AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1175880

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1175880 MtrunA17_Chr8g0346001 97.005 434 8 1 1 429 1 434 0.0 884
Msa1175880 MtrunA17_Chr4g0018391 46.839 348 134 11 9 341 1 312 3.61e-91 279
Msa1175880 MtrunA17_Chr2g0309331 75.000 168 30 2 11 177 6 162 4.49e-91 279
Msa1175880 MtrunA17_Chr4g0056541 47.605 334 132 8 9 333 1 300 5.32e-90 277
Msa1175880 MtrunA17_Chr4g0017921 73.494 166 32 1 15 180 8 161 1.02e-88 273
Msa1175880 MtrunA17_Chr5g0398971 43.700 373 135 10 9 361 1 318 5.87e-85 263
Msa1175880 MtrunA17_Chr5g0405211 50.980 255 93 3 12 259 5 234 7.49e-85 263
Msa1175880 MtrunA17_Chr8g0372121 50.781 256 109 5 12 267 3 241 5.98e-81 252
Msa1175880 MtrunA17_Chr1g0200561 43.068 339 137 9 6 330 10 306 1.99e-77 244
Msa1175880 MtrunA17_Chr3g0091921 53.714 175 69 4 3 175 2 166 4.39e-58 192
Msa1175880 MtrunA17_Chr4g0060931 48.969 194 76 5 3 193 2 175 1.52e-57 192
Msa1175880 MtrunA17_Chr6g0481091 47.126 174 82 2 15 188 6 169 6.28e-57 187
Msa1175880 MtrunA17_Chr2g0316971 52.096 167 68 4 13 177 21 177 6.18e-56 189
Msa1175880 MtrunA17_Chr5g0417791 44.175 206 105 3 14 219 2 197 1.88e-55 184
Msa1175880 MtrunA17_Chr6g0484441 52.174 161 63 2 15 175 5 151 2.27e-55 186
Msa1175880 MtrunA17_Chr4g0042561 43.810 210 102 5 10 215 4 201 2.33e-55 184
Msa1175880 MtrunA17_Chr2g0309891 49.102 167 76 3 15 181 6 163 3.39e-55 186
Msa1175880 MtrunA17_Chr6g0453451 50.588 170 74 3 14 183 19 178 2.59e-54 183
Msa1175880 MtrunA17_Chr7g0217721 50.549 182 77 3 10 183 14 190 4.84e-54 183
Msa1175880 MtrunA17_Chr3g0139331 49.711 173 71 3 5 175 1 159 8.97e-54 182
Msa1175880 MtrunA17_Chr3g0109821 49.693 163 69 3 15 175 6 157 2.53e-53 189
Msa1175880 MtrunA17_Chr7g0253011 49.444 180 77 4 15 190 17 186 4.59e-53 182
Msa1175880 MtrunA17_Chr1g0147421 48.108 185 77 5 12 192 24 193 5.07e-53 181
Msa1175880 MtrunA17_Chr2g0312321 48.824 170 74 4 12 181 8 164 8.75e-53 179
Msa1175880 MtrunA17_Chr5g0433781 49.693 163 68 3 15 175 6 156 3.79e-52 185
Msa1175880 MtrunA17_Chr2g0318101 40.889 225 114 7 12 228 12 225 4.36e-52 178
Msa1175880 MtrunA17_Chr7g0252971 47.977 173 73 4 12 175 5 169 5.06e-52 177
Msa1175880 MtrunA17_Chr2g0318081 47.879 165 74 2 11 175 12 164 1.12e-51 177
Msa1175880 MtrunA17_Chr6g0461661 49.091 165 72 4 15 177 18 172 9.41e-51 176
Msa1175880 MtrunA17_Chr8g0359921 48.780 164 74 3 12 175 11 164 1.25e-50 174
Msa1175880 MtrunA17_Chr6g0453131 38.667 225 122 6 1 219 1 215 2.17e-50 175
Msa1175880 MtrunA17_Chr3g0124761 45.304 181 89 3 14 194 6 176 2.49e-49 169
Msa1175880 MtrunA17_Chr8g0361731 46.988 166 77 4 17 177 16 175 7.89e-49 171
Msa1175880 MtrunA17_Chr5g0400461 45.789 190 77 6 11 191 2 174 8.70e-49 169
Msa1175880 MtrunA17_Chr3g0130731 39.614 207 109 4 9 212 1 194 1.77e-48 167
Msa1175880 MtrunA17_Chr7g0263931 46.951 164 77 3 14 175 10 165 3.34e-48 167
Msa1175880 MtrunA17_Chr2g0326361 47.059 170 80 3 15 182 14 175 4.39e-48 167
Msa1175880 MtrunA17_Chr7g0217711 54.861 144 62 1 10 153 14 154 5.57e-48 162
Msa1175880 MtrunA17_Chr3g0144271 55.319 141 57 3 15 152 23 160 9.46e-48 169
Msa1175880 MtrunA17_Chr4g0047841 42.553 188 89 5 6 177 6 190 1.84e-47 166
Msa1175880 MtrunA17_Chr2g0311651 45.402 174 86 4 9 175 15 186 1.89e-47 165
Msa1175880 MtrunA17_Chr4g0054791 45.055 182 83 4 13 189 4 173 3.65e-47 164
Msa1175880 MtrunA17_Chr7g0214071 47.093 172 72 4 7 176 7 161 5.09e-47 162
Msa1175880 MtrunA17_Chr1g0183741 44.848 165 73 3 13 175 8 156 6.20e-47 162
Msa1175880 MtrunA17_Chr5g0417001 46.429 168 78 4 15 177 14 174 1.08e-46 165
Msa1175880 MtrunA17_Chr8g0384721 43.750 176 82 4 9 180 1 163 1.90e-46 161
Msa1175880 MtrunA17_Chr7g0261411 44.785 163 72 3 13 173 8 154 9.40e-46 160
Msa1175880 MtrunA17_Chr5g0428991 45.930 172 83 2 7 178 17 178 1.43e-45 167
Msa1175880 MtrunA17_Chr1g0197351 43.850 187 96 4 17 203 44 221 1.67e-45 164
Msa1175880 MtrunA17_Chr2g0311661 45.238 168 83 4 15 175 20 185 5.55e-44 155
Msa1175880 MtrunA17_Chr3g0092671 48.125 160 71 4 17 175 7 155 6.15e-44 160
Msa1175880 MtrunA17_Chr1g0197361 45.625 160 75 3 17 175 10 158 9.62e-44 161
Msa1175880 MtrunA17_Chr8g0364791 43.558 163 76 3 17 176 8 157 1.05e-43 158
Msa1175880 MtrunA17_Chr5g0442771 43.293 164 87 2 15 175 18 178 2.08e-43 154
Msa1175880 MtrunA17_Chr1g0201021 49.231 130 65 1 17 146 21 149 4.28e-43 159
Msa1175880 MtrunA17_Chr3g0128111 44.382 178 84 5 18 193 45 209 4.40e-43 151
Msa1175880 MtrunA17_Chr4g0038751 45.714 175 75 4 17 188 17 174 8.89e-43 152
Msa1175880 MtrunA17_Chr3g0130101 43.125 160 81 2 17 176 9 158 1.05e-42 154
Msa1175880 MtrunA17_Chr3g0128151 44.970 169 83 2 7 175 14 172 1.71e-42 157
Msa1175880 MtrunA17_Chr8g0384201 42.945 163 77 3 17 176 8 157 7.32e-42 154
Msa1175880 MtrunA17_Chr4g0076731 42.593 162 78 3 15 175 54 201 7.85e-41 150
Msa1175880 MtrunA17_Chr3g0131911 40.449 178 94 3 3 176 2 171 6.29e-39 140
Msa1175880 MtrunA17_Chr8g0385991 41.899 179 87 5 3 176 2 168 8.85e-39 139
Msa1175880 MtrunA17_Chr3g0113001 47.945 146 66 3 64 208 14 150 1.47e-36 135
Msa1175880 MtrunA17_Chr4g0026141 38.172 186 100 6 16 195 6 182 3.15e-33 125
Msa1175880 MtrunA17_Chr2g0321631 39.665 179 84 8 16 183 5 170 7.59e-33 124
Msa1175880 MtrunA17_Chr3g0113031 48.837 129 60 2 81 208 3 126 3.05e-32 123
Msa1175880 MtrunA17_Chr8g0345671 32.188 320 163 14 15 310 11 300 1.16e-31 124
Msa1175880 MtrunA17_Chr4g0050701 37.423 163 86 4 15 175 11 159 3.36e-29 112
Msa1175880 MtrunA17_Chr2g0321741 41.129 124 66 2 29 147 1 122 8.86e-29 115
Msa1175880 MtrunA17_Chr7g0266701 35.829 187 108 5 15 195 4 184 1.46e-28 112
Msa1175880 MtrunA17_Chr8g0345691 40.123 162 78 6 14 172 11 156 3.76e-28 115
Msa1175880 MtrunA17_Chr8g0345711 38.323 167 90 7 15 173 12 173 9.29e-27 105
Msa1175880 MtrunA17_Chr7g0243371 50.617 81 38 1 71 149 17 97 2.06e-22 92.0
Msa1175880 MtrunA17_Chr8g0345731 38.562 153 79 7 15 158 24 170 5.04e-22 92.4
Msa1175880 MtrunA17_Chr8g0345721 33.908 174 81 6 18 160 38 208 1.06e-20 90.1
Msa1175880 MtrunA17_Chr8g0345741 42.017 119 64 4 26 141 2 118 1.07e-19 85.5
Msa1175880 MtrunA17_Chr8g0345701 36.986 146 71 6 13 141 5 146 1.24e-19 85.9
Msa1175880 MtrunA17_Chr3g0130321 32.934 167 94 7 14 174 6 160 1.95e-18 83.6
Msa1175880 MtrunA17_Chr8g0384351 30.723 166 83 7 14 179 9 142 6.32e-18 81.3
Msa1175880 MtrunA17_Chr1g0168571 32.121 165 89 8 23 179 13 162 7.16e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1175880 AT2G46770.1 52.164 439 123 10 1 428 2 364 3.56e-137 398
Msa1175880 AT3G61910.1 47.031 421 128 10 5 418 1 333 7.18e-113 335
Msa1175880 AT1G32770.1 50.000 346 115 8 1 333 1 301 2.26e-103 311
Msa1175880 AT1G79580.3 73.295 176 34 3 6 180 8 171 3.52e-90 278
Msa1175880 AT1G79580.5 73.295 176 34 3 6 180 8 171 3.52e-90 278
Msa1175880 AT1G79580.4 73.295 176 34 3 6 180 8 171 3.52e-90 278
Msa1175880 AT1G79580.2 73.295 176 34 3 6 180 8 171 3.52e-90 278
Msa1175880 AT1G79580.1 73.295 176 34 3 6 180 8 171 3.52e-90 278
Msa1175880 AT4G10350.1 68.132 182 47 2 5 186 1 171 7.61e-88 271
Msa1175880 AT2G18060.3 45.345 333 138 9 15 337 9 307 3.40e-87 270
Msa1175880 AT2G18060.1 45.345 333 138 9 15 337 9 307 3.40e-87 270
Msa1175880 AT4G36160.2 46.647 343 138 10 8 338 7 316 4.96e-87 270
Msa1175880 AT4G36160.1 46.647 343 138 10 8 338 3 312 7.38e-87 270
Msa1175880 AT4G36160.3 46.647 343 138 10 8 338 3 312 7.38e-87 270
Msa1175880 AT1G12260.1 40.319 439 175 13 9 405 1 394 6.65e-86 268
Msa1175880 AT1G33280.1 69.461 167 39 1 15 181 8 162 7.65e-86 265
Msa1175880 AT1G62700.1 41.432 391 165 8 9 362 1 364 1.64e-82 259
Msa1175880 AT1G62700.2 41.432 391 165 8 9 362 1 364 1.64e-82 259
Msa1175880 AT1G12260.2 41.337 404 167 13 9 405 1 341 3.51e-82 256
Msa1175880 AT5G66300.1 47.253 273 95 7 5 259 2 243 2.19e-80 250
Msa1175880 AT5G62380.2 41.983 343 121 9 13 332 5 292 2.43e-76 241
Msa1175880 AT5G62380.1 41.983 343 121 9 13 332 5 292 2.43e-76 241
Msa1175880 AT1G71930.2 65.854 164 45 1 12 175 6 158 7.04e-76 239
Msa1175880 AT1G71930.1 65.854 164 45 1 12 175 6 158 7.04e-76 239
Msa1175880 AT3G18400.1 54.118 170 63 3 12 180 2 157 1.72e-59 197
Msa1175880 AT3G17730.1 50.000 172 72 3 15 184 6 165 8.19e-58 190
Msa1175880 AT1G69490.1 48.066 181 86 2 7 187 1 173 1.39e-56 187
Msa1175880 AT5G07680.1 53.659 164 66 3 12 175 14 167 3.08e-56 189
Msa1175880 AT5G07680.2 54.037 161 64 3 15 175 3 153 4.28e-56 188
Msa1175880 AT2G24430.2 51.205 166 66 3 12 175 13 165 6.79e-56 187
Msa1175880 AT2G24430.1 51.205 166 66 3 12 175 13 165 6.79e-56 187
Msa1175880 AT3G04070.2 48.913 184 82 5 7 185 2 178 1.21e-55 187
Msa1175880 AT4G10350.2 66.142 127 34 1 60 186 7 124 2.24e-55 186
Msa1175880 AT5G61430.1 52.439 164 68 3 12 175 13 166 5.91e-55 186
Msa1175880 AT5G39610.1 52.469 162 67 3 15 176 20 171 6.40e-55 184
Msa1175880 AT3G04070.1 47.475 198 80 6 7 185 2 194 2.53e-54 185
Msa1175880 AT3G15170.1 53.374 163 64 4 12 172 17 169 8.06e-54 182
Msa1175880 AT1G76420.1 50.307 163 66 3 15 175 22 171 1.14e-53 182
Msa1175880 AT5G17260.1 45.055 182 88 3 15 196 6 175 1.17e-53 186
Msa1175880 AT3G03200.1 38.843 242 115 5 15 235 6 235 1.23e-53 186
Msa1175880 AT3G12977.1 47.674 172 79 2 12 183 15 175 2.71e-53 179
Msa1175880 AT1G65910.1 48.466 163 70 3 15 175 6 156 1.39e-52 186
Msa1175880 AT4G27410.2 49.390 164 71 3 12 175 11 162 2.18e-52 177
Msa1175880 AT3G29035.1 58.088 136 54 1 15 150 24 156 3.65e-52 178
Msa1175880 AT5G53950.1 51.786 168 68 5 11 175 12 169 5.62e-52 179
Msa1175880 AT1G54330.1 52.761 163 60 4 15 175 6 153 1.07e-51 176
Msa1175880 AT5G18270.2 50.000 164 71 4 15 177 21 174 1.29e-51 177
Msa1175880 AT1G56010.2 49.091 165 74 3 12 175 16 171 1.76e-51 176
Msa1175880 AT5G18270.1 49.390 164 72 4 15 177 21 174 2.52e-51 176
Msa1175880 AT5G46590.1 51.149 174 70 5 11 181 2 163 4.54e-51 174
Msa1175880 AT3G04060.1 50.617 162 69 4 15 175 20 171 2.51e-50 174
Msa1175880 AT1G61110.1 45.562 169 85 3 11 175 12 177 6.31e-50 172
Msa1175880 AT5G46590.2 55.263 152 61 4 11 158 2 150 1.33e-49 170
Msa1175880 AT4G27410.3 45.506 178 74 3 12 175 11 179 1.01e-48 169
Msa1175880 AT3G15500.1 46.667 165 76 3 12 176 11 163 1.04e-48 169
Msa1175880 AT5G63790.1 44.199 181 91 4 9 188 44 215 3.03e-48 167
Msa1175880 AT5G63790.2 44.199 181 91 4 9 188 54 225 3.11e-48 167
Msa1175880 AT1G52890.1 45.783 166 78 3 12 177 11 164 7.27e-48 166
Msa1175880 AT2G43000.1 47.170 159 73 2 17 175 20 167 1.94e-47 164
Msa1175880 AT3G10490.1 44.615 195 90 6 13 204 25 204 2.21e-47 163
Msa1175880 AT5G13180.1 45.455 176 78 4 3 176 2 161 2.67e-47 163
Msa1175880 AT1G77450.1 41.538 195 102 4 14 208 9 191 2.81e-47 163
Msa1175880 AT5G04410.1 46.626 163 77 2 13 175 7 159 3.19e-47 171
Msa1175880 AT3G10480.2 48.538 171 74 4 17 187 29 185 5.09e-47 167
Msa1175880 AT3G10500.1 46.012 163 78 2 13 175 7 159 5.56e-47 169
Msa1175880 AT1G26870.1 46.012 163 83 2 17 177 18 177 6.25e-47 167
Msa1175880 AT5G08790.1 46.707 167 79 4 15 180 7 164 6.48e-47 163
Msa1175880 AT2G33480.1 44.318 176 83 2 1 176 1 161 8.54e-47 162
Msa1175880 AT5G39820.1 41.799 189 77 4 15 181 20 197 9.09e-47 164
Msa1175880 AT3G10480.1 48.538 171 75 5 17 187 29 186 1.03e-46 167
Msa1175880 AT3G15510.1 45.562 169 85 4 19 183 21 186 1.55e-46 164
Msa1175880 AT1G01720.1 46.012 163 79 3 14 176 6 159 3.46e-46 161
Msa1175880 AT3G10490.2 45.550 191 86 6 17 204 29 204 3.64e-46 166
Msa1175880 AT4G17980.1 46.512 172 72 5 11 175 2 160 7.42e-46 159
Msa1175880 AT1G33060.2 43.005 193 81 4 15 207 24 187 1.29e-45 167
Msa1175880 AT1G33060.1 43.005 193 81 4 15 207 24 187 1.33e-45 167
Msa1175880 AT2G33480.2 44.318 176 81 3 1 176 1 159 1.42e-45 159
Msa1175880 AT4G17980.2 46.512 172 72 5 11 175 2 160 1.84e-45 159
Msa1175880 AT1G32510.1 45.143 175 76 5 13 178 4 167 3.59e-45 158
Msa1175880 AT5G24590.2 43.889 180 90 3 7 185 5 174 5.19e-45 162
Msa1175880 AT4G35580.1 46.012 163 78 2 15 177 9 161 5.22e-44 161
Msa1175880 AT4G35580.3 46.012 163 78 2 15 177 9 161 5.92e-44 161
Msa1175880 AT4G35580.2 46.012 163 78 2 15 177 9 161 6.58e-44 161
Msa1175880 AT3G49530.2 44.000 175 85 5 4 176 2 165 6.60e-43 155
Msa1175880 AT5G09330.5 41.818 165 86 2 11 175 2 156 7.35e-43 157
Msa1175880 AT5G09330.2 41.818 165 86 2 11 175 2 156 7.35e-43 157
Msa1175880 AT5G09330.4 41.818 165 86 2 11 175 2 156 7.35e-43 157
Msa1175880 AT5G09330.3 41.818 165 86 2 11 175 2 156 7.35e-43 157
Msa1175880 AT5G09330.1 41.818 165 86 2 11 175 2 156 7.35e-43 157
Msa1175880 AT3G49530.1 44.000 175 85 5 4 176 2 165 1.23e-42 156
Msa1175880 AT1G52880.1 47.239 163 78 3 19 177 21 179 2.99e-42 152
Msa1175880 AT2G02450.1 40.206 194 100 4 15 206 51 230 3.27e-42 153
Msa1175880 AT5G64060.1 41.212 165 87 2 11 175 2 156 4.14e-42 152
Msa1175880 AT3G10480.3 40.930 215 80 7 6 187 19 219 4.53e-42 155
Msa1175880 AT2G02450.2 40.206 194 100 4 15 206 51 230 5.25e-42 153
Msa1175880 AT1G34180.3 47.287 129 67 1 17 145 18 145 5.02e-41 151
Msa1175880 AT1G34190.1 46.154 130 69 1 17 146 18 146 1.04e-40 152
Msa1175880 AT4G28530.1 41.209 182 71 5 13 175 8 172 1.14e-40 148
Msa1175880 AT1G34180.1 47.287 129 67 1 17 145 18 145 1.38e-40 152
Msa1175880 AT2G27300.1 40.000 170 81 3 5 174 7 155 4.57e-40 146
Msa1175880 AT2G17040.1 41.765 170 79 4 17 183 8 160 6.47e-40 144
Msa1175880 AT1G34180.4 44.286 140 67 1 17 145 18 157 9.86e-40 148
Msa1175880 AT1G34180.2 44.286 140 67 1 17 145 18 157 2.41e-39 149
Msa1175880 AT5G22290.1 38.554 166 85 2 13 178 19 167 1.45e-37 140
Msa1175880 AT3G12910.1 43.750 176 69 7 17 175 23 185 8.75e-37 137
Msa1175880 AT5G04395.1 46.622 148 66 3 12 146 25 172 1.49e-36 132
Msa1175880 AT1G56010.1 55.340 103 40 1 73 175 8 104 1.48e-35 132
Msa1175880 AT3G12977.2 47.581 124 54 2 60 183 10 122 4.32e-35 130
Msa1175880 AT5G61430.2 54.286 105 41 2 71 175 6 103 7.60e-35 130
Msa1175880 AT3G44290.2 42.400 125 70 1 17 141 16 138 1.24e-34 129
Msa1175880 AT3G44290.1 42.400 125 70 1 17 141 16 138 6.24e-34 130
Msa1175880 AT1G32870.2 39.884 173 89 5 5 175 1 160 1.94e-33 132
Msa1175880 AT1G32870.1 39.884 173 89 5 5 175 1 160 2.29e-33 132
Msa1175880 AT1G32870.3 39.884 173 89 5 5 175 37 196 4.20e-33 131
Msa1175880 AT2G18060.2 34.630 257 114 9 96 337 2 219 6.95e-33 125
Msa1175880 AT2G33480.3 46.226 106 48 1 71 176 8 104 7.58e-28 110
Msa1175880 AT5G22380.1 38.776 147 80 5 14 153 4 147 1.36e-24 102
Msa1175880 AT3G44350.2 34.302 172 96 7 18 183 8 168 4.07e-24 100
Msa1175880 AT5G64530.1 34.524 168 88 6 15 175 3 155 4.45e-24 99.0
Msa1175880 AT5G64530.2 40.602 133 62 5 15 145 3 120 1.85e-23 96.7
Msa1175880 AT3G44350.1 38.571 140 77 5 18 151 8 144 2.89e-23 95.9
Msa1175880 AT4G28530.2 39.552 134 58 4 13 127 8 137 5.45e-23 99.4
Msa1175880 AT3G04420.2 40.152 132 68 3 16 141 4 130 5.68e-23 98.6
Msa1175880 AT1G02230.1 42.222 135 61 6 16 141 4 130 8.80e-23 99.4
Msa1175880 AT3G04420.1 40.152 132 68 3 16 141 4 130 1.33e-22 98.6
Msa1175880 AT2G43000.2 45.833 96 44 1 80 175 2 89 2.58e-22 94.4
Msa1175880 AT4G01520.1 35.606 132 81 2 16 143 5 136 2.03e-21 94.4
Msa1175880 AT4G01540.3 36.641 131 77 3 18 143 7 136 2.82e-21 95.9
Msa1175880 AT4G01540.4 36.641 131 77 3 18 143 7 136 4.71e-21 94.7
Msa1175880 AT1G02250.1 28.155 309 170 14 16 309 4 275 4.81e-21 94.4
Msa1175880 AT4G01540.1 36.641 131 77 3 18 143 7 136 5.31e-21 95.5
Msa1175880 AT4G01540.2 36.641 131 77 3 18 143 7 136 6.08e-21 94.7
Msa1175880 AT4G01550.1 37.692 130 76 3 18 143 7 135 2.35e-20 93.6
Msa1175880 AT3G10490.4 42.735 117 50 5 91 204 2 104 2.07e-19 89.4
Msa1175880 AT3G10490.3 42.735 117 50 5 91 204 2 104 2.07e-19 89.4
Msa1175880 AT1G02220.1 36.025 161 84 6 14 165 2 152 2.32e-19 89.7
Msa1175880 AT5G50820.1 33.099 142 79 5 7 143 8 138 4.26e-17 79.7
Msa1175880 AT5G14000.2 33.094 139 86 2 7 143 7 140 6.51e-17 78.2
Msa1175880 AT1G01010.1 36.496 137 74 6 18 144 6 139 2.07e-16 81.3
Msa1175880 AT5G14000.1 33.094 139 86 2 7 143 7 140 2.52e-16 77.8
Msa1175880 AT5G22290.2 37.805 82 36 1 97 178 2 68 3.00e-13 69.7
Msa1175880 AT3G56530.1 27.848 158 110 2 3 158 40 195 4.30e-13 70.5
Msa1175880 AT3G04430.1 35.075 134 70 6 21 141 6 135 1.73e-11 63.5

Find 129 sgRNAs with CRISPR-Local

Find 304 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTCCATGCTTGTTGATTT+TGG 0.074213 8_1:-7481015 None:intergenic
TTACAGAATATATGTTAAAT+TGG 0.215456 8_1:+7481685 Msa1175880:three_prime_UTR
GAGAAAGAAGAAGAATAAAA+AGG 0.224099 8_1:-7481555 None:intergenic
GCAAATTACAATAATAATTA+TGG 0.234766 8_1:+7480904 Msa1175880:CDS
GTACCTCAATATTATGCTTT+TGG 0.254671 8_1:+7481789 Msa1175880:three_prime_UTR
AAGTTGATGATGATGATTTA+AGG 0.268850 8_1:-7481329 None:intergenic
CTCAAGTTCCTCCTGGATTC+CGG 0.279380 8_1:+7479956 Msa1175880:CDS
GCGCTACAGCCGCAGGGTTC+TGG 0.282580 8_1:+7480384 Msa1175880:CDS
AACATGAGCATATCTGTTAA+TGG 0.305797 8_1:+7479928 Msa1175880:CDS
ATGGACAAACTGAGGCTTCT+AGG 0.319602 8_1:+7481238 Msa1175880:CDS
TTTGTAGAGAAATGCAAAAT+AGG 0.328623 8_1:+7480287 Msa1175880:intron
GCTCATGTTATCAGGCATTA+AGG 0.334403 8_1:-7479914 None:intergenic
TTATATATAGCAATGGAAAA+AGG 0.350881 8_1:+7480429 Msa1175880:CDS
GTGATGGTGGTCTTACTAAT+TGG 0.352073 8_1:+7481181 Msa1175880:CDS
ACAGATATGCTCATGTTATC+AGG 0.354451 8_1:-7479922 None:intergenic
TTGGATACTTCTTGTCTTTG+TGG 0.355797 8_1:-7480343 None:intergenic
CCTCTCCAGAAGGGCTGTCT+AGG 0.360170 8_1:-7480783 None:intergenic
TCTTACTAATTGGGTAGCTT+TGG 0.361121 8_1:+7481191 Msa1175880:CDS
GGAGCAAATACTTCAACAAA+TGG 0.371761 8_1:+7480852 Msa1175880:CDS
CTTGTTGCTTCTCAATTGAA+TGG 0.385288 8_1:+7481219 Msa1175880:CDS
AAAACCCTAGACAGCCCTTC+TGG 0.397489 8_1:+7480778 Msa1175880:CDS
AACTGAGGCTTCTAGGCAAT+TGG 0.397982 8_1:+7481245 Msa1175880:CDS
GATGATGATGATGCCTCTAA+TGG 0.411646 8_1:-7481141 None:intergenic
TTTCTTCCTCAAGTCAATAA+GGG 0.412726 8_1:+7481653 Msa1175880:three_prime_UTR
CTTCTTCAGTTGGATGAAAC+CGG 0.420245 8_1:-7479975 None:intergenic
TACTTGTGATGAAGGAGCTT+TGG 0.423237 8_1:+7480831 Msa1175880:CDS
TGCTTTAATGACCCCACAAT+GGG 0.424079 8_1:+7481270 Msa1175880:CDS
ACTTACCAGATTGGTGTCAT+TGG 0.428069 8_1:-7480552 None:intergenic
CATGGTTAATAATCCATTAG+AGG 0.428212 8_1:+7481128 Msa1175880:CDS
TAATGAGGTGGTGTGTGTAC+TGG 0.438957 8_1:-7479757 None:intergenic
GTATCTAATACTTACCAGAT+TGG 0.444383 8_1:-7480561 None:intergenic
CCCTGCGGCTGTAGCGCGAT+TGG 0.449718 8_1:-7480378 None:intergenic
TGAAGAAGCTCTTCTTCAGT+TGG 0.456200 8_1:-7479985 None:intergenic
TGAGAGAACACATTCAAAAC+AGG 0.456774 8_1:-7479810 None:intergenic
CTTCTTCTTCCCTCTCCAGA+AGG 0.463749 8_1:-7480793 None:intergenic
CACCACCAATGACACCAATC+TGG 0.467050 8_1:+7480547 Msa1175880:CDS
TGATGGTGGTCTTACTAATT+GGG 0.469019 8_1:+7481182 Msa1175880:CDS
GAACAACTCCACAAAATGAT+TGG 0.470282 8_1:+7480309 Msa1175880:CDS
TCAAAACAGGTAGGAAAGAA+AGG 0.471456 8_1:-7479797 None:intergenic
ACCAATCGCGCTACAGCCGC+AGG 0.471757 8_1:+7480377 Msa1175880:CDS
AACAATGAGAACAACAATGA+TGG 0.475096 8_1:+7481036 Msa1175880:CDS
AGACTATATATATGTGTTGT+GGG 0.475640 8_1:-7479717 None:intergenic
AGTTGATGATGATGATTTAA+GGG 0.477571 8_1:-7481328 None:intergenic
TTCTTCTTCCCTCTCCAGAA+GGG 0.478150 8_1:-7480792 None:intergenic
CTAATTGGGTAGCTTTGGAT+AGG 0.478615 8_1:+7481196 Msa1175880:CDS
ATGGTGGTCAAGAAGAAGGA+TGG 0.479948 8_1:+7480719 Msa1175880:CDS
GGACAATCTCAAGTTCCTCC+TGG 0.485001 8_1:+7479949 Msa1175880:CDS
CTCTCCAGAAGGGCTGTCTA+GGG 0.487859 8_1:-7480782 None:intergenic
TGCAATTATTCAAGTAGATA+CGG 0.489030 8_1:+7481065 Msa1175880:CDS
GTTGGATGAAACCGGAATCC+AGG 0.489389 8_1:-7479967 None:intergenic
AAAGACAAGAAGTATCCAAC+TGG 0.490628 8_1:+7480347 Msa1175880:CDS
GATACGGCTAATGAAAATGA+AGG 0.497069 8_1:+7481081 Msa1175880:CDS
CTTGAACCATGGGACATTCA+AGG 0.497760 8_1:+7480081 Msa1175880:CDS
AAGAAGGATGGGTGGTGTGT+AGG 0.502710 8_1:+7480731 Msa1175880:CDS
CGATTGGTTCGTGTTCCAGT+TGG 0.503355 8_1:-7480362 None:intergenic
ATCTATTTCACAATCGAACA+AGG 0.511378 8_1:-7481581 None:intergenic
GAGCAAATACTTCAACAAAT+GGG 0.518882 8_1:+7480853 Msa1175880:CDS
TACAAAGGTCGTGCTCCTCA+TGG 0.519789 8_1:+7480479 Msa1175880:CDS
TTAGTGCAATATCCCATTGT+GGG 0.521916 8_1:-7481282 None:intergenic
ATATATAACTTTGTCACGAC+CGG 0.533759 8_1:-7480414 None:intergenic
ATATGTGTTGTGGGACAGAA+AGG 0.533889 8_1:-7479708 None:intergenic
AAGACTATATATATGTGTTG+TGG 0.534251 8_1:-7479718 None:intergenic
TACCAGATTGGTGTCATTGG+TGG 0.534532 8_1:-7480549 None:intergenic
GTTCCAGAGGTCAATCTCAC+TGG 0.538763 8_1:-7481436 None:intergenic
GGTGATGGTGGTCAAGAAGA+AGG 0.538922 8_1:+7480715 Msa1175880:CDS
CACAAGTATCATACAAGTGA+TGG 0.540165 8_1:-7480816 None:intergenic
AGAGGCATCATCATCATCAA+TGG 0.541656 8_1:+7481146 Msa1175880:CDS
AGCTTCTTCAATATTACTTG+AGG 0.541708 8_1:+7479998 Msa1175880:CDS
CTAGACAGCCCTTCTGGAGA+GGG 0.547964 8_1:+7480784 Msa1175880:CDS
TATAATCCCTTATTGACTTG+AGG 0.548718 8_1:-7481659 None:intergenic
TTGCCAAAAGCATAATATTG+AGG 0.552624 8_1:-7481792 None:intergenic
ATTACAATAATAATTATGGA+AGG 0.553899 8_1:+7480908 Msa1175880:CDS
ATAATTATGGAAGGTTTGCA+AGG 0.557854 8_1:+7480917 Msa1175880:CDS
CTCTGATCATCATCATAACA+TGG 0.564367 8_1:+7481110 Msa1175880:CDS
GACAAAGTTATATATAGCAA+TGG 0.565094 8_1:+7480422 Msa1175880:CDS
TTGTTGAGAGTAGATTCAAA+AGG 0.565100 8_1:-7480940 None:intergenic
ATCTCAACAAGCTTGAACCA+TGG 0.570034 8_1:+7480070 Msa1175880:CDS
GAGTCCAAAATCAACAAGCA+TGG 0.570658 8_1:+7481011 Msa1175880:CDS
GTAGCAAAAGAAGATAAGCT+AGG 0.574439 8_1:-7479875 None:intergenic
TAGGAAAGAAAGGAAAGGAA+AGG 0.575917 8_1:-7479787 None:intergenic
TTGTATGATACTTGTGATGA+AGG 0.576333 8_1:+7480823 Msa1175880:CDS
AGGAAAGGTGAAAGATAATG+AGG 0.576981 8_1:-7479772 None:intergenic
TATCTACTTGAATAATTGCA+TGG 0.578399 8_1:-7481062 None:intergenic
GATGATGATGATTTAAGGGT+GGG 0.578828 8_1:-7481324 None:intergenic
TGGTGGTCAAGAAGAAGGAT+GGG 0.580328 8_1:+7480720 Msa1175880:CDS
ATATTACCTTGAATGTCCCA+TGG 0.582876 8_1:-7480087 None:intergenic
ACAATGAGAACAACAATGAT+GGG 0.583551 8_1:+7481037 Msa1175880:CDS
TCTCAACAAGCTTGAACCAT+GGG 0.584241 8_1:+7480071 Msa1175880:CDS
ACAAATGGGAAGGGGTTGCA+AGG 0.584361 8_1:+7480867 Msa1175880:CDS
ATGGTGGTTATAATAATGAA+AGG 0.589878 8_1:+7480965 Msa1175880:CDS
AAATACTTCAACAAATGGGA+AGG 0.591385 8_1:+7480857 Msa1175880:CDS
TCAATTGAATGGACAAACTG+AGG 0.592361 8_1:+7481230 Msa1175880:CDS
AATACTTCAACAAATGGGAA+GGG 0.596086 8_1:+7480858 Msa1175880:CDS
ATGCCAGTGAGATTGACCTC+TGG 0.596304 8_1:+7481433 Msa1175880:CDS
CCTAGACAGCCCTTCTGGAG+AGG 0.596746 8_1:+7480783 Msa1175880:CDS
ATTAGTGCAATATCCCATTG+TGG 0.600538 8_1:-7481283 None:intergenic
TTAAGGTAACTAAGAGAGAG+TGG 0.601640 8_1:-7479897 None:intergenic
GAATCTACTCTCAACAACAA+TGG 0.604976 8_1:+7480946 Msa1175880:CDS
TTGCTTTAATGACCCCACAA+TGG 0.606154 8_1:+7481269 Msa1175880:CDS
CAACATCACGAATAACATCA+AGG 0.607029 8_1:-7480047 None:intergenic
GCAGGGTTCTGGAAAGCCAC+CGG 0.607542 8_1:+7480395 Msa1175880:CDS
ATACTTCAACAAATGGGAAG+GGG 0.611109 8_1:+7480859 Msa1175880:CDS
TGATGATGATGATTTAAGGG+TGG 0.618237 8_1:-7481325 None:intergenic
ACAGGTAGGAAAGAAAGGAA+AGG 0.621168 8_1:-7479792 None:intergenic
TATAACTTTGTCACGACCGG+TGG 0.623261 8_1:-7480411 None:intergenic
GTGTCGAATATGATTGGTGA+TGG 0.624396 8_1:+7480700 Msa1175880:CDS
CTCACTGGCATAGTCATGTG+AGG 0.627225 8_1:-7481421 None:intergenic
ATGGTGATAGCATGTGGTGA+TGG 0.628336 8_1:+7481165 Msa1175880:CDS
TAAGCTAGGTAGCTATGTAG+TGG 0.632683 8_1:-7479861 None:intergenic
TCGAATATGATTGGTGATGG+TGG 0.634462 8_1:+7480703 Msa1175880:CDS
GTGATAGCATGTGGTGATGG+TGG 0.637758 8_1:+7481168 Msa1175880:CDS
GTACTGGAATGAGTATGTAA+AGG 0.639542 8_1:-7479741 None:intergenic
TCTATTTCACAATCGAACAA+GGG 0.644118 8_1:-7481580 None:intergenic
AGAACACATTCAAAACAGGT+AGG 0.646739 8_1:-7479806 None:intergenic
TCACTGGCATAGTCATGTGA+GGG 0.651790 8_1:-7481420 None:intergenic
CCAATCGCGCTACAGCCGCA+GGG 0.651911 8_1:+7480378 Msa1175880:CDS
TCTACTCTCAACAACAATGG+TGG 0.656048 8_1:+7480949 Msa1175880:CDS
TGGTCAAGAAGAAGGATGGG+TGG 0.660445 8_1:+7480723 Msa1175880:CDS
ATACGGCTAATGAAAATGAA+GGG 0.665501 8_1:+7481082 Msa1175880:CDS
TTGATCGAGCAAAGTTCCAG+AGG 0.677993 8_1:-7481449 None:intergenic
TAGTGCAATATCCCATTGTG+GGG 0.681689 8_1:-7481281 None:intergenic
AAAGGTGAAAGATAATGAGG+TGG 0.692128 8_1:-7479769 None:intergenic
TAGTGGTTCTAGATTCACAA+GGG 0.694470 8_1:-7479844 None:intergenic
GTAGTGGTTCTAGATTCACA+AGG 0.706064 8_1:-7479845 None:intergenic
GGATGAAACCGGAATCCAGG+AGG 0.718093 8_1:-7479964 None:intergenic
TCATCAATGGTGATAGCATG+TGG 0.720641 8_1:+7481159 Msa1175880:CDS
GTATTCGACACGTGACACAG+TGG 0.748440 8_1:-7481498 None:intergenic
GGTGGCTTTCCAGAACCCTG+CGG 0.771672 8_1:-7480393 None:intergenic
TTCAGAAGATGACAACAACG+AGG 0.812789 8_1:-7481475 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TACTTATATAGTAAATAAAT+TGG + chr8_1:7480643-7480662 Msa1175880:intron 10.0%
!! TACTTATATAGTAAATAAAT+TGG + chr8_1:7480643-7480662 Msa1175880:intron 10.0%
!! ATGAATGAAGAAATAAATAA+AGG - chr8_1:7480134-7480153 None:intergenic 15.0%
!! GCAAATTACAATAATAATTA+TGG + chr8_1:7480904-7480923 Msa1175880:CDS 15.0%
!! ATTACAATAATAATTATGGA+AGG + chr8_1:7480908-7480927 Msa1175880:CDS 15.0%
!! TTACAGAATATATGTTAAAT+TGG + chr8_1:7481685-7481704 Msa1175880:three_prime_UTR 15.0%
!! ATGAATGAAGAAATAAATAA+AGG - chr8_1:7480134-7480153 None:intergenic 15.0%
!! GCAAATTACAATAATAATTA+TGG + chr8_1:7480904-7480923 Msa1175880:CDS 15.0%
!! ATTACAATAATAATTATGGA+AGG + chr8_1:7480908-7480927 Msa1175880:CDS 15.0%
!! TTACAGAATATATGTTAAAT+TGG + chr8_1:7481685-7481704 Msa1175880:three_prime_UTR 15.0%
!! TAAATCAAAGGAATAAAGAA+AGG - chr8_1:7480183-7480202 None:intergenic 20.0%
!! GGAAGATAATAAATATATAC+TGG + chr8_1:7480214-7480233 Msa1175880:intron 20.0%
!! TTATATATAGCAATGGAAAA+AGG + chr8_1:7480429-7480448 Msa1175880:CDS 20.0%
!! AGAAAGAAGAAGAATAAAAA+GGG - chr8_1:7481557-7481576 None:intergenic 20.0%
!! TAAATCAAAGGAATAAAGAA+AGG - chr8_1:7480183-7480202 None:intergenic 20.0%
!! GGAAGATAATAAATATATAC+TGG + chr8_1:7480214-7480233 Msa1175880:intron 20.0%
!! TTATATATAGCAATGGAAAA+AGG + chr8_1:7480429-7480448 Msa1175880:CDS 20.0%
!! AGAAAGAAGAAGAATAAAAA+GGG - chr8_1:7481557-7481576 None:intergenic 20.0%
! AGACTATATATATGTGTTGT+GGG - chr8_1:7479720-7479739 None:intergenic 25.0%
! AAGACTATATATATGTGTTG+TGG - chr8_1:7479721-7479740 None:intergenic 25.0%
! CACTTGAAGAAATAAATCAA+AGG - chr8_1:7480195-7480214 None:intergenic 25.0%
!! CTTTGATTTATTTCTTCAAG+TGG + chr8_1:7480193-7480212 Msa1175880:intron 25.0%
!!! GTATCGTGTTTTTTATTTTG+TGG + chr8_1:7480243-7480262 Msa1175880:intron 25.0%
! TTTGTAGAGAAATGCAAAAT+AGG + chr8_1:7480287-7480306 Msa1175880:intron 25.0%
! GACAAAGTTATATATAGCAA+TGG + chr8_1:7480422-7480441 Msa1175880:CDS 25.0%
! ATTAGATACAAATATACGTC+TGG + chr8_1:7480575-7480594 Msa1175880:intron 25.0%
!! CTTTATTGCGACAAAATTTT+AGG + chr8_1:7480678-7480697 Msa1175880:intron 25.0%
! ATGGTGGTTATAATAATGAA+AGG + chr8_1:7480965-7480984 Msa1175880:CDS 25.0%
! TATCTACTTGAATAATTGCA+TGG - chr8_1:7481065-7481084 None:intergenic 25.0%
! TGCAATTATTCAAGTAGATA+CGG + chr8_1:7481065-7481084 Msa1175880:CDS 25.0%
!!! AGTTGATGATGATGATTTAA+GGG - chr8_1:7481331-7481350 None:intergenic 25.0%
!!! AAGTTGATGATGATGATTTA+AGG - chr8_1:7481332-7481351 None:intergenic 25.0%
! GAAAGAAGAAGAATAAAAAG+GGG - chr8_1:7481556-7481575 None:intergenic 25.0%
! GAGAAAGAAGAAGAATAAAA+AGG - chr8_1:7481558-7481577 None:intergenic 25.0%
! AGACTATATATATGTGTTGT+GGG - chr8_1:7479720-7479739 None:intergenic 25.0%
! AAGACTATATATATGTGTTG+TGG - chr8_1:7479721-7479740 None:intergenic 25.0%
! CACTTGAAGAAATAAATCAA+AGG - chr8_1:7480195-7480214 None:intergenic 25.0%
!! CTTTGATTTATTTCTTCAAG+TGG + chr8_1:7480193-7480212 Msa1175880:intron 25.0%
!!! GTATCGTGTTTTTTATTTTG+TGG + chr8_1:7480243-7480262 Msa1175880:intron 25.0%
! TTTGTAGAGAAATGCAAAAT+AGG + chr8_1:7480287-7480306 Msa1175880:intron 25.0%
! GACAAAGTTATATATAGCAA+TGG + chr8_1:7480422-7480441 Msa1175880:CDS 25.0%
! ATTAGATACAAATATACGTC+TGG + chr8_1:7480575-7480594 Msa1175880:intron 25.0%
!! CTTTATTGCGACAAAATTTT+AGG + chr8_1:7480678-7480697 Msa1175880:intron 25.0%
! ATGGTGGTTATAATAATGAA+AGG + chr8_1:7480965-7480984 Msa1175880:CDS 25.0%
! TATCTACTTGAATAATTGCA+TGG - chr8_1:7481065-7481084 None:intergenic 25.0%
! TGCAATTATTCAAGTAGATA+CGG + chr8_1:7481065-7481084 Msa1175880:CDS 25.0%
!!! AGTTGATGATGATGATTTAA+GGG - chr8_1:7481331-7481350 None:intergenic 25.0%
!!! AAGTTGATGATGATGATTTA+AGG - chr8_1:7481332-7481351 None:intergenic 25.0%
! GAAAGAAGAAGAATAAAAAG+GGG - chr8_1:7481556-7481575 None:intergenic 25.0%
! GAGAAAGAAGAAGAATAAAA+AGG - chr8_1:7481558-7481577 None:intergenic 25.0%
! AATGTGTTCTCTCAACTTTT+TGG + chr8_1:7479819-7479838 Msa1175880:five_prime_UTR 30.0%
! ATGTGTTCTCTCAACTTTTT+GGG + chr8_1:7479820-7479839 Msa1175880:five_prime_UTR 30.0%
AACATGAGCATATCTGTTAA+TGG + chr8_1:7479928-7479947 Msa1175880:CDS 30.0%
AGCTTCTTCAATATTACTTG+AGG + chr8_1:7479998-7480017 Msa1175880:CDS 30.0%
!!! AAGAAGTACCAATCATTTTG+TGG - chr8_1:7480320-7480339 None:intergenic 30.0%
ATATATAACTTTGTCACGAC+CGG - chr8_1:7480417-7480436 None:intergenic 30.0%
TATAGCAATGGAAAAAGGAT+TGG + chr8_1:7480434-7480453 Msa1175880:CDS 30.0%
!!! AAGACTCTTGTTTTCTACAA+AGG + chr8_1:7480464-7480483 Msa1175880:CDS 30.0%
GTATCTAATACTTACCAGAT+TGG - chr8_1:7480564-7480583 None:intergenic 30.0%
!!! TTTTAGGTGTCGAATATGAT+TGG + chr8_1:7480694-7480713 Msa1175880:intron 30.0%
TTGTATGATACTTGTGATGA+AGG + chr8_1:7480823-7480842 Msa1175880:CDS 30.0%
GAGCAAATACTTCAACAAAT+GGG + chr8_1:7480853-7480872 Msa1175880:CDS 30.0%
AAATACTTCAACAAATGGGA+AGG + chr8_1:7480857-7480876 Msa1175880:CDS 30.0%
AATACTTCAACAAATGGGAA+GGG + chr8_1:7480858-7480877 Msa1175880:CDS 30.0%
ATAATTATGGAAGGTTTGCA+AGG + chr8_1:7480917-7480936 Msa1175880:CDS 30.0%
TTGTTGAGAGTAGATTCAAA+AGG - chr8_1:7480943-7480962 None:intergenic 30.0%
AACAATGAGAACAACAATGA+TGG + chr8_1:7481036-7481055 Msa1175880:CDS 30.0%
ACAATGAGAACAACAATGAT+GGG + chr8_1:7481037-7481056 Msa1175880:CDS 30.0%
ATACGGCTAATGAAAATGAA+GGG + chr8_1:7481082-7481101 Msa1175880:CDS 30.0%
CATGGTTAATAATCCATTAG+AGG + chr8_1:7481128-7481147 Msa1175880:CDS 30.0%
TCTATTTCACAATCGAACAA+GGG - chr8_1:7481583-7481602 None:intergenic 30.0%
ATCTATTTCACAATCGAACA+AGG - chr8_1:7481584-7481603 None:intergenic 30.0%
! TTTTCTTCCTCAAGTCAATA+AGG + chr8_1:7481652-7481671 Msa1175880:three_prime_UTR 30.0%
TTTCTTCCTCAAGTCAATAA+GGG + chr8_1:7481653-7481672 Msa1175880:three_prime_UTR 30.0%
!! TATAATCCCTTATTGACTTG+AGG - chr8_1:7481662-7481681 None:intergenic 30.0%
! GTACCTCAATATTATGCTTT+TGG + chr8_1:7481789-7481808 Msa1175880:three_prime_UTR 30.0%
! TTGCCAAAAGCATAATATTG+AGG - chr8_1:7481795-7481814 None:intergenic 30.0%
! AATGTGTTCTCTCAACTTTT+TGG + chr8_1:7479819-7479838 Msa1175880:five_prime_UTR 30.0%
! ATGTGTTCTCTCAACTTTTT+GGG + chr8_1:7479820-7479839 Msa1175880:five_prime_UTR 30.0%
AACATGAGCATATCTGTTAA+TGG + chr8_1:7479928-7479947 Msa1175880:CDS 30.0%
AGCTTCTTCAATATTACTTG+AGG + chr8_1:7479998-7480017 Msa1175880:CDS 30.0%
!!! AAGAAGTACCAATCATTTTG+TGG - chr8_1:7480320-7480339 None:intergenic 30.0%
ATATATAACTTTGTCACGAC+CGG - chr8_1:7480417-7480436 None:intergenic 30.0%
TATAGCAATGGAAAAAGGAT+TGG + chr8_1:7480434-7480453 Msa1175880:CDS 30.0%
!!! AAGACTCTTGTTTTCTACAA+AGG + chr8_1:7480464-7480483 Msa1175880:CDS 30.0%
GTATCTAATACTTACCAGAT+TGG - chr8_1:7480564-7480583 None:intergenic 30.0%
!!! TTTTAGGTGTCGAATATGAT+TGG + chr8_1:7480694-7480713 Msa1175880:intron 30.0%
TTGTATGATACTTGTGATGA+AGG + chr8_1:7480823-7480842 Msa1175880:CDS 30.0%
GAGCAAATACTTCAACAAAT+GGG + chr8_1:7480853-7480872 Msa1175880:CDS 30.0%
AAATACTTCAACAAATGGGA+AGG + chr8_1:7480857-7480876 Msa1175880:CDS 30.0%
AATACTTCAACAAATGGGAA+GGG + chr8_1:7480858-7480877 Msa1175880:CDS 30.0%
ATAATTATGGAAGGTTTGCA+AGG + chr8_1:7480917-7480936 Msa1175880:CDS 30.0%
TTGTTGAGAGTAGATTCAAA+AGG - chr8_1:7480943-7480962 None:intergenic 30.0%
AACAATGAGAACAACAATGA+TGG + chr8_1:7481036-7481055 Msa1175880:CDS 30.0%
ACAATGAGAACAACAATGAT+GGG + chr8_1:7481037-7481056 Msa1175880:CDS 30.0%
ATACGGCTAATGAAAATGAA+GGG + chr8_1:7481082-7481101 Msa1175880:CDS 30.0%
CATGGTTAATAATCCATTAG+AGG + chr8_1:7481128-7481147 Msa1175880:CDS 30.0%
TCTATTTCACAATCGAACAA+GGG - chr8_1:7481583-7481602 None:intergenic 30.0%
ATCTATTTCACAATCGAACA+AGG - chr8_1:7481584-7481603 None:intergenic 30.0%
! TTTTCTTCCTCAAGTCAATA+AGG + chr8_1:7481652-7481671 Msa1175880:three_prime_UTR 30.0%
TTTCTTCCTCAAGTCAATAA+GGG + chr8_1:7481653-7481672 Msa1175880:three_prime_UTR 30.0%
!! TATAATCCCTTATTGACTTG+AGG - chr8_1:7481662-7481681 None:intergenic 30.0%
! GTACCTCAATATTATGCTTT+TGG + chr8_1:7481789-7481808 Msa1175880:three_prime_UTR 30.0%
! TTGCCAAAAGCATAATATTG+AGG - chr8_1:7481795-7481814 None:intergenic 30.0%
GTACTGGAATGAGTATGTAA+AGG - chr8_1:7479744-7479763 None:intergenic 35.0%
AAAGGTGAAAGATAATGAGG+TGG - chr8_1:7479772-7479791 None:intergenic 35.0%
AGGAAAGGTGAAAGATAATG+AGG - chr8_1:7479775-7479794 None:intergenic 35.0%
TAGGAAAGAAAGGAAAGGAA+AGG - chr8_1:7479790-7479809 None:intergenic 35.0%
TCAAAACAGGTAGGAAAGAA+AGG - chr8_1:7479800-7479819 None:intergenic 35.0%
AGAACACATTCAAAACAGGT+AGG - chr8_1:7479809-7479828 None:intergenic 35.0%
TGAGAGAACACATTCAAAAC+AGG - chr8_1:7479813-7479832 None:intergenic 35.0%
!! TAGTGGTTCTAGATTCACAA+GGG - chr8_1:7479847-7479866 None:intergenic 35.0%
GTAGCAAAAGAAGATAAGCT+AGG - chr8_1:7479878-7479897 None:intergenic 35.0%
TTAAGGTAACTAAGAGAGAG+TGG - chr8_1:7479900-7479919 None:intergenic 35.0%
ACAGATATGCTCATGTTATC+AGG - chr8_1:7479925-7479944 None:intergenic 35.0%
CAACATCACGAATAACATCA+AGG - chr8_1:7480050-7480069 None:intergenic 35.0%
ATATTACCTTGAATGTCCCA+TGG - chr8_1:7480090-7480109 None:intergenic 35.0%
TGCATTTCTCTACAAAGAAG+AGG - chr8_1:7480283-7480302 None:intergenic 35.0%
GAACAACTCCACAAAATGAT+TGG + chr8_1:7480309-7480328 Msa1175880:CDS 35.0%
TTGGATACTTCTTGTCTTTG+TGG - chr8_1:7480346-7480365 None:intergenic 35.0%
!! AAAGACAAGAAGTATCCAAC+TGG + chr8_1:7480347-7480366 Msa1175880:CDS 35.0%
! GCATGATCCAATCAGATTTT+TGG - chr8_1:7480505-7480524 None:intergenic 35.0%
CACAAGTATCATACAAGTGA+TGG - chr8_1:7480819-7480838 None:intergenic 35.0%
GGAGCAAATACTTCAACAAA+TGG + chr8_1:7480852-7480871 Msa1175880:CDS 35.0%
ATACTTCAACAAATGGGAAG+GGG + chr8_1:7480859-7480878 Msa1175880:CDS 35.0%
GAATCTACTCTCAACAACAA+TGG + chr8_1:7480946-7480965 Msa1175880:CDS 35.0%
! GATTTTGGACTCTCTAAGTT+TGG - chr8_1:7481003-7481022 None:intergenic 35.0%
!!! TTCTCCATGCTTGTTGATTT+TGG - chr8_1:7481018-7481037 None:intergenic 35.0%
GATACGGCTAATGAAAATGA+AGG + chr8_1:7481081-7481100 Msa1175880:CDS 35.0%
CTCTGATCATCATCATAACA+TGG + chr8_1:7481110-7481129 Msa1175880:CDS 35.0%
!! TGATGGTGGTCTTACTAATT+GGG + chr8_1:7481182-7481201 Msa1175880:CDS 35.0%
TCTTACTAATTGGGTAGCTT+TGG + chr8_1:7481191-7481210 Msa1175880:CDS 35.0%
! CTTGTTGCTTCTCAATTGAA+TGG + chr8_1:7481219-7481238 Msa1175880:CDS 35.0%
TCAATTGAATGGACAAACTG+AGG + chr8_1:7481230-7481249 Msa1175880:CDS 35.0%
TTAGTGCAATATCCCATTGT+GGG - chr8_1:7481285-7481304 None:intergenic 35.0%
ATTAGTGCAATATCCCATTG+TGG - chr8_1:7481286-7481305 None:intergenic 35.0%
! GATGATGATGATTTAAGGGT+GGG - chr8_1:7481327-7481346 None:intergenic 35.0%
! TGATGATGATGATTTAAGGG+TGG - chr8_1:7481328-7481347 None:intergenic 35.0%
GTACTGGAATGAGTATGTAA+AGG - chr8_1:7479744-7479763 None:intergenic 35.0%
AAAGGTGAAAGATAATGAGG+TGG - chr8_1:7479772-7479791 None:intergenic 35.0%
AGGAAAGGTGAAAGATAATG+AGG - chr8_1:7479775-7479794 None:intergenic 35.0%
TAGGAAAGAAAGGAAAGGAA+AGG - chr8_1:7479790-7479809 None:intergenic 35.0%
TCAAAACAGGTAGGAAAGAA+AGG - chr8_1:7479800-7479819 None:intergenic 35.0%
AGAACACATTCAAAACAGGT+AGG - chr8_1:7479809-7479828 None:intergenic 35.0%
TGAGAGAACACATTCAAAAC+AGG - chr8_1:7479813-7479832 None:intergenic 35.0%
!! TAGTGGTTCTAGATTCACAA+GGG - chr8_1:7479847-7479866 None:intergenic 35.0%
GTAGCAAAAGAAGATAAGCT+AGG - chr8_1:7479878-7479897 None:intergenic 35.0%
TTAAGGTAACTAAGAGAGAG+TGG - chr8_1:7479900-7479919 None:intergenic 35.0%
ACAGATATGCTCATGTTATC+AGG - chr8_1:7479925-7479944 None:intergenic 35.0%
CAACATCACGAATAACATCA+AGG - chr8_1:7480050-7480069 None:intergenic 35.0%
ATATTACCTTGAATGTCCCA+TGG - chr8_1:7480090-7480109 None:intergenic 35.0%
TGCATTTCTCTACAAAGAAG+AGG - chr8_1:7480283-7480302 None:intergenic 35.0%
GAACAACTCCACAAAATGAT+TGG + chr8_1:7480309-7480328 Msa1175880:CDS 35.0%
TTGGATACTTCTTGTCTTTG+TGG - chr8_1:7480346-7480365 None:intergenic 35.0%
!! AAAGACAAGAAGTATCCAAC+TGG + chr8_1:7480347-7480366 Msa1175880:CDS 35.0%
! GCATGATCCAATCAGATTTT+TGG - chr8_1:7480505-7480524 None:intergenic 35.0%
CACAAGTATCATACAAGTGA+TGG - chr8_1:7480819-7480838 None:intergenic 35.0%
GGAGCAAATACTTCAACAAA+TGG + chr8_1:7480852-7480871 Msa1175880:CDS 35.0%
ATACTTCAACAAATGGGAAG+GGG + chr8_1:7480859-7480878 Msa1175880:CDS 35.0%
GAATCTACTCTCAACAACAA+TGG + chr8_1:7480946-7480965 Msa1175880:CDS 35.0%
! GATTTTGGACTCTCTAAGTT+TGG - chr8_1:7481003-7481022 None:intergenic 35.0%
!!! TTCTCCATGCTTGTTGATTT+TGG - chr8_1:7481018-7481037 None:intergenic 35.0%
GATACGGCTAATGAAAATGA+AGG + chr8_1:7481081-7481100 Msa1175880:CDS 35.0%
CTCTGATCATCATCATAACA+TGG + chr8_1:7481110-7481129 Msa1175880:CDS 35.0%
!! TGATGGTGGTCTTACTAATT+GGG + chr8_1:7481182-7481201 Msa1175880:CDS 35.0%
TCTTACTAATTGGGTAGCTT+TGG + chr8_1:7481191-7481210 Msa1175880:CDS 35.0%
! CTTGTTGCTTCTCAATTGAA+TGG + chr8_1:7481219-7481238 Msa1175880:CDS 35.0%
TCAATTGAATGGACAAACTG+AGG + chr8_1:7481230-7481249 Msa1175880:CDS 35.0%
TTAGTGCAATATCCCATTGT+GGG - chr8_1:7481285-7481304 None:intergenic 35.0%
ATTAGTGCAATATCCCATTG+TGG - chr8_1:7481286-7481305 None:intergenic 35.0%
! GATGATGATGATTTAAGGGT+GGG - chr8_1:7481327-7481346 None:intergenic 35.0%
! TGATGATGATGATTTAAGGG+TGG - chr8_1:7481328-7481347 None:intergenic 35.0%
ATATGTGTTGTGGGACAGAA+AGG - chr8_1:7479711-7479730 None:intergenic 40.0%
ACAGGTAGGAAAGAAAGGAA+AGG - chr8_1:7479795-7479814 None:intergenic 40.0%
!! GTAGTGGTTCTAGATTCACA+AGG - chr8_1:7479848-7479867 None:intergenic 40.0%
TAAGCTAGGTAGCTATGTAG+TGG - chr8_1:7479864-7479883 None:intergenic 40.0%
GCTCATGTTATCAGGCATTA+AGG - chr8_1:7479917-7479936 None:intergenic 40.0%
CTTCTTCAGTTGGATGAAAC+CGG - chr8_1:7479978-7479997 None:intergenic 40.0%
TGAAGAAGCTCTTCTTCAGT+TGG - chr8_1:7479988-7480007 None:intergenic 40.0%
ATCTCAACAAGCTTGAACCA+TGG + chr8_1:7480070-7480089 Msa1175880:CDS 40.0%
TCTCAACAAGCTTGAACCAT+GGG + chr8_1:7480071-7480090 Msa1175880:CDS 40.0%
!!! CAATCAGATTTTTGGCCATG+AGG - chr8_1:7480497-7480516 None:intergenic 40.0%
CTCATGGCCAAAAATCTGAT+TGG + chr8_1:7480495-7480514 Msa1175880:CDS 40.0%
!! ACTTACCAGATTGGTGTCAT+TGG - chr8_1:7480555-7480574 None:intergenic 40.0%
GTGTCGAATATGATTGGTGA+TGG + chr8_1:7480700-7480719 Msa1175880:CDS 40.0%
!! TCGAATATGATTGGTGATGG+TGG + chr8_1:7480703-7480722 Msa1175880:CDS 40.0%
TACTTGTGATGAAGGAGCTT+TGG + chr8_1:7480831-7480850 Msa1175880:CDS 40.0%
TCTACTCTCAACAACAATGG+TGG + chr8_1:7480949-7480968 Msa1175880:CDS 40.0%
GAGTCCAAAATCAACAAGCA+TGG + chr8_1:7481011-7481030 Msa1175880:CDS 40.0%
! GATGATGATGATGCCTCTAA+TGG - chr8_1:7481144-7481163 None:intergenic 40.0%
!! AGAGGCATCATCATCATCAA+TGG + chr8_1:7481146-7481165 Msa1175880:CDS 40.0%
TCATCAATGGTGATAGCATG+TGG + chr8_1:7481159-7481178 Msa1175880:CDS 40.0%
!! GTGATGGTGGTCTTACTAAT+TGG + chr8_1:7481181-7481200 Msa1175880:CDS 40.0%
!! CTAATTGGGTAGCTTTGGAT+AGG + chr8_1:7481196-7481215 Msa1175880:CDS 40.0%
TTGCTTTAATGACCCCACAA+TGG + chr8_1:7481269-7481288 Msa1175880:CDS 40.0%
TGCTTTAATGACCCCACAAT+GGG + chr8_1:7481270-7481289 Msa1175880:CDS 40.0%
TAGTGCAATATCCCATTGTG+GGG - chr8_1:7481284-7481303 None:intergenic 40.0%
TTCAGAAGATGACAACAACG+AGG - chr8_1:7481478-7481497 None:intergenic 40.0%
ATATGTGTTGTGGGACAGAA+AGG - chr8_1:7479711-7479730 None:intergenic 40.0%
ACAGGTAGGAAAGAAAGGAA+AGG - chr8_1:7479795-7479814 None:intergenic 40.0%
!! GTAGTGGTTCTAGATTCACA+AGG - chr8_1:7479848-7479867 None:intergenic 40.0%
TAAGCTAGGTAGCTATGTAG+TGG - chr8_1:7479864-7479883 None:intergenic 40.0%
GCTCATGTTATCAGGCATTA+AGG - chr8_1:7479917-7479936 None:intergenic 40.0%
CTTCTTCAGTTGGATGAAAC+CGG - chr8_1:7479978-7479997 None:intergenic 40.0%
TGAAGAAGCTCTTCTTCAGT+TGG - chr8_1:7479988-7480007 None:intergenic 40.0%
ATCTCAACAAGCTTGAACCA+TGG + chr8_1:7480070-7480089 Msa1175880:CDS 40.0%
TCTCAACAAGCTTGAACCAT+GGG + chr8_1:7480071-7480090 Msa1175880:CDS 40.0%
!!! CAATCAGATTTTTGGCCATG+AGG - chr8_1:7480497-7480516 None:intergenic 40.0%
CTCATGGCCAAAAATCTGAT+TGG + chr8_1:7480495-7480514 Msa1175880:CDS 40.0%
!! ACTTACCAGATTGGTGTCAT+TGG - chr8_1:7480555-7480574 None:intergenic 40.0%
GTGTCGAATATGATTGGTGA+TGG + chr8_1:7480700-7480719 Msa1175880:CDS 40.0%
!! TCGAATATGATTGGTGATGG+TGG + chr8_1:7480703-7480722 Msa1175880:CDS 40.0%
TACTTGTGATGAAGGAGCTT+TGG + chr8_1:7480831-7480850 Msa1175880:CDS 40.0%
TCTACTCTCAACAACAATGG+TGG + chr8_1:7480949-7480968 Msa1175880:CDS 40.0%
GAGTCCAAAATCAACAAGCA+TGG + chr8_1:7481011-7481030 Msa1175880:CDS 40.0%
! GATGATGATGATGCCTCTAA+TGG - chr8_1:7481144-7481163 None:intergenic 40.0%
!! AGAGGCATCATCATCATCAA+TGG + chr8_1:7481146-7481165 Msa1175880:CDS 40.0%
TCATCAATGGTGATAGCATG+TGG + chr8_1:7481159-7481178 Msa1175880:CDS 40.0%
!! GTGATGGTGGTCTTACTAAT+TGG + chr8_1:7481181-7481200 Msa1175880:CDS 40.0%
!! CTAATTGGGTAGCTTTGGAT+AGG + chr8_1:7481196-7481215 Msa1175880:CDS 40.0%
TTGCTTTAATGACCCCACAA+TGG + chr8_1:7481269-7481288 Msa1175880:CDS 40.0%
TGCTTTAATGACCCCACAAT+GGG + chr8_1:7481270-7481289 Msa1175880:CDS 40.0%
TAGTGCAATATCCCATTGTG+GGG - chr8_1:7481284-7481303 None:intergenic 40.0%
TTCAGAAGATGACAACAACG+AGG - chr8_1:7481478-7481497 None:intergenic 40.0%
TAATGAGGTGGTGTGTGTAC+TGG - chr8_1:7479760-7479779 None:intergenic 45.0%
CTTGAACCATGGGACATTCA+AGG + chr8_1:7480081-7480100 Msa1175880:CDS 45.0%
TATAACTTTGTCACGACCGG+TGG - chr8_1:7480414-7480433 None:intergenic 45.0%
!! TACCAGATTGGTGTCATTGG+TGG - chr8_1:7480552-7480571 None:intergenic 45.0%
ATGGTGGTCAAGAAGAAGGA+TGG + chr8_1:7480719-7480738 Msa1175880:CDS 45.0%
TGGTGGTCAAGAAGAAGGAT+GGG + chr8_1:7480720-7480739 Msa1175880:CDS 45.0%
TTCTTCTTCCCTCTCCAGAA+GGG - chr8_1:7480795-7480814 None:intergenic 45.0%
ATGGTGATAGCATGTGGTGA+TGG + chr8_1:7481165-7481184 Msa1175880:CDS 45.0%
ATGGACAAACTGAGGCTTCT+AGG + chr8_1:7481238-7481257 Msa1175880:CDS 45.0%
AACTGAGGCTTCTAGGCAAT+TGG + chr8_1:7481245-7481264 Msa1175880:CDS 45.0%
TCACTGGCATAGTCATGTGA+GGG - chr8_1:7481423-7481442 None:intergenic 45.0%
TTGATCGAGCAAAGTTCCAG+AGG - chr8_1:7481452-7481471 None:intergenic 45.0%
TAATGAGGTGGTGTGTGTAC+TGG - chr8_1:7479760-7479779 None:intergenic 45.0%
CTTGAACCATGGGACATTCA+AGG + chr8_1:7480081-7480100 Msa1175880:CDS 45.0%
TATAACTTTGTCACGACCGG+TGG - chr8_1:7480414-7480433 None:intergenic 45.0%
!! TACCAGATTGGTGTCATTGG+TGG - chr8_1:7480552-7480571 None:intergenic 45.0%
ATGGTGGTCAAGAAGAAGGA+TGG + chr8_1:7480719-7480738 Msa1175880:CDS 45.0%
TGGTGGTCAAGAAGAAGGAT+GGG + chr8_1:7480720-7480739 Msa1175880:CDS 45.0%
TTCTTCTTCCCTCTCCAGAA+GGG - chr8_1:7480795-7480814 None:intergenic 45.0%
ATGGTGATAGCATGTGGTGA+TGG + chr8_1:7481165-7481184 Msa1175880:CDS 45.0%
ATGGACAAACTGAGGCTTCT+AGG + chr8_1:7481238-7481257 Msa1175880:CDS 45.0%
AACTGAGGCTTCTAGGCAAT+TGG + chr8_1:7481245-7481264 Msa1175880:CDS 45.0%
TCACTGGCATAGTCATGTGA+GGG - chr8_1:7481423-7481442 None:intergenic 45.0%
TTGATCGAGCAAAGTTCCAG+AGG - chr8_1:7481452-7481471 None:intergenic 45.0%
GGACAATCTCAAGTTCCTCC+TGG + chr8_1:7479949-7479968 Msa1175880:CDS 50.0%
CTCAAGTTCCTCCTGGATTC+CGG + chr8_1:7479956-7479975 Msa1175880:CDS 50.0%
GTTGGATGAAACCGGAATCC+AGG - chr8_1:7479970-7479989 None:intergenic 50.0%
!! CGATTGGTTCGTGTTCCAGT+TGG - chr8_1:7480365-7480384 None:intergenic 50.0%
TACAAAGGTCGTGCTCCTCA+TGG + chr8_1:7480479-7480498 Msa1175880:CDS 50.0%
CACCACCAATGACACCAATC+TGG + chr8_1:7480547-7480566 Msa1175880:CDS 50.0%
!! GGTGATGGTGGTCAAGAAGA+AGG + chr8_1:7480715-7480734 Msa1175880:CDS 50.0%
TGGTCAAGAAGAAGGATGGG+TGG + chr8_1:7480723-7480742 Msa1175880:CDS 50.0%
AAGAAGGATGGGTGGTGTGT+AGG + chr8_1:7480731-7480750 Msa1175880:CDS 50.0%
AAAACCCTAGACAGCCCTTC+TGG + chr8_1:7480778-7480797 Msa1175880:CDS 50.0%
CTTCTTCTTCCCTCTCCAGA+AGG - chr8_1:7480796-7480815 None:intergenic 50.0%
ACAAATGGGAAGGGGTTGCA+AGG + chr8_1:7480867-7480886 Msa1175880:CDS 50.0%
!! GTGATAGCATGTGGTGATGG+TGG + chr8_1:7481168-7481187 Msa1175880:CDS 50.0%
CTCACTGGCATAGTCATGTG+AGG - chr8_1:7481424-7481443 None:intergenic 50.0%
ATGCCAGTGAGATTGACCTC+TGG + chr8_1:7481433-7481452 Msa1175880:CDS 50.0%
GTTCCAGAGGTCAATCTCAC+TGG - chr8_1:7481439-7481458 None:intergenic 50.0%
GTATTCGACACGTGACACAG+TGG - chr8_1:7481501-7481520 None:intergenic 50.0%
GGACAATCTCAAGTTCCTCC+TGG + chr8_1:7479949-7479968 Msa1175880:CDS 50.0%
CTCAAGTTCCTCCTGGATTC+CGG + chr8_1:7479956-7479975 Msa1175880:CDS 50.0%
GTTGGATGAAACCGGAATCC+AGG - chr8_1:7479970-7479989 None:intergenic 50.0%
!! CGATTGGTTCGTGTTCCAGT+TGG - chr8_1:7480365-7480384 None:intergenic 50.0%
TACAAAGGTCGTGCTCCTCA+TGG + chr8_1:7480479-7480498 Msa1175880:CDS 50.0%
CACCACCAATGACACCAATC+TGG + chr8_1:7480547-7480566 Msa1175880:CDS 50.0%
!! GGTGATGGTGGTCAAGAAGA+AGG + chr8_1:7480715-7480734 Msa1175880:CDS 50.0%
TGGTCAAGAAGAAGGATGGG+TGG + chr8_1:7480723-7480742 Msa1175880:CDS 50.0%
AAGAAGGATGGGTGGTGTGT+AGG + chr8_1:7480731-7480750 Msa1175880:CDS 50.0%
AAAACCCTAGACAGCCCTTC+TGG + chr8_1:7480778-7480797 Msa1175880:CDS 50.0%
CTTCTTCTTCCCTCTCCAGA+AGG - chr8_1:7480796-7480815 None:intergenic 50.0%
ACAAATGGGAAGGGGTTGCA+AGG + chr8_1:7480867-7480886 Msa1175880:CDS 50.0%
!! GTGATAGCATGTGGTGATGG+TGG + chr8_1:7481168-7481187 Msa1175880:CDS 50.0%
CTCACTGGCATAGTCATGTG+AGG - chr8_1:7481424-7481443 None:intergenic 50.0%
ATGCCAGTGAGATTGACCTC+TGG + chr8_1:7481433-7481452 Msa1175880:CDS 50.0%
GTTCCAGAGGTCAATCTCAC+TGG - chr8_1:7481439-7481458 None:intergenic 50.0%
GTATTCGACACGTGACACAG+TGG - chr8_1:7481501-7481520 None:intergenic 50.0%
GGATGAAACCGGAATCCAGG+AGG - chr8_1:7479967-7479986 None:intergenic 55.0%
CTCTCCAGAAGGGCTGTCTA+GGG - chr8_1:7480785-7480804 None:intergenic 55.0%
! CTAGACAGCCCTTCTGGAGA+GGG + chr8_1:7480784-7480803 Msa1175880:CDS 55.0%
GGATGAAACCGGAATCCAGG+AGG - chr8_1:7479967-7479986 None:intergenic 55.0%
CTCTCCAGAAGGGCTGTCTA+GGG - chr8_1:7480785-7480804 None:intergenic 55.0%
! CTAGACAGCCCTTCTGGAGA+GGG + chr8_1:7480784-7480803 Msa1175880:CDS 55.0%
GGTGGCTTTCCAGAACCCTG+CGG - chr8_1:7480396-7480415 None:intergenic 60.0%
!! GCAGGGTTCTGGAAAGCCAC+CGG + chr8_1:7480395-7480414 Msa1175880:CDS 60.0%
CCTCTCCAGAAGGGCTGTCT+AGG - chr8_1:7480786-7480805 None:intergenic 60.0%
! CCTAGACAGCCCTTCTGGAG+AGG + chr8_1:7480783-7480802 Msa1175880:CDS 60.0%
GGTGGCTTTCCAGAACCCTG+CGG - chr8_1:7480396-7480415 None:intergenic 60.0%
!! GCAGGGTTCTGGAAAGCCAC+CGG + chr8_1:7480395-7480414 Msa1175880:CDS 60.0%
CCTCTCCAGAAGGGCTGTCT+AGG - chr8_1:7480786-7480805 None:intergenic 60.0%
! CCTAGACAGCCCTTCTGGAG+AGG + chr8_1:7480783-7480802 Msa1175880:CDS 60.0%
ACCAATCGCGCTACAGCCGC+AGG + chr8_1:7480377-7480396 Msa1175880:CDS 65.0%
CCAATCGCGCTACAGCCGCA+GGG + chr8_1:7480378-7480397 Msa1175880:CDS 65.0%
ACCAATCGCGCTACAGCCGC+AGG + chr8_1:7480377-7480396 Msa1175880:CDS 65.0%
CCAATCGCGCTACAGCCGCA+GGG + chr8_1:7480378-7480397 Msa1175880:CDS 65.0%
CCCTGCGGCTGTAGCGCGAT+TGG - chr8_1:7480381-7480400 None:intergenic 70.0%
GCGCTACAGCCGCAGGGTTC+TGG + chr8_1:7480384-7480403 Msa1175880:CDS 70.0%
CCCTGCGGCTGTAGCGCGAT+TGG - chr8_1:7480381-7480400 None:intergenic 70.0%
GCGCTACAGCCGCAGGGTTC+TGG + chr8_1:7480384-7480403 Msa1175880:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 7479707 7481835 7479707 ID=Msa1175880;Name=Msa1175880
chr8_1 mRNA 7479707 7481835 7479707 ID=Msa1175880-mRNA-1;Parent=Msa1175880;Name=Msa1175880-mRNA-1;_AED=0.05;_eAED=0.05;_QI=212|1|1|1|1|1|3|305|429
chr8_1 exon 7479707 7480102 7479707 ID=Msa1175880-mRNA-1:exon:2664;Parent=Msa1175880-mRNA-1
chr8_1 exon 7480294 7480568 7480294 ID=Msa1175880-mRNA-1:exon:2665;Parent=Msa1175880-mRNA-1
chr8_1 exon 7480700 7481835 7480700 ID=Msa1175880-mRNA-1:exon:2666;Parent=Msa1175880-mRNA-1
chr8_1 five_prime_UTR 7479707 7479918 7479707 ID=Msa1175880-mRNA-1:five_prime_utr;Parent=Msa1175880-mRNA-1
chr8_1 CDS 7479919 7480102 7479919 ID=Msa1175880-mRNA-1:cds;Parent=Msa1175880-mRNA-1
chr8_1 CDS 7480294 7480568 7480294 ID=Msa1175880-mRNA-1:cds;Parent=Msa1175880-mRNA-1
chr8_1 CDS 7480700 7481530 7480700 ID=Msa1175880-mRNA-1:cds;Parent=Msa1175880-mRNA-1
chr8_1 three_prime_UTR 7481531 7481835 7481531 ID=Msa1175880-mRNA-1:three_prime_utr;Parent=Msa1175880-mRNA-1
Gene Sequence

>Msa1175880

ATGCCTGATAACATGAGCATATCTGTTAATGGACAATCTCAAGTTCCTCCTGGATTCCGGTTTCATCCAACTGAAGAAGAGCTTCTTCAATATTACTTGAGGAAAAAAGTCTCTTATGAGAAGATTGACCTTGATGTTATTCGTGATGTTGATCTCAACAAGCTTGAACCATGGGACATTCAAGAGAAATGCAAAATAGGAACAACTCCACAAAATGATTGGTACTTCTTCAGCCACAAAGACAAGAAGTATCCAACTGGAACACGAACCAATCGCGCTACAGCCGCAGGGTTCTGGAAAGCCACCGGTCGTGACAAAGTTATATATAGCAATGGAAAAAGGATTGGAATGAGAAAGACTCTTGTTTTCTACAAAGGTCGTGCTCCTCATGGCCAAAAATCTGATTGGATCATGCATGAGTATAGACTCGACGATAACACCACCAATGACACCAATCTGGTGTCGAATATGATTGGTGATGGTGGTCAAGAAGAAGGATGGGTGGTGTGTAGGATATTCAAGAAGAAGAATCATCTCAAAACCCTAGACAGCCCTTCTGGAGAGGGAAGAAGAAGCCATCACTTGTATGATACTTGTGATGAAGGAGCTTTGGAGCAAATACTTCAACAAATGGGAAGGGGTTGCAAGGAAGAGAATTATGAAGCAAATTACAATAATAATTATGGAAGGTTTGCAAGGCCTTTTGAATCTACTCTCAACAACAATGGTGGTTATAATAATGAAAGGTTCATGAAACTTCCAAACTTAGAGAGTCCAAAATCAACAAGCATGGAGAACAATGAGAACAACAATGATGGGTACCATGCAATTATTCAAGTAGATACGGCTAATGAAAATGAAGGGTCATTCTCTGATCATCATCATAACATGGTTAATAATCCATTAGAGGCATCATCATCATCAATGGTGATAGCATGTGGTGATGGTGGTCTTACTAATTGGGTAGCTTTGGATAGGCTTGTTGCTTCTCAATTGAATGGACAAACTGAGGCTTCTAGGCAATTGGCTTGCTTTAATGACCCCACAATGGGATATTGCACTAATGATCAAGATCTTCAACTTCCCACCCTTAAATCATCATCATCAACTTCATCACTATCAACACAAGTCAGAGCTACTACTACTTCTACTACTACTACAGCTACTACTTACATTAGTCCCTCACATGACTATGCCAGTGAGATTGACCTCTGGAACTTTGCTCGATCAACTTCCTCGTTGTTGTCATCTTCTGAACCACTGTGTCACGTGTCGAATACGTCAGTGTGA
Protein sequence

>Msa1175880

MPDNMSISVNGQSQVPPGFRFHPTEEELLQYYLRKKVSYEKIDLDVIRDVDLNKLEPWDIQEKCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYSNGKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNTTNDTNLVSNMIGDGGQEEGWVVCRIFKKKNHLKTLDSPSGEGRRSHHLYDTCDEGALEQILQQMGRGCKEENYEANYNNNYGRFARPFESTLNNNGGYNNERFMKLPNLESPKSTSMENNENNNDGYHAIIQVDTANENEGSFSDHHHNMVNNPLEASSSSMVIACGDGGLTNWVALDRLVASQLNGQTEASRQLACFNDPTMGYCTNDQDLQLPTLKSSSSTSSLSTQVRATTTSTTTTATTYISPSHDYASEIDLWNFARSTSSLLSSSEPLCHVSNTSV*