+AGG + chr8_1:6831843-6831862 Msa1175490:intron 50.0%
TCCTGAGTCAAACCAGTAGG+AGG + chr8_1:6831846-6831865 Msa1175490:intron 50.0%
!! TCCTCCTACTGGTTTGACTC+AGG - chr8_1:6831850-6831869 None:intergenic 50.0%
! GCACTTGTCCTTTTCCATGC+CGG - chr8_1:6832319-6832338 None:intergenic 50.0%
TGAGCACGCCATTGACGTTT+GGG - chr8_1:6832504-6832523 None:intergenic 50.0%
ATGAGCACGCCATTGACGTT+TGG - chr8_1:6832505-6832524 None:intergenic 50.0%
GTGGGAACTGTGCAATCATC+TGG - chr8_1:6832585-6832604 None:intergenic 50.0%
AGATCCATGCAACGTGCACT+TGG - chr8_1:6832680-6832699 None:intergenic 50.0%
CCGCTGCAATTCATCTTCTC+TGG - chr8_1:6832925-6832944 None:intergenic 50.0%
AGCCGAGAAGAAAGCTGAAG+AGG + chr8_1:6833393-6833412 Msa1175490:CDS 50.0%
! TCATTCTCAACGACTCGGAC+TGG - chr8_1:6833895-6833914 None:intergenic 50.0%
TGCAATAGCCCCCCACAAGT+TGG + chr8_1:6828429-6828448 Msa1175490:intron 55.0%
! AATAGCCCCCCACAAGTTGG+AGG + chr8_1:6828432-6828451 Msa1175490:intron 55.0%
! ATAGCCCCCCACAAGTTGGA+GGG + chr8_1:6828433-6828452 Msa1175490:intron 55.0%
ATCACCCTCCAACTTGTGGG+GGG - chr8_1:6828440-6828459 None:intergenic 55.0%
GGGAAGAAGATACCACGACC+TGG + chr8_1:6828945-6828964 Msa1175490:intron 55.0%
GTAAACCCACCTGCAGCCTA+TGG + chr8_1:6829835-6829854 Msa1175490:intron 55.0%
GTAGAGACTCTGACAGGTGG+AGG + chr8_1:6830142-6830161 Msa1175490:intron 55.0%
GGAGAAGTGGGAAGAGGTAG+GGG + chr8_1:6830256-6830275 Msa1175490:intron 55.0%
GAGAAGTGGGAAGAGGTAGG+GGG + chr8_1:6830257-6830276 Msa1175490:intron 55.0%
GGTTTGGCTGATCCTCATGG+TGG - chr8_1:6831351-6831370 None:intergenic 55.0%
!! ACCTGAAGGAGGAGTACCAG+AGG + chr8_1:6831710-6831729 Msa1175490:intron 55.0%
TCCTCTGGTACTCCTCCTTC+AGG - chr8_1:6831714-6831733 None:intergenic 55.0%
!! GGAGGAGTACCAGAGGAAGA+AGG + chr8_1:6831717-6831736 Msa1175490:intron 55.0%
CTCATAGCTTCACACCGGCA+TGG + chr8_1:6832302-6832321 Msa1175490:intron 55.0%
GCTTCACACCGGCATGGAAA+AGG + chr8_1:6832308-6832327 Msa1175490:intron 55.0%
TGCACAGTTCCCACGCATCA+CGG + chr8_1:6832591-6832610 Msa1175490:intron 55.0%
GCATGGATCTACTCCATGCG+AGG + chr8_1:6832690-6832709 Msa1175490:intron 55.0%
!! GACATGGTGGTGGTTGGTCT+TGG - chr8_1:6834293-6834312 None:intergenic 55.0%
ATCTGCACGCGCGCATCGTA+TGG - chr8_1:6832282-6832301 None:intergenic 60.0%
! CTCGGACTGGACAGGAAAGC+TGG - chr8_1:6833882-6833901 None:intergenic 60.0%
! CTCAACGACTCGGACTGGAC+AGG - chr8_1:6833890-6833909 None:intergenic 60.0%
TGCACGCGCGCATCGTATGG+AGG - chr8_1:6832279-6832298 None:intergenic 65.0%
CGCGCCAAGTGCACGTTGCA+TGG + chr8_1:6832673-6832692 Msa1175490:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 6827773 6834346 6827773 ID=Msa1175490;Name=Msa1175490
chr8_1 mRNA 6827773 6834346 6827773 ID=Msa1175490-mRNA-1;Parent=Msa1175490;Name=Msa1175490-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0.4|0|1|0.6|0.5|6|0|383
chr8_1 exon 6827773 6827929 6827773 ID=Msa1175490-mRNA-1:exon:2470;Parent=Msa1175490-mRNA-1
chr8_1 exon 6828007 6828230 6828007 ID=Msa1175490-mRNA-1:exon:2471;Parent=Msa1175490-mRNA-1
chr8_1 exon 6833361 6833507 6833361 ID=Msa1175490-mRNA-1:exon:2472;Parent=Msa1175490-mRNA-1
chr8_1 exon 6833590 6833832 6833590 ID=Msa1175490-mRNA-1:exon:2473;Parent=Msa1175490-mRNA-1
chr8_1 exon 6833839 6833961 6833839 ID=Msa1175490-mRNA-1:exon:2474;Parent=Msa1175490-mRNA-1
chr8_1 exon 6834089 6834346 6834089 ID=Msa1175490-mRNA-1:exon:2475;Parent=Msa1175490-mRNA-1
chr8_1 CDS 6827773 6827929 6827773 ID=Msa1175490-mRNA-1:cds;Parent=Msa1175490-mRNA-1
chr8_1 CDS 6828007 6828230 6828007 ID=Msa1175490-mRNA-1:cds;Parent=Msa1175490-mRNA-1
chr8_1 CDS 6833361 6833507 6833361 ID=Msa1175490-mRNA-1:cds;Parent=Msa1175490-mRNA-1
chr8_1 CDS 6833590 6833832 6833590 ID=Msa1175490-mRNA-1:cds;Parent=Msa1175490-mRNA-1
chr8_1 CDS 6833839 6833961 6833839 ID=Msa1175490-mRNA-1:cds;Parent=Msa1175490-mRNA-1
chr8_1 CDS 6834089 6834346 6834089 ID=Msa1175490-mRNA-1:cds;Parent=Msa1175490-mRNA-1
Gene Sequence

>Msa1175490

ATGACAAACTCATTTCCTGTTGGATTCAGATTCCAACCAACAGATGAAGAGCTTGTAAACCACTATCTCAAAAACAAGTTACTTGGTAATGATTCCACTGTCAACAATGTTATAGCTGAAGTTGATGTTTGCAAGTTCGAACCTTGGGACTTACCAGCTTGTTCAATCATAAAATCCGATGATCCAGAATGGTTTTTCTTTTGTCCTCGCGATTACAAATACGCAAATAGTAAAAGGTTTAACAGAAGGACACAGTGTGGATACTGGAAAGCCACTGGTCTTGACCGTAAGATTAAGGTTAGAGGTACAGACAATGTTATTGGGACAAAGAAAACACTTGTGTACTATAATGGTTGTGTTCCTGGTGTTAAAAGCAACTGGAGGACTTTTGTTTTGTGTCACTTGATGAAGAAAGCCGAGAAGAAAGCTGAAGAGGAAACTGATAGAATGGTATGTGATGAAGGGGAGCCAAGTAGACACATGAGTTCCGATCACGAAAATCAAGAAACAGTTGAAGGAATTCCTGATGTAATAAGTGGTACCTTGCCAGAAAATAATATGGAACCAATGTTTCAGGAACCTCATCAGGCTGAAAAGTACTTTCCTTTCTCGACATACCAGTCTTCAATCTCTGAAAATGAGATGGAAGTATCTTTATCGAACTCAGGATTTTATGATTCCGAAAGTGGACACATCGATATGCAGAGTTTTTTTGAAACTATGGAAGAGGAAAATCAGTTCATCAATTCAATGTTAAATGACGGATATTTTGATAATGATATGTATAGCGAACAAAGAAGACACACTTTTGCCAGCTTTCCTGTCCAGTCCGAGTCGTTGAGAATGATTTACTATGGAAGCAGTGGCACAAATGCTGAATTAGTCTCTATGCCGTGTGGCAATGTTCTGGATACTTCAACGGCGCTTCTTGAACATCCTAGTTCAGGCGAATACTATGCATCATTTCGAGATGATTTCGGGGGATTTGAGGCATCATCTTGTGATTCAACTGCAGATAAACCTCTAGAGATGATCAATTGCAATGAAATTTCTAGTGCACCTTCCACTCTACGAAGAAACAATAACCAGTATCATCCAAGACCAACCACCACCATGTCAAAAAGATCTGCTTCAAGACGATCTCAAACATAG
Protein sequence

>Msa1175490

MTNSFPVGFRFQPTDEELVNHYLKNKLLGNDSTVNNVIAEVDVCKFEPWDLPACSIIKSDDPEWFFFCPRDYKYANSKRFNRRTQCGYWKATGLDRKIKVRGTDNVIGTKKTLVYYNGCVPGVKSNWRTFVLCHLMKKAEKKAEEETDRMVCDEGEPSRHMSSDHENQETVEGIPDVISGTLPENNMEPMFQEPHQAEKYFPFSTYQSSISENEMEVSLSNSGFYDSESGHIDMQSFFETMEEENQFINSMLNDGYFDNDMYSEQRRHTFASFPVQSESLRMIYYGSSGTNAELVSMPCGNVLDTSTALLEHPSSGEYYASFRDDFGGFEASSCDSTADKPLEMINCNEISSAPSTLRRNNNQYHPRPTTTMSKRSASRRSQT*