AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1277550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1277550 MtrunA17_Chr8g0346001 97.018 436 6 2 1 431 1 434 0.0 883
Msa1277550 MtrunA17_Chr2g0309331 75.000 168 30 2 11 177 6 162 4.58e-91 279
Msa1277550 MtrunA17_Chr4g0018391 47.093 344 139 9 9 341 1 312 5.49e-91 279
Msa1277550 MtrunA17_Chr4g0056541 47.605 334 132 8 9 333 1 300 5.42e-90 277
Msa1277550 MtrunA17_Chr4g0017921 73.494 166 32 1 15 180 8 161 1.04e-88 273
Msa1277550 MtrunA17_Chr5g0398971 43.700 373 135 10 9 361 1 318 4.62e-85 264
Msa1277550 MtrunA17_Chr5g0405211 50.980 255 93 3 12 259 5 234 6.28e-85 263
Msa1277550 MtrunA17_Chr8g0372121 50.781 256 109 5 12 267 3 241 5.95e-81 252
Msa1277550 MtrunA17_Chr1g0200561 43.068 339 137 9 6 330 10 306 1.71e-77 244
Msa1277550 MtrunA17_Chr3g0091921 53.714 175 69 4 3 175 2 166 3.86e-58 192
Msa1277550 MtrunA17_Chr4g0060931 48.969 194 76 5 3 193 2 175 1.44e-57 193
Msa1277550 MtrunA17_Chr6g0481091 47.126 174 82 2 15 188 6 169 6.54e-57 187
Msa1277550 MtrunA17_Chr2g0316971 52.096 167 68 4 13 177 21 177 6.36e-56 189
Msa1277550 MtrunA17_Chr5g0417791 44.175 206 105 3 14 219 2 197 1.74e-55 184
Msa1277550 MtrunA17_Chr6g0484441 52.174 161 63 2 15 175 5 151 2.12e-55 186
Msa1277550 MtrunA17_Chr4g0042561 43.810 210 102 5 10 215 4 201 2.58e-55 184
Msa1277550 MtrunA17_Chr2g0309891 49.102 167 76 3 15 181 6 163 3.75e-55 186
Msa1277550 MtrunA17_Chr6g0453451 50.588 170 74 3 14 183 19 178 2.52e-54 183
Msa1277550 MtrunA17_Chr7g0217721 50.549 182 77 3 10 183 14 190 5.54e-54 183
Msa1277550 MtrunA17_Chr3g0139331 49.711 173 71 3 5 175 1 159 8.30e-54 182
Msa1277550 MtrunA17_Chr3g0109821 49.693 163 69 3 15 175 6 157 2.72e-53 189
Msa1277550 MtrunA17_Chr7g0253011 49.444 180 77 4 15 190 17 186 4.30e-53 182
Msa1277550 MtrunA17_Chr1g0147421 48.108 185 77 5 12 192 24 193 4.74e-53 181
Msa1277550 MtrunA17_Chr2g0312321 48.824 170 74 4 12 181 8 164 8.26e-53 179
Msa1277550 MtrunA17_Chr5g0433781 49.693 163 68 3 15 175 6 156 3.53e-52 185
Msa1277550 MtrunA17_Chr7g0252971 47.977 173 73 4 12 175 5 169 4.35e-52 178
Msa1277550 MtrunA17_Chr2g0318101 40.889 225 114 7 12 228 12 225 4.82e-52 178
Msa1277550 MtrunA17_Chr2g0318081 47.879 165 74 2 11 175 12 164 1.23e-51 177
Msa1277550 MtrunA17_Chr6g0461661 49.091 165 72 4 15 177 18 172 8.79e-51 176
Msa1277550 MtrunA17_Chr8g0359921 48.780 164 74 3 12 175 11 164 1.07e-50 174
Msa1277550 MtrunA17_Chr6g0453131 38.667 225 122 6 1 219 1 215 2.21e-50 175
Msa1277550 MtrunA17_Chr3g0124761 45.304 181 89 3 14 194 6 176 2.72e-49 169
Msa1277550 MtrunA17_Chr8g0361731 46.988 166 77 4 17 177 16 175 6.37e-49 171
Msa1277550 MtrunA17_Chr5g0400461 45.789 190 77 6 11 191 2 174 7.94e-49 169
Msa1277550 MtrunA17_Chr3g0130731 40.196 204 112 4 9 212 1 194 1.71e-48 167
Msa1277550 MtrunA17_Chr7g0263931 46.951 164 77 3 14 175 10 165 3.28e-48 167
Msa1277550 MtrunA17_Chr2g0326361 47.059 170 80 3 15 182 14 175 4.18e-48 167
Msa1277550 MtrunA17_Chr7g0217711 54.861 144 62 1 10 153 14 154 5.52e-48 162
Msa1277550 MtrunA17_Chr3g0144271 55.319 141 57 3 15 152 23 160 9.61e-48 169
Msa1277550 MtrunA17_Chr2g0311651 45.402 174 86 4 9 175 15 186 1.71e-47 165
Msa1277550 MtrunA17_Chr4g0047841 42.553 188 89 5 6 177 6 190 1.77e-47 166
Msa1277550 MtrunA17_Chr4g0054791 45.055 182 83 4 13 189 4 173 3.62e-47 164
Msa1277550 MtrunA17_Chr7g0214071 47.093 172 72 4 7 176 7 161 4.54e-47 162
Msa1277550 MtrunA17_Chr1g0183741 44.848 165 73 3 13 175 8 156 6.34e-47 162
Msa1277550 MtrunA17_Chr5g0417001 46.429 168 78 4 15 177 14 174 1.09e-46 165
Msa1277550 MtrunA17_Chr8g0384721 43.750 176 82 4 9 180 1 163 2.10e-46 161
Msa1277550 MtrunA17_Chr7g0261411 44.785 163 72 3 13 173 8 154 1.07e-45 160
Msa1277550 MtrunA17_Chr5g0428991 45.930 172 83 2 7 178 17 178 1.38e-45 167
Msa1277550 MtrunA17_Chr1g0197351 43.850 187 96 4 17 203 44 221 1.71e-45 164
Msa1277550 MtrunA17_Chr2g0311661 45.238 168 83 4 15 175 20 185 4.45e-44 155
Msa1277550 MtrunA17_Chr3g0092671 48.125 160 71 4 17 175 7 155 5.99e-44 161
Msa1277550 MtrunA17_Chr1g0197361 45.625 160 75 3 17 175 10 158 8.74e-44 161
Msa1277550 MtrunA17_Chr8g0364791 43.558 163 76 3 17 176 8 157 1.03e-43 158
Msa1277550 MtrunA17_Chr5g0442771 43.293 164 87 2 15 175 18 178 2.01e-43 154
Msa1277550 MtrunA17_Chr3g0128111 44.382 178 84 5 18 193 45 209 4.44e-43 151
Msa1277550 MtrunA17_Chr1g0201021 49.231 130 65 1 17 146 21 149 4.52e-43 159
Msa1277550 MtrunA17_Chr4g0038751 45.714 175 75 4 17 188 17 174 8.09e-43 152
Msa1277550 MtrunA17_Chr3g0130101 43.125 160 81 2 17 176 9 158 1.08e-42 154
Msa1277550 MtrunA17_Chr3g0128151 44.970 169 83 2 7 175 14 172 1.68e-42 157
Msa1277550 MtrunA17_Chr8g0384201 42.945 163 77 3 17 176 8 157 7.64e-42 154
Msa1277550 MtrunA17_Chr4g0076731 42.593 162 78 3 15 175 54 201 7.69e-41 150
Msa1277550 MtrunA17_Chr3g0131911 40.449 178 94 3 3 176 2 171 6.47e-39 140
Msa1277550 MtrunA17_Chr8g0385991 41.899 179 87 5 3 176 2 168 8.02e-39 139
Msa1277550 MtrunA17_Chr3g0113001 47.945 146 66 3 64 208 14 150 1.33e-36 135
Msa1277550 MtrunA17_Chr4g0026141 38.172 186 100 6 16 195 6 182 2.71e-33 125
Msa1277550 MtrunA17_Chr2g0321631 39.665 179 84 8 16 183 5 170 7.60e-33 124
Msa1277550 MtrunA17_Chr3g0113031 48.837 129 60 2 81 208 3 126 3.21e-32 123
Msa1277550 MtrunA17_Chr8g0345671 32.188 320 163 14 15 310 11 300 1.83e-31 124
Msa1277550 MtrunA17_Chr4g0050701 37.423 163 86 4 15 175 11 159 3.63e-29 112
Msa1277550 MtrunA17_Chr2g0321741 41.129 124 66 2 29 147 1 122 8.67e-29 115
Msa1277550 MtrunA17_Chr7g0266701 35.829 187 108 5 15 195 4 184 1.33e-28 113
Msa1277550 MtrunA17_Chr8g0345691 40.123 162 78 6 14 172 11 156 3.83e-28 115
Msa1277550 MtrunA17_Chr8g0345711 38.323 167 90 7 15 173 12 173 8.00e-27 105
Msa1277550 MtrunA17_Chr7g0243371 50.617 81 38 1 71 149 17 97 2.13e-22 92.0
Msa1277550 MtrunA17_Chr8g0345731 38.562 153 79 7 15 158 24 170 4.32e-22 92.8
Msa1277550 MtrunA17_Chr8g0345721 33.908 174 81 6 18 160 38 208 1.16e-20 89.7
Msa1277550 MtrunA17_Chr8g0345741 42.017 119 64 4 26 141 2 118 9.89e-20 85.5
Msa1277550 MtrunA17_Chr8g0345701 36.986 146 71 6 13 141 5 146 1.25e-19 85.9
Msa1277550 MtrunA17_Chr3g0130321 32.934 167 94 7 14 174 6 160 1.92e-18 83.6
Msa1277550 MtrunA17_Chr8g0384351 30.723 166 83 7 14 179 9 142 5.97e-18 81.6
Msa1277550 MtrunA17_Chr1g0168571 32.121 165 89 8 23 179 13 162 7.49e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1277550 AT2G46770.1 52.262 442 120 11 1 430 2 364 1.80e-136 396
Msa1277550 AT3G61910.1 46.572 423 129 10 5 420 1 333 2.30e-112 333
Msa1277550 AT1G32770.1 50.000 346 115 8 1 333 1 301 1.45e-103 312
Msa1277550 AT1G79580.3 73.295 176 34 3 6 180 8 171 3.29e-90 278
Msa1277550 AT1G79580.5 73.295 176 34 3 6 180 8 171 3.29e-90 278
Msa1277550 AT1G79580.4 73.295 176 34 3 6 180 8 171 3.29e-90 278
Msa1277550 AT1G79580.2 73.295 176 34 3 6 180 8 171 3.29e-90 278
Msa1277550 AT1G79580.1 73.295 176 34 3 6 180 8 171 3.29e-90 278
Msa1277550 AT4G10350.1 68.132 182 47 2 5 186 1 171 5.67e-88 271
Msa1277550 AT2G18060.3 44.675 338 133 9 15 337 9 307 1.18e-87 271
Msa1277550 AT2G18060.1 44.675 338 133 9 15 337 9 307 1.18e-87 271
Msa1277550 AT4G36160.1 45.455 341 145 8 8 338 3 312 4.99e-87 270
Msa1277550 AT4G36160.3 45.455 341 145 8 8 338 3 312 4.99e-87 270
Msa1277550 AT4G36160.2 45.455 341 145 8 8 338 7 316 7.46e-87 270
Msa1277550 AT1G33280.1 69.461 167 39 1 15 181 8 162 7.38e-86 265
Msa1277550 AT1G12260.1 41.148 418 174 12 9 384 1 388 5.89e-85 265
Msa1277550 AT1G62700.1 41.602 387 170 7 9 362 1 364 3.26e-82 258
Msa1277550 AT1G62700.2 41.602 387 170 7 9 362 1 364 3.26e-82 258
Msa1277550 AT1G12260.2 69.412 170 37 2 9 176 1 157 6.38e-82 256
Msa1277550 AT5G66300.1 40.678 354 115 10 5 332 2 286 2.84e-81 252
Msa1277550 AT5G62380.2 41.691 343 122 9 13 332 5 292 3.79e-76 241
Msa1277550 AT5G62380.1 41.691 343 122 9 13 332 5 292 3.79e-76 241
Msa1277550 AT1G71930.2 65.854 164 45 1 12 175 6 158 7.87e-76 239
Msa1277550 AT1G71930.1 65.854 164 45 1 12 175 6 158 7.87e-76 239
Msa1277550 AT3G18400.1 54.118 170 63 3 12 180 2 157 2.03e-59 197
Msa1277550 AT3G17730.1 50.000 172 72 3 15 184 6 165 7.50e-58 190
Msa1277550 AT1G69490.1 48.066 181 86 2 7 187 1 173 1.14e-56 188
Msa1277550 AT5G07680.1 53.659 164 66 3 12 175 14 167 3.14e-56 189
Msa1277550 AT5G07680.2 54.037 161 64 3 15 175 3 153 4.27e-56 188
Msa1277550 AT2G24430.2 51.205 166 66 3 12 175 13 165 6.70e-56 187
Msa1277550 AT2G24430.1 51.205 166 66 3 12 175 13 165 6.70e-56 187
Msa1277550 AT3G04070.2 48.913 184 82 5 7 185 2 178 1.15e-55 188
Msa1277550 AT4G10350.2 66.142 127 34 1 60 186 7 124 2.00e-55 186
Msa1277550 AT5G61430.1 52.439 164 68 3 12 175 13 166 5.82e-55 186
Msa1277550 AT5G39610.1 52.469 162 67 3 15 176 20 171 6.24e-55 184
Msa1277550 AT3G04070.1 47.475 198 80 6 7 185 2 194 2.20e-54 185
Msa1277550 AT3G15170.1 53.374 163 64 4 12 172 17 169 8.37e-54 182
Msa1277550 AT5G17260.1 45.055 182 88 3 15 196 6 175 1.10e-53 186
Msa1277550 AT1G76420.1 50.307 163 66 3 15 175 22 171 1.10e-53 182
Msa1277550 AT3G03200.1 38.843 242 115 5 15 235 6 235 1.27e-53 186
Msa1277550 AT3G12977.1 47.674 172 79 2 12 183 15 175 2.73e-53 179
Msa1277550 AT1G65910.1 48.466 163 70 3 15 175 6 156 1.54e-52 186
Msa1277550 AT4G27410.2 49.390 164 71 3 12 175 11 162 2.08e-52 178
Msa1277550 AT3G29035.1 60.000 130 49 1 15 144 24 150 3.34e-52 178
Msa1277550 AT5G53950.1 51.786 168 68 5 11 175 12 169 5.90e-52 179
Msa1277550 AT5G18270.2 50.000 164 71 4 15 177 21 174 1.09e-51 177
Msa1277550 AT1G54330.1 52.761 163 60 4 15 175 6 153 1.16e-51 176
Msa1277550 AT1G56010.2 49.091 165 74 3 12 175 16 171 1.53e-51 176
Msa1277550 AT5G18270.1 49.390 164 72 4 15 177 21 174 2.03e-51 176
Msa1277550 AT5G46590.1 51.149 174 70 5 11 181 2 163 4.23e-51 174
Msa1277550 AT3G04060.1 50.617 162 69 4 15 175 20 171 2.25e-50 174
Msa1277550 AT1G61110.1 45.562 169 85 3 11 175 12 177 6.20e-50 172
Msa1277550 AT5G46590.2 55.263 152 61 4 11 158 2 150 1.19e-49 170
Msa1277550 AT4G27410.3 45.506 178 74 3 12 175 11 179 9.75e-49 169
Msa1277550 AT3G15500.1 46.667 165 76 3 12 176 11 163 9.90e-49 169
Msa1277550 AT5G63790.2 44.199 181 91 4 9 188 54 225 3.15e-48 167
Msa1277550 AT5G63790.1 44.199 181 91 4 9 188 44 215 3.24e-48 167
Msa1277550 AT1G52890.1 45.783 166 78 3 12 177 11 164 6.56e-48 167
Msa1277550 AT2G43000.1 47.170 159 73 2 17 175 20 167 1.92e-47 164
Msa1277550 AT3G10490.1 44.615 195 90 6 13 204 25 204 2.22e-47 163
Msa1277550 AT1G77450.1 41.538 195 102 4 14 208 9 191 2.43e-47 163
Msa1277550 AT5G13180.1 45.455 176 78 4 3 176 2 161 3.24e-47 163
Msa1277550 AT5G04410.1 46.626 163 77 2 13 175 7 159 3.45e-47 171
Msa1277550 AT3G10500.1 46.012 163 78 2 13 175 7 159 4.38e-47 170
Msa1277550 AT5G08790.1 46.707 167 79 4 15 180 7 164 5.31e-47 163
Msa1277550 AT3G10480.2 48.538 171 74 4 17 187 29 185 5.78e-47 167
Msa1277550 AT1G26870.1 46.012 163 83 2 17 177 18 177 6.21e-47 167
Msa1277550 AT5G39820.1 41.799 189 77 4 15 181 20 197 8.56e-47 164
Msa1277550 AT2G33480.1 44.318 176 83 2 1 176 1 161 9.61e-47 162
Msa1277550 AT3G10480.1 48.538 171 75 5 17 187 29 186 1.12e-46 167
Msa1277550 AT3G15510.1 45.562 169 85 4 19 183 21 186 1.63e-46 164
Msa1277550 AT3G10490.2 45.550 191 86 6 17 204 29 204 3.16e-46 166
Msa1277550 AT1G01720.1 46.012 163 79 3 14 176 6 159 3.39e-46 161
Msa1277550 AT4G17980.1 46.512 172 72 5 11 175 2 160 7.83e-46 159
Msa1277550 AT2G33480.2 44.318 176 81 3 1 176 1 159 1.32e-45 159
Msa1277550 AT1G33060.1 43.005 193 81 4 15 207 24 187 1.35e-45 167
Msa1277550 AT1G33060.2 43.005 193 81 4 15 207 24 187 1.39e-45 167
Msa1277550 AT4G17980.2 46.512 172 72 5 11 175 2 160 2.03e-45 159
Msa1277550 AT1G32510.1 45.143 175 76 5 13 178 4 167 3.41e-45 158
Msa1277550 AT5G24590.2 43.889 180 90 3 7 185 5 174 4.37e-45 162
Msa1277550 AT4G35580.1 46.012 163 78 2 15 177 9 161 4.88e-44 161
Msa1277550 AT4G35580.2 46.012 163 78 2 15 177 9 161 5.08e-44 161
Msa1277550 AT4G35580.3 46.012 163 78 2 15 177 9 161 5.32e-44 161
Msa1277550 AT3G49530.2 44.000 175 85 5 4 176 2 165 6.48e-43 155
Msa1277550 AT5G09330.5 41.818 165 86 2 11 175 2 156 8.24e-43 157
Msa1277550 AT5G09330.2 41.818 165 86 2 11 175 2 156 8.24e-43 157
Msa1277550 AT5G09330.4 41.818 165 86 2 11 175 2 156 8.24e-43 157
Msa1277550 AT5G09330.3 41.818 165 86 2 11 175 2 156 8.24e-43 157
Msa1277550 AT5G09330.1 41.818 165 86 2 11 175 2 156 8.24e-43 157
Msa1277550 AT3G49530.1 44.000 175 85 5 4 176 2 165 1.09e-42 156
Msa1277550 AT2G02450.1 40.206 194 100 4 15 206 51 230 3.01e-42 153
Msa1277550 AT1G52880.1 47.239 163 78 3 19 177 21 179 3.05e-42 152
Msa1277550 AT5G64060.1 41.212 165 87 2 11 175 2 156 3.85e-42 152
Msa1277550 AT3G10480.3 40.865 208 77 6 13 187 25 219 5.12e-42 155
Msa1277550 AT2G02450.2 40.206 194 100 4 15 206 51 230 5.95e-42 153
Msa1277550 AT1G34180.3 47.287 129 67 1 17 145 18 145 5.56e-41 151
Msa1277550 AT1G34190.1 46.154 130 69 1 17 146 18 146 9.94e-41 152
Msa1277550 AT4G28530.1 41.209 182 71 5 13 175 8 172 1.16e-40 148
Msa1277550 AT1G34180.1 47.287 129 67 1 17 145 18 145 1.44e-40 152
Msa1277550 AT2G27300.1 40.000 170 81 3 5 174 7 155 4.24e-40 146
Msa1277550 AT2G17040.1 41.765 170 79 4 17 183 8 160 6.19e-40 144
Msa1277550 AT1G34180.4 44.286 140 67 1 17 145 18 157 1.03e-39 148
Msa1277550 AT1G34180.2 44.286 140 67 1 17 145 18 157 2.21e-39 149
Msa1277550 AT5G22290.1 38.554 166 85 2 13 178 19 167 1.65e-37 139
Msa1277550 AT3G12910.1 43.750 176 69 7 17 175 23 185 7.54e-37 137
Msa1277550 AT5G04395.1 46.622 148 66 3 12 146 25 172 1.45e-36 132
Msa1277550 AT1G56010.1 55.340 103 40 1 73 175 8 104 1.45e-35 132
Msa1277550 AT3G12977.2 47.581 124 54 2 60 183 10 122 4.24e-35 130
Msa1277550 AT5G61430.2 54.286 105 41 2 71 175 6 103 6.88e-35 130
Msa1277550 AT3G44290.2 42.400 125 70 1 17 141 16 138 1.24e-34 129
Msa1277550 AT3G44290.1 42.400 125 70 1 17 141 16 138 6.08e-34 130
Msa1277550 AT1G32870.1 39.884 173 89 5 5 175 1 160 2.17e-33 132
Msa1277550 AT1G32870.2 39.884 173 89 5 5 175 1 160 2.19e-33 132
Msa1277550 AT2G18060.2 34.630 257 114 9 96 337 2 219 2.48e-33 127
Msa1277550 AT1G32870.3 39.884 173 89 5 5 175 37 196 3.87e-33 131
Msa1277550 AT2G33480.3 46.226 106 48 1 71 176 8 104 7.23e-28 110
Msa1277550 AT5G22380.1 38.776 147 80 5 14 153 4 147 1.33e-24 102
Msa1277550 AT3G44350.2 34.302 172 96 7 18 183 8 168 3.47e-24 100
Msa1277550 AT5G64530.1 34.524 168 88 6 15 175 3 155 4.32e-24 99.0
Msa1277550 AT5G64530.2 40.602 133 62 5 15 145 3 120 1.87e-23 96.7
Msa1277550 AT3G44350.1 38.571 140 77 5 18 151 8 144 2.74e-23 96.3
Msa1277550 AT4G28530.2 39.552 134 58 4 13 127 8 137 5.51e-23 99.4
Msa1277550 AT3G04420.2 40.152 132 68 3 16 141 4 130 5.52e-23 98.6
Msa1277550 AT1G02230.1 42.222 135 61 6 16 141 4 130 8.47e-23 99.4
Msa1277550 AT3G04420.1 40.152 132 68 3 16 141 4 130 1.36e-22 98.6
Msa1277550 AT2G43000.2 45.833 96 44 1 80 175 2 89 2.78e-22 94.4
Msa1277550 AT4G01520.1 35.606 132 81 2 16 143 5 136 2.13e-21 94.4
Msa1277550 AT4G01540.3 36.641 131 77 3 18 143 7 136 2.70e-21 95.9
Msa1277550 AT4G01540.4 36.641 131 77 3 18 143 7 136 4.75e-21 94.7
Msa1277550 AT4G01540.1 36.641 131 77 3 18 143 7 136 4.98e-21 95.5
Msa1277550 AT1G02250.1 41.667 132 66 6 16 141 4 130 6.28e-21 94.0
Msa1277550 AT4G01540.2 36.641 131 77 3 18 143 7 136 6.49e-21 94.7
Msa1277550 AT4G01550.1 37.692 130 76 3 18 143 7 135 2.37e-20 93.6
Msa1277550 AT3G10490.4 42.735 117 50 5 91 204 2 104 2.04e-19 89.4
Msa1277550 AT3G10490.3 42.735 117 50 5 91 204 2 104 2.04e-19 89.4
Msa1277550 AT1G02220.1 36.025 161 84 6 14 165 2 152 2.21e-19 90.1
Msa1277550 AT5G50820.1 33.099 142 79 5 7 143 8 138 3.83e-17 79.7
Msa1277550 AT5G14000.2 33.094 139 86 2 7 143 7 140 6.64e-17 78.2
Msa1277550 AT1G01010.1 36.496 137 74 6 18 144 6 139 1.98e-16 81.3
Msa1277550 AT5G14000.1 33.094 139 86 2 7 143 7 140 2.64e-16 77.8
Msa1277550 AT5G22290.2 37.805 82 36 1 97 178 2 68 3.09e-13 69.7
Msa1277550 AT3G56530.1 27.848 158 110 2 3 158 40 195 4.03e-13 70.5
Msa1277550 AT3G04430.1 35.075 134 70 6 21 141 6 135 1.66e-11 63.5

Find 130 sgRNAs with CRISPR-Local

Find 306 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTCCATGCTTGTTGATTT+TGG 0.074213 8_3:+13220055 None:intergenic
TTACAGAATATATGTTAAAT+TGG 0.215456 8_3:-13219379 Msa1277550:three_prime_UTR
GAGAAAGAAGAAGAATAAAA+AGG 0.224099 8_3:+13219509 None:intergenic
GCAAATTACAATAATAATTA+TGG 0.234766 8_3:-13220166 Msa1277550:CDS
GTACCTCAATATTATGCTTT+TGG 0.254671 8_3:-13219275 Msa1277550:three_prime_UTR
AAGTTGATGATGATGATTTA+AGG 0.268850 8_3:+13219741 None:intergenic
CTCAAGTTCCTCCTGGATTC+CGG 0.279380 8_3:-13221112 Msa1277550:CDS
GCGCTACAGCCGCAGGGTTC+TGG 0.282580 8_3:-13220686 Msa1277550:CDS
AACATGAGCATATCTGTTAA+TGG 0.305797 8_3:-13221140 Msa1277550:CDS
ATGGACAAACTGAGGCTTCT+AGG 0.319602 8_3:-13219832 Msa1277550:CDS
TTTGTAGAGAAATGCAAAAT+AGG 0.328623 8_3:-13220783 Msa1277550:intron
GCTCATGTTATCAGGCATTA+AGG 0.334403 8_3:+13221154 None:intergenic
AGCGCGATTGGTTCGTGTTC+CGG 0.335099 8_3:+13220704 None:intergenic
TTATATATAGCAATGGAAAA+AGG 0.350881 8_3:-13220641 Msa1277550:CDS
GTGATGGTGGTCTTACTAAT+TGG 0.352073 8_3:-13219889 Msa1277550:CDS
ACAGATATGCTCATGTTATC+AGG 0.354451 8_3:+13221146 None:intergenic
CCTCTCCAGAAGGGCTGTCT+AGG 0.360170 8_3:+13220287 None:intergenic
TCTTACTAATTGGGTAGCTT+TGG 0.361121 8_3:-13219879 Msa1277550:CDS
TGCAATTATTCAAGTAGATA+TGG 0.369279 8_3:-13220005 Msa1277550:CDS
GGAGCAAATACTTCAACAAA+TGG 0.371761 8_3:-13220218 Msa1277550:CDS
CTTGTTGCTTCTCAATTGAA+TGG 0.385288 8_3:-13219851 Msa1277550:CDS
TTGGATACTTCTTGTCTTTG+TGG 0.389435 8_3:+13220727 None:intergenic
AAAACCCTAGACAGCCCTTC+TGG 0.397489 8_3:-13220292 Msa1277550:CDS
AACTGAGGCTTCTAGGCAAT+TGG 0.397982 8_3:-13219825 Msa1277550:CDS
GATGATGATGATGCCTCTAA+TGG 0.411646 8_3:+13219929 None:intergenic
TTTCTTCCTCAAGTCAATAA+GGG 0.412726 8_3:-13219411 Msa1277550:three_prime_UTR
CTTCTTCAGTTGGATGAAAC+CGG 0.420245 8_3:+13221093 None:intergenic
TACTTGTGATGAAGGAGCTT+TGG 0.423237 8_3:-13220239 Msa1277550:CDS
TGCTTTAATGACCCCACAAT+GGG 0.424079 8_3:-13219800 Msa1277550:CDS
ACTTACCAGATTGGTGTCAT+TGG 0.428069 8_3:+13220518 None:intergenic
CATGGTTAATAATCCATTAG+AGG 0.428212 8_3:-13219942 Msa1277550:CDS
TAATGAGGTGGTGTGTGTAC+TGG 0.438957 8_3:+13221311 None:intergenic
GTATCTAATACTTACCAGAT+TGG 0.444383 8_3:+13220509 None:intergenic
CCCTGCGGCTGTAGCGCGAT+TGG 0.449718 8_3:+13220692 None:intergenic
TGAGAGAACACATTCAAAAC+AGG 0.456774 8_3:+13221258 None:intergenic
CTTCTTCTTCCCTCTCCAGA+AGG 0.463749 8_3:+13220277 None:intergenic
TGAAGAAGCTCTTCTTCAGT+TGG 0.465783 8_3:+13221083 None:intergenic
CACCACCAATGACACCAATC+TGG 0.467050 8_3:-13220523 Msa1277550:intron
TGATGGTGGTCTTACTAATT+GGG 0.469019 8_3:-13219888 Msa1277550:CDS
GAACAACTCCACAAAATGAT+TGG 0.470282 8_3:-13220761 Msa1277550:CDS
TCAAAACAGGTAGGAAAGAA+AGG 0.471456 8_3:+13221271 None:intergenic
ACCAATCGCGCTACAGCCGC+AGG 0.471757 8_3:-13220693 Msa1277550:CDS
AACAATGAGAACAACAATGA+TGG 0.475096 8_3:-13220034 Msa1277550:CDS
AGACTATATATATGTGTTGT+GGG 0.475640 8_3:+13221351 None:intergenic
AGTTGATGATGATGATTTAA+GGG 0.477571 8_3:+13219742 None:intergenic
TTCTTCTTCCCTCTCCAGAA+GGG 0.478150 8_3:+13220278 None:intergenic
CTAATTGGGTAGCTTTGGAT+AGG 0.478615 8_3:-13219874 Msa1277550:CDS
ATGGTGGTCAAGAAGAAGGA+TGG 0.479948 8_3:-13220351 Msa1277550:CDS
GGACAATCTCAAGTTCCTCC+TGG 0.485001 8_3:-13221119 Msa1277550:CDS
CTCTCCAGAAGGGCTGTCTA+GGG 0.487859 8_3:+13220288 None:intergenic
GTTGGATGAAACCGGAATCC+AGG 0.489389 8_3:+13221101 None:intergenic
CTTGAACCATGGGACATTCA+AGG 0.497760 8_3:-13220987 Msa1277550:intron
AAGAAGGATGGGTGGTGTGT+AGG 0.502710 8_3:-13220339 Msa1277550:CDS
ATCTATTTCACAATCGAACA+AGG 0.511378 8_3:+13219483 None:intergenic
GAGCAAATACTTCAACAAAT+GGG 0.518882 8_3:-13220217 Msa1277550:CDS
TACAAAGGTCGTGCTCCTCA+TGG 0.519789 8_3:-13220591 Msa1277550:CDS
TTAGTGCAATATCCCATTGT+GGG 0.521916 8_3:+13219788 None:intergenic
CGATTGGTTCGTGTTCCGGT+TGG 0.532825 8_3:+13220708 None:intergenic
ATATATAACTTTGTCACGAC+CGG 0.533759 8_3:+13220656 None:intergenic
ATATGTGTTGTGGGACAGAA+AGG 0.533889 8_3:+13221360 None:intergenic
TACCAGATTGGTGTCATTGG+TGG 0.534532 8_3:+13220521 None:intergenic
GTTCCAGAGGTCAATCTCAC+TGG 0.538763 8_3:+13219628 None:intergenic
GGTGATGGTGGTCAAGAAGA+AGG 0.538922 8_3:-13220355 Msa1277550:CDS
CACAAGTATCATACAAGTGA+TGG 0.540165 8_3:+13220254 None:intergenic
AGAGGCATCATCATCATCAA+TGG 0.541656 8_3:-13219924 Msa1277550:CDS
CAGACTATATATATGTGTTG+TGG 0.545991 8_3:+13221350 None:intergenic
CTAGACAGCCCTTCTGGAGA+GGG 0.547964 8_3:-13220286 Msa1277550:CDS
AGCTTCTTCAATACTACTTG+AGG 0.548206 8_3:-13221070 Msa1277550:CDS
TATAATCCCTTATTGACTTG+AGG 0.548718 8_3:+13219405 None:intergenic
AAAGACAAGAAGTATCCAAC+CGG 0.551006 8_3:-13220723 Msa1277550:CDS
TTGCCAAAAGCATAATATTG+AGG 0.552624 8_3:+13219272 None:intergenic
GATATGGCTAATGAAAATGA+AGG 0.553711 8_3:-13219989 Msa1277550:CDS
ATTACAATAATAATTATGGA+AGG 0.553899 8_3:-13220162 Msa1277550:CDS
ATAATTATGGAAGGTTTGCA+AGG 0.557854 8_3:-13220153 Msa1277550:CDS
CTCTGATCATCATCATAACA+TGG 0.564367 8_3:-13219960 Msa1277550:CDS
GACAAAGTTATATATAGCAA+TGG 0.565094 8_3:-13220648 Msa1277550:CDS
TTGTTGAGAGTAGATTCAAA+AGG 0.565100 8_3:+13220130 None:intergenic
ATCTCAACAAGCTTGAACCA+TGG 0.570034 8_3:-13220998 Msa1277550:CDS
GAGTCCAAAATCAACAAGCA+TGG 0.570658 8_3:-13220059 Msa1277550:CDS
GTAGCAAAAGAAGATAAGCT+AGG 0.574439 8_3:+13221193 None:intergenic
TAGGAAAGAAAGGAAAGGAA+AGG 0.575917 8_3:+13221281 None:intergenic
TTGTATGATACTTGTGATGA+AGG 0.576333 8_3:-13220247 Msa1277550:CDS
AGGAAAGGTGAAAGATAATG+AGG 0.576981 8_3:+13221296 None:intergenic
TATCTACTTGAATAATTGCA+TGG 0.578399 8_3:+13220008 None:intergenic
GATGATGATGATTTAAGGGT+GGG 0.578828 8_3:+13219746 None:intergenic
TGGTGGTCAAGAAGAAGGAT+GGG 0.580328 8_3:-13220350 Msa1277550:CDS
ATATTACCTTGAATGTCCCA+TGG 0.582876 8_3:+13220981 None:intergenic
ACAATGAGAACAACAATGAT+GGG 0.583551 8_3:-13220033 Msa1277550:CDS
TCTCAACAAGCTTGAACCAT+GGG 0.584241 8_3:-13220997 Msa1277550:CDS
ACAAATGGGAAGGGGTTGCA+AGG 0.584361 8_3:-13220203 Msa1277550:CDS
ATGGTGGTTATAATAATGAA+AGG 0.589878 8_3:-13220105 Msa1277550:CDS
AAATACTTCAACAAATGGGA+AGG 0.591385 8_3:-13220213 Msa1277550:CDS
TCAATTGAATGGACAAACTG+AGG 0.592361 8_3:-13219840 Msa1277550:CDS
AATACTTCAACAAATGGGAA+GGG 0.596086 8_3:-13220212 Msa1277550:CDS
ATGCCAGTGAGATTGACCTC+TGG 0.596304 8_3:-13219631 Msa1277550:CDS
CCTAGACAGCCCTTCTGGAG+AGG 0.596746 8_3:-13220287 Msa1277550:CDS
ATTAGTGCAATATCCCATTG+TGG 0.600538 8_3:+13219787 None:intergenic
TTAAGGTAACTAAGAGAGAG+TGG 0.601640 8_3:+13221171 None:intergenic
GAATCTACTCTCAACAACAA+TGG 0.604976 8_3:-13220124 Msa1277550:CDS
TTGCTTTAATGACCCCACAA+TGG 0.606154 8_3:-13219801 Msa1277550:CDS
CAACATCACGAATAACATCA+AGG 0.607029 8_3:+13221021 None:intergenic
GCAGGGTTCTGGAAAGCCAC+CGG 0.607542 8_3:-13220675 Msa1277550:CDS
ATACTTCAACAAATGGGAAG+GGG 0.611109 8_3:-13220211 Msa1277550:CDS
TGATGATGATGATTTAAGGG+TGG 0.618237 8_3:+13219745 None:intergenic
ACAGGTAGGAAAGAAAGGAA+AGG 0.621168 8_3:+13221276 None:intergenic
TATAACTTTGTCACGACCGG+TGG 0.623261 8_3:+13220659 None:intergenic
GTGTCGAATATGATTGGTGA+TGG 0.624396 8_3:-13220370 Msa1277550:CDS
CTCACTGGCATAGTCATGTG+AGG 0.627225 8_3:+13219643 None:intergenic
ATGGTGATAGCATGTGGTGA+TGG 0.628336 8_3:-13219905 Msa1277550:CDS
TAAGCTAGGTAGCTATGTAG+TGG 0.632683 8_3:+13221207 None:intergenic
TCGAATATGATTGGTGATGG+TGG 0.634462 8_3:-13220367 Msa1277550:CDS
GTGATAGCATGTGGTGATGG+TGG 0.637758 8_3:-13219902 Msa1277550:CDS
TCTATTTCACAATCGAACAA+GGG 0.644118 8_3:+13219484 None:intergenic
AGAACACATTCAAAACAGGT+AGG 0.646739 8_3:+13221262 None:intergenic
TCACTGGCATAGTCATGTGA+GGG 0.651790 8_3:+13219644 None:intergenic
CCAATCGCGCTACAGCCGCA+GGG 0.651911 8_3:-13220692 Msa1277550:CDS
TCTACTCTCAACAACAATGG+TGG 0.656048 8_3:-13220121 Msa1277550:CDS
GTACTGGAATGAGTATGTAA+AGG 0.658470 8_3:+13221327 None:intergenic
TGGTCAAGAAGAAGGATGGG+TGG 0.660445 8_3:-13220347 Msa1277550:CDS
ATATGGCTAATGAAAATGAA+GGG 0.670014 8_3:-13219988 Msa1277550:CDS
TTGATCGAGCAAAGTTCCAG+AGG 0.677993 8_3:+13219615 None:intergenic
TAGTGCAATATCCCATTGTG+GGG 0.681689 8_3:+13219789 None:intergenic
AAAGGTGAAAGATAATGAGG+TGG 0.692128 8_3:+13221299 None:intergenic
TAGTGGTTCTAGATTCACAA+GGG 0.694470 8_3:+13221224 None:intergenic
GTAGTGGTTCTAGATTCACA+AGG 0.706064 8_3:+13221223 None:intergenic
GGATGAAACCGGAATCCAGG+AGG 0.718093 8_3:+13221104 None:intergenic
TCATCAATGGTGATAGCATG+TGG 0.720641 8_3:-13219911 Msa1277550:CDS
GTATTCGACACGTGACACAG+TGG 0.748440 8_3:+13219566 None:intergenic
GGTGGCTTTCCAGAACCCTG+CGG 0.771672 8_3:+13220677 None:intergenic
TTCAGAAGATGACAACAACG+AGG 0.812789 8_3:+13219589 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TACTTATATAGTAAATAAAT+TGG - chr8_3:13220185-13220204 Msa1277550:CDS 10.0%
!! TACTTATATAGTAAATAAAT+TGG - chr8_3:13220185-13220204 Msa1277550:CDS 10.0%
!! ATGAATGAAGAAATAAATAA+AGG + chr8_3:13219680-13219699 None:intergenic 15.0%
!! GCAAATTACAATAATAATTA+TGG - chr8_3:13220446-13220465 Msa1277550:intron 15.0%
!! ATTACAATAATAATTATGGA+AGG - chr8_3:13220450-13220469 Msa1277550:intron 15.0%
!! TTACAGAATATATGTTAAAT+TGG - chr8_3:13221233-13221252 Msa1277550:five_prime_UTR 15.0%
!! ATGAATGAAGAAATAAATAA+AGG + chr8_3:13219680-13219699 None:intergenic 15.0%
!! GCAAATTACAATAATAATTA+TGG - chr8_3:13220446-13220465 Msa1277550:intron 15.0%
!! ATTACAATAATAATTATGGA+AGG - chr8_3:13220450-13220469 Msa1277550:intron 15.0%
!! TTACAGAATATATGTTAAAT+TGG - chr8_3:13221233-13221252 Msa1277550:five_prime_UTR 15.0%
!! TAAATCAAAGGAATAAAGAA+AGG + chr8_3:13219728-13219747 None:intergenic 20.0%
!! TTATATATAGCAATGGAAAA+AGG - chr8_3:13219971-13219990 Msa1277550:CDS 20.0%
!! AGAAAGAAGAAGAATAAAAA+GGG + chr8_3:13221105-13221124 None:intergenic 20.0%
!! TAAATCAAAGGAATAAAGAA+AGG + chr8_3:13219728-13219747 None:intergenic 20.0%
!! TTATATATAGCAATGGAAAA+AGG - chr8_3:13219971-13219990 Msa1277550:CDS 20.0%
!! AGAAAGAAGAAGAATAAAAA+GGG + chr8_3:13221105-13221124 None:intergenic 20.0%
! AGACTATATATATGTGTTGT+GGG + chr8_3:13219264-13219283 None:intergenic 25.0%
! CACTTGAAGAAATAAATCAA+AGG + chr8_3:13219740-13219759 None:intergenic 25.0%
!! CTTTGATTTATTTCTTCAAG+TGG - chr8_3:13219738-13219757 Msa1277550:CDS 25.0%
! GGAAGACAATAAATATATAC+TGG - chr8_3:13219759-13219778 Msa1277550:CDS 25.0%
!!! GTATCGTGTTTTTTATTTTG+TGG - chr8_3:13219788-13219807 Msa1277550:CDS 25.0%
! TTTGTAGAGAAATGCAAAAT+AGG - chr8_3:13219829-13219848 Msa1277550:CDS 25.0%
! GACAAAGTTATATATAGCAA+TGG - chr8_3:13219964-13219983 Msa1277550:CDS 25.0%
! ATTAGATACAAATATACGTC+TGG - chr8_3:13220117-13220136 Msa1277550:CDS 25.0%
!! CTTTATTGCGACAAAATTTT+AGG - chr8_3:13220220-13220239 Msa1277550:CDS 25.0%
! ATGGTGGTTATAATAATGAA+AGG - chr8_3:13220507-13220526 Msa1277550:intron 25.0%
! TATCTACTTGAATAATTGCA+TGG + chr8_3:13220607-13220626 None:intergenic 25.0%
! TGCAATTATTCAAGTAGATA+TGG - chr8_3:13220607-13220626 Msa1277550:CDS 25.0%
! ATATGGCTAATGAAAATGAA+GGG - chr8_3:13220624-13220643 Msa1277550:CDS 25.0%
!!! AGTTGATGATGATGATTTAA+GGG + chr8_3:13220873-13220892 None:intergenic 25.0%
!!! AAGTTGATGATGATGATTTA+AGG + chr8_3:13220874-13220893 None:intergenic 25.0%
! GAAAGAAGAAGAATAAAAAG+GGG + chr8_3:13221104-13221123 None:intergenic 25.0%
! GAGAAAGAAGAAGAATAAAA+AGG + chr8_3:13221106-13221125 None:intergenic 25.0%
! AGACTATATATATGTGTTGT+GGG + chr8_3:13219264-13219283 None:intergenic 25.0%
! CACTTGAAGAAATAAATCAA+AGG + chr8_3:13219740-13219759 None:intergenic 25.0%
!! CTTTGATTTATTTCTTCAAG+TGG - chr8_3:13219738-13219757 Msa1277550:CDS 25.0%
! GGAAGACAATAAATATATAC+TGG - chr8_3:13219759-13219778 Msa1277550:CDS 25.0%
!!! GTATCGTGTTTTTTATTTTG+TGG - chr8_3:13219788-13219807 Msa1277550:CDS 25.0%
! TTTGTAGAGAAATGCAAAAT+AGG - chr8_3:13219829-13219848 Msa1277550:CDS 25.0%
! GACAAAGTTATATATAGCAA+TGG - chr8_3:13219964-13219983 Msa1277550:CDS 25.0%
! ATTAGATACAAATATACGTC+TGG - chr8_3:13220117-13220136 Msa1277550:CDS 25.0%
!! CTTTATTGCGACAAAATTTT+AGG - chr8_3:13220220-13220239 Msa1277550:CDS 25.0%
! ATGGTGGTTATAATAATGAA+AGG - chr8_3:13220507-13220526 Msa1277550:intron 25.0%
! TATCTACTTGAATAATTGCA+TGG + chr8_3:13220607-13220626 None:intergenic 25.0%
! TGCAATTATTCAAGTAGATA+TGG - chr8_3:13220607-13220626 Msa1277550:CDS 25.0%
! ATATGGCTAATGAAAATGAA+GGG - chr8_3:13220624-13220643 Msa1277550:CDS 25.0%
!!! AGTTGATGATGATGATTTAA+GGG + chr8_3:13220873-13220892 None:intergenic 25.0%
!!! AAGTTGATGATGATGATTTA+AGG + chr8_3:13220874-13220893 None:intergenic 25.0%
! GAAAGAAGAAGAATAAAAAG+GGG + chr8_3:13221104-13221123 None:intergenic 25.0%
! GAGAAAGAAGAAGAATAAAA+AGG + chr8_3:13221106-13221125 None:intergenic 25.0%
CAGACTATATATATGTGTTG+TGG + chr8_3:13219265-13219284 None:intergenic 30.0%
! AATGTGTTCTCTCAACTTTT+TGG - chr8_3:13219363-13219382 Msa1277550:three_prime_UTR 30.0%
! ATGTGTTCTCTCAACTTTTT+GGG - chr8_3:13219364-13219383 Msa1277550:three_prime_UTR 30.0%
AACATGAGCATATCTGTTAA+TGG - chr8_3:13219472-13219491 Msa1277550:three_prime_UTR 30.0%
!!! AAGAAGTACCAATCATTTTG+TGG + chr8_3:13219862-13219881 None:intergenic 30.0%
ATATATAACTTTGTCACGAC+CGG + chr8_3:13219959-13219978 None:intergenic 30.0%
TATAGCAATGGAAAAAGGAT+TGG - chr8_3:13219976-13219995 Msa1277550:CDS 30.0%
!!! AAGACTCTTGTTTTCTACAA+AGG - chr8_3:13220006-13220025 Msa1277550:CDS 30.0%
GTATCTAATACTTACCAGAT+TGG + chr8_3:13220106-13220125 None:intergenic 30.0%
!!! TTTTAGGTGTCGAATATGAT+TGG - chr8_3:13220236-13220255 Msa1277550:CDS 30.0%
TTGTATGATACTTGTGATGA+AGG - chr8_3:13220365-13220384 Msa1277550:CDS 30.0%
GAGCAAATACTTCAACAAAT+GGG - chr8_3:13220395-13220414 Msa1277550:intron 30.0%
AAATACTTCAACAAATGGGA+AGG - chr8_3:13220399-13220418 Msa1277550:intron 30.0%
AATACTTCAACAAATGGGAA+GGG - chr8_3:13220400-13220419 Msa1277550:intron 30.0%
ATAATTATGGAAGGTTTGCA+AGG - chr8_3:13220459-13220478 Msa1277550:intron 30.0%
TTGTTGAGAGTAGATTCAAA+AGG + chr8_3:13220485-13220504 None:intergenic 30.0%
AACAATGAGAACAACAATGA+TGG - chr8_3:13220578-13220597 Msa1277550:CDS 30.0%
ACAATGAGAACAACAATGAT+GGG - chr8_3:13220579-13220598 Msa1277550:CDS 30.0%
GATATGGCTAATGAAAATGA+AGG - chr8_3:13220623-13220642 Msa1277550:CDS 30.0%
CATGGTTAATAATCCATTAG+AGG - chr8_3:13220670-13220689 Msa1277550:CDS 30.0%
TCTATTTCACAATCGAACAA+GGG + chr8_3:13221131-13221150 None:intergenic 30.0%
ATCTATTTCACAATCGAACA+AGG + chr8_3:13221132-13221151 None:intergenic 30.0%
! TTTTCTTCCTCAAGTCAATA+AGG - chr8_3:13221200-13221219 Msa1277550:five_prime_UTR 30.0%
TTTCTTCCTCAAGTCAATAA+GGG - chr8_3:13221201-13221220 Msa1277550:five_prime_UTR 30.0%
!! TATAATCCCTTATTGACTTG+AGG + chr8_3:13221210-13221229 None:intergenic 30.0%
! GTACCTCAATATTATGCTTT+TGG - chr8_3:13221337-13221356 Msa1277550:five_prime_UTR 30.0%
! TTGCCAAAAGCATAATATTG+AGG + chr8_3:13221343-13221362 None:intergenic 30.0%
CAGACTATATATATGTGTTG+TGG + chr8_3:13219265-13219284 None:intergenic 30.0%
! AATGTGTTCTCTCAACTTTT+TGG - chr8_3:13219363-13219382 Msa1277550:three_prime_UTR 30.0%
! ATGTGTTCTCTCAACTTTTT+GGG - chr8_3:13219364-13219383 Msa1277550:three_prime_UTR 30.0%
AACATGAGCATATCTGTTAA+TGG - chr8_3:13219472-13219491 Msa1277550:three_prime_UTR 30.0%
!!! AAGAAGTACCAATCATTTTG+TGG + chr8_3:13219862-13219881 None:intergenic 30.0%
ATATATAACTTTGTCACGAC+CGG + chr8_3:13219959-13219978 None:intergenic 30.0%
TATAGCAATGGAAAAAGGAT+TGG - chr8_3:13219976-13219995 Msa1277550:CDS 30.0%
!!! AAGACTCTTGTTTTCTACAA+AGG - chr8_3:13220006-13220025 Msa1277550:CDS 30.0%
GTATCTAATACTTACCAGAT+TGG + chr8_3:13220106-13220125 None:intergenic 30.0%
!!! TTTTAGGTGTCGAATATGAT+TGG - chr8_3:13220236-13220255 Msa1277550:CDS 30.0%
TTGTATGATACTTGTGATGA+AGG - chr8_3:13220365-13220384 Msa1277550:CDS 30.0%
GAGCAAATACTTCAACAAAT+GGG - chr8_3:13220395-13220414 Msa1277550:intron 30.0%
AAATACTTCAACAAATGGGA+AGG - chr8_3:13220399-13220418 Msa1277550:intron 30.0%
AATACTTCAACAAATGGGAA+GGG - chr8_3:13220400-13220419 Msa1277550:intron 30.0%
ATAATTATGGAAGGTTTGCA+AGG - chr8_3:13220459-13220478 Msa1277550:intron 30.0%
TTGTTGAGAGTAGATTCAAA+AGG + chr8_3:13220485-13220504 None:intergenic 30.0%
AACAATGAGAACAACAATGA+TGG - chr8_3:13220578-13220597 Msa1277550:CDS 30.0%
ACAATGAGAACAACAATGAT+GGG - chr8_3:13220579-13220598 Msa1277550:CDS 30.0%
GATATGGCTAATGAAAATGA+AGG - chr8_3:13220623-13220642 Msa1277550:CDS 30.0%
CATGGTTAATAATCCATTAG+AGG - chr8_3:13220670-13220689 Msa1277550:CDS 30.0%
TCTATTTCACAATCGAACAA+GGG + chr8_3:13221131-13221150 None:intergenic 30.0%
ATCTATTTCACAATCGAACA+AGG + chr8_3:13221132-13221151 None:intergenic 30.0%
! TTTTCTTCCTCAAGTCAATA+AGG - chr8_3:13221200-13221219 Msa1277550:five_prime_UTR 30.0%
TTTCTTCCTCAAGTCAATAA+GGG - chr8_3:13221201-13221220 Msa1277550:five_prime_UTR 30.0%
!! TATAATCCCTTATTGACTTG+AGG + chr8_3:13221210-13221229 None:intergenic 30.0%
! GTACCTCAATATTATGCTTT+TGG - chr8_3:13221337-13221356 Msa1277550:five_prime_UTR 30.0%
! TTGCCAAAAGCATAATATTG+AGG + chr8_3:13221343-13221362 None:intergenic 30.0%
GTACTGGAATGAGTATGTAA+AGG + chr8_3:13219288-13219307 None:intergenic 35.0%
AAAGGTGAAAGATAATGAGG+TGG + chr8_3:13219316-13219335 None:intergenic 35.0%
AGGAAAGGTGAAAGATAATG+AGG + chr8_3:13219319-13219338 None:intergenic 35.0%
TAGGAAAGAAAGGAAAGGAA+AGG + chr8_3:13219334-13219353 None:intergenic 35.0%
TCAAAACAGGTAGGAAAGAA+AGG + chr8_3:13219344-13219363 None:intergenic 35.0%
AGAACACATTCAAAACAGGT+AGG + chr8_3:13219353-13219372 None:intergenic 35.0%
TGAGAGAACACATTCAAAAC+AGG + chr8_3:13219357-13219376 None:intergenic 35.0%
!! TAGTGGTTCTAGATTCACAA+GGG + chr8_3:13219391-13219410 None:intergenic 35.0%
GTAGCAAAAGAAGATAAGCT+AGG + chr8_3:13219422-13219441 None:intergenic 35.0%
TTAAGGTAACTAAGAGAGAG+TGG + chr8_3:13219444-13219463 None:intergenic 35.0%
ACAGATATGCTCATGTTATC+AGG + chr8_3:13219469-13219488 None:intergenic 35.0%
AGCTTCTTCAATACTACTTG+AGG - chr8_3:13219542-13219561 Msa1277550:exon 35.0%
CAACATCACGAATAACATCA+AGG + chr8_3:13219594-13219613 None:intergenic 35.0%
ATATTACCTTGAATGTCCCA+TGG + chr8_3:13219634-13219653 None:intergenic 35.0%
TGCATTTCTCTACAAAGAAG+AGG + chr8_3:13219825-13219844 None:intergenic 35.0%
GAACAACTCCACAAAATGAT+TGG - chr8_3:13219851-13219870 Msa1277550:CDS 35.0%
TTGGATACTTCTTGTCTTTG+TGG + chr8_3:13219888-13219907 None:intergenic 35.0%
!! AAAGACAAGAAGTATCCAAC+CGG - chr8_3:13219889-13219908 Msa1277550:CDS 35.0%
! GCATGATCCAATCAGATTTT+TGG + chr8_3:13220047-13220066 None:intergenic 35.0%
CACAAGTATCATACAAGTGA+TGG + chr8_3:13220361-13220380 None:intergenic 35.0%
GGAGCAAATACTTCAACAAA+TGG - chr8_3:13220394-13220413 Msa1277550:intron 35.0%
ATACTTCAACAAATGGGAAG+GGG - chr8_3:13220401-13220420 Msa1277550:intron 35.0%
GAATCTACTCTCAACAACAA+TGG - chr8_3:13220488-13220507 Msa1277550:intron 35.0%
! GATTTTGGACTCTCTAAGTT+TGG + chr8_3:13220545-13220564 None:intergenic 35.0%
!!! TTCTCCATGCTTGTTGATTT+TGG + chr8_3:13220560-13220579 None:intergenic 35.0%
CTCTGATCATCATCATAACA+TGG - chr8_3:13220652-13220671 Msa1277550:CDS 35.0%
!! TGATGGTGGTCTTACTAATT+GGG - chr8_3:13220724-13220743 Msa1277550:CDS 35.0%
TCTTACTAATTGGGTAGCTT+TGG - chr8_3:13220733-13220752 Msa1277550:CDS 35.0%
! CTTGTTGCTTCTCAATTGAA+TGG - chr8_3:13220761-13220780 Msa1277550:CDS 35.0%
TCAATTGAATGGACAAACTG+AGG - chr8_3:13220772-13220791 Msa1277550:CDS 35.0%
TTAGTGCAATATCCCATTGT+GGG + chr8_3:13220827-13220846 None:intergenic 35.0%
ATTAGTGCAATATCCCATTG+TGG + chr8_3:13220828-13220847 None:intergenic 35.0%
! GATGATGATGATTTAAGGGT+GGG + chr8_3:13220869-13220888 None:intergenic 35.0%
! TGATGATGATGATTTAAGGG+TGG + chr8_3:13220870-13220889 None:intergenic 35.0%
GTACTGGAATGAGTATGTAA+AGG + chr8_3:13219288-13219307 None:intergenic 35.0%
AAAGGTGAAAGATAATGAGG+TGG + chr8_3:13219316-13219335 None:intergenic 35.0%
AGGAAAGGTGAAAGATAATG+AGG + chr8_3:13219319-13219338 None:intergenic 35.0%
TAGGAAAGAAAGGAAAGGAA+AGG + chr8_3:13219334-13219353 None:intergenic 35.0%
TCAAAACAGGTAGGAAAGAA+AGG + chr8_3:13219344-13219363 None:intergenic 35.0%
AGAACACATTCAAAACAGGT+AGG + chr8_3:13219353-13219372 None:intergenic 35.0%
TGAGAGAACACATTCAAAAC+AGG + chr8_3:13219357-13219376 None:intergenic 35.0%
!! TAGTGGTTCTAGATTCACAA+GGG + chr8_3:13219391-13219410 None:intergenic 35.0%
GTAGCAAAAGAAGATAAGCT+AGG + chr8_3:13219422-13219441 None:intergenic 35.0%
TTAAGGTAACTAAGAGAGAG+TGG + chr8_3:13219444-13219463 None:intergenic 35.0%
ACAGATATGCTCATGTTATC+AGG + chr8_3:13219469-13219488 None:intergenic 35.0%
AGCTTCTTCAATACTACTTG+AGG - chr8_3:13219542-13219561 Msa1277550:exon 35.0%
CAACATCACGAATAACATCA+AGG + chr8_3:13219594-13219613 None:intergenic 35.0%
ATATTACCTTGAATGTCCCA+TGG + chr8_3:13219634-13219653 None:intergenic 35.0%
TGCATTTCTCTACAAAGAAG+AGG + chr8_3:13219825-13219844 None:intergenic 35.0%
GAACAACTCCACAAAATGAT+TGG - chr8_3:13219851-13219870 Msa1277550:CDS 35.0%
TTGGATACTTCTTGTCTTTG+TGG + chr8_3:13219888-13219907 None:intergenic 35.0%
!! AAAGACAAGAAGTATCCAAC+CGG - chr8_3:13219889-13219908 Msa1277550:CDS 35.0%
! GCATGATCCAATCAGATTTT+TGG + chr8_3:13220047-13220066 None:intergenic 35.0%
CACAAGTATCATACAAGTGA+TGG + chr8_3:13220361-13220380 None:intergenic 35.0%
GGAGCAAATACTTCAACAAA+TGG - chr8_3:13220394-13220413 Msa1277550:intron 35.0%
ATACTTCAACAAATGGGAAG+GGG - chr8_3:13220401-13220420 Msa1277550:intron 35.0%
GAATCTACTCTCAACAACAA+TGG - chr8_3:13220488-13220507 Msa1277550:intron 35.0%
! GATTTTGGACTCTCTAAGTT+TGG + chr8_3:13220545-13220564 None:intergenic 35.0%
!!! TTCTCCATGCTTGTTGATTT+TGG + chr8_3:13220560-13220579 None:intergenic 35.0%
CTCTGATCATCATCATAACA+TGG - chr8_3:13220652-13220671 Msa1277550:CDS 35.0%
!! TGATGGTGGTCTTACTAATT+GGG - chr8_3:13220724-13220743 Msa1277550:CDS 35.0%
TCTTACTAATTGGGTAGCTT+TGG - chr8_3:13220733-13220752 Msa1277550:CDS 35.0%
! CTTGTTGCTTCTCAATTGAA+TGG - chr8_3:13220761-13220780 Msa1277550:CDS 35.0%
TCAATTGAATGGACAAACTG+AGG - chr8_3:13220772-13220791 Msa1277550:CDS 35.0%
TTAGTGCAATATCCCATTGT+GGG + chr8_3:13220827-13220846 None:intergenic 35.0%
ATTAGTGCAATATCCCATTG+TGG + chr8_3:13220828-13220847 None:intergenic 35.0%
! GATGATGATGATTTAAGGGT+GGG + chr8_3:13220869-13220888 None:intergenic 35.0%
! TGATGATGATGATTTAAGGG+TGG + chr8_3:13220870-13220889 None:intergenic 35.0%
ATATGTGTTGTGGGACAGAA+AGG + chr8_3:13219255-13219274 None:intergenic 40.0%
ACAGGTAGGAAAGAAAGGAA+AGG + chr8_3:13219339-13219358 None:intergenic 40.0%
!! GTAGTGGTTCTAGATTCACA+AGG + chr8_3:13219392-13219411 None:intergenic 40.0%
TAAGCTAGGTAGCTATGTAG+TGG + chr8_3:13219408-13219427 None:intergenic 40.0%
GCTCATGTTATCAGGCATTA+AGG + chr8_3:13219461-13219480 None:intergenic 40.0%
CTTCTTCAGTTGGATGAAAC+CGG + chr8_3:13219522-13219541 None:intergenic 40.0%
TGAAGAAGCTCTTCTTCAGT+TGG + chr8_3:13219532-13219551 None:intergenic 40.0%
ATCTCAACAAGCTTGAACCA+TGG - chr8_3:13219614-13219633 Msa1277550:CDS 40.0%
TCTCAACAAGCTTGAACCAT+GGG - chr8_3:13219615-13219634 Msa1277550:CDS 40.0%
!!! CAATCAGATTTTTGGCCATG+AGG + chr8_3:13220039-13220058 None:intergenic 40.0%
CTCATGGCCAAAAATCTGAT+TGG - chr8_3:13220037-13220056 Msa1277550:CDS 40.0%
!! ACTTACCAGATTGGTGTCAT+TGG + chr8_3:13220097-13220116 None:intergenic 40.0%
GTGTCGAATATGATTGGTGA+TGG - chr8_3:13220242-13220261 Msa1277550:CDS 40.0%
!! TCGAATATGATTGGTGATGG+TGG - chr8_3:13220245-13220264 Msa1277550:CDS 40.0%
TACTTGTGATGAAGGAGCTT+TGG - chr8_3:13220373-13220392 Msa1277550:CDS 40.0%
TCTACTCTCAACAACAATGG+TGG - chr8_3:13220491-13220510 Msa1277550:intron 40.0%
GAGTCCAAAATCAACAAGCA+TGG - chr8_3:13220553-13220572 Msa1277550:CDS 40.0%
! GATGATGATGATGCCTCTAA+TGG + chr8_3:13220686-13220705 None:intergenic 40.0%
!! AGAGGCATCATCATCATCAA+TGG - chr8_3:13220688-13220707 Msa1277550:CDS 40.0%
TCATCAATGGTGATAGCATG+TGG - chr8_3:13220701-13220720 Msa1277550:CDS 40.0%
!! GTGATGGTGGTCTTACTAAT+TGG - chr8_3:13220723-13220742 Msa1277550:CDS 40.0%
!! CTAATTGGGTAGCTTTGGAT+AGG - chr8_3:13220738-13220757 Msa1277550:CDS 40.0%
TTGCTTTAATGACCCCACAA+TGG - chr8_3:13220811-13220830 Msa1277550:intron 40.0%
TGCTTTAATGACCCCACAAT+GGG - chr8_3:13220812-13220831 Msa1277550:intron 40.0%
TAGTGCAATATCCCATTGTG+GGG + chr8_3:13220826-13220845 None:intergenic 40.0%
TTCAGAAGATGACAACAACG+AGG + chr8_3:13221026-13221045 None:intergenic 40.0%
ATATGTGTTGTGGGACAGAA+AGG + chr8_3:13219255-13219274 None:intergenic 40.0%
ACAGGTAGGAAAGAAAGGAA+AGG + chr8_3:13219339-13219358 None:intergenic 40.0%
!! GTAGTGGTTCTAGATTCACA+AGG + chr8_3:13219392-13219411 None:intergenic 40.0%
TAAGCTAGGTAGCTATGTAG+TGG + chr8_3:13219408-13219427 None:intergenic 40.0%
GCTCATGTTATCAGGCATTA+AGG + chr8_3:13219461-13219480 None:intergenic 40.0%
CTTCTTCAGTTGGATGAAAC+CGG + chr8_3:13219522-13219541 None:intergenic 40.0%
TGAAGAAGCTCTTCTTCAGT+TGG + chr8_3:13219532-13219551 None:intergenic 40.0%
ATCTCAACAAGCTTGAACCA+TGG - chr8_3:13219614-13219633 Msa1277550:CDS 40.0%
TCTCAACAAGCTTGAACCAT+GGG - chr8_3:13219615-13219634 Msa1277550:CDS 40.0%
!!! CAATCAGATTTTTGGCCATG+AGG + chr8_3:13220039-13220058 None:intergenic 40.0%
CTCATGGCCAAAAATCTGAT+TGG - chr8_3:13220037-13220056 Msa1277550:CDS 40.0%
!! ACTTACCAGATTGGTGTCAT+TGG + chr8_3:13220097-13220116 None:intergenic 40.0%
GTGTCGAATATGATTGGTGA+TGG - chr8_3:13220242-13220261 Msa1277550:CDS 40.0%
!! TCGAATATGATTGGTGATGG+TGG - chr8_3:13220245-13220264 Msa1277550:CDS 40.0%
TACTTGTGATGAAGGAGCTT+TGG - chr8_3:13220373-13220392 Msa1277550:CDS 40.0%
TCTACTCTCAACAACAATGG+TGG - chr8_3:13220491-13220510 Msa1277550:intron 40.0%
GAGTCCAAAATCAACAAGCA+TGG - chr8_3:13220553-13220572 Msa1277550:CDS 40.0%
! GATGATGATGATGCCTCTAA+TGG + chr8_3:13220686-13220705 None:intergenic 40.0%
!! AGAGGCATCATCATCATCAA+TGG - chr8_3:13220688-13220707 Msa1277550:CDS 40.0%
TCATCAATGGTGATAGCATG+TGG - chr8_3:13220701-13220720 Msa1277550:CDS 40.0%
!! GTGATGGTGGTCTTACTAAT+TGG - chr8_3:13220723-13220742 Msa1277550:CDS 40.0%
!! CTAATTGGGTAGCTTTGGAT+AGG - chr8_3:13220738-13220757 Msa1277550:CDS 40.0%
TTGCTTTAATGACCCCACAA+TGG - chr8_3:13220811-13220830 Msa1277550:intron 40.0%
TGCTTTAATGACCCCACAAT+GGG - chr8_3:13220812-13220831 Msa1277550:intron 40.0%
TAGTGCAATATCCCATTGTG+GGG + chr8_3:13220826-13220845 None:intergenic 40.0%
TTCAGAAGATGACAACAACG+AGG + chr8_3:13221026-13221045 None:intergenic 40.0%
TAATGAGGTGGTGTGTGTAC+TGG + chr8_3:13219304-13219323 None:intergenic 45.0%
CTTGAACCATGGGACATTCA+AGG - chr8_3:13219625-13219644 Msa1277550:CDS 45.0%
TATAACTTTGTCACGACCGG+TGG + chr8_3:13219956-13219975 None:intergenic 45.0%
!! TACCAGATTGGTGTCATTGG+TGG + chr8_3:13220094-13220113 None:intergenic 45.0%
ATGGTGGTCAAGAAGAAGGA+TGG - chr8_3:13220261-13220280 Msa1277550:CDS 45.0%
TGGTGGTCAAGAAGAAGGAT+GGG - chr8_3:13220262-13220281 Msa1277550:CDS 45.0%
TTCTTCTTCCCTCTCCAGAA+GGG + chr8_3:13220337-13220356 None:intergenic 45.0%
ATGGTGATAGCATGTGGTGA+TGG - chr8_3:13220707-13220726 Msa1277550:CDS 45.0%
ATGGACAAACTGAGGCTTCT+AGG - chr8_3:13220780-13220799 Msa1277550:intron 45.0%
AACTGAGGCTTCTAGGCAAT+TGG - chr8_3:13220787-13220806 Msa1277550:intron 45.0%
TCACTGGCATAGTCATGTGA+GGG + chr8_3:13220971-13220990 None:intergenic 45.0%
TTGATCGAGCAAAGTTCCAG+AGG + chr8_3:13221000-13221019 None:intergenic 45.0%
TAATGAGGTGGTGTGTGTAC+TGG + chr8_3:13219304-13219323 None:intergenic 45.0%
CTTGAACCATGGGACATTCA+AGG - chr8_3:13219625-13219644 Msa1277550:CDS 45.0%
TATAACTTTGTCACGACCGG+TGG + chr8_3:13219956-13219975 None:intergenic 45.0%
!! TACCAGATTGGTGTCATTGG+TGG + chr8_3:13220094-13220113 None:intergenic 45.0%
ATGGTGGTCAAGAAGAAGGA+TGG - chr8_3:13220261-13220280 Msa1277550:CDS 45.0%
TGGTGGTCAAGAAGAAGGAT+GGG - chr8_3:13220262-13220281 Msa1277550:CDS 45.0%
TTCTTCTTCCCTCTCCAGAA+GGG + chr8_3:13220337-13220356 None:intergenic 45.0%
ATGGTGATAGCATGTGGTGA+TGG - chr8_3:13220707-13220726 Msa1277550:CDS 45.0%
ATGGACAAACTGAGGCTTCT+AGG - chr8_3:13220780-13220799 Msa1277550:intron 45.0%
AACTGAGGCTTCTAGGCAAT+TGG - chr8_3:13220787-13220806 Msa1277550:intron 45.0%
TCACTGGCATAGTCATGTGA+GGG + chr8_3:13220971-13220990 None:intergenic 45.0%
TTGATCGAGCAAAGTTCCAG+AGG + chr8_3:13221000-13221019 None:intergenic 45.0%
GGACAATCTCAAGTTCCTCC+TGG - chr8_3:13219493-13219512 Msa1277550:three_prime_UTR 50.0%
CTCAAGTTCCTCCTGGATTC+CGG - chr8_3:13219500-13219519 Msa1277550:three_prime_UTR 50.0%
GTTGGATGAAACCGGAATCC+AGG + chr8_3:13219514-13219533 None:intergenic 50.0%
TACAAAGGTCGTGCTCCTCA+TGG - chr8_3:13220021-13220040 Msa1277550:CDS 50.0%
CACCACCAATGACACCAATC+TGG - chr8_3:13220089-13220108 Msa1277550:CDS 50.0%
!! GGTGATGGTGGTCAAGAAGA+AGG - chr8_3:13220257-13220276 Msa1277550:CDS 50.0%
TGGTCAAGAAGAAGGATGGG+TGG - chr8_3:13220265-13220284 Msa1277550:CDS 50.0%
AAGAAGGATGGGTGGTGTGT+AGG - chr8_3:13220273-13220292 Msa1277550:CDS 50.0%
AAAACCCTAGACAGCCCTTC+TGG - chr8_3:13220320-13220339 Msa1277550:CDS 50.0%
CTTCTTCTTCCCTCTCCAGA+AGG + chr8_3:13220338-13220357 None:intergenic 50.0%
ACAAATGGGAAGGGGTTGCA+AGG - chr8_3:13220409-13220428 Msa1277550:intron 50.0%
!! GTGATAGCATGTGGTGATGG+TGG - chr8_3:13220710-13220729 Msa1277550:CDS 50.0%
CTCACTGGCATAGTCATGTG+AGG + chr8_3:13220972-13220991 None:intergenic 50.0%
ATGCCAGTGAGATTGACCTC+TGG - chr8_3:13220981-13221000 Msa1277550:intron 50.0%
GTTCCAGAGGTCAATCTCAC+TGG + chr8_3:13220987-13221006 None:intergenic 50.0%
GTATTCGACACGTGACACAG+TGG + chr8_3:13221049-13221068 None:intergenic 50.0%
GGACAATCTCAAGTTCCTCC+TGG - chr8_3:13219493-13219512 Msa1277550:three_prime_UTR 50.0%
CTCAAGTTCCTCCTGGATTC+CGG - chr8_3:13219500-13219519 Msa1277550:three_prime_UTR 50.0%
GTTGGATGAAACCGGAATCC+AGG + chr8_3:13219514-13219533 None:intergenic 50.0%
TACAAAGGTCGTGCTCCTCA+TGG - chr8_3:13220021-13220040 Msa1277550:CDS 50.0%
CACCACCAATGACACCAATC+TGG - chr8_3:13220089-13220108 Msa1277550:CDS 50.0%
!! GGTGATGGTGGTCAAGAAGA+AGG - chr8_3:13220257-13220276 Msa1277550:CDS 50.0%
TGGTCAAGAAGAAGGATGGG+TGG - chr8_3:13220265-13220284 Msa1277550:CDS 50.0%
AAGAAGGATGGGTGGTGTGT+AGG - chr8_3:13220273-13220292 Msa1277550:CDS 50.0%
AAAACCCTAGACAGCCCTTC+TGG - chr8_3:13220320-13220339 Msa1277550:CDS 50.0%
CTTCTTCTTCCCTCTCCAGA+AGG + chr8_3:13220338-13220357 None:intergenic 50.0%
ACAAATGGGAAGGGGTTGCA+AGG - chr8_3:13220409-13220428 Msa1277550:intron 50.0%
!! GTGATAGCATGTGGTGATGG+TGG - chr8_3:13220710-13220729 Msa1277550:CDS 50.0%
CTCACTGGCATAGTCATGTG+AGG + chr8_3:13220972-13220991 None:intergenic 50.0%
ATGCCAGTGAGATTGACCTC+TGG - chr8_3:13220981-13221000 Msa1277550:intron 50.0%
GTTCCAGAGGTCAATCTCAC+TGG + chr8_3:13220987-13221006 None:intergenic 50.0%
GTATTCGACACGTGACACAG+TGG + chr8_3:13221049-13221068 None:intergenic 50.0%
GGATGAAACCGGAATCCAGG+AGG + chr8_3:13219511-13219530 None:intergenic 55.0%
!! CGATTGGTTCGTGTTCCGGT+TGG + chr8_3:13219907-13219926 None:intergenic 55.0%
!! AGCGCGATTGGTTCGTGTTC+CGG + chr8_3:13219911-13219930 None:intergenic 55.0%
CTCTCCAGAAGGGCTGTCTA+GGG + chr8_3:13220327-13220346 None:intergenic 55.0%
! CTAGACAGCCCTTCTGGAGA+GGG - chr8_3:13220326-13220345 Msa1277550:CDS 55.0%
GGATGAAACCGGAATCCAGG+AGG + chr8_3:13219511-13219530 None:intergenic 55.0%
!! CGATTGGTTCGTGTTCCGGT+TGG + chr8_3:13219907-13219926 None:intergenic 55.0%
!! AGCGCGATTGGTTCGTGTTC+CGG + chr8_3:13219911-13219930 None:intergenic 55.0%
CTCTCCAGAAGGGCTGTCTA+GGG + chr8_3:13220327-13220346 None:intergenic 55.0%
! CTAGACAGCCCTTCTGGAGA+GGG - chr8_3:13220326-13220345 Msa1277550:CDS 55.0%
GGTGGCTTTCCAGAACCCTG+CGG + chr8_3:13219938-13219957 None:intergenic 60.0%
!! GCAGGGTTCTGGAAAGCCAC+CGG - chr8_3:13219937-13219956 Msa1277550:CDS 60.0%
CCTCTCCAGAAGGGCTGTCT+AGG + chr8_3:13220328-13220347 None:intergenic 60.0%
! CCTAGACAGCCCTTCTGGAG+AGG - chr8_3:13220325-13220344 Msa1277550:CDS 60.0%
GGTGGCTTTCCAGAACCCTG+CGG + chr8_3:13219938-13219957 None:intergenic 60.0%
!! GCAGGGTTCTGGAAAGCCAC+CGG - chr8_3:13219937-13219956 Msa1277550:CDS 60.0%
CCTCTCCAGAAGGGCTGTCT+AGG + chr8_3:13220328-13220347 None:intergenic 60.0%
! CCTAGACAGCCCTTCTGGAG+AGG - chr8_3:13220325-13220344 Msa1277550:CDS 60.0%
ACCAATCGCGCTACAGCCGC+AGG - chr8_3:13219919-13219938 Msa1277550:CDS 65.0%
CCAATCGCGCTACAGCCGCA+GGG - chr8_3:13219920-13219939 Msa1277550:CDS 65.0%
ACCAATCGCGCTACAGCCGC+AGG - chr8_3:13219919-13219938 Msa1277550:CDS 65.0%
CCAATCGCGCTACAGCCGCA+GGG - chr8_3:13219920-13219939 Msa1277550:CDS 65.0%
CCCTGCGGCTGTAGCGCGAT+TGG + chr8_3:13219923-13219942 None:intergenic 70.0%
GCGCTACAGCCGCAGGGTTC+TGG - chr8_3:13219926-13219945 Msa1277550:CDS 70.0%
CCCTGCGGCTGTAGCGCGAT+TGG + chr8_3:13219923-13219942 None:intergenic 70.0%
GCGCTACAGCCGCAGGGTTC+TGG - chr8_3:13219926-13219945 Msa1277550:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 13219251 13221383 13219251 ID=Msa1277550;Name=Msa1277550
chr8_3 mRNA 13219251 13221383 13219251 ID=Msa1277550-mRNA-1;Parent=Msa1277550;Name=Msa1277550-mRNA-1;_AED=0.06;_eAED=0.06;_QI=212|1|1|1|1|1|3|305|431
chr8_3 exon 13219251 13220392 13219251 ID=Msa1277550-mRNA-1:exon:5216;Parent=Msa1277550-mRNA-1
chr8_3 exon 13220524 13220798 13220524 ID=Msa1277550-mRNA-1:exon:5215;Parent=Msa1277550-mRNA-1
chr8_3 exon 13220988 13221383 13220988 ID=Msa1277550-mRNA-1:exon:5214;Parent=Msa1277550-mRNA-1
chr8_3 five_prime_UTR 13221172 13221383 13221172 ID=Msa1277550-mRNA-1:five_prime_utr;Parent=Msa1277550-mRNA-1
chr8_3 CDS 13220988 13221171 13220988 ID=Msa1277550-mRNA-1:cds;Parent=Msa1277550-mRNA-1
chr8_3 CDS 13220524 13220798 13220524 ID=Msa1277550-mRNA-1:cds;Parent=Msa1277550-mRNA-1
chr8_3 CDS 13219556 13220392 13219556 ID=Msa1277550-mRNA-1:cds;Parent=Msa1277550-mRNA-1
chr8_3 three_prime_UTR 13219251 13219555 13219251 ID=Msa1277550-mRNA-1:three_prime_utr;Parent=Msa1277550-mRNA-1
Gene Sequence

>Msa1277550

ATGCCTGATAACATGAGCATATCTGTTAATGGACAATCTCAAGTTCCTCCTGGATTCCGGTTTCATCCAACTGAAGAAGAGCTTCTTCAATACTACTTGAGGAAAAAAGTCTCTTACGAGAAGATTGACCTTGATGTTATTCGTGATGTTGATCTCAACAAGCTTGAACCATGGGACATTCAAGAGAAATGCAAAATAGGAACAACTCCACAAAATGATTGGTACTTCTTCAGCCACAAAGACAAGAAGTATCCAACCGGAACACGAACCAATCGCGCTACAGCCGCAGGGTTCTGGAAAGCCACCGGTCGTGACAAAGTTATATATAGCAATGGAAAAAGGATTGGAATGAGAAAGACTCTTGTTTTCTACAAAGGTCGTGCTCCTCATGGCCAAAAATCTGATTGGATCATGCATGAGTATAGACTCGACGATAACACCACCAATGACACCAATCTGGTGTCGAATATGATTGGTGATGGTGGTCAAGAAGAAGGATGGGTGGTGTGTAGGATATTCAAGAAGAAGAATCATCTCAAAACCCTAGACAGCCCTTCTGGAGAGGGAAGAAGAAGCCATCACTTGTATGATACTTGTGATGAAGGAGCTTTGGAGCAAATACTTCAACAAATGGGAAGGGGTTGCAAGGAAGAGAATTATGAAGCAAATTACAATAATAATTATGGAAGGTTTGCAAGGCCTTTTGAATCTACTCTCAACAACAATGGTGGTTATAATAATGAAAGGTTCATGAAACTTCCAAACTTAGAGAGTCCAAAATCAACAAGCATGGAGAACAATGAGAACAACAATGATGGGTACCATGCAATTATTCAAGTAGATATGGCTAATGAAAATGAAGGGTCATTCTCTGATCATCATCATAACATGGTTAATAATCCATTAGAGGCATCATCATCATCAATGGTGATAGCATGTGGTGATGGTGGTCTTACTAATTGGGTAGCTTTGGATAGGCTTGTTGCTTCTCAATTGAATGGACAAACTGAGGCTTCTAGGCAATTGGCTTGCTTTAATGACCCCACAATGGGATATTGCACTAATGATCAAGATCTTCAACTTCCCACCCTTAAATCATCATCATCAACTTCATCACTATCAACACAAGTCAGAGCTACTACTACTACTACTTCTACTACTACTACAGCTACTACTTACATTAGTCCCTCACATGACTATGCCAGTGAGATTGACCTCTGGAACTTTGCTCGATCAACTTCCTCGTTGTTGTCATCTTCTGAACCACTGTGTCACGTGTCGAATACGTCAGTGTGA
Protein sequence

>Msa1277550

MPDNMSISVNGQSQVPPGFRFHPTEEELLQYYLRKKVSYEKIDLDVIRDVDLNKLEPWDIQEKCKIGTTPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKVIYSNGKRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDDNTTNDTNLVSNMIGDGGQEEGWVVCRIFKKKNHLKTLDSPSGEGRRSHHLYDTCDEGALEQILQQMGRGCKEENYEANYNNNYGRFARPFESTLNNNGGYNNERFMKLPNLESPKSTSMENNENNNDGYHAIIQVDMANENEGSFSDHHHNMVNNPLEASSSSMVIACGDGGLTNWVALDRLVASQLNGQTEASRQLACFNDPTMGYCTNDQDLQLPTLKSSSSTSSLSTQVRATTTTTSTTTTATTYISPSHDYASEIDLWNFARSTSSLLSSSEPLCHVSNTSV*