AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1307450

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1307450 MtrunA17_Chr8g0345671 84.615 403 39 3 1 383 1 400 0.0 671
Msa1307450 MtrunA17_Chr8g0345691 62.884 423 94 6 6 381 13 419 5.64e-172 486
Msa1307450 MtrunA17_Chr8g0345711 67.164 134 37 1 1 127 1 134 7.03e-60 191
Msa1307450 MtrunA17_Chr8g0345731 69.531 128 32 2 5 127 24 149 2.45e-59 190
Msa1307450 MtrunA17_Chr8g0345721 58.385 161 33 2 1 127 26 186 1.93e-56 184
Msa1307450 MtrunA17_Chr8g0345741 71.429 112 32 0 16 127 2 113 2.80e-53 174
Msa1307450 MtrunA17_Chr5g0428991 36.223 323 149 11 3 292 23 321 1.67e-46 168
Msa1307450 MtrunA17_Chr3g0128111 50.296 169 57 6 8 156 45 206 1.26e-45 157
Msa1307450 MtrunA17_Chr3g0128151 51.235 162 56 5 3 144 20 178 1.72e-45 164
Msa1307450 MtrunA17_Chr8g0345701 55.714 140 46 4 2 127 4 141 4.39e-43 148
Msa1307450 MtrunA17_Chr5g0400461 45.455 165 67 4 4 146 5 168 4.50e-38 139
Msa1307450 MtrunA17_Chr6g0481091 48.966 145 66 4 4 147 5 142 8.94e-38 136
Msa1307450 MtrunA17_Chr2g0309891 53.600 125 54 3 4 127 5 126 2.37e-37 138
Msa1307450 MtrunA17_Chr3g0109821 42.077 183 82 4 4 165 5 184 4.16e-37 142
Msa1307450 MtrunA17_Chr5g0433781 54.400 125 53 3 4 127 5 126 1.50e-36 140
Msa1307450 MtrunA17_Chr4g0054791 42.021 188 85 5 4 170 5 189 4.44e-36 134
Msa1307450 MtrunA17_Chr2g0318101 46.053 152 72 5 5 155 15 157 2.96e-35 132
Msa1307450 MtrunA17_Chr1g0197361 46.358 151 60 3 8 139 11 159 1.08e-34 134
Msa1307450 MtrunA17_Chr7g0252971 48.855 131 56 4 5 127 8 135 2.41e-34 129
Msa1307450 MtrunA17_Chr4g0047841 50.806 124 57 3 5 127 15 135 3.51e-33 126
Msa1307450 MtrunA17_Chr3g0130731 47.020 151 71 5 5 152 7 151 1.39e-32 124
Msa1307450 MtrunA17_Chr2g0326361 48.800 125 60 3 4 127 13 134 1.73e-32 124
Msa1307450 MtrunA17_Chr8g0361731 49.587 121 57 3 8 127 17 134 6.42e-32 124
Msa1307450 MtrunA17_Chr2g0316971 52.419 124 55 3 5 127 23 143 8.25e-32 124
Msa1307450 MtrunA17_Chr3g0091921 52.419 124 53 5 5 127 16 134 1.06e-31 121
Msa1307450 MtrunA17_Chr4g0060931 50.806 124 55 5 5 127 17 135 2.04e-31 122
Msa1307450 MtrunA17_Chr8g0364791 46.281 121 61 3 8 127 9 126 2.15e-31 124
Msa1307450 MtrunA17_Chr3g0130101 48.760 121 58 3 8 127 10 127 3.51e-31 121
Msa1307450 MtrunA17_Chr7g0217721 54.032 124 51 5 5 127 19 137 3.90e-31 121
Msa1307450 MtrunA17_Chr8g0384721 49.194 124 56 4 5 127 7 124 5.09e-31 119
Msa1307450 MtrunA17_Chr8g0385991 48.387 124 58 3 5 127 14 132 5.26e-31 117
Msa1307450 MtrunA17_Chr2g0318081 35.391 243 123 10 4 226 15 243 6.37e-31 120
Msa1307450 MtrunA17_Chr4g0042561 48.819 127 59 4 2 127 6 127 6.73e-31 119
Msa1307450 MtrunA17_Chr7g0217711 52.419 124 53 5 5 127 19 137 8.43e-31 115
Msa1307450 MtrunA17_Chr3g0124761 50.000 124 55 4 5 127 7 124 9.16e-31 119
Msa1307450 MtrunA17_Chr6g0453451 46.939 147 64 5 5 142 20 161 1.30e-30 119
Msa1307450 MtrunA17_Chr4g0026141 47.727 132 63 4 1 128 1 130 1.43e-30 117
Msa1307450 MtrunA17_Chr7g0214071 40.606 165 74 4 5 151 15 173 1.96e-30 117
Msa1307450 MtrunA17_Chr1g0201021 52.066 121 54 3 8 127 22 139 2.69e-30 122
Msa1307450 MtrunA17_Chr6g0484441 48.438 128 60 4 1 127 1 123 3.37e-30 118
Msa1307450 MtrunA17_Chr3g0092671 52.066 121 55 2 8 127 8 126 3.70e-30 121
Msa1307450 MtrunA17_Chr5g0398971 48.387 124 60 4 6 127 8 129 4.33e-30 118
Msa1307450 MtrunA17_Chr7g0253011 40.212 189 98 7 2 187 14 190 6.15e-30 118
Msa1307450 MtrunA17_Chr5g0417001 47.107 121 60 3 8 127 17 134 6.27e-30 119
Msa1307450 MtrunA17_Chr6g0453131 49.587 121 56 4 8 127 18 134 7.51e-30 118
Msa1307450 MtrunA17_Chr1g0147421 47.200 125 63 2 4 127 26 148 8.87e-30 117
Msa1307450 MtrunA17_Chr6g0461661 45.968 124 63 3 5 127 18 138 9.08e-30 118
Msa1307450 MtrunA17_Chr3g0139331 43.506 154 66 5 4 139 10 160 1.04e-29 117
Msa1307450 MtrunA17_Chr1g0197351 51.200 125 57 3 4 127 41 162 1.13e-29 119
Msa1307450 MtrunA17_Chr2g0321741 41.667 156 74 5 26 168 13 164 1.28e-29 117
Msa1307450 MtrunA17_Chr4g0076731 48.780 123 54 5 8 127 57 173 1.59e-29 118
Msa1307450 MtrunA17_Chr4g0018391 48.387 124 59 4 6 127 8 128 1.62e-29 117
Msa1307450 MtrunA17_Chr8g0359921 42.763 152 79 5 4 152 13 159 2.52e-29 115
Msa1307450 MtrunA17_Chr1g0183741 37.838 185 101 7 4 183 9 184 2.60e-29 114
Msa1307450 MtrunA17_Chr7g0261411 40.667 150 81 4 4 152 9 151 4.14e-29 114
Msa1307450 MtrunA17_Chr7g0263931 45.161 124 64 3 5 127 11 131 6.27e-29 114
Msa1307450 MtrunA17_Chr8g0384201 45.455 121 62 3 8 127 9 126 1.12e-28 116
Msa1307450 MtrunA17_Chr2g0311661 47.154 123 60 4 8 127 24 144 1.26e-28 113
Msa1307450 MtrunA17_Chr8g0372121 44.186 129 67 4 1 127 2 127 2.16e-28 113
Msa1307450 MtrunA17_Chr2g0311651 46.341 123 61 4 8 127 25 145 2.77e-28 112
Msa1307450 MtrunA17_Chr2g0312321 47.581 124 57 4 5 127 11 127 2.91e-28 112
Msa1307450 MtrunA17_Chr5g0417791 48.387 124 58 5 5 127 3 121 3.02e-28 111
Msa1307450 MtrunA17_Chr4g0017921 49.194 124 58 4 6 127 9 129 3.94e-28 113
Msa1307450 MtrunA17_Chr5g0405211 44.961 129 66 4 1 127 4 129 4.22e-28 113
Msa1307450 MtrunA17_Chr4g0056541 46.774 124 61 4 6 127 8 128 4.43e-28 113
Msa1307450 MtrunA17_Chr4g0038751 32.766 235 124 9 8 214 18 246 6.40e-28 111
Msa1307450 MtrunA17_Chr3g0144271 45.968 124 64 2 5 127 23 144 9.42e-28 113
Msa1307450 MtrunA17_Chr1g0200561 40.000 155 84 6 1 152 15 163 1.20e-27 111
Msa1307450 MtrunA17_Chr2g0309331 37.572 173 81 6 4 151 9 179 9.22e-27 109
Msa1307450 MtrunA17_Chr5g0442771 46.721 122 60 4 8 127 21 139 2.18e-26 107
Msa1307450 MtrunA17_Chr2g0321631 44.094 127 66 4 6 128 5 130 5.85e-26 104
Msa1307450 MtrunA17_Chr8g0346001 45.161 124 63 4 6 127 16 136 5.97e-25 105
Msa1307450 MtrunA17_Chr3g0131911 42.857 126 64 4 5 127 14 134 2.84e-24 100
Msa1307450 MtrunA17_Chr7g0266701 40.458 131 71 5 3 128 2 130 3.43e-21 92.0
Msa1307450 MtrunA17_Chr3g0113001 49.315 73 34 3 56 127 13 83 8.49e-15 74.3
Msa1307450 MtrunA17_Chr4g0050701 33.333 126 68 5 5 127 11 123 6.79e-14 69.7
Msa1307450 MtrunA17_Chr7g0243371 41.772 79 44 2 51 127 6 84 2.28e-13 66.2
Msa1307450 MtrunA17_Chr3g0113011 64.000 50 17 1 4 53 18 66 8.15e-13 63.2
Msa1307450 MtrunA17_Chr8g0384351 30.769 156 73 6 5 145 10 145 2.14e-12 65.5
Msa1307450 MtrunA17_Chr3g0130321 34.188 117 68 3 2 118 4 111 3.56e-11 62.4
Msa1307450 MtrunA17_Chr3g0113041 56.604 53 22 1 5 57 19 70 9.32e-11 57.4
Msa1307450 MtrunA17_Chr1g0194791 57.778 45 19 0 8 52 49 93 9.96e-11 58.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1307450 AT4G35580.3 53.750 160 51 4 4 143 8 164 3.40e-49 174
Msa1307450 AT4G35580.2 53.750 160 51 4 4 143 8 164 3.53e-49 174
Msa1307450 AT4G35580.1 53.750 160 51 4 4 143 8 164 5.16e-49 173
Msa1307450 AT1G33060.1 60.800 125 45 3 4 127 23 144 9.01e-46 166
Msa1307450 AT1G33060.2 60.800 125 45 3 4 127 23 144 1.01e-45 166
Msa1307450 AT3G49530.2 48.171 164 63 4 3 146 11 172 2.12e-44 158
Msa1307450 AT3G49530.1 48.171 164 63 4 3 146 11 172 8.35e-44 158
Msa1307450 AT5G24590.2 50.318 157 56 3 4 140 12 166 8.88e-44 158
Msa1307450 AT4G01550.1 41.593 226 99 8 7 216 6 214 1.89e-43 157
Msa1307450 AT5G17260.1 57.600 125 49 3 4 127 5 126 1.43e-40 149
Msa1307450 AT3G03200.1 57.600 125 49 3 4 127 5 126 1.07e-39 147
Msa1307450 AT4G17980.1 47.552 143 71 3 2 141 3 144 1.02e-38 139
Msa1307450 AT4G17980.2 44.805 154 81 3 2 152 3 155 2.28e-38 139
Msa1307450 AT3G17730.1 44.048 168 71 4 4 151 5 169 3.28e-38 138
Msa1307450 AT1G65910.1 56.000 125 51 3 4 127 5 126 1.41e-36 140
Msa1307450 AT5G46590.1 43.114 167 72 4 5 150 6 170 1.51e-35 132
Msa1307450 AT5G46590.2 50.758 132 60 4 5 133 6 135 1.75e-35 131
Msa1307450 AT4G01520.1 37.273 220 106 9 6 197 5 220 6.55e-35 130
Msa1307450 AT3G10480.1 52.000 125 56 3 4 127 26 147 9.81e-35 133
Msa1307450 AT3G10480.2 52.000 125 56 3 4 127 26 147 9.87e-35 133
Msa1307450 AT2G27300.1 38.889 198 100 7 5 186 15 207 9.91e-35 131
Msa1307450 AT3G10490.1 50.000 128 60 3 1 127 23 147 2.63e-34 127
Msa1307450 AT4G01540.4 37.443 219 105 9 7 197 6 220 5.96e-34 130
Msa1307450 AT3G44290.2 47.794 136 65 5 1 135 11 141 7.11e-34 125
Msa1307450 AT5G09330.5 47.020 151 57 4 8 138 9 156 1.31e-33 130
Msa1307450 AT5G09330.2 47.020 151 57 4 8 138 9 156 1.31e-33 130
Msa1307450 AT5G09330.4 47.020 151 57 4 8 138 9 156 1.31e-33 130
Msa1307450 AT5G09330.3 47.020 151 57 4 8 138 9 156 1.31e-33 130
Msa1307450 AT5G09330.1 47.020 151 57 4 8 138 9 156 1.31e-33 130
Msa1307450 AT3G29035.1 42.373 177 90 7 5 178 24 191 1.34e-33 127
Msa1307450 AT3G10490.2 50.000 128 60 3 1 127 23 147 1.37e-33 130
Msa1307450 AT4G01540.2 37.443 219 105 9 7 197 6 220 1.39e-33 129
Msa1307450 AT4G01540.3 37.443 219 105 9 7 197 6 220 2.17e-33 129
Msa1307450 AT3G04070.2 50.781 128 56 4 4 127 9 133 2.45e-33 127
Msa1307450 AT4G01540.1 37.443 219 105 9 7 197 6 220 2.58e-33 130
Msa1307450 AT5G39610.1 53.226 124 52 5 5 127 20 138 3.55e-33 125
Msa1307450 AT3G04070.1 50.781 128 56 4 4 127 9 133 3.59e-33 127
Msa1307450 AT5G64060.1 44.586 157 63 5 2 138 4 156 4.12e-33 127
Msa1307450 AT5G39820.1 51.240 121 55 3 8 127 23 140 7.07e-33 126
Msa1307450 AT3G44290.1 47.794 136 65 5 1 135 11 141 1.62e-32 125
Msa1307450 AT5G61430.1 52.419 124 53 5 5 127 16 134 1.83e-32 125
Msa1307450 AT1G26870.1 49.587 121 57 3 8 127 19 136 3.28e-32 125
Msa1307450 AT5G07680.2 52.419 124 53 5 5 127 3 121 3.50e-32 124
Msa1307450 AT5G07680.1 52.419 124 53 5 5 127 17 135 3.69e-32 124
Msa1307450 AT5G08790.1 50.000 124 55 4 5 127 7 124 6.40e-32 122
Msa1307450 AT1G54330.1 45.395 152 63 4 4 138 5 153 1.12e-31 122
Msa1307450 AT2G17040.1 43.210 162 67 6 8 147 9 167 1.65e-31 120
Msa1307450 AT1G71930.2 42.857 154 81 5 1 152 5 153 1.74e-31 122
Msa1307450 AT1G71930.1 42.857 154 81 5 1 152 5 153 1.74e-31 122
Msa1307450 AT5G53950.1 52.419 124 55 3 5 127 17 137 1.76e-31 123
Msa1307450 AT3G15510.1 51.667 120 54 3 9 127 21 137 2.24e-31 122
Msa1307450 AT3G15500.1 42.945 163 65 6 4 143 13 170 2.49e-31 121
Msa1307450 AT1G02230.1 47.581 124 61 3 6 127 4 125 3.11e-31 122
Msa1307450 AT3G04060.1 50.806 124 56 4 5 127 20 139 3.41e-31 121
Msa1307450 AT1G01720.1 49.194 124 56 4 5 127 7 124 3.48e-31 120
Msa1307450 AT1G32510.1 47.761 134 62 4 1 127 1 133 4.33e-31 120
Msa1307450 AT5G22290.1 48.462 130 61 5 5 133 22 146 4.65e-31 121
Msa1307450 AT4G27410.2 48.800 125 58 4 4 127 13 132 5.11e-31 120
Msa1307450 AT1G52890.1 39.884 173 79 5 4 156 13 180 1.11e-30 119
Msa1307450 AT2G02450.1 41.420 169 87 6 8 168 54 218 1.28e-30 120
Msa1307450 AT2G02450.2 40.936 171 89 6 8 170 54 220 1.55e-30 121
Msa1307450 AT3G15170.1 50.407 123 57 3 6 127 21 140 1.81e-30 119
Msa1307450 AT1G69490.1 47.619 126 60 5 3 127 7 127 2.38e-30 117
Msa1307450 AT3G12910.1 48.780 123 57 4 8 127 24 143 2.52e-30 118
Msa1307450 AT3G18400.1 47.656 128 61 4 1 127 1 123 2.92e-30 118
Msa1307450 AT5G04395.1 40.230 174 75 6 3 163 26 183 5.05e-30 114
Msa1307450 AT3G10500.1 44.304 158 65 5 2 139 6 160 5.26e-30 121
Msa1307450 AT5G04410.1 43.038 158 67 4 2 139 6 160 5.33e-30 121
Msa1307450 AT5G66300.1 48.413 126 60 4 4 127 11 133 6.51e-30 117
Msa1307450 AT1G61110.1 50.000 124 57 4 5 127 16 135 6.66e-30 117
Msa1307450 AT5G18270.2 50.000 124 57 4 5 127 21 140 6.92e-30 118
Msa1307450 AT1G34190.1 51.240 121 55 3 8 127 19 136 7.11e-30 121
Msa1307450 AT2G24430.2 42.949 156 67 5 4 140 15 167 1.05e-29 117
Msa1307450 AT2G24430.1 42.949 156 67 5 4 140 15 167 1.05e-29 117
Msa1307450 AT1G12260.2 46.154 130 62 5 3 127 2 128 1.22e-29 117
Msa1307450 AT1G34180.3 50.413 121 56 3 8 127 19 136 1.40e-29 119
Msa1307450 AT5G18270.1 49.194 124 58 4 5 127 21 140 1.83e-29 117
Msa1307450 AT1G12260.1 46.154 130 62 5 3 127 2 128 1.94e-29 117
Msa1307450 AT1G62700.1 41.935 155 80 6 3 152 2 151 2.01e-29 117
Msa1307450 AT1G62700.2 41.935 155 80 6 3 152 2 151 2.01e-29 117
Msa1307450 AT1G34180.1 50.413 121 56 3 8 127 19 136 3.07e-29 119
Msa1307450 AT1G76420.1 46.032 126 62 4 4 127 21 142 6.11e-29 115
Msa1307450 AT5G63790.2 48.000 125 58 4 4 127 59 177 8.08e-29 114
Msa1307450 AT5G63790.1 48.000 125 58 4 4 127 49 167 8.29e-29 114
Msa1307450 AT1G77450.1 35.526 228 121 10 5 215 10 228 1.18e-28 112
Msa1307450 AT2G33480.2 50.000 124 53 4 5 127 15 130 1.55e-28 112
Msa1307450 AT2G33480.1 50.000 124 53 4 5 127 15 130 1.66e-28 112
Msa1307450 AT3G10480.3 41.250 160 57 5 2 127 24 180 2.43e-28 116
Msa1307450 AT4G27410.3 44.286 140 59 5 4 127 13 149 2.73e-28 113
Msa1307450 AT5G13180.1 45.161 124 61 3 5 127 14 131 3.03e-28 111
Msa1307450 AT5G62380.2 46.400 125 62 4 5 127 7 128 3.18e-28 113
Msa1307450 AT5G62380.1 46.400 125 62 4 5 127 7 128 3.18e-28 113
Msa1307450 AT1G56010.2 45.968 124 62 3 5 127 19 138 3.31e-28 113
Msa1307450 AT1G02250.1 40.260 154 73 4 6 142 4 155 5.10e-28 113
Msa1307450 AT2G18060.3 46.032 126 63 4 4 127 8 130 7.21e-28 113
Msa1307450 AT2G18060.1 46.032 126 63 4 4 127 8 130 7.21e-28 113
Msa1307450 AT4G10350.1 48.387 124 59 4 6 127 10 130 1.21e-27 112
Msa1307450 AT4G36160.1 38.462 169 96 6 4 170 9 171 1.69e-27 112
Msa1307450 AT4G36160.3 38.462 169 96 6 4 170 9 171 1.69e-27 112
Msa1307450 AT4G36160.2 45.238 126 64 4 4 127 13 135 2.12e-27 112
Msa1307450 AT2G43000.1 46.281 121 59 4 8 127 21 136 3.07e-27 109
Msa1307450 AT1G33280.1 48.387 124 59 4 6 127 9 129 3.53e-27 110
Msa1307450 AT1G34180.4 45.865 133 56 4 8 127 19 148 3.01e-26 109
Msa1307450 AT1G34180.2 45.865 133 56 4 8 127 19 148 4.19e-26 110
Msa1307450 AT1G79580.3 46.032 126 64 4 4 127 16 139 1.55e-25 106
Msa1307450 AT1G79580.5 46.032 126 64 4 4 127 16 139 1.55e-25 106
Msa1307450 AT1G79580.4 46.032 126 64 4 4 127 16 139 1.55e-25 106
Msa1307450 AT1G79580.2 46.032 126 64 4 4 127 16 139 1.55e-25 106
Msa1307450 AT1G79580.1 46.032 126 64 4 4 127 16 139 1.55e-25 106
Msa1307450 AT2G46770.1 45.238 126 62 5 5 127 16 137 1.64e-25 106
Msa1307450 AT5G22380.1 41.667 132 72 4 1 128 1 131 4.21e-25 102
Msa1307450 AT3G61910.1 44.000 125 65 4 5 127 11 132 4.79e-25 104
Msa1307450 AT4G28530.1 39.860 143 68 3 1 127 6 146 6.31e-25 104
Msa1307450 AT1G52880.1 44.667 150 68 6 9 155 21 158 8.84e-25 103
Msa1307450 AT3G12977.1 35.135 185 84 6 5 163 18 192 9.86e-25 102
Msa1307450 AT3G44350.1 42.424 132 70 4 1 128 1 130 1.68e-24 99.0
Msa1307450 AT1G32770.1 46.457 127 57 6 6 127 17 137 3.19e-24 102
Msa1307450 AT3G44350.2 42.424 132 70 4 1 128 1 130 6.18e-24 99.8
Msa1307450 AT3G04420.2 34.375 192 102 7 6 175 4 193 1.66e-22 96.7
Msa1307450 AT3G04420.1 34.375 192 102 7 6 175 4 193 2.39e-22 97.1
Msa1307450 AT1G01010.1 39.103 156 71 5 7 140 5 158 3.42e-22 97.8
Msa1307450 AT1G32870.2 47.934 121 57 4 8 127 13 128 1.50e-21 96.7
Msa1307450 AT1G32870.1 47.934 121 57 4 8 127 13 128 1.52e-21 96.7
Msa1307450 AT1G32870.3 47.934 121 57 4 8 127 49 164 1.69e-21 96.7
Msa1307450 AT1G02220.1 37.671 146 72 4 6 136 4 145 4.01e-20 91.7
Msa1307450 AT4G28530.2 40.708 113 50 2 1 98 6 116 2.13e-18 85.5
Msa1307450 AT3G04430.1 44.340 106 54 4 11 115 6 107 1.47e-17 80.9
Msa1307450 AT5G61430.2 52.055 73 32 3 56 127 1 71 9.43e-16 77.0
Msa1307450 AT5G64530.2 36.000 125 62 5 5 127 3 111 1.57e-15 73.9
Msa1307450 AT5G64530.1 35.714 126 63 5 4 127 2 111 3.84e-15 73.6
Msa1307450 AT3G12977.2 34.426 122 57 3 63 163 20 139 7.88e-14 70.9
Msa1307450 AT1G56010.1 50.000 66 30 2 63 127 8 71 2.73e-13 69.7
Msa1307450 AT4G10350.2 45.333 75 38 2 54 127 11 83 1.22e-12 68.2
Msa1307450 AT2G33480.3 50.000 68 31 2 61 127 8 73 3.19e-12 65.9

Find 62 sgRNAs with CRISPR-Local

Find 436 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CATCATTTCGAGATGATTTC+GGG 0.227385 8_4:+3048236 Msa1307450:CDS
ACAAATACGCAAATAGTAAA+AGG 0.269504 8_4:+3042147 Msa1307450:CDS
TAATATGGAACCAATGTTTC+AGG 0.269573 8_4:+3047699 Msa1307450:CDS
GCATCATTTCGAGATGATTT+CGG 0.275502 8_4:+3048235 Msa1307450:CDS
TGGTCTTGACCGTAAGATTA+AGG 0.284539 8_4:+3042208 Msa1307450:CDS
TACTATAATGGTTGTGTTCC+TGG 0.284994 8_4:+3042275 Msa1307450:CDS
TTTACAGTGTGGCAATGTTC+TGG 0.292487 8_4:+3048165 Msa1307450:intron
AGAGGTACAGACAATGTTAT+TGG 0.307609 8_4:+3042233 Msa1307450:CDS
TTCCTCTTCAGCTTTCTTCT+CGG 0.325142 8_4:-3047478 None:intergenic
AAAACACTTGTGTACTATAA+TGG 0.357000 8_4:+3042263 Msa1307450:CDS
GACATGGTGGTGGTTGGTCT+TGG 0.361614 8_4:-3048373 None:intergenic
TACCTTGCCAGAAAATAATA+TGG 0.364967 8_4:+3047684 Msa1307450:CDS
CATATCGATGTGTCCACTTT+CGG 0.387067 8_4:-3047824 None:intergenic
TTCCTGGTGTTAAAAGCAAC+TGG 0.389751 8_4:+3042291 Msa1307450:CDS
TCGTTGAGAATGATTTACTA+TGG 0.400930 8_4:+3047985 Msa1307450:CDS
CTTCTTGAACATCCTAGTTC+AGG 0.401435 8_4:+3048202 Msa1307450:CDS
GAGGTACAGACAATGTTATT+GGG 0.411621 8_4:+3042234 Msa1307450:CDS
GAAGGACACAGTGTGGATAC+TGG 0.428296 8_4:+3042177 Msa1307450:CDS
TGATGAGGTTCCTGAAACAT+TGG 0.441580 8_4:-3047709 None:intergenic
GACCGTAAGATTAAGGTTAG+AGG 0.442904 8_4:+3042215 Msa1307450:CDS
TGGTTGGTCTTGGATGATAC+TGG 0.447272 8_4:-3048363 None:intergenic
CAAGCTCTTCATCTGTTGGT+TGG 0.449162 8_4:-3041888 None:intergenic
TGTTTGCAAGTTCGAACCTT+GGG 0.454947 8_4:+3041981 Msa1307450:CDS
AATGTTTCAGGAACCTCATC+AGG 0.459890 8_4:+3047711 Msa1307450:CDS
CTCGGACTGGACAGGAAAGC+TGG 0.467178 8_4:-3047962 None:intergenic
TCATTCTCAACGACTCGGAC+TGG 0.469733 8_4:-3047975 None:intergenic
TTTACAAGCTCTTCATCTGT+TGG 0.472698 8_4:-3041892 None:intergenic
TACCTCTAACCTTAATCTTA+CGG 0.491526 8_4:-3042217 None:intergenic
GGTTGGAATCTGAATCCAAC+AGG 0.493475 8_4:-3041871 None:intergenic
GATAGAATGGTATGTGATGA+AGG 0.494733 8_4:+3047504 Msa1307450:CDS
CAATTGTTTCAGGTAATAAG+TGG 0.498045 8_4:+3047661 Msa1307450:intron
TCGGAACTCATGTGTCTACT+TGG 0.499283 8_4:-3047531 None:intergenic
TTCAATCTCTGAAAATGAGA+TGG 0.499943 8_4:+3047768 Msa1307450:CDS
ATGACAAACTCATTTCCTGT+TGG 0.502565 8_4:+3041856 Msa1307450:CDS
TGAAGAGGAAACTGATAGAA+TGG 0.513653 8_4:+3047491 Msa1307450:CDS
GAAAATCAAGAAACAGTTGA+AGG 0.516420 8_4:+3047558 Msa1307450:CDS
GAAGACTGGTATGTCGAGAA+AGG 0.517808 8_4:-3047748 None:intergenic
AGCCGAGAAGAAAGCTGAAG+AGG 0.521986 8_4:+3047476 Msa1307450:CDS
TTCGAACCTTGGGACTTACC+AGG 0.522061 8_4:+3041991 Msa1307450:CDS
TTGTTTCTTCGTAGAGTGGA+AGG 0.522631 8_4:-3048337 None:intergenic
GTTATTGTTTCTTCGTAGAG+TGG 0.529521 8_4:-3048341 None:intergenic
ATCAATTCAATGTTAAATGA+CGG 0.532646 8_4:+3047886 Msa1307450:CDS
GAAGTATCTTTATCGAACTC+AGG 0.533769 8_4:+3047790 Msa1307450:CDS
TGCTGAATTAGTCTCTATGC+CGG 0.535468 8_4:+3048023 Msa1307450:CDS
CTCAACGACTCGGACTGGAC+AGG 0.555897 8_4:-3047970 None:intergenic
CAATGTTCTGGATACTTCAA+CGG 0.563840 8_4:+3048177 Msa1307450:CDS
ATGTTTGCAAGTTCGAACCT+TGG 0.568862 8_4:+3041980 Msa1307450:CDS
ATAGTAAAAGGTTTAACAGA+AGG 0.579914 8_4:+3042159 Msa1307450:CDS
ATAGAATGGTATGTGATGAA+GGG 0.580154 8_4:+3047505 Msa1307450:CDS
TAAAATCCGATGATCCAGAA+TGG 0.594696 8_4:+3042102 Msa1307450:CDS
TGTGGATACTGGAAAGCCAC+TGG 0.602459 8_4:+3042188 Msa1307450:CDS
AGCTATAACATTGTTGACAG+TGG 0.605859 8_4:-3041950 None:intergenic
TTGCAATTGATCATCTCTAG+AGG 0.607895 8_4:-3048298 None:intergenic
ATGATTTACTATGGAAGCAG+TGG 0.614801 8_4:+3047994 Msa1307450:CDS
AATCTTACGGTCAAGACCAG+TGG 0.626820 8_4:-3042204 None:intergenic
TAGAATGGTATGTGATGAAG+GGG 0.641183 8_4:+3047506 Msa1307450:CDS
ATCATTTCGAGATGATTTCG+GGG 0.650121 8_4:+3048237 Msa1307450:CDS
TTTGCGTATTTGTAATCGCG+AGG 0.654879 8_4:-3042137 None:intergenic
GTAAATCATTCTCAACGACT+CGG 0.660341 8_4:-3047980 None:intergenic
TCCTGGTGTTAAAAGCAACT+GGG 0.666261 8_4:+3042292 Msa1307450:CDS
TCATTTCGAGATGATTTCGG+GGG 0.671935 8_4:+3048238 Msa1307450:CDS
TTTAACAGAAGGACACAGTG+TGG 0.694289 8_4:+3042170 Msa1307450:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATGAGAAAATAATGAT+GGG - chr8_4:3042034-3042053 None:intergenic 15.0%
!!! TTTTTATGAGAAAATAATGA+TGG - chr8_4:3042035-3042054 None:intergenic 15.0%
!! ATATAATGTGAAATATGATA+AGG + chr8_4:3044126-3044145 Msa1307450:intron 15.0%
!!! ACATTAGAAATTTTAAAATG+TGG + chr8_4:3045581-3045600 Msa1307450:intron 15.0%
!! TTTATGAGAAAATAATGATG+GGG - chr8_4:3042033-3042052 None:intergenic 20.0%
!!! ATCTTCATTTACTATTTTGT+TGG - chr8_4:3043491-3043510 None:intergenic 20.0%
!!! AAATTGAATAAGTCACTTTA+TGG - chr8_4:3043622-3043641 None:intergenic 20.0%
!!! TCTAATCTTTTCAAAGTTTT+TGG - chr8_4:3044624-3044643 None:intergenic 20.0%
!!! ATTGATTCATTGTGATATTT+GGG - chr8_4:3045102-3045121 None:intergenic 20.0%
!!! AATTGATTCATTGTGATATT+TGG - chr8_4:3045103-3045122 None:intergenic 20.0%
!! TTTATGGATATATTACAATG+AGG + chr8_4:3045347-3045366 Msa1307450:intron 20.0%
!!! ATTCAAGCTACTAATAATTT+TGG + chr8_4:3045517-3045536 Msa1307450:intron 20.0%
!! AATTAATAAGGTGTATTCAT+TGG - chr8_4:3046254-3046273 None:intergenic 20.0%
!!! AATAAACTTGTTTTCATCAA+TGG - chr8_4:3046733-3046752 None:intergenic 20.0%
!!! ATGTTTTAACTTTATGAGTA+TGG + chr8_4:3047373-3047392 Msa1307450:intron 20.0%
!! ATCAATTCAATGTTAAATGA+CGG + chr8_4:3047886-3047905 Msa1307450:CDS 20.0%
!! ATACACACTTTAATATCATT+TGG - chr8_4:3048070-3048089 None:intergenic 20.0%
! TATCTCAAAAACAAGTTACT+TGG + chr8_4:3041919-3041938 Msa1307450:CDS 25.0%
! ACAAATACGCAAATAGTAAA+AGG + chr8_4:3042147-3042166 Msa1307450:CDS 25.0%
! ATAGTAAAAGGTTTAACAGA+AGG + chr8_4:3042159-3042178 Msa1307450:CDS 25.0%
! AAAACACTTGTGTACTATAA+TGG + chr8_4:3042263-3042282 Msa1307450:CDS 25.0%
!! TTTTATATCTTAATACCACC+AGG - chr8_4:3043159-3043178 None:intergenic 25.0%
! TTAGATTTACTTGAAGATTC+AGG - chr8_4:3043295-3043314 None:intergenic 25.0%
! ACCTTTCAGATTAAAGATTT+GGG - chr8_4:3043394-3043413 None:intergenic 25.0%
! AATAGTAAATGAAGATGAAG+TGG + chr8_4:3043495-3043514 Msa1307450:intron 25.0%
!!! ATGAAGTGGTTTTAAGAAAA+AGG + chr8_4:3043509-3043528 Msa1307450:intron 25.0%
!!! TGAAGTGGTTTTAAGAAAAA+GGG + chr8_4:3043510-3043529 Msa1307450:intron 25.0%
! ATTCAATTTACACACTTGAT+TGG + chr8_4:3043633-3043652 Msa1307450:intron 25.0%
! TTCAATTTACACACTTGATT+GGG + chr8_4:3043634-3043653 Msa1307450:intron 25.0%
! AATAATCTAAGCCTTCAATT+TGG + chr8_4:3043827-3043846 Msa1307450:intron 25.0%
! ATGTAATCTTGTAAATAAGC+AGG + chr8_4:3044186-3044205 Msa1307450:intron 25.0%
! TGTAATCTTGTAAATAAGCA+GGG + chr8_4:3044187-3044206 Msa1307450:intron 25.0%
! TTCATGAAAAGTAACATTTC+TGG + chr8_4:3044458-3044477 Msa1307450:intron 25.0%
! TTACAAAGGTTATGTTCTTA+TGG - chr8_4:3044511-3044530 None:intergenic 25.0%
!!! ATATTTTTAGGCTATAAACC+TGG - chr8_4:3044534-3044553 None:intergenic 25.0%
!! ACTTTGAAAAGATTAGAATC+AGG + chr8_4:3044627-3044646 Msa1307450:intron 25.0%
! AGAATCATGTAAAACATGAT+AGG + chr8_4:3044653-3044672 Msa1307450:intron 25.0%
! GAATCATGTAAAACATGATA+GGG + chr8_4:3044654-3044673 Msa1307450:intron 25.0%
! CCAAATTACCAAATTGTTAT+TGG - chr8_4:3044749-3044768 None:intergenic 25.0%
!! CCAATAACAATTTGGTAATT+TGG + chr8_4:3044746-3044765 Msa1307450:intron 25.0%
!! CCTTCATTTTATAACTCTAA+AGG - chr8_4:3044876-3044895 None:intergenic 25.0%
!!! CCTTTAGAGTTATAAAATGA+AGG + chr8_4:3044873-3044892 Msa1307450:intron 25.0%
! AATGAAGGTAAATCAAATTC+AGG + chr8_4:3044888-3044907 Msa1307450:intron 25.0%
! ATGAAGGTAAATCAAATTCA+GGG + chr8_4:3044889-3044908 Msa1307450:intron 25.0%
! AAAATCCTTAGAAGTGATAA+TGG - chr8_4:3044915-3044934 None:intergenic 25.0%
!!! TTATCACTTCTAAGGATTTT+AGG + chr8_4:3044915-3044934 Msa1307450:intron 25.0%
! TTGATTCATTGTGATATTTG+GGG - chr8_4:3045101-3045120 None:intergenic 25.0%
! AAATTGACAAACATCACAAA+TGG + chr8_4:3045181-3045200 Msa1307450:intron 25.0%
! TTATTATCAACACAGATAGA+AGG + chr8_4:3045206-3045225 Msa1307450:intron 25.0%
! TATTATCAACACAGATAGAA+GGG + chr8_4:3045207-3045226 Msa1307450:intron 25.0%
! CATATTTGACAATCTTTGAT+TGG + chr8_4:3045241-3045260 Msa1307450:intron 25.0%
!! AGGTTGAACATCTTTATTTA+TGG + chr8_4:3045331-3045350 Msa1307450:intron 25.0%
! TCATGTATAATGCATTTATC+AGG + chr8_4:3045476-3045495 Msa1307450:intron 25.0%
! TGCATTTATCAGGTAAAAAT+TGG + chr8_4:3045486-3045505 Msa1307450:intron 25.0%
!!! ATGGTAACAATGGTTTTATT+TGG + chr8_4:3045632-3045651 Msa1307450:intron 25.0%
! GAATACACCTTATTAATTGA+AGG + chr8_4:3046256-3046275 Msa1307450:intron 25.0%
! ACCTTATTAATTGAAGGTAA+TGG + chr8_4:3046262-3046281 Msa1307450:intron 25.0%
! TCCATTACCTTCAATTAATA+AGG - chr8_4:3046266-3046285 None:intergenic 25.0%
! GATACCATATTATGAAACAA+TGG + chr8_4:3047106-3047125 Msa1307450:intron 25.0%
! TCTTCCATTGTTTCATAATA+TGG - chr8_4:3042319-3042338 None:intergenic 25.0%
!!! ATTGGTTCCATATTATTTTC+TGG - chr8_4:3047694-3047713 None:intergenic 25.0%
!!! TTTTTTTGAAACTATGGAAG+AGG + chr8_4:3047852-3047871 Msa1307450:CDS 25.0%
!!! AAATGACGGATATTTTGTTA+AGG + chr8_4:3047900-3047919 Msa1307450:intron 25.0%
!! TTTTGAGCAGAAATATTTAC+CGG - chr8_4:3048045-3048064 None:intergenic 25.0%
!!! CTTATTTTTGAACAAGTACT+TGG + chr8_4:3048092-3048111 Msa1307450:intron 25.0%
!! TTCTTCTAAATTTTACAGTG+TGG + chr8_4:3048154-3048173 Msa1307450:intron 25.0%
!!! GTAACTTGTTTTTGAGATAG+TGG - chr8_4:3041918-3041937 None:intergenic 30.0%
TACCTCTAACCTTAATCTTA+CGG - chr8_4:3042220-3042239 None:intergenic 30.0%
GGGTGATTATTATGAAACAA+TGG + chr8_4:3042312-3042331 Msa1307450:intron 30.0%
!! TTGGACAACAAAGTATTGAA+TGG + chr8_4:3042563-3042582 Msa1307450:intron 30.0%
!! AACAAAGTATTGAATGGTTG+AGG + chr8_4:3042569-3042588 Msa1307450:intron 30.0%
!! ACAAAGTATTGAATGGTTGA+GGG + chr8_4:3042570-3042589 Msa1307450:intron 30.0%
TAGTAAAAAAATCAGCAAGC+TGG + chr8_4:3042603-3042622 Msa1307450:intron 30.0%
! AGAGTGTTAAGATACTTGAA+AGG - chr8_4:3043058-3043077 None:intergenic 30.0%
AGCATTAAAATGAGTTTGAG+TGG + chr8_4:3043084-3043103 Msa1307450:intron 30.0%
GCATTAAAATGAGTTTGAGT+GGG + chr8_4:3043085-3043104 Msa1307450:intron 30.0%
AATCTAAACAGTACTTTCTC+TGG + chr8_4:3043308-3043327 Msa1307450:intron 30.0%
CACCTTTCAGATTAAAGATT+TGG - chr8_4:3043395-3043414 None:intergenic 30.0%
!!! TGGTTTTAAGAAAAAGGGAA+TGG + chr8_4:3043515-3043534 Msa1307450:intron 30.0%
AATCATCAATGGTTACAAAC+AGG - chr8_4:3043551-3043570 None:intergenic 30.0%
ACTTCAGTCTTAATCATCAA+TGG - chr8_4:3043562-3043581 None:intergenic 30.0%
GTTTATATGATTATACCTCC+TGG - chr8_4:3043676-3043695 None:intergenic 30.0%
AAGGGATATAACCAAATTGA+AGG - chr8_4:3043841-3043860 None:intergenic 30.0%
TTCAATTTGGTTATATCCCT+TGG + chr8_4:3043840-3043859 Msa1307450:intron 30.0%
AAAGCAAAACAAGAATGAGA+AGG + chr8_4:3044084-3044103 Msa1307450:intron 30.0%
GCATATATGGAATTGACAAT+AGG + chr8_4:3044159-3044178 Msa1307450:intron 30.0%
GTAATCTTGTAAATAAGCAG+GGG + chr8_4:3044188-3044207 Msa1307450:intron 30.0%
! GCAAGGAAGTCTATATTTTT+AGG - chr8_4:3044546-3044565 None:intergenic 30.0%
GCATATGACCAATAACAATT+TGG + chr8_4:3044738-3044757 Msa1307450:intron 30.0%
TTCCTACATTGAGTATATGT+TGG + chr8_4:3044787-3044806 Msa1307450:intron 30.0%
! ATGACTTTAGTAGGTTTGTT+TGG - chr8_4:3045025-3045044 None:intergenic 30.0%
!! CTATTGTTGATGACTTTAGT+AGG - chr8_4:3045034-3045053 None:intergenic 30.0%
TACTTATGACCATGAATAGA+AGG + chr8_4:3045062-3045081 Msa1307450:intron 30.0%
TGAGATAAACTATGAGGAAA+AGG + chr8_4:3045140-3045159 Msa1307450:intron 30.0%
ATATTCCTAAAACTGCACTT+TGG - chr8_4:3045289-3045308 None:intergenic 30.0%
! AGGAATATGAGTAAAAGTAC+TGG + chr8_4:3045301-3045320 Msa1307450:intron 30.0%
!! GTAAAAGTACTGGAAACAAT+AGG + chr8_4:3045311-3045330 Msa1307450:intron 30.0%
TTAGAAACAGAAGACTGAAA+AGG + chr8_4:3045374-3045393 Msa1307450:intron 30.0%
ATGGTGGTTTATACAAATTG+AGG - chr8_4:3045418-3045437 None:intergenic 30.0%
AATTTGTATAAACCACCATG+AGG + chr8_4:3045419-3045438 Msa1307450:intron 30.0%
ATCAGATTAACCTTGAAATG+TGG + chr8_4:3045548-3045567 Msa1307450:intron 30.0%
TCTATATTCACCACATTTCA+AGG - chr8_4:3045561-3045580 None:intergenic 30.0%
TTTGGTAAATGAACATGAAC+AGG + chr8_4:3045650-3045669 Msa1307450:intron 30.0%
TATCTGATTCATCTCATGAT+TGG - chr8_4:3045748-3045767 None:intergenic 30.0%
! AAAACAGTTGATATACCTGA+AGG + chr8_4:3045779-3045798 Msa1307450:intron 30.0%
AGGATTGGACTTATATGAAT+TGG + chr8_4:3046024-3046043 Msa1307450:intron 30.0%
GGATTGGACTTATATGAATT+GGG + chr8_4:3046025-3046044 Msa1307450:intron 30.0%
GATTGGACTTATATGAATTG+GGG + chr8_4:3046026-3046045 Msa1307450:intron 30.0%
ACAAAACCTAGAGTTATTCT+TGG + chr8_4:3046105-3046124 Msa1307450:intron 30.0%
TCTAAGAAGCAATATGGAAA+TGG - chr8_4:3046148-3046167 None:intergenic 30.0%
! TCTGATTCTAAGAAGCAATA+TGG - chr8_4:3046154-3046173 None:intergenic 30.0%
! CAAGTGATTCAATTTTTGAC+TGG - chr8_4:3046337-3046356 None:intergenic 30.0%
CACTGAAATGAAAACTCTAT+GGG - chr8_4:3046458-3046477 None:intergenic 30.0%
TCACTGAAATGAAAACTCTA+TGG - chr8_4:3046459-3046478 None:intergenic 30.0%
! TCTATCAACAATTTGAAGCA+AGG - chr8_4:3046505-3046524 None:intergenic 30.0%
ACTAAAGTTTGAGCAATTTG+TGG + chr8_4:3046613-3046632 Msa1307450:intron 30.0%
AAATCATCAAGATCAGGAAT+AGG + chr8_4:3046700-3046719 Msa1307450:intron 30.0%
TAATTTGAACCAGTAAGAAG+TGG + chr8_4:3046796-3046815 Msa1307450:intron 30.0%
! AAGCTTTTCATCTTCAACAA+TGG - chr8_4:3046905-3046924 None:intergenic 30.0%
TCAAATATGCAGAAAAACAG+AGG + chr8_4:3046924-3046943 Msa1307450:intron 30.0%
GGAAGAAACAAGAAGAAAAA+CGG + chr8_4:3047026-3047045 Msa1307450:intron 30.0%
AAACAAGAAGAAAAACGGTT+AGG + chr8_4:3047031-3047050 Msa1307450:intron 30.0%
TTAGGATCGCAAGAAAAAAA+CGG + chr8_4:3047049-3047068 Msa1307450:intron 30.0%
TTGTTGTAACAAAACAAACC+TGG - chr8_4:3047354-3047373 None:intergenic 30.0%
!!! GAGTATGGTATGAGTTTTTT+CGG + chr8_4:3047388-3047407 Msa1307450:intron 30.0%
! AAAAGTCCTCTACGAAATTT+TGG - chr8_4:3047433-3047452 None:intergenic 30.0%
ATAGAATGGTATGTGATGAA+GGG + chr8_4:3047505-3047524 Msa1307450:CDS 30.0%
! TGTTTCTTGATTTTCGTGAT+CGG - chr8_4:3047553-3047572 None:intergenic 30.0%
GAAAATCAAGAAACAGTTGA+AGG + chr8_4:3047558-3047577 Msa1307450:CDS 30.0%
AAGAATGAAATCCTTACATC+AGG - chr8_4:3047588-3047607 None:intergenic 30.0%
ACTTGTTTGTCAATTGTTTC+AGG + chr8_4:3047651-3047670 Msa1307450:intron 30.0%
! CAATTGTTTCAGGTAATAAG+TGG + chr8_4:3047661-3047680 Msa1307450:intron 30.0%
TACCTTGCCAGAAAATAATA+TGG + chr8_4:3047684-3047703 Msa1307450:CDS 30.0%
!! TTCCATATTATTTTCTGGCA+AGG - chr8_4:3047689-3047708 None:intergenic 30.0%
TAATATGGAACCAATGTTTC+AGG + chr8_4:3047699-3047718 Msa1307450:CDS 30.0%
! TTCAATCTCTGAAAATGAGA+TGG + chr8_4:3047768-3047787 Msa1307450:CDS 30.0%
!!! GCAGAGTTTTTTTGAAACTA+TGG + chr8_4:3047846-3047865 Msa1307450:CDS 30.0%
TCGTTGAGAATGATTTACTA+TGG + chr8_4:3047985-3048004 Msa1307450:CDS 30.0%
! ATGAAATCTCTAAGTTGAGT+TGG + chr8_4:3048120-3048139 Msa1307450:intron 30.0%
ATGACAAACTCATTTCCTGT+TGG + chr8_4:3041856-3041875 Msa1307450:CDS 35.0%
TTTACAAGCTCTTCATCTGT+TGG - chr8_4:3041895-3041914 None:intergenic 35.0%
AGCTATAACATTGTTGACAG+TGG - chr8_4:3041953-3041972 None:intergenic 35.0%
!! GGTTTGTTTGTGATTTTACC+TGG - chr8_4:3042012-3042031 None:intergenic 35.0%
TAAAATCCGATGATCCAGAA+TGG + chr8_4:3042102-3042121 Msa1307450:CDS 35.0%
GAAAAACCATTCTGGATCAT+CGG - chr8_4:3042111-3042130 None:intergenic 35.0%
GGACAAAAGAAAAACCATTC+TGG - chr8_4:3042119-3042138 None:intergenic 35.0%
! AGAGGTACAGACAATGTTAT+TGG + chr8_4:3042233-3042252 Msa1307450:CDS 35.0%
GAGGTACAGACAATGTTATT+GGG + chr8_4:3042234-3042253 Msa1307450:CDS 35.0%
TACTATAATGGTTGTGTTCC+TGG + chr8_4:3042275-3042294 Msa1307450:CDS 35.0%
GTTTGTGTAGTACAACTCTT+AGG - chr8_4:3042396-3042415 None:intergenic 35.0%
CAATAGTGAAGTTACTTGCA+TGG + chr8_4:3042446-3042465 Msa1307450:intron 35.0%
AATGTCTATCATCTCCAACT+TGG + chr8_4:3042544-3042563 Msa1307450:intron 35.0%
! CAATACTTTGTTGTCCAAGT+TGG - chr8_4:3042561-3042580 None:intergenic 35.0%
TGATTGTCACAGTAGATAAC+AGG + chr8_4:3042755-3042774 Msa1307450:intron 35.0%
GAAGCTTCTCTTCAATTACA+AGG - chr8_4:3043004-3043023 None:intergenic 35.0%
AATTGAAGAGAAGCTTCTCT+AGG + chr8_4:3043007-3043026 Msa1307450:intron 35.0%
ATTGAAGAGAAGCTTCTCTA+GGG + chr8_4:3043008-3043027 Msa1307450:intron 35.0%
TGAGTGATGAATGTGATATC+TGG + chr8_4:3043133-3043152 Msa1307450:intron 35.0%
TAAGCAGGAACATCAGAATA+AGG + chr8_4:3043199-3043218 Msa1307450:intron 35.0%
AAGGTTGTGAATCATCATTG+TGG + chr8_4:3043218-3043237 Msa1307450:intron 35.0%
TCATTGTGGAGCTTAACATT+TGG + chr8_4:3043232-3043251 Msa1307450:intron 35.0%
AGCTTAACATTTGGATCAGA+AGG + chr8_4:3043241-3043260 Msa1307450:intron 35.0%
!! GTGTACTAATAGGCTTTGAA+TGG + chr8_4:3043263-3043282 Msa1307450:intron 35.0%
!! TACTAATAGGCTTTGAATGG+AGG + chr8_4:3043266-3043285 Msa1307450:intron 35.0%
AATGAGCAACTTCAATACCA+AGG + chr8_4:3043353-3043372 Msa1307450:intron 35.0%
GGCATTCTTAAATACTTCCT+TGG - chr8_4:3043373-3043392 None:intergenic 35.0%
GCCCAAATCTTTAATCTGAA+AGG + chr8_4:3043390-3043409 Msa1307450:intron 35.0%
!! TTGATGATGTGATCTTAGCT+GGG - chr8_4:3043462-3043481 None:intergenic 35.0%
TTTACACACTTGATTGGGAT+TGG + chr8_4:3043639-3043658 Msa1307450:intron 35.0%
!!! GTGAACAATGCTTTTTTGCA+TGG - chr8_4:3043715-3043734 None:intergenic 35.0%
!! CATTGTTCACATCAAGTTGA+TGG + chr8_4:3043725-3043744 Msa1307450:intron 35.0%
!!! TTTTGAAACATACTCTCCAG+TGG - chr8_4:3043809-3043828 None:intergenic 35.0%
AAAGTGAAACATCATGCTGA+TGG - chr8_4:3043898-3043917 None:intergenic 35.0%
AAGCAAACAAGCATGATTGT+TGG - chr8_4:3044026-3044045 None:intergenic 35.0%
TTTGCTTCAGTGAAGGATTT+AGG + chr8_4:3044039-3044058 Msa1307450:intron 35.0%
AGGAGAAGAAGATGCATATA+TGG + chr8_4:3044146-3044165 Msa1307450:intron 35.0%
AGCAATAATAGGAGAATCAG+AGG + chr8_4:3044248-3044267 Msa1307450:intron 35.0%
GCAATAATAGGAGAATCAGA+GGG + chr8_4:3044249-3044268 Msa1307450:intron 35.0%
GAATCTTCTGGTGTAGAAAT+AGG + chr8_4:3044318-3044337 Msa1307450:intron 35.0%
ATCAACAAAAGGTTGAGATG+AGG + chr8_4:3044371-3044390 Msa1307450:intron 35.0%
TCAACAAAAGGTTGAGATGA+GGG + chr8_4:3044372-3044391 Msa1307450:intron 35.0%
AGAACATAACCTTTGTAACC+AGG + chr8_4:3044513-3044532 Msa1307450:intron 35.0%
AATATAGACTTCCTTGCTCT+AGG + chr8_4:3044549-3044568 Msa1307450:intron 35.0%
CATGATAGGGAGATTTATGA+TGG + chr8_4:3044667-3044686 Msa1307450:intron 35.0%
CACCAACATATACTCAATGT+AGG - chr8_4:3044792-3044811 None:intergenic 35.0%
!! CTAAAGGCATTCTTCATCAT+AGG - chr8_4:3044860-3044879 None:intergenic 35.0%
TTTGATCAAATCCAAAGCTG+AGG - chr8_4:3044997-3045016 None:intergenic 35.0%
TTGAGTGTTCCTTCTATTCA+TGG - chr8_4:3045074-3045093 None:intergenic 35.0%
TGAATAGAAGGAACACTCAA+AGG + chr8_4:3045074-3045093 Msa1307450:intron 35.0%
GTAGCATGAGATAAACTATG+AGG + chr8_4:3045134-3045153 Msa1307450:intron 35.0%
GACTGAAAAGGAAAAACTGA+AGG + chr8_4:3045386-3045405 Msa1307450:intron 35.0%
ATTGTTACCATACATCATGC+TGG - chr8_4:3045623-3045642 None:intergenic 35.0%
AGCATGATGTATGGTAACAA+TGG + chr8_4:3045622-3045641 Msa1307450:intron 35.0%
! CATGATTGGTTACTTGATTC+TGG - chr8_4:3045734-3045753 None:intergenic 35.0%
AATTGGGAGTAGAAGCAATA+TGG + chr8_4:3045825-3045844 Msa1307450:intron 35.0%
CAATCACATTTGTTTGCTTC+AGG - chr8_4:3045878-3045897 None:intergenic 35.0%
!!! GAGTTTTGTTATCAGAAGCA+TGG - chr8_4:3046055-3046074 None:intergenic 35.0%
GATAACAAAACTCCACAGTA+TGG + chr8_4:3046062-3046081 Msa1307450:intron 35.0%
GGAAATGGAAAATCATTTGC+TGG - chr8_4:3046133-3046152 None:intergenic 35.0%
TACCATTATTACTCTCCTCT+TGG + chr8_4:3046224-3046243 Msa1307450:intron 35.0%
ATCCAAGAGGAGAGTAATAA+TGG - chr8_4:3046229-3046248 None:intergenic 35.0%
! GTATTCATTGGTTATCCAAG+AGG - chr8_4:3046242-3046261 None:intergenic 35.0%
!! AAGGTAATGGATCCAAAAGA+AGG + chr8_4:3046275-3046294 Msa1307450:intron 35.0%
TTCTATGTTCATCCTAGTGA+AGG - chr8_4:3046844-3046863 None:intergenic 35.0%
ATCGCAAGAAAAAAACGGTT+AGG + chr8_4:3047054-3047073 Msa1307450:intron 35.0%
GTTTGTGTAGTACAACTCTT+AGG - chr8_4:3042396-3042415 None:intergenic 35.0%
CAATAGTGAAGTTACTTGCA+TGG + chr8_4:3042446-3042465 Msa1307450:intron 35.0%
! TATCACCTTTGATGATAACC+AGG + chr8_4:3047333-3047352 Msa1307450:intron 35.0%
ACAAACCTGGTTATCATCAA+AGG - chr8_4:3047341-3047360 None:intergenic 35.0%
TATCCTCCAAAATTTCGTAG+AGG + chr8_4:3047424-3047443 Msa1307450:intron 35.0%
TGAAGAGGAAACTGATAGAA+TGG + chr8_4:3047491-3047510 Msa1307450:CDS 35.0%
GATAGAATGGTATGTGATGA+AGG + chr8_4:3047504-3047523 Msa1307450:CDS 35.0%
TAGAATGGTATGTGATGAAG+GGG + chr8_4:3047506-3047525 Msa1307450:CDS 35.0%
TTGAAGGAATTCCTGATGTA+AGG + chr8_4:3047574-3047593 Msa1307450:intron 35.0%
! CATTTTCAGAGATTGAAGAC+TGG - chr8_4:3047765-3047784 None:intergenic 35.0%
! GAAGTATCTTTATCGAACTC+AGG + chr8_4:3047790-3047809 Msa1307450:CDS 35.0%
! GGATTTTATGATTCCGAAAG+TGG + chr8_4:3047811-3047830 Msa1307450:CDS 35.0%
GTAAATCATTCTCAACGACT+CGG - chr8_4:3047983-3048002 None:intergenic 35.0%
ATGATTTACTATGGAAGCAG+TGG + chr8_4:3047994-3048013 Msa1307450:CDS 35.0%
!!! TCTCTAAGTTGAGTTGGTTT+TGG + chr8_4:3048126-3048145 Msa1307450:intron 35.0%
! CAATGTTCTGGATACTTCAA+CGG + chr8_4:3048177-3048196 Msa1307450:CDS 35.0%
GCATCATTTCGAGATGATTT+CGG + chr8_4:3048235-3048254 Msa1307450:CDS 35.0%
CATCATTTCGAGATGATTTC+GGG + chr8_4:3048236-3048255 Msa1307450:CDS 35.0%
ATCATTTCGAGATGATTTCG+GGG + chr8_4:3048237-3048256 Msa1307450:CDS 35.0%
TTGCAATTGATCATCTCTAG+AGG - chr8_4:3048301-3048320 None:intergenic 35.0%
! GTTATTGTTTCTTCGTAGAG+TGG - chr8_4:3048344-3048363 None:intergenic 35.0%
! TGAAGCAGATCTTTTTGACA+TGG - chr8_4:3048392-3048411 None:intergenic 35.0%
ATGTTTGCAAGTTCGAACCT+TGG + chr8_4:3041980-3041999 Msa1307450:CDS 40.0%
TGTTTGCAAGTTCGAACCTT+GGG + chr8_4:3041981-3042000 Msa1307450:CDS 40.0%
! ATTTTACCTGGTAAGTCCCA+AGG - chr8_4:3042000-3042019 None:intergenic 40.0%
TTTGCGTATTTGTAATCGCG+AGG - chr8_4:3042140-3042159 None:intergenic 40.0%
TTTAACAGAAGGACACAGTG+TGG + chr8_4:3042170-3042189 Msa1307450:CDS 40.0%
! TGGTCTTGACCGTAAGATTA+AGG + chr8_4:3042208-3042227 Msa1307450:CDS 40.0%
GACCGTAAGATTAAGGTTAG+AGG + chr8_4:3042215-3042234 Msa1307450:CDS 40.0%
! TTCCTGGTGTTAAAAGCAAC+TGG + chr8_4:3042291-3042310 Msa1307450:CDS 40.0%
! TCCTGGTGTTAAAAGCAACT+GGG + chr8_4:3042292-3042311 Msa1307450:CDS 40.0%
TTTATCACCCTCCAACTTGT+GGG - chr8_4:3042526-3042545 None:intergenic 40.0%
ATTTATCACCCTCCAACTTG+TGG - chr8_4:3042527-3042546 None:intergenic 40.0%
!! AAAATCAGCAAGCTGGTCTT+TGG + chr8_4:3042610-3042629 Msa1307450:intron 40.0%
AGGTAGCAGTTTGAGAATGT+TGG + chr8_4:3042640-3042659 Msa1307450:intron 40.0%
TATTGTACGAGAGAAACTGC+AGG - chr8_4:3042666-3042685 None:intergenic 40.0%
GCAGTTTCTCTCGTACAATA+TGG + chr8_4:3042666-3042685 Msa1307450:intron 40.0%
ACAGTAGATAACAGGAGTCT+TGG + chr8_4:3042763-3042782 Msa1307450:intron 40.0%
CAGCATCATGTGAATTGCAA+TGG - chr8_4:3042826-3042845 None:intergenic 40.0%
! TCTGGTCAGTGCTTCTTTTT+GGG - chr8_4:3042932-3042951 None:intergenic 40.0%
GATACCAGAAGATCTATCTC+TGG - chr8_4:3042950-3042969 None:intergenic 40.0%
! AGGCTTTTCAGATACAGACT+GGG - chr8_4:3042984-3043003 None:intergenic 40.0%
! AAGGCTTTTCAGATACAGAC+TGG - chr8_4:3042985-3043004 None:intergenic 40.0%
AGATACTTGAAAGGATCTCC+AGG - chr8_4:3043049-3043068 None:intergenic 40.0%
ATTCTGATGTTCCTGCTTAC+AGG - chr8_4:3043198-3043217 None:intergenic 40.0%
! GGATCAGAAGGTGTACTAAT+AGG + chr8_4:3043253-3043272 Msa1307450:intron 40.0%
GAAGTTGCTCATTCTTCATC+TGG - chr8_4:3043346-3043365 None:intergenic 40.0%
!! GTTGATGATGTGATCTTAGC+TGG - chr8_4:3043463-3043482 None:intergenic 40.0%
CAAGCAGGAAATGGTATGAA+AGG - chr8_4:3043588-3043607 None:intergenic 40.0%
ACTTGATTGGGATTGGAATG+TGG + chr8_4:3043646-3043665 Msa1307450:intron 40.0%
GAGATGCCAATTATGCATAG+AGG + chr8_4:3043747-3043766 Msa1307450:intron 40.0%
CTTTGGCCTCTATGCATAAT+TGG - chr8_4:3043756-3043775 None:intergenic 40.0%
AGTCAGGATTGTTCTTGCTT+TGG - chr8_4:3043773-3043792 None:intergenic 40.0%
! AGAGAGGTATAAAGCCAGAT+TGG - chr8_4:3043869-3043888 None:intergenic 40.0%
!! TCTGGCTTTATACCTCTCTA+TGG + chr8_4:3043870-3043889 Msa1307450:intron 40.0%
CTTGAGTAAGACTGGTACTT+GGG - chr8_4:3043974-3043993 None:intergenic 40.0%
CTTAATGCCTTGAGTAAGAC+TGG - chr8_4:3043982-3044001 None:intergenic 40.0%
ATGCTTGTTTGCTTCAGTGA+AGG + chr8_4:3044032-3044051 Msa1307450:intron 40.0%
ATTTAGGCTCAGATTGAGTG+TGG + chr8_4:3044055-3044074 Msa1307450:intron 40.0%
ATCTTGTAAATAAGCAGGGG+TGG + chr8_4:3044191-3044210 Msa1307450:intron 40.0%
! AGCAGAAGATTCAGAAGTGT+TGG + chr8_4:3044272-3044291 Msa1307450:intron 40.0%
!! GCAGAAGATTCAGAAGTGTT+GGG + chr8_4:3044273-3044292 Msa1307450:intron 40.0%
TGGTGTAGAAATAGGAGAAG+TGG + chr8_4:3044326-3044345 Msa1307450:intron 40.0%
GGTGTAGAAATAGGAGAAGT+GGG + chr8_4:3044327-3044346 Msa1307450:intron 40.0%
GGGTCAAGATCATCAACAAA+AGG + chr8_4:3044360-3044379 Msa1307450:intron 40.0%
GATATAGTGCCAGGTATCAA+TGG + chr8_4:3044398-3044417 Msa1307450:intron 40.0%
GGCTATAAACCTGGTTACAA+AGG - chr8_4:3044525-3044544 None:intergenic 40.0%
CATCTACTATCCAATCTCAC+AGG - chr8_4:3044587-3044606 None:intergenic 40.0%
! GGAGATTTATGATGGAGAAG+TGG + chr8_4:3044675-3044694 Msa1307450:intron 40.0%
! TTTATGATGGAGAAGTGGAG+TGG + chr8_4:3044680-3044699 Msa1307450:intron 40.0%
! TCTACTCTAGCATTTTGCTG+AGG + chr8_4:3044819-3044838 Msa1307450:intron 40.0%
ATGAATAGACACCTCAGCTT+TGG + chr8_4:3044983-3045002 Msa1307450:intron 40.0%
CACTTTGGCACTTTAGATTG+GGG - chr8_4:3045274-3045293 None:intergenic 40.0%
GCACTTTGGCACTTTAGATT+GGG - chr8_4:3045275-3045294 None:intergenic 40.0%
TGCACTTTGGCACTTTAGAT+TGG - chr8_4:3045276-3045295 None:intergenic 40.0%
! AAGTGCCAAAGTGCAGTTTT+AGG + chr8_4:3045281-3045300 Msa1307450:intron 40.0%
TACATGATCTGATTACCCAC+AGG - chr8_4:3045463-3045482 None:intergenic 40.0%
AACAGTACCAGCATGATGTA+TGG + chr8_4:3045613-3045632 Msa1307450:intron 40.0%
! ACAGTTGATATACCTGAAGG+AGG + chr8_4:3045782-3045801 Msa1307450:intron 40.0%
TTGTCAACTGCAGAATTCAC+AGG + chr8_4:3045956-3045975 Msa1307450:intron 40.0%
!! GCATTAGTAGCATTTGCTGT+AGG + chr8_4:3046004-3046023 Msa1307450:intron 40.0%
!! AGTAGCATTTGCTGTAGGAT+TGG + chr8_4:3046009-3046028 Msa1307450:intron 40.0%
CAAACGTACAAACCATACTG+TGG - chr8_4:3046077-3046096 None:intergenic 40.0%
CTGGTTCCAAGAATAACTCT+AGG - chr8_4:3046114-3046133 None:intergenic 40.0%
!! CTTGAGTCTTCTGAAACAGA+GGG + chr8_4:3046190-3046209 Msa1307450:intron 40.0%
! CAAGTCTCAAGTCCTTCTTT+TGG - chr8_4:3046290-3046309 None:intergenic 40.0%
GGAAAAGGACAAGTGCAATT+AGG + chr8_4:3046406-3046425 Msa1307450:intron 40.0%
! GCAATCATCTGGTTTATTCG+TGG - chr8_4:3046657-3046676 None:intergenic 40.0%
CGGTTCAAATCATCAAGATC+AGG + chr8_4:3046694-3046713 Msa1307450:intron 40.0%
GTAGTTACTCCACTTCTTAC+TGG - chr8_4:3046808-3046827 None:intergenic 40.0%
! AGTCCTCTACGAAATTTTGG+AGG - chr8_4:3047430-3047449 None:intergenic 40.0%
TTCCTCTTCAGCTTTCTTCT+CGG - chr8_4:3047481-3047500 None:intergenic 40.0%
TGATGAGGTTCCTGAAACAT+TGG - chr8_4:3047712-3047731 None:intergenic 40.0%
AATGTTTCAGGAACCTCATC+AGG + chr8_4:3047711-3047730 Msa1307450:CDS 40.0%
! AAGTACTTTTCAGCCTGATG+AGG - chr8_4:3047727-3047746 None:intergenic 40.0%
CATATCGATGTGTCCACTTT+CGG - chr8_4:3047827-3047846 None:intergenic 40.0%
! TGCTGAATTAGTCTCTATGC+CGG + chr8_4:3048023-3048042 Msa1307450:CDS 40.0%
TTTACAGTGTGGCAATGTTC+TGG + chr8_4:3048165-3048184 Msa1307450:intron 40.0%
CTTCTTGAACATCCTAGTTC+AGG + chr8_4:3048202-3048221 Msa1307450:CDS 40.0%
TCATTTCGAGATGATTTCGG+GGG + chr8_4:3048238-3048257 Msa1307450:CDS 40.0%
! TTGTTTCTTCGTAGAGTGGA+AGG - chr8_4:3048340-3048359 None:intergenic 40.0%
! AGATCTTTTTGACATGGTGG+TGG - chr8_4:3048386-3048405 None:intergenic 40.0%
! AGCAGATCTTTTTGACATGG+TGG - chr8_4:3048389-3048408 None:intergenic 40.0%
GGTTGGAATCTGAATCCAAC+AGG - chr8_4:3041874-3041893 None:intergenic 45.0%
CAAGCTCTTCATCTGTTGGT+TGG - chr8_4:3041891-3041910 None:intergenic 45.0%
AATCTTACGGTCAAGACCAG+TGG - chr8_4:3042207-3042226 None:intergenic 45.0%
!!! ACCCAGTTGCTTTTAACACC+AGG - chr8_4:3042296-3042315 None:intergenic 45.0%
TTATCACCCTCCAACTTGTG+GGG - chr8_4:3042525-3042544 None:intergenic 45.0%
!! AGCTGGTCTTTGGAAGAGAT+AGG + chr8_4:3042620-3042639 Msa1307450:intron 45.0%
TTAGTGCGCTCATGAAACAC+AGG + chr8_4:3042707-3042726 Msa1307450:intron 45.0%
TGAGGCTGAGTATAGAGCTT+TGG - chr8_4:3042852-3042871 None:intergenic 45.0%
TCTATACTCAGCCTCAGAAG+AGG + chr8_4:3042856-3042875 Msa1307450:intron 45.0%
TGTCAGCAAATCCTCTTCTG+AGG - chr8_4:3042870-3042889 None:intergenic 45.0%
! CTCTGGTCAGTGCTTCTTTT+TGG - chr8_4:3042933-3042952 None:intergenic 45.0%
CTGACCAGAGATAGATCTTC+TGG + chr8_4:3042943-3042962 Msa1307450:intron 45.0%
! TTTTCAGATACAGACTGGGC+AGG - chr8_4:3042980-3042999 None:intergenic 45.0%
GATGAATGTGATATCTGGCC+TGG + chr8_4:3043138-3043157 Msa1307450:intron 45.0%
CCTGCTTACAGGAGATTGAT+TGG - chr8_4:3043187-3043206 None:intergenic 45.0%
CCAATCAATCTCCTGTAAGC+AGG + chr8_4:3043184-3043203 Msa1307450:intron 45.0%
GATCTTAGCTGGGAACTCTT+TGG - chr8_4:3043452-3043471 None:intergenic 45.0%
TGAAGCAAGCAAGCAGGAAA+TGG - chr8_4:3043597-3043616 None:intergenic 45.0%
! ATGGATTGAAGCAAGCAAGC+AGG - chr8_4:3043603-3043622 None:intergenic 45.0%
AGCAAGAACAATCCTGACTG+TGG + chr8_4:3043774-3043793 Msa1307450:intron 45.0%
ATATCCCTTGGCAACCAATC+TGG + chr8_4:3043852-3043871 Msa1307450:intron 45.0%
! AAAGCCAGATTGGTTGCCAA+GGG - chr8_4:3043859-3043878 None:intergenic 45.0%
! TAAAGCCAGATTGGTTGCCA+AGG - chr8_4:3043860-3043879 None:intergenic 45.0%
ATGCTGATGGTTCCATAGAG+AGG - chr8_4:3043885-3043904 None:intergenic 45.0%
ATGTTAAACCCATAGGCTGC+AGG - chr8_4:3043930-3043949 None:intergenic 45.0%
CAGCCTATGGGTTTAACATG+AGG + chr8_4:3043931-3043950 Msa1307450:intron 45.0%
CCACCTCATGTTAAACCCAT+AGG - chr8_4:3043937-3043956 None:intergenic 45.0%
CCTATGGGTTTAACATGAGG+TGG + chr8_4:3043934-3043953 Msa1307450:intron 45.0%
TGGGTTTAACATGAGGTGGA+AGG + chr8_4:3043938-3043957 Msa1307450:intron 45.0%
CCTTGAGTAAGACTGGTACT+TGG - chr8_4:3043975-3043994 None:intergenic 45.0%
CCAAGTACCAGTCTTACTCA+AGG + chr8_4:3043972-3043991 Msa1307450:intron 45.0%
AGTCTAGTAGAGACTCTGAC+AGG + chr8_4:3044219-3044238 Msa1307450:intron 45.0%
ACAGGTGGAGGAGCAATAAT+AGG + chr8_4:3044237-3044256 Msa1307450:intron 45.0%
GGTGAATTGAGTGAACCATG+AGG + chr8_4:3044294-3044313 Msa1307450:intron 45.0%
GAACCATGAGGTGAATCTTC+TGG + chr8_4:3044306-3044325 Msa1307450:intron 45.0%
ACACCAGAAGATTCACCTCA+TGG - chr8_4:3044312-3044331 None:intergenic 45.0%
GAAATAGGAGAAGTGGGAAG+AGG + chr8_4:3044333-3044352 Msa1307450:intron 45.0%
CTACTTCTGCCATTGATACC+TGG - chr8_4:3044410-3044429 None:intergenic 45.0%
CAGGTATCAATGGCAGAAGT+AGG + chr8_4:3044408-3044427 Msa1307450:intron 45.0%
ATCAATGGCAGAAGTAGGAG+TGG + chr8_4:3044413-3044432 Msa1307450:intron 45.0%
CCAAACTTCAACCTAGAGCA+AGG - chr8_4:3044563-3044582 None:intergenic 45.0%
! CCTTGCTCTAGGTTGAAGTT+TGG + chr8_4:3044560-3044579 Msa1307450:intron 45.0%
GAAGTTTGGTCCTGTGAGAT+TGG + chr8_4:3044574-3044593 Msa1307450:intron 45.0%
CAGGGCCATTATCACTTCTA+AGG + chr8_4:3044907-3044926 Msa1307450:intron 45.0%
!! ATTGGTTTGGCTGATCCTCA+TGG - chr8_4:3045437-3045456 None:intergenic 45.0%
AGCCAAACCAATCATCCTGT+GGG + chr8_4:3045445-3045464 Msa1307450:intron 45.0%
! TACCCACAGGATGATTGGTT+TGG - chr8_4:3045450-3045469 None:intergenic 45.0%
CTGATTACCCACAGGATGAT+TGG - chr8_4:3045455-3045474 None:intergenic 45.0%
ACCAGAGGAAGAAGGGAAAT+TGG + chr8_4:3045808-3045827 Msa1307450:intron 45.0%
CCAGAGGAAGAAGGGAAATT+GGG + chr8_4:3045809-3045828 Msa1307450:intron 45.0%
GTTGACAATTCTCCTCCTAC+TGG - chr8_4:3045944-3045963 None:intergenic 45.0%
!! GCTTGAGTCTTCTGAAACAG+AGG + chr8_4:3046189-3046208 Msa1307450:intron 45.0%
CAGATCTCATAGCTTCACAC+CGG + chr8_4:3046380-3046399 Msa1307450:intron 45.0%
GGACAAGTGCAATTAGGCAT+TGG + chr8_4:3046412-3046431 Msa1307450:intron 45.0%
GAGTTCATCCCAAACGTCAA+TGG + chr8_4:3046576-3046595 Msa1307450:intron 45.0%
TGATTTGAACCGTGATGCGT+GGG - chr8_4:3046686-3046705 None:intergenic 45.0%
ATGATTTGAACCGTGATGCG+TGG - chr8_4:3046687-3046706 None:intergenic 45.0%
CTGGTTCAAATTACCTCGCA+TGG - chr8_4:3046789-3046808 None:intergenic 45.0%
GGAGTAACTACCACAGAGTT+TGG + chr8_4:3046817-3046836 Msa1307450:intron 45.0%
TAGTGAAGGTCCAAACTCTG+TGG - chr8_4:3046830-3046849 None:intergenic 45.0%
ACAGAGTTTGGACCTTCACT+AGG + chr8_4:3046829-3046848 Msa1307450:intron 45.0%
CCAGAGAAGATGAATTGCAG+CGG + chr8_4:3047005-3047024 Msa1307450:intron 45.0%
TCGGAACTCATGTGTCTACT+TGG - chr8_4:3047534-3047553 None:intergenic 45.0%
GAAGACTGGTATGTCGAGAA+AGG - chr8_4:3047751-3047770 None:intergenic 45.0%
GCATAGTATTCGCCTGAACT+AGG - chr8_4:3048217-3048236 None:intergenic 45.0%
AGATGATTTCGGGGGATTTG+AGG + chr8_4:3048246-3048265 Msa1307450:CDS 45.0%
!! TGGTTGGTCTTGGATGATAC+TGG - chr8_4:3048366-3048385 None:intergenic 45.0%
!!! CTTTTTGACATGGTGGTGGT+TGG - chr8_4:3048382-3048401 None:intergenic 45.0%
TTCGAACCTTGGGACTTACC+AGG + chr8_4:3041991-3042010 Msa1307450:CDS 50.0%
GAAGGACACAGTGTGGATAC+TGG + chr8_4:3042177-3042196 Msa1307450:CDS 50.0%
TGTGGATACTGGAAAGCCAC+TGG + chr8_4:3042188-3042207 Msa1307450:CDS 50.0%
TATCACCCTCCAACTTGTGG+GGG - chr8_4:3042524-3042543 None:intergenic 50.0%
GAGTTGCTTCTTTGTCCTCC+AGG + chr8_4:3042892-3042911 Msa1307450:intron 50.0%
GCAAGTCACTCATTTCCTGG+AGG - chr8_4:3042910-3042929 None:intergenic 50.0%
TGGGCAAGTCACTCATTTCC+TGG - chr8_4:3042913-3042932 None:intergenic 50.0%
TTGAAAGGATCTCCAGGTCG+TGG - chr8_4:3043043-3043062 None:intergenic 50.0%
GAATGTGATATCTGGCCTGG+TGG + chr8_4:3043141-3043160 Msa1307450:intron 50.0%
CTTAGCTGGGAACTCTTTGG+AGG - chr8_4:3043449-3043468 None:intergenic 50.0%
GGATTGGAATGTGGAACACC+AGG + chr8_4:3043655-3043674 Msa1307450:intron 50.0%
TTGGAATGTGGAACACCAGG+AGG + chr8_4:3043658-3043677 Msa1307450:intron 50.0%
TGGCTAAGCTTACCACAGTC+AGG - chr8_4:3043789-3043808 None:intergenic 50.0%
ACTGTGGTAAGCTTAGCCAC+TGG + chr8_4:3043790-3043809 Msa1307450:intron 50.0%
TAAACCCACCTGCAGCCTAT+GGG + chr8_4:3043919-3043938 Msa1307450:intron 50.0%
TAAACCCATAGGCTGCAGGT+GGG - chr8_4:3043926-3043945 None:intergenic 50.0%
TTAAACCCATAGGCTGCAGG+TGG - chr8_4:3043927-3043946 None:intergenic 50.0%
CTAGTAGAGACTCTGACAGG+TGG + chr8_4:3044222-3044241 Msa1307450:intron 50.0%
TAGGAGAAGTGGGAAGAGGT+AGG + chr8_4:3044337-3044356 Msa1307450:intron 50.0%
AGGAGAAGTGGGAAGAGGTA+GGG + chr8_4:3044338-3044357 Msa1307450:intron 50.0%
TGAGGGAGTGATATAGTGCC+AGG + chr8_4:3044389-3044408 Msa1307450:intron 50.0%
ATGGCAGAAGTAGGAGTGGA+AGG + chr8_4:3044417-3044436 Msa1307450:intron 50.0%
GTAGGAGTGGAAGGCTGATA+AGG + chr8_4:3044426-3044445 Msa1307450:intron 50.0%
CAGCCAAACCAATCATCCTG+TGG + chr8_4:3045444-3045463 Msa1307450:intron 50.0%
!! GAGGAGTACCAGAGGAAGAA+GGG + chr8_4:3045801-3045820 Msa1307450:intron 50.0%
CCCAATTTCCCTTCTTCCTC+TGG - chr8_4:3045812-3045831 None:intergenic 50.0%
TGCTCCTGAGTCAAACCAGT+AGG + chr8_4:3045926-3045945 Msa1307450:intron 50.0%
TCCTGAGTCAAACCAGTAGG+AGG + chr8_4:3045929-3045948 Msa1307450:intron 50.0%
!! TCCTCCTACTGGTTTGACTC+AGG - chr8_4:3045933-3045952 None:intergenic 50.0%
! GCACTTGTCCTTTTCCATGC+CGG - chr8_4:3046402-3046421 None:intergenic 50.0%
TGAGCACGCCATTGACGTTT+GGG - chr8_4:3046587-3046606 None:intergenic 50.0%
ATGAGCACGCCATTGACGTT+TGG - chr8_4:3046588-3046607 None:intergenic 50.0%
GTGGGAACTGTGCAATCATC+TGG - chr8_4:3046668-3046687 None:intergenic 50.0%
AGATCCATGCAACGTGCACT+TGG - chr8_4:3046763-3046782 None:intergenic 50.0%
CCGCTGCAATTCATCTTCTC+TGG - chr8_4:3047008-3047027 None:intergenic 50.0%
AGCCGAGAAGAAAGCTGAAG+AGG + chr8_4:3047476-3047495 Msa1307450:CDS 50.0%
! TCATTCTCAACGACTCGGAC+TGG - chr8_4:3047978-3047997 None:intergenic 50.0%
TGCAATAGCCCCCCACAAGT+TGG + chr8_4:3042512-3042531 Msa1307450:intron 55.0%
! AATAGCCCCCCACAAGTTGG+AGG + chr8_4:3042515-3042534 Msa1307450:intron 55.0%
! ATAGCCCCCCACAAGTTGGA+GGG + chr8_4:3042516-3042535 Msa1307450:intron 55.0%
ATCACCCTCCAACTTGTGGG+GGG - chr8_4:3042523-3042542 None:intergenic 55.0%
GGGAAGAAGATACCACGACC+TGG + chr8_4:3043028-3043047 Msa1307450:intron 55.0%
GTAAACCCACCTGCAGCCTA+TGG + chr8_4:3043918-3043937 Msa1307450:intron 55.0%
GTAGAGACTCTGACAGGTGG+AGG + chr8_4:3044225-3044244 Msa1307450:intron 55.0%
GGAGAAGTGGGAAGAGGTAG+GGG + chr8_4:3044339-3044358 Msa1307450:intron 55.0%
GAGAAGTGGGAAGAGGTAGG+GGG + chr8_4:3044340-3044359 Msa1307450:intron 55.0%
GGTTTGGCTGATCCTCATGG+TGG - chr8_4:3045434-3045453 None:intergenic 55.0%
!! ACCTGAAGGAGGAGTACCAG+AGG + chr8_4:3045793-3045812 Msa1307450:intron 55.0%
TCCTCTGGTACTCCTCCTTC+AGG - chr8_4:3045797-3045816 None:intergenic 55.0%
!! GGAGGAGTACCAGAGGAAGA+AGG + chr8_4:3045800-3045819 Msa1307450:intron 55.0%
CTCATAGCTTCACACCGGCA+TGG + chr8_4:3046385-3046404 Msa1307450:intron 55.0%
GCTTCACACCGGCATGGAAA+AGG + chr8_4:3046391-3046410 Msa1307450:intron 55.0%
TGCACAGTTCCCACGCATCA+CGG + chr8_4:3046674-3046693 Msa1307450:intron 55.0%
GCATGGATCTACTCCATGCG+AGG + chr8_4:3046773-3046792 Msa1307450:intron 55.0%
!! GACATGGTGGTGGTTGGTCT+TGG - chr8_4:3048376-3048395 None:intergenic 55.0%
ATCTGCACGCGCGCATCGTA+TGG - chr8_4:3046365-3046384 None:intergenic 60.0%
! CTCGGACTGGACAGGAAAGC+TGG - chr8_4:3047965-3047984 None:intergenic 60.0%
! CTCAACGACTCGGACTGGAC+AGG - chr8_4:3047973-3047992 None:intergenic 60.0%
TGCACGCGCGCATCGTATGG+AGG - chr8_4:3046362-3046381 None:intergenic 65.0%
CGCGCCAAGTGCACGTTGCA+TGG + chr8_4:3046756-3046775 Msa1307450:intron 65.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 3041856 3048429 3041856 ID=Msa1307450;Name=Msa1307450
chr8_4 mRNA 3041856 3048429 3041856 ID=Msa1307450-mRNA-1;Parent=Msa1307450;Name=Msa1307450-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0.4|0|1|0.6|0.5|6|0|383
chr8_4 exon 3041856 3042012 3041856 ID=Msa1307450-mRNA-1:exon:883;Parent=Msa1307450-mRNA-1
chr8_4 exon 3042090 3042313 3042090 ID=Msa1307450-mRNA-1:exon:884;Parent=Msa1307450-mRNA-1
chr8_4 exon 3047444 3047590 3047444 ID=Msa1307450-mRNA-1:exon:885;Parent=Msa1307450-mRNA-1
chr8_4 exon 3047673 3047915 3047673 ID=Msa1307450-mRNA-1:exon:886;Parent=Msa1307450-mRNA-1
chr8_4 exon 3047922 3048044 3047922 ID=Msa1307450-mRNA-1:exon:887;Parent=Msa1307450-mRNA-1
chr8_4 exon 3048172 3048429 3048172 ID=Msa1307450-mRNA-1:exon:888;Parent=Msa1307450-mRNA-1
chr8_4 CDS 3041856 3042012 3041856 ID=Msa1307450-mRNA-1:cds;Parent=Msa1307450-mRNA-1
chr8_4 CDS 3042090 3042313 3042090 ID=Msa1307450-mRNA-1:cds;Parent=Msa1307450-mRNA-1
chr8_4 CDS 3047444 3047590 3047444 ID=Msa1307450-mRNA-1:cds;Parent=Msa1307450-mRNA-1
chr8_4 CDS 3047673 3047915 3047673 ID=Msa1307450-mRNA-1:cds;Parent=Msa1307450-mRNA-1
chr8_4 CDS 3047922 3048044 3047922 ID=Msa1307450-mRNA-1:cds;Parent=Msa1307450-mRNA-1
chr8_4 CDS 3048172 3048429 3048172 ID=Msa1307450-mRNA-1:cds;Parent=Msa1307450-mRNA-1
Gene Sequence

>Msa1307450

ATGACAAACTCATTTCCTGTTGGATTCAGATTCCAACCAACAGATGAAGAGCTTGTAAACCACTATCTCAAAAACAAGTTACTTGGTAATGATTCCACTGTCAACAATGTTATAGCTGAAGTTGATGTTTGCAAGTTCGAACCTTGGGACTTACCAGCTTGTTCAATCATAAAATCCGATGATCCAGAATGGTTTTTCTTTTGTCCTCGCGATTACAAATACGCAAATAGTAAAAGGTTTAACAGAAGGACACAGTGTGGATACTGGAAAGCCACTGGTCTTGACCGTAAGATTAAGGTTAGAGGTACAGACAATGTTATTGGGACAAAGAAAACACTTGTGTACTATAATGGTTGTGTTCCTGGTGTTAAAAGCAACTGGAGGACTTTTGTTTTGTGTCACTTGATGAAGAAAGCCGAGAAGAAAGCTGAAGAGGAAACTGATAGAATGGTATGTGATGAAGGGGAGCCAAGTAGACACATGAGTTCCGATCACGAAAATCAAGAAACAGTTGAAGGAATTCCTGATGTAATAAGTGGTACCTTGCCAGAAAATAATATGGAACCAATGTTTCAGGAACCTCATCAGGCTGAAAAGTACTTTCCTTTCTCGACATACCAGTCTTCAATCTCTGAAAATGAGATGGAAGTATCTTTATCGAACTCAGGATTTTATGATTCCGAAAGTGGACACATCGATATGCAGAGTTTTTTTGAAACTATGGAAGAGGAAAATCAGTTCATCAATTCAATGTTAAATGACGGATATTTTGATAATGATATGTATAGCGAACAAAGAAGACACACTTTTGCCAGCTTTCCTGTCCAGTCCGAGTCGTTGAGAATGATTTACTATGGAAGCAGTGGCACAAATGCTGAATTAGTCTCTATGCCGTGTGGCAATGTTCTGGATACTTCAACGGCGCTTCTTGAACATCCTAGTTCAGGCGAATACTATGCATCATTTCGAGATGATTTCGGGGGATTTGAGGCATCATCTTGTGATTCAACTGCAGATAAACCTCTAGAGATGATCAATTGCAATGAAATTTCTAGTGCACCTTCCACTCTACGAAGAAACAATAACCAGTATCATCCAAGACCAACCACCACCATGTCAAAAAGATCTGCTTCAAGACGATCTCAAACATAG
Protein sequence

>Msa1307450

MTNSFPVGFRFQPTDEELVNHYLKNKLLGNDSTVNNVIAEVDVCKFEPWDLPACSIIKSDDPEWFFFCPRDYKYANSKRFNRRTQCGYWKATGLDRKIKVRGTDNVIGTKKTLVYYNGCVPGVKSNWRTFVLCHLMKKAEKKAEEETDRMVCDEGEPSRHMSSDHENQETVEGIPDVISGTLPENNMEPMFQEPHQAEKYFPFSTYQSSISENEMEVSLSNSGFYDSESGHIDMQSFFETMEEENQFINSMLNDGYFDNDMYSEQRRHTFASFPVQSESLRMIYYGSSGTNAELVSMPCGNVLDTSTALLEHPSSGEYYASFRDDFGGFEASSCDSTADKPLEMINCNEISSAPSTLRRNNNQYHPRPTTTMSKRSASRRSQT*