Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1177040 | XP_013444710.1 | 97.971 | 345 | 7 | 0 | 1 | 345 | 1 | 345 | 0.0 | 708 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1177040 | sp|Q8LB01|DAPB2_ARATH | 68.000 | 350 | 106 | 2 | 1 | 345 | 1 | 349 | 5.51e-173 | 487 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0687460 | Msa1177040 | 0.816486 | 5.395281e-52 | -8.615850e-47 |
| Msa1177040 | Msa1278140 | 0.809073 | 2.265681e-50 | -8.615850e-47 |
| Msa0552710 | Msa1177040 | 0.805059 | 1.602746e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1177040 | MtrunA17_Chr8g0347731 | 97.971 | 345 | 7 | 0 | 1 | 345 | 1 | 345 | 0.0 | 708 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1177040 | AT3G59890.1 | 68.000 | 350 | 106 | 2 | 1 | 345 | 1 | 349 | 5.60e-174 | 487 |
| Msa1177040 | AT3G59890.2 | 69.006 | 342 | 100 | 2 | 9 | 345 | 3 | 343 | 1.08e-173 | 486 |
| Msa1177040 | AT2G44040.1 | 67.227 | 357 | 95 | 5 | 1 | 345 | 1 | 347 | 3.17e-170 | 478 |
Find 94 sgRNAs with CRISPR-Local
Find 440 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAGAGATTGAGGTGAATT+TGG | 0.137916 | 8_1:+9376513 | None:intergenic |
| TTGGGTAATTTATGAATAAT+TGG | 0.161308 | 8_1:+9369954 | None:intergenic |
| TACCATTTCGACTTGTTGCC+TGG | 0.213364 | 8_1:+9370956 | None:intergenic |
| CTTCTCTGGGTATTCCTTAC+AGG | 0.223156 | 8_1:-9372836 | Msa1177040:intron |
| TTATAGATAATCACCATTAT+TGG | 0.228681 | 8_1:+9376264 | None:intergenic |
| TCTTGCAGCTATGGAAATTA+TGG | 0.252282 | 8_1:-9372878 | Msa1177040:CDS |
| TGAGAGATTGAGGTGAATTT+GGG | 0.259802 | 8_1:+9376514 | None:intergenic |
| ACTTGGGGCTTCTTTCGATA+TGG | 0.265727 | 8_1:-9371220 | Msa1177040:CDS |
| TAGTCCACAATAATCAAATT+TGG | 0.277216 | 8_1:+9373536 | None:intergenic |
| CAATTTCCTGGAGCCTTCTC+TGG | 0.294254 | 8_1:-9372850 | Msa1177040:CDS |
| CGATCTCCTCTTCTGAGAAA+TGG | 0.323741 | 8_1:+9376377 | None:intergenic |
| TCTCCTTGTAGTGGTGCTAT+TGG | 0.326086 | 8_1:+9376407 | None:intergenic |
| AAACACTGCACTTCCAATAA+TGG | 0.343176 | 8_1:-9376277 | Msa1177040:intron |
| ACTCACAATAGCACATATTA+TGG | 0.344631 | 8_1:+9370072 | None:intergenic |
| TTACCTGCTTTCCCATTTGC+GGG | 0.354090 | 8_1:+9373002 | None:intergenic |
| GATCTCCTCTTCTGAGAAAT+GGG | 0.362575 | 8_1:+9376378 | None:intergenic |
| AAGAAAAGTTTGAACATTTG+TGG | 0.363684 | 8_1:+9376323 | None:intergenic |
| AATGTTGTTCCTGTGTCGTT+TGG | 0.366545 | 8_1:-9373665 | Msa1177040:CDS |
| CCCTTTGTGATGGGGACAAC+CGG | 0.374904 | 8_1:-9373085 | Msa1177040:CDS |
| ATGAGATAAACATTTCTATA+TGG | 0.376062 | 8_1:-9370213 | Msa1177040:exon |
| TGACCCGACAAATGCTCCTC+TGG | 0.383624 | 8_1:+9370927 | None:intergenic |
| ATTATGGCAGAGCAATTTCC+TGG | 0.383988 | 8_1:-9372862 | Msa1177040:CDS |
| TGTTCTATTTCTTGCTAAGA+AGG | 0.385935 | 8_1:-9370686 | Msa1177040:intron |
| AATCATATTGTATATTCTCT+TGG | 0.393445 | 8_1:+9370257 | None:intergenic |
| GTTAATTCTTACGTTTCATC+TGG | 0.393981 | 8_1:+9370876 | None:intergenic |
| TGCTGTGATATCCCCGCAAA+TGG | 0.399143 | 8_1:-9373014 | Msa1177040:CDS |
| TCAAATTTGGATATTTATCA+AGG | 0.401787 | 8_1:+9373549 | None:intergenic |
| GAGAGAGATTTGAGAGATTG+AGG | 0.404001 | 8_1:+9376504 | None:intergenic |
| ATATCTTGCTTCAATAAACT+TGG | 0.407904 | 8_1:-9371237 | Msa1177040:CDS |
| GCAAGCAAAGTTGATGCATC+TGG | 0.411752 | 8_1:-9371276 | Msa1177040:CDS |
| TGGGGACAACCGGCGGAGAT+AGG | 0.412259 | 8_1:-9373075 | Msa1177040:CDS |
| ATCATATTGTATATTCTCTT+GGG | 0.422305 | 8_1:+9370258 | None:intergenic |
| GAATTCCAACATAATGTTTG+TGG | 0.424124 | 8_1:-9370742 | Msa1177040:CDS |
| TCAGAAGAGGAGATCGCGTT+TGG | 0.424808 | 8_1:-9376370 | Msa1177040:CDS |
| TTTACCTGCTTTCCCATTTG+CGG | 0.426927 | 8_1:+9373001 | None:intergenic |
| GTCGGGGTACCCTTTGTGAT+GGG | 0.439769 | 8_1:-9373094 | Msa1177040:CDS |
| AGAAGAATGAGAGGTTGTTT+TGG | 0.447316 | 8_1:+9376430 | None:intergenic |
| ATATCCAAATTTGATTATTG+TGG | 0.449203 | 8_1:-9373540 | Msa1177040:CDS |
| ATGTTGTTCCTGTGTCGTTT+GGG | 0.451322 | 8_1:-9373664 | Msa1177040:CDS |
| GCTTAGGTTAACGCATGTAC+TGG | 0.465662 | 8_1:-9373734 | Msa1177040:intron |
| GTCCCAGAGGAGCATTTGTC+GGG | 0.467070 | 8_1:-9370930 | Msa1177040:CDS |
| ACCATTTCGACTTGTTGCCT+GGG | 0.469679 | 8_1:+9370957 | None:intergenic |
| GTGAGTTATACAGTAAGGTC+GGG | 0.470899 | 8_1:-9373111 | Msa1177040:CDS |
| TATCTTGCTTCAATAAACTT+GGG | 0.480880 | 8_1:-9371236 | Msa1177040:CDS |
| CCCCAGGCAACAAGTCGAAA+TGG | 0.485469 | 8_1:-9370958 | Msa1177040:CDS |
| ATTAATGCAGCAGAAGCTGC+TGG | 0.488529 | 8_1:-9373692 | Msa1177040:CDS |
| GGGGACAACCGGCGGAGATA+GGG | 0.489339 | 8_1:-9373074 | Msa1177040:CDS |
| ATCTACCACAAACATTATGT+TGG | 0.494128 | 8_1:+9370737 | None:intergenic |
| ATTTCCCCATTTCTCAGAAG+AGG | 0.496533 | 8_1:-9376383 | Msa1177040:CDS |
| GAATACCCAGAGAAGGCTCC+AGG | 0.497351 | 8_1:+9372844 | None:intergenic |
| TGCATACCATTGACTGCATC+TGG | 0.498611 | 8_1:+9373506 | None:intergenic |
| AATTTCCTGGAGCCTTCTCT+GGG | 0.507424 | 8_1:-9372849 | Msa1177040:CDS |
| AATCGTCAAGCAACTTCTAC+AGG | 0.510119 | 8_1:+9370171 | None:intergenic |
| GGCTTCTTTCGATATGGACC+AGG | 0.513596 | 8_1:-9371214 | Msa1177040:intron |
| ATCCCCGCAAATGGGAAAGC+AGG | 0.517931 | 8_1:-9373005 | Msa1177040:intron |
| ATCTTGCTTCAATAAACTTG+GGG | 0.519238 | 8_1:-9371235 | Msa1177040:CDS |
| ATTTGGATATTTATCAAGGA+CGG | 0.533729 | 8_1:+9373553 | None:intergenic |
| ACAGACCTCAAAAGTCTGTC+CGG | 0.534841 | 8_1:+9373628 | None:intergenic |
| AGAAAACTCTCTCTGTCAGA+TGG | 0.543334 | 8_1:+9373581 | None:intergenic |
| GGTCGGGGTACCCTTTGTGA+TGG | 0.545148 | 8_1:-9373095 | Msa1177040:CDS |
| AGTCCCAGAGGAGCATTTGT+CGG | 0.545957 | 8_1:-9370931 | Msa1177040:CDS |
| CCGGTTGTCCCCATCACAAA+GGG | 0.547016 | 8_1:+9373085 | None:intergenic |
| GAAGCAAGATATCACAGCCT+TGG | 0.548326 | 8_1:+9371248 | None:intergenic |
| GGTGAGTTATACAGTAAGGT+CGG | 0.557351 | 8_1:-9373112 | Msa1177040:CDS |
| GACCCGACAAATGCTCCTCT+GGG | 0.560421 | 8_1:+9370928 | None:intergenic |
| CAGCAAAAGAGATACCTGTA+AGG | 0.561425 | 8_1:+9372822 | None:intergenic |
| CAATGGTGAGTTATACAGTA+AGG | 0.569413 | 8_1:-9373116 | Msa1177040:CDS |
| GCTGTGATATCCCCGCAAAT+GGG | 0.570041 | 8_1:-9373013 | Msa1177040:CDS |
| ACAGTACCAGATGCAGTCAA+TGG | 0.572451 | 8_1:-9373512 | Msa1177040:intron |
| TTTGGGTGTGAAGAAGAGTC+CGG | 0.576855 | 8_1:-9373647 | Msa1177040:CDS |
| TCGGGGTACCCTTTGTGATG+GGG | 0.584412 | 8_1:-9373093 | Msa1177040:CDS |
| CAACAAGTCCCTATCTCCGC+CGG | 0.589233 | 8_1:+9373066 | None:intergenic |
| TACAATTGATCAGAGACCCC+AGG | 0.590623 | 8_1:-9370974 | Msa1177040:CDS |
| TCTCCAATAGCACCACTACA+AGG | 0.592360 | 8_1:-9376410 | Msa1177040:CDS |
| GGAAGGGAGTTCCTTGTGCA+TGG | 0.593344 | 8_1:-9373605 | Msa1177040:CDS |
| GGGGAAATTTCTCCTTGTAG+TGG | 0.595857 | 8_1:+9376398 | None:intergenic |
| CCATTTCGACTTGTTGCCTG+GGG | 0.598515 | 8_1:+9370958 | None:intergenic |
| TCTTCACACCCAAACGACAC+AGG | 0.607474 | 8_1:+9373656 | None:intergenic |
| AGAGATTGAGGTGAATTTGG+GGG | 0.607506 | 8_1:+9376516 | None:intergenic |
| GAGAGATTGAGGTGAATTTG+GGG | 0.612301 | 8_1:+9376515 | None:intergenic |
| ATGTATGCAGATCGAAGCAA+AGG | 0.616083 | 8_1:-9370283 | Msa1177040:intron |
| TGATGCATCTGGAACTGCCA+AGG | 0.621113 | 8_1:-9371265 | Msa1177040:CDS |
| GCCGGTTGTCCCCATCACAA+AGG | 0.624380 | 8_1:+9373084 | None:intergenic |
| AGGCAACAAGTCGAAATGGT+AGG | 0.629458 | 8_1:-9370954 | Msa1177040:CDS |
| TGTCAGATGGACCATGCACA+AGG | 0.634115 | 8_1:+9373594 | None:intergenic |
| CTGTAAGGAATACCCAGAGA+AGG | 0.641673 | 8_1:+9372837 | None:intergenic |
| TACCTGCTTTCCCATTTGCG+GGG | 0.642628 | 8_1:+9373003 | None:intergenic |
| TGGTAGATCAATATACGCTG+AGG | 0.646190 | 8_1:-9370722 | Msa1177040:CDS |
| ATCTCCTCTTCTGAGAAATG+GGG | 0.652504 | 8_1:+9376379 | None:intergenic |
| TGAGTTATACAGTAAGGTCG+GGG | 0.668780 | 8_1:-9373110 | Msa1177040:CDS |
| GGTAGATCAATATACGCTGA+GGG | 0.671650 | 8_1:-9370721 | Msa1177040:CDS |
| CGAAATGGTAGGAGTCCCAG+AGG | 0.678536 | 8_1:-9370943 | Msa1177040:CDS |
| TGCTATTGGAGAAGAATGAG+AGG | 0.692685 | 8_1:+9376421 | None:intergenic |
| TTTGTGATGGGGACAACCGG+CGG | 0.696523 | 8_1:-9373082 | Msa1177040:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCATATTTCAAAAAAATATT+CGG | + | chr8_1:9371507-9371526 | None:intergenic | 10.0% |
| !! | GATAAAATGAATTAAAAATT+AGG | + | chr8_1:9372606-9372625 | None:intergenic | 10.0% |
| !!! | ACTTTTAATTTTTTTTGATT+TGG | - | chr8_1:9373299-9373318 | Msa1177040:intron | 10.0% |
| !!! | CTTTTAATTTTTTTTGATTT+GGG | - | chr8_1:9373300-9373319 | Msa1177040:intron | 10.0% |
| !!! | TTATTTTATGAAGATTTTAA+CGG | - | chr8_1:9373330-9373349 | Msa1177040:intron | 10.0% |
| !!! | TAAAAAAACACTTTAAAAAA+AGG | + | chr8_1:9374319-9374338 | None:intergenic | 10.0% |
| !!! | ATCGTTTTTTTTAAAATTAG+AGG | - | chr8_1:9371563-9371582 | Msa1177040:intron | 15.0% |
| !!! | TCGTTTTTTTTAAAATTAGA+GGG | - | chr8_1:9371564-9371583 | Msa1177040:intron | 15.0% |
| !!! | TTTAATTCATTTTATCTGTT+TGG | - | chr8_1:9372610-9372629 | Msa1177040:intron | 15.0% |
| !!! | GTAAATTTTTTTTACACTTT+TGG | - | chr8_1:9376053-9376072 | Msa1177040:intron | 15.0% |
| !! | TTATAGATAATCACCATTAT+TGG | + | chr8_1:9370235-9370254 | None:intergenic | 20.0% |
| !!! | AGAACACTGTTTTTATAAAT+TGG | - | chr8_1:9370331-9370350 | Msa1177040:intron | 20.0% |
| !!! | TACAGAAAGTATAAGATATA+TGG | + | chr8_1:9370562-9370581 | None:intergenic | 20.0% |
| !! | TAAAACAGATACATAACATA+GGG | + | chr8_1:9370599-9370618 | None:intergenic | 20.0% |
| !! | TTAAAACAGATACATAACAT+AGG | + | chr8_1:9370600-9370619 | None:intergenic | 20.0% |
| !! | TAGAAACATAAACATAGTTA+AGG | + | chr8_1:9370644-9370663 | None:intergenic | 20.0% |
| !!! | TATCCACTTCATTATTTTTA+AGG | - | chr8_1:9370891-9370910 | Msa1177040:CDS | 20.0% |
| !!! | ATCCACTTCATTATTTTTAA+GGG | - | chr8_1:9370892-9370911 | Msa1177040:CDS | 20.0% |
| !!! | CGTTTTTTTTAAAATTAGAG+GGG | - | chr8_1:9371565-9371584 | Msa1177040:intron | 20.0% |
| !! | TCAAATTTGGATATTTATCA+AGG | + | chr8_1:9372950-9372969 | None:intergenic | 20.0% |
| !! | ATATCCAAATTTGATTATTG+TGG | - | chr8_1:9372956-9372975 | Msa1177040:intron | 20.0% |
| !!! | ATTTTTTTTGATTTGGGATT+AGG | - | chr8_1:9373306-9373325 | Msa1177040:intron | 20.0% |
| !! | GAATGTTATGACAAAAAATA+AGG | + | chr8_1:9373927-9373946 | None:intergenic | 20.0% |
| !!! | CATGATAATTTTACTCAAAT+TGG | - | chr8_1:9373972-9373991 | Msa1177040:intron | 20.0% |
| !!! | AATAAATATTTTCTCTGAGT+TGG | + | chr8_1:9374137-9374156 | None:intergenic | 20.0% |
| !! | AAATGATAAATTAATGCTTG+TGG | - | chr8_1:9374341-9374360 | Msa1177040:intron | 20.0% |
| !!! | ATATTGAAATTTTGTTGTTG+TGG | - | chr8_1:9374711-9374730 | Msa1177040:intron | 20.0% |
| !! | GTAATTTGAAAGAAAAATTG+TGG | - | chr8_1:9374886-9374905 | Msa1177040:intron | 20.0% |
| !!! | TGAATCTTTTACAATACTTT+TGG | + | chr8_1:9374946-9374965 | None:intergenic | 20.0% |
| !! | TCAAACTGAAGATTTAATAA+AGG | + | chr8_1:9375143-9375162 | None:intergenic | 20.0% |
| !! | TAGAAAGTGAAAAATGTTAT+TGG | - | chr8_1:9376022-9376041 | Msa1177040:intron | 20.0% |
| !! | ATCATATTGTATATTCTCTT+GGG | + | chr8_1:9376241-9376260 | None:intergenic | 20.0% |
| !! | AATCATATTGTATATTCTCT+TGG | + | chr8_1:9376242-9376261 | None:intergenic | 20.0% |
| !! | ATGAGATAAACATTTCTATA+TGG | - | chr8_1:9376283-9376302 | Msa1177040:CDS | 20.0% |
| !! | AAATAAATAGACACGAAAAA+TGG | + | chr8_1:9376383-9376402 | None:intergenic | 20.0% |
| !!! | ATAAATCAAAATTGCTTTTG+AGG | + | chr8_1:9376512-9376531 | None:intergenic | 20.0% |
| ! | AAGAAAAGTTTGAACATTTG+TGG | + | chr8_1:9370176-9370195 | None:intergenic | 25.0% |
| ! | TCAAACTAATTTCACAACTT+GGG | + | chr8_1:9370292-9370311 | None:intergenic | 25.0% |
| ! | ATCAAACTAATTTCACAACT+TGG | + | chr8_1:9370293-9370312 | None:intergenic | 25.0% |
| !!! | TTTATAAATTGGACTAGTGA+TGG | - | chr8_1:9370342-9370361 | Msa1177040:intron | 25.0% |
| ! | ATCTTGATGTTTACTAAAGT+TGG | - | chr8_1:9370376-9370395 | Msa1177040:intron | 25.0% |
| ! | TTATTTCGTGATACACTATA+TGG | + | chr8_1:9370772-9370791 | None:intergenic | 25.0% |
| ! | TGAAGTGGATAAAATCTTAA+GGG | + | chr8_1:9370882-9370901 | None:intergenic | 25.0% |
| ! | ATGAAGTGGATAAAATCTTA+AGG | + | chr8_1:9370883-9370902 | None:intergenic | 25.0% |
| !!! | TCCACTTCATTATTTTTAAG+GGG | - | chr8_1:9370893-9370912 | Msa1177040:CDS | 25.0% |
| ! | ATTTAAAGAGATCTCAAAAG+AGG | + | chr8_1:9370932-9370951 | None:intergenic | 25.0% |
| !! | TGTTGAGTGTTATTATTAGA+GGG | - | chr8_1:9371588-9371607 | Msa1177040:intron | 25.0% |
| ! | AAACCATAATCAATTTGAGT+TGG | + | chr8_1:9372078-9372097 | None:intergenic | 25.0% |
| ! | AGAGATTAAGATTGAATTTG+AGG | - | chr8_1:9372178-9372197 | Msa1177040:intron | 25.0% |
| ! | CAATTTCCATTCATAAGAAT+AGG | + | chr8_1:9372496-9372515 | None:intergenic | 25.0% |
| ! | ATTAGGGAAAATTACATTGA+CGG | + | chr8_1:9372589-9372608 | None:intergenic | 25.0% |
| !!! | GTTTTTTGTTTATTCTGCTT+AGG | - | chr8_1:9372746-9372765 | Msa1177040:intron | 25.0% |
| ! | ATTTGGATATTTATCAAGGA+CGG | + | chr8_1:9372946-9372965 | None:intergenic | 25.0% |
| ! | TAGTCCACAATAATCAAATT+TGG | + | chr8_1:9372963-9372982 | None:intergenic | 25.0% |
| !!! | GAAGCATTTTTTCTTATCAT+TGG | - | chr8_1:9373023-9373042 | Msa1177040:CDS | 25.0% |
| ! | TACGAAATCTTATATGTATG+TGG | - | chr8_1:9373098-9373117 | Msa1177040:CDS | 25.0% |
| ! | TATAGATCATGTCCAATTAT+AGG | - | chr8_1:9373728-9373747 | Msa1177040:CDS | 25.0% |
| ! | AAATTTCAATGGCCTATAAT+TGG | + | chr8_1:9373743-9373762 | None:intergenic | 25.0% |
| ! | AAGAGAGATTCAAATTTCAA+TGG | + | chr8_1:9373754-9373773 | None:intergenic | 25.0% |
| ! | AGAAACACAGATGAATAAAT+GGG | - | chr8_1:9374050-9374069 | Msa1177040:intron | 25.0% |
| ! | GGGTGTATTATTAATGATAA+AGG | - | chr8_1:9374077-9374096 | Msa1177040:intron | 25.0% |
| ! | CAGAGAAAATATTTATTCTC+TGG | - | chr8_1:9374140-9374159 | Msa1177040:intron | 25.0% |
| ! | TGATGGGATTAATTATGTTA+GGG | + | chr8_1:9374166-9374185 | None:intergenic | 25.0% |
| !! | ATGATGGGATTAATTATGTT+AGG | + | chr8_1:9374167-9374186 | None:intergenic | 25.0% |
| !! | AACTAATTTTCGTATATGTC+CGG | + | chr8_1:9374564-9374583 | None:intergenic | 25.0% |
| ! | ATACAATACTATCTTGTGTA+AGG | + | chr8_1:9374972-9374991 | None:intergenic | 25.0% |
| !!! | GTGATTGGTATATTTTTATC+TGG | - | chr8_1:9375013-9375032 | Msa1177040:intron | 25.0% |
| !!! | ATATTTTTATCTGGTTTCAG+AGG | - | chr8_1:9375022-9375041 | Msa1177040:intron | 25.0% |
| !!! | TATTTTTATCTGGTTTCAGA+GGG | - | chr8_1:9375023-9375042 | Msa1177040:intron | 25.0% |
| ! | ATAGTTAAACTGTTTCATGT+TGG | - | chr8_1:9375068-9375087 | Msa1177040:intron | 25.0% |
| !!! | CATAAGTTCTTCAGTTTTAT+TGG | - | chr8_1:9375110-9375129 | Msa1177040:intron | 25.0% |
| ! | ATATCTTGCTTCAATAAACT+TGG | - | chr8_1:9375259-9375278 | Msa1177040:intron | 25.0% |
| ! | TATCTTGCTTCAATAAACTT+GGG | - | chr8_1:9375260-9375279 | Msa1177040:intron | 25.0% |
| ! | TACACATTACTCAGAAAAAT+GGG | + | chr8_1:9375377-9375396 | None:intergenic | 25.0% |
| ! | ATACACATTACTCAGAAAAA+TGG | + | chr8_1:9375378-9375397 | None:intergenic | 25.0% |
| !! | TAATGTGTATGATTTTATGC+TGG | - | chr8_1:9375388-9375407 | Msa1177040:intron | 25.0% |
| ! | ACAAAATTCATTGGAAAGAA+GGG | + | chr8_1:9375498-9375517 | None:intergenic | 25.0% |
| ! | TTGTATCTGACAAAATTCAT+TGG | + | chr8_1:9375507-9375526 | None:intergenic | 25.0% |
| !! | TTTTCTTCTCTTGTTCTTTT+AGG | - | chr8_1:9375650-9375669 | Msa1177040:intron | 25.0% |
| ! | AACAAAATGACATCATTAAC+TGG | + | chr8_1:9375970-9375989 | None:intergenic | 25.0% |
| ! | TTTCACTTTCTAGATATTTG+TGG | + | chr8_1:9376014-9376033 | None:intergenic | 25.0% |
| !! | CTTGATAGCATTATAATTAC+AGG | + | chr8_1:9376099-9376118 | None:intergenic | 25.0% |
| ! | TTATAATGCTATCAAGAAGA+TGG | - | chr8_1:9376103-9376122 | Msa1177040:intron | 25.0% |
| ! | TTTGAATCAGAAACAGTATA+AGG | + | chr8_1:9376184-9376203 | None:intergenic | 25.0% |
| !! | TTTTCGTGTCTATTTATTTG+AGG | - | chr8_1:9376384-9376403 | Msa1177040:CDS | 25.0% |
| !! | GATACAAAAACACTTAGTTT+TGG | + | chr8_1:9376453-9376472 | None:intergenic | 25.0% |
| TGTTTACTAAAGTTGGACTT+AGG | - | chr8_1:9370383-9370402 | Msa1177040:intron | 30.0% | |
| GTTTACTAAAGTTGGACTTA+GGG | - | chr8_1:9370384-9370403 | Msa1177040:intron | 30.0% | |
| TGAACCTATAAGCAGTATAA+GGG | + | chr8_1:9370493-9370512 | None:intergenic | 30.0% | |
| ACATAACATAGGGAATTGTA+TGG | + | chr8_1:9370589-9370608 | None:intergenic | 30.0% | |
| CACAAAACATTGTCAAATAG+CGG | + | chr8_1:9370749-9370768 | None:intergenic | 30.0% | |
| !!! | CCACTTCATTATTTTTAAGG+GGG | - | chr8_1:9370894-9370913 | Msa1177040:CDS | 30.0% |
| !!! | CACTTCATTATTTTTAAGGG+GGG | - | chr8_1:9370895-9370914 | Msa1177040:CDS | 30.0% |
| ATCAACTTTCATATGAGTAC+TGG | + | chr8_1:9371142-9371161 | None:intergenic | 30.0% | |
| ! | TGATTAGTGCTACTAAACAT+TGG | + | chr8_1:9371173-9371192 | None:intergenic | 30.0% |
| ! | ATGACAGCTAGATTTTTATC+TGG | + | chr8_1:9371215-9371234 | None:intergenic | 30.0% |
| TGACCATTTATGTGAAAGAA+TGG | + | chr8_1:9371279-9371298 | None:intergenic | 30.0% | |
| ACATAAGAGATGAGCAATTA+TGG | + | chr8_1:9371363-9371382 | None:intergenic | 30.0% | |
| ATAATTGCTCATCTCTTATG+TGG | - | chr8_1:9371362-9371381 | Msa1177040:intron | 30.0% | |
| ! | GTGTTGAGTGTTATTATTAG+AGG | - | chr8_1:9371587-9371606 | Msa1177040:intron | 30.0% |
| ! | GTTGAGTGTTATTATTAGAG+GGG | - | chr8_1:9371589-9371608 | Msa1177040:intron | 30.0% |
| ATTGCAATTTCCTCCATAAA+TGG | + | chr8_1:9372518-9372537 | None:intergenic | 30.0% | |
| CAATTTCCATTCGTAAGAAT+AGG | - | chr8_1:9371649-9371668 | Msa1177040:intron | 30.0% | |
| CAATACATCTCAAATAGAAG+GGG | + | chr8_1:9372011-9372030 | None:intergenic | 30.0% | |
| CCAATACATCTCAAATAGAA+GGG | + | chr8_1:9372012-9372031 | None:intergenic | 30.0% | |
| TCCAATACATCTCAAATAGA+AGG | + | chr8_1:9372013-9372032 | None:intergenic | 30.0% | |
| ! | TATTTGAGATGTATTGGATG+TGG | - | chr8_1:9372015-9372034 | Msa1177040:intron | 30.0% |
| ! | ATTTGAGATGTATTGGATGT+GGG | - | chr8_1:9372016-9372035 | Msa1177040:intron | 30.0% |
| AAATAGATTCGAACATGAGA+CGG | - | chr8_1:9372249-9372268 | Msa1177040:intron | 30.0% | |
| TCATATCAGTAAGTGTAAGA+AGG | - | chr8_1:9372430-9372449 | Msa1177040:intron | 30.0% | |
| GTGGAAAACTTAGAAATCAA+TGG | + | chr8_1:9372469-9372488 | None:intergenic | 30.0% | |
| ATTGCAATTTCCTCCATAAA+TGG | - | chr8_1:9372518-9372537 | Msa1177040:intron | 30.0% | |
| TTAGGGAAAATTACATTGAC+GGG | + | chr8_1:9372588-9372607 | None:intergenic | 30.0% | |
| CAGCGTTTAAAAATAAAGAC+AGG | + | chr8_1:9372710-9372729 | None:intergenic | 30.0% | |
| !!! | CTGTCTTTATTTTTAAACGC+TGG | - | chr8_1:9372708-9372727 | Msa1177040:intron | 30.0% |
| ! | CGAAAATCTGTACATTCTTT+TGG | - | chr8_1:9373166-9373185 | Msa1177040:intron | 30.0% |
| ! | TACATTTTAAGCATGAGTTG+AGG | - | chr8_1:9373201-9373220 | Msa1177040:intron | 30.0% |
| GTTGAGGATACTATAATTGA+TGG | - | chr8_1:9373217-9373236 | Msa1177040:intron | 30.0% | |
| TTTCACAATAGAGTTGTGAT+TGG | - | chr8_1:9373276-9373295 | Msa1177040:intron | 30.0% | |
| AAGAAAAGCAACAACCTAAA+GGG | + | chr8_1:9373602-9373621 | None:intergenic | 30.0% | |
| ! | TTTGCTGTATTTACAGTTTG+TGG | - | chr8_1:9373690-9373709 | Msa1177040:CDS | 30.0% |
| GAAATTTGAATCTCTCTTAG+TGG | - | chr8_1:9373756-9373775 | Msa1177040:intron | 30.0% | |
| CAGAAACACAGATGAATAAA+TGG | - | chr8_1:9374049-9374068 | Msa1177040:intron | 30.0% | |
| ACAGATGAATAAATGGGAAA+TGG | - | chr8_1:9374056-9374075 | Msa1177040:intron | 30.0% | |
| CAGATGAATAAATGGGAAAT+GGG | - | chr8_1:9374057-9374076 | Msa1177040:intron | 30.0% | |
| TAGTGTATAAGGAGATTCAT+AGG | + | chr8_1:9374199-9374218 | None:intergenic | 30.0% | |
| ATGAATCTCCTTATACACTA+AGG | - | chr8_1:9374199-9374218 | Msa1177040:intron | 30.0% | |
| ATTCGATTCACTTAAACACA+AGG | + | chr8_1:9374816-9374835 | None:intergenic | 30.0% | |
| TTGTGTTTAAGTGAATCGAA+TGG | - | chr8_1:9374815-9374834 | Msa1177040:intron | 30.0% | |
| ! | CTTTTACAATACTTTTGGTC+TGG | + | chr8_1:9374941-9374960 | None:intergenic | 30.0% |
| ATCTTGCTTCAATAAACTTG+GGG | - | chr8_1:9375261-9375280 | Msa1177040:intron | 30.0% | |
| AAAATTCATTGGAAAGAAGG+GGG | + | chr8_1:9375496-9375515 | None:intergenic | 30.0% | |
| CAAAATTCATTGGAAAGAAG+GGG | + | chr8_1:9375497-9375516 | None:intergenic | 30.0% | |
| GACAAAATTCATTGGAAAGA+AGG | + | chr8_1:9375499-9375518 | None:intergenic | 30.0% | |
| GTTAATTCTTACGTTTCATC+TGG | + | chr8_1:9375623-9375642 | None:intergenic | 30.0% | |
| GAATTCCAACATAATGTTTG+TGG | - | chr8_1:9375754-9375773 | Msa1177040:intron | 30.0% | |
| ATCTACCACAAACATTATGT+TGG | + | chr8_1:9375762-9375781 | None:intergenic | 30.0% | |
| ! | TGTTCTATTTCTTGCTAAGA+AGG | - | chr8_1:9375810-9375829 | Msa1177040:intron | 30.0% |
| ! | AGTAAACTGAAAGGAAGTAT+AGG | + | chr8_1:9375838-9375857 | None:intergenic | 30.0% |
| !! | ACATCATTAACTGGTTTGAT+TGG | + | chr8_1:9375961-9375980 | None:intergenic | 30.0% |
| ACTCACAATAGCACATATTA+TGG | + | chr8_1:9376427-9376446 | None:intergenic | 30.0% | |
| TGAGAGATTGAGGTGAATTT+GGG | + | chr8_1:9369985-9370004 | None:intergenic | 35.0% | |
| TTGAGAGATTGAGGTGAATT+TGG | + | chr8_1:9369986-9370005 | None:intergenic | 35.0% | |
| ! | AGAAGAATGAGAGGTTGTTT+TGG | + | chr8_1:9370069-9370088 | None:intergenic | 35.0% |
| ! | GCTGCTGACATTGAAATTTT+TGG | + | chr8_1:9370154-9370173 | None:intergenic | 35.0% |
| AAACACTGCACTTCCAATAA+TGG | - | chr8_1:9370219-9370238 | Msa1177040:exon | 35.0% | |
| ACAAATAAGTCAGTCCAAAC+AGG | - | chr8_1:9370467-9370486 | Msa1177040:intron | 35.0% | |
| CTGAACCTATAAGCAGTATA+AGG | + | chr8_1:9370494-9370513 | None:intergenic | 35.0% | |
| CCCCCTTAAAAATAATGAAG+TGG | + | chr8_1:9370897-9370916 | None:intergenic | 35.0% | |
| ! | TCCCCTACTTATTTCTTGAT+GGG | - | chr8_1:9370992-9371011 | Msa1177040:intron | 35.0% |
| TCCCATCAAGAAATAAGTAG+GGG | + | chr8_1:9370996-9371015 | None:intergenic | 35.0% | |
| GTCCCATCAAGAAATAAGTA+GGG | + | chr8_1:9370997-9371016 | None:intergenic | 35.0% | |
| TGTCCCATCAAGAAATAAGT+AGG | + | chr8_1:9370998-9371017 | None:intergenic | 35.0% | |
| AATGAGCAGAGGAAAACTAA+TGG | + | chr8_1:9371070-9371089 | None:intergenic | 35.0% | |
| GTTTATGAATGAATGAGCAG+AGG | + | chr8_1:9371081-9371100 | None:intergenic | 35.0% | |
| TTGAGGGGAATATGAAATTC+TGG | + | chr8_1:9371112-9371131 | None:intergenic | 35.0% | |
| ACGCCATTCTTTCACATAAA+TGG | - | chr8_1:9371273-9371292 | Msa1177040:CDS | 35.0% | |
| TGTAACGACCAACATTAACA+GGG | + | chr8_1:9371402-9371421 | None:intergenic | 35.0% | |
| ! | TGTTTCATCTCTTTTGCTCA+CGG | + | chr8_1:9371467-9371486 | None:intergenic | 35.0% |
| ATATTCGGCAACAAGTTTGT+CGG | + | chr8_1:9371492-9371511 | None:intergenic | 35.0% | |
| AATTTCCTCCATAAATGGAG+AGG | + | chr8_1:9372523-9372542 | None:intergenic | 35.0% | |
| ! | CCCTTCTATTTGAGATGTAT+TGG | - | chr8_1:9372009-9372028 | Msa1177040:intron | 35.0% |
| TCGCCAACTCAAATTGATTA+TGG | - | chr8_1:9372072-9372091 | Msa1177040:intron | 35.0% | |
| CAATCTATCCCAAAACAACA+AGG | - | chr8_1:9372103-9372122 | Msa1177040:intron | 35.0% | |
| !!! | TCACATAGCCTTGTTGTTTT+GGG | + | chr8_1:9372114-9372133 | None:intergenic | 35.0% |
| AGTCACAAAATCAGAGATAG+AGG | - | chr8_1:9372226-9372245 | Msa1177040:intron | 35.0% | |
| TCAACAAAGCTATGTATCCT+TGG | + | chr8_1:9372328-9372347 | None:intergenic | 35.0% | |
| !! | ATAGCTTTGTTGAAGACGAA+GGG | - | chr8_1:9372335-9372354 | Msa1177040:intron | 35.0% |
| ATTCATAAGAATAGGACACG+TGG | + | chr8_1:9372488-9372507 | None:intergenic | 35.0% | |
| ACGTGTCCTATTCTTATGAA+TGG | - | chr8_1:9372487-9372506 | Msa1177040:intron | 35.0% | |
| AATTTCCTCCATAAATGGAG+AGG | - | chr8_1:9372523-9372542 | Msa1177040:intron | 35.0% | |
| TAGGGAAAATTACATTGACG+GGG | + | chr8_1:9372587-9372606 | None:intergenic | 35.0% | |
| TAAGATATGCGTGAACCTAA+GGG | + | chr8_1:9372645-9372664 | None:intergenic | 35.0% | |
| TTAAGATATGCGTGAACCTA+AGG | + | chr8_1:9372646-9372665 | None:intergenic | 35.0% | |
| TAACGCATGTACTGGAAAAA+TGG | - | chr8_1:9372770-9372789 | Msa1177040:intron | 35.0% | |
| AACGCATGTACTGGAAAAAT+GGG | - | chr8_1:9372771-9372790 | Msa1177040:intron | 35.0% | |
| ATGTACTGGAAAAATGGGAA+AGG | - | chr8_1:9372776-9372795 | Msa1177040:intron | 35.0% | |
| ATCTTATATGTATGTGGCAG+AGG | - | chr8_1:9373104-9373123 | Msa1177040:CDS | 35.0% | |
| ! | AATTGATGGCAGAGAATATG+TGG | - | chr8_1:9373231-9373250 | Msa1177040:intron | 35.0% |
| !!! | TGTGCTATTTATCCTTTTCC+AGG | - | chr8_1:9373357-9373376 | Msa1177040:intron | 35.0% |
| ! | ATTTATCCTTTTCCAGGCAA+TGG | - | chr8_1:9373363-9373382 | Msa1177040:intron | 35.0% |
| CAATGGTGAGTTATACAGTA+AGG | - | chr8_1:9373380-9373399 | Msa1177040:intron | 35.0% | |
| CAGGTAAATCATTGAAAACC+TGG | - | chr8_1:9373510-9373529 | Msa1177040:intron | 35.0% | |
| TGTCGTGAAAAATAGGAAAG+TGG | + | chr8_1:9373537-9373556 | None:intergenic | 35.0% | |
| GTGTGATTGTCGTGAAAAAT+AGG | + | chr8_1:9373544-9373563 | None:intergenic | 35.0% | |
| ! | TGCTGCTATATTTTCCCTTT+AGG | - | chr8_1:9373585-9373604 | Msa1177040:CDS | 35.0% |
| CAAGAAAAGCAACAACCTAA+AGG | + | chr8_1:9373603-9373622 | None:intergenic | 35.0% | |
| TCTTGCAGCTATGGAAATTA+TGG | - | chr8_1:9373618-9373637 | Msa1177040:CDS | 35.0% | |
| TATTTACAGTTTGTGGCTGT+GGG | - | chr8_1:9373697-9373716 | Msa1177040:CDS | 35.0% | |
| ! | GAATCTCTCTTAGTGGTTTT+CGG | - | chr8_1:9373763-9373782 | Msa1177040:intron | 35.0% |
| ! | AATCTCTCTTAGTGGTTTTC+GGG | - | chr8_1:9373764-9373783 | Msa1177040:intron | 35.0% |
| !! | TTTCGGGTCACAATTTTCTT+TGG | - | chr8_1:9373780-9373799 | Msa1177040:intron | 35.0% |
| ! | TTTAGAGTCTCGTCTTTATG+CGG | + | chr8_1:9373881-9373900 | None:intergenic | 35.0% |
| CATGATTCAATTTACCGTGT+TGG | + | chr8_1:9374009-9374028 | None:intergenic | 35.0% | |
| CAACACGGTAAATTGAATCA+TGG | - | chr8_1:9374007-9374026 | Msa1177040:intron | 35.0% | |
| ! | TGGAATAGCCTTAGTGTATA+AGG | + | chr8_1:9374210-9374229 | None:intergenic | 35.0% |
| TAGAAACTTGAATTGACTGC+TGG | - | chr8_1:9374486-9374505 | Msa1177040:intron | 35.0% | |
| AGAAACTTGAATTGACTGCT+GGG | - | chr8_1:9374487-9374506 | Msa1177040:intron | 35.0% | |
| AGCATTCAGATACTGTTTAC+CGG | - | chr8_1:9374542-9374561 | Msa1177040:intron | 35.0% | |
| GATCGAGTCTATAATGAATC+TGG | - | chr8_1:9374643-9374662 | Msa1177040:intron | 35.0% | |
| AGTCTATAATGAATCTGGTC+TGG | - | chr8_1:9374648-9374667 | Msa1177040:intron | 35.0% | |
| !! | GTGCAACCTTTTGTTTAAGT+AGG | - | chr8_1:9374768-9374787 | Msa1177040:intron | 35.0% |
| !! | ACCTTTTGTTTAAGTAGGTC+TGG | - | chr8_1:9374773-9374792 | Msa1177040:intron | 35.0% |
| TTAAGTGAATCGAATGGTAC+TGG | - | chr8_1:9374821-9374840 | Msa1177040:intron | 35.0% | |
| ! | TTTTGGTCTGGCAATAAGTA+TGG | + | chr8_1:9374929-9374948 | None:intergenic | 35.0% |
| ! | TGTTGCTACTAGTTTGTGAT+TGG | - | chr8_1:9374998-9375017 | Msa1177040:intron | 35.0% |
| ATGCATTCTTCCAAGATTGT+AGG | - | chr8_1:9375180-9375199 | Msa1177040:intron | 35.0% | |
| GACTCTAATACCTACAATCT+TGG | + | chr8_1:9375193-9375212 | None:intergenic | 35.0% | |
| AGTATGCTAATTCTTCAGTG+CGG | + | chr8_1:9375426-9375445 | None:intergenic | 35.0% | |
| CAAGAACCACAAATTCTTAC+TGG | - | chr8_1:9375465-9375484 | Msa1177040:intron | 35.0% | |
| GAAAGTCCAGTAAGAATTTG+TGG | + | chr8_1:9375474-9375493 | None:intergenic | 35.0% | |
| GACAAGAGAAGTAAACTGAA+AGG | + | chr8_1:9375847-9375866 | None:intergenic | 35.0% | |
| AAGTAGTGCATTTCTCACAA+TGG | - | chr8_1:9375908-9375927 | Msa1177040:intron | 35.0% | |
| ! | TATGATTGATGTTTTGCGAG+AGG | - | chr8_1:9376255-9376274 | Msa1177040:intron | 35.0% |
| ! | ATGATTGATGTTTTGCGAGA+GGG | - | chr8_1:9376256-9376275 | Msa1177040:intron | 35.0% |
| AGAGATTGAGGTGAATTTGG+GGG | + | chr8_1:9369983-9370002 | None:intergenic | 40.0% | |
| GAGAGATTGAGGTGAATTTG+GGG | + | chr8_1:9369984-9370003 | None:intergenic | 40.0% | |
| GAGAGAGATTTGAGAGATTG+AGG | + | chr8_1:9369995-9370014 | None:intergenic | 40.0% | |
| TGCTATTGGAGAAGAATGAG+AGG | + | chr8_1:9370078-9370097 | None:intergenic | 40.0% | |
| ATTTCCCCATTTCTCAGAAG+AGG | - | chr8_1:9370113-9370132 | Msa1177040:three_prime_UTR | 40.0% | |
| ! | ATCTCCTCTTCTGAGAAATG+GGG | + | chr8_1:9370120-9370139 | None:intergenic | 40.0% |
| ! | GATCTCCTCTTCTGAGAAAT+GGG | + | chr8_1:9370121-9370140 | None:intergenic | 40.0% |
| ATATCCACGCTATAGCATAG+CGG | + | chr8_1:9370813-9370832 | None:intergenic | 40.0% | |
| CATCAAGAAATAAGTAGGGG+AGG | + | chr8_1:9370993-9371012 | None:intergenic | 40.0% | |
| ! | CTCCCCTACTTATTTCTTGA+TGG | - | chr8_1:9370991-9371010 | Msa1177040:intron | 40.0% |
| ! | AGTACTGGAATTCTGTTGAG+GGG | + | chr8_1:9371127-9371146 | None:intergenic | 40.0% |
| !! | GAGTACTGGAATTCTGTTGA+GGG | + | chr8_1:9371128-9371147 | None:intergenic | 40.0% |
| !! | TGAGTACTGGAATTCTGTTG+AGG | + | chr8_1:9371129-9371148 | None:intergenic | 40.0% |
| ATCTAGCTGTCATGTTAGTG+CGG | - | chr8_1:9371222-9371241 | Msa1177040:CDS | 40.0% | |
| TATGTGAAAGAATGGCGTAC+TGG | + | chr8_1:9371271-9371290 | None:intergenic | 40.0% | |
| !! | AACTCTGGGGCAACTAAAAT+TGG | + | chr8_1:9371303-9371322 | None:intergenic | 40.0% |
| !!! | ATTTTAGTTGCCCCAGAGTT+TGG | - | chr8_1:9371303-9371322 | Msa1177040:intron | 40.0% |
| TGGTCCGATGAAGTTAATAG+TGG | - | chr8_1:9371323-9371342 | Msa1177040:intron | 40.0% | |
| GGTCCGATGAAGTTAATAGT+GGG | - | chr8_1:9371324-9371343 | Msa1177040:intron | 40.0% | |
| CAGCCCACTATTAACTTCAT+CGG | + | chr8_1:9371330-9371349 | None:intergenic | 40.0% | |
| TATCTCGACCCTGTTAATGT+TGG | - | chr8_1:9371391-9371410 | Msa1177040:intron | 40.0% | |
| CTGTAACGACCAACATTAAC+AGG | + | chr8_1:9371403-9371422 | None:intergenic | 40.0% | |
| !! | TTTTGCTCACGGACTATGTA+TGG | + | chr8_1:9371456-9371475 | None:intergenic | 40.0% |
| ACCAAGCTATGTGAAAACCA+GGG | - | chr8_1:9371534-9371553 | Msa1177040:intron | 40.0% | |
| AAAAAAACGATCAACTCCCC+TGG | + | chr8_1:9371554-9371573 | None:intergenic | 40.0% | |
| ! | TGTTATTATTAGAGGGGTGC+AGG | - | chr8_1:9371595-9371614 | Msa1177040:intron | 40.0% |
| ACGTGTCCTATTCTTACGAA+TGG | + | chr8_1:9371658-9371677 | None:intergenic | 40.0% | |
| ATTCGTAAGAATAGGACACG+TGG | - | chr8_1:9371657-9371676 | Msa1177040:intron | 40.0% | |
| ATGAAAAACCACCCACTTTC+TGG | - | chr8_1:9371747-9371766 | Msa1177040:intron | 40.0% | |
| TCAAATAGAAGGGGAATCAG+CGG | + | chr8_1:9372002-9372021 | None:intergenic | 40.0% | |
| !!! | GTCACATAGCCTTGTTGTTT+TGG | + | chr8_1:9372115-9372134 | None:intergenic | 40.0% |
| !! | CATAGCTTTGTTGAAGACGA+AGG | - | chr8_1:9372334-9372353 | Msa1177040:intron | 40.0% |
| TTTGTTGAAGACGAAGGGTA+CGG | - | chr8_1:9372340-9372359 | Msa1177040:intron | 40.0% | |
| TTGCTGAACCAGACAAAGAA+GGG | - | chr8_1:9372363-9372382 | Msa1177040:intron | 40.0% | |
| CACCCTTATTAGAGACCTTA+GGG | - | chr8_1:9372551-9372570 | Msa1177040:intron | 40.0% | |
| ACCCTTATTAGAGACCTTAG+GGG | - | chr8_1:9372552-9372571 | Msa1177040:intron | 40.0% | |
| TCCCCTAAGGTCTCTAATAA+GGG | + | chr8_1:9372556-9372575 | None:intergenic | 40.0% | |
| AGGGAAAATTACATTGACGG+GGG | + | chr8_1:9372586-9372605 | None:intergenic | 40.0% | |
| ! | AATGTTGTTCCTGTGTCGTT+TGG | - | chr8_1:9372831-9372850 | Msa1177040:intron | 40.0% |
| !! | ATGTTGTTCCTGTGTCGTTT+GGG | - | chr8_1:9372832-9372851 | Msa1177040:intron | 40.0% |
| AGAAAACTCTCTCTGTCAGA+TGG | + | chr8_1:9372918-9372937 | None:intergenic | 40.0% | |
| CTATTGTGAAAGTCCAGAGA+AGG | + | chr8_1:9373267-9373286 | None:intergenic | 40.0% | |
| GGTGAGTTATACAGTAAGGT+CGG | - | chr8_1:9373384-9373403 | Msa1177040:intron | 40.0% | |
| GTGAGTTATACAGTAAGGTC+GGG | - | chr8_1:9373385-9373404 | Msa1177040:intron | 40.0% | |
| TGAGTTATACAGTAAGGTCG+GGG | - | chr8_1:9373386-9373405 | Msa1177040:intron | 40.0% | |
| TTTACCTGCTTTCCCATTTG+CGG | + | chr8_1:9373498-9373517 | None:intergenic | 40.0% | |
| GAAAAATAGGAAAGTGGTCC+AGG | + | chr8_1:9373531-9373550 | None:intergenic | 40.0% | |
| !!! | TGTTGCTTTTCTTGCAGCTA+TGG | - | chr8_1:9373609-9373628 | Msa1177040:CDS | 40.0% |
| ATTATGGCAGAGCAATTTCC+TGG | - | chr8_1:9373634-9373653 | Msa1177040:CDS | 40.0% | |
| CAGCAAAAGAGATACCTGTA+AGG | + | chr8_1:9373677-9373696 | None:intergenic | 40.0% | |
| GTATTTACAGTTTGTGGCTG+TGG | - | chr8_1:9373696-9373715 | Msa1177040:CDS | 40.0% | |
| ! | TTCAATTTACCGTGTTGGTC+AGG | + | chr8_1:9374004-9374023 | None:intergenic | 40.0% |
| AAGGAGATTCATAGGAGAGA+GGG | + | chr8_1:9374191-9374210 | None:intergenic | 40.0% | |
| TAAGGAGATTCATAGGAGAG+AGG | + | chr8_1:9374192-9374211 | None:intergenic | 40.0% | |
| ACTAAGGCTATTCCACTATC+TGG | - | chr8_1:9374215-9374234 | Msa1177040:intron | 40.0% | |
| !! | TGGTCTTCTTAGGCTTTGTT+TGG | - | chr8_1:9374247-9374266 | Msa1177040:intron | 40.0% |
| !! | GGTCTTCTTAGGCTTTGTTT+GGG | - | chr8_1:9374248-9374267 | Msa1177040:intron | 40.0% |
| !! | TTAGGCTTTGTTTGGGAGTT+TGG | - | chr8_1:9374255-9374274 | Msa1177040:intron | 40.0% |
| !! | GTACTCACACAGGGTTTTAT+AGG | + | chr8_1:9374593-9374612 | None:intergenic | 40.0% |
| TGCACTGAATCATGCATTTG+AGG | - | chr8_1:9374614-9374633 | Msa1177040:intron | 40.0% | |
| GCCAGACCTACTTAAACAAA+AGG | + | chr8_1:9374777-9374796 | None:intergenic | 40.0% | |
| !!! | TTTTAGAGAGTACTGTCCTG+TGG | - | chr8_1:9374853-9374872 | Msa1177040:intron | 40.0% |
| AATTACAATCTGCACTCCAC+AGG | + | chr8_1:9374872-9374891 | None:intergenic | 40.0% | |
| GTGTGTTAGATCACATTGCA+TGG | - | chr8_1:9375304-9375323 | Msa1177040:intron | 40.0% | |
| ! | GTGTATGATTTTATGCTGGC+TGG | - | chr8_1:9375392-9375411 | Msa1177040:intron | 40.0% |
| TGGTAGATCAATATACGCTG+AGG | - | chr8_1:9375774-9375793 | Msa1177040:intron | 40.0% | |
| GGTAGATCAATATACGCTGA+GGG | - | chr8_1:9375775-9375794 | Msa1177040:intron | 40.0% | |
| ATGTATGCAGATCGAAGCAA+AGG | - | chr8_1:9376213-9376232 | Msa1177040:intron | 40.0% | |
| AATCGTCAAGCAACTTCTAC+AGG | + | chr8_1:9376328-9376347 | None:intergenic | 40.0% | |
| GAGGTGAATTTGGGGGTTTA+GGG | + | chr8_1:9369976-9369995 | None:intergenic | 45.0% | |
| TGAGGTGAATTTGGGGGTTT+AGG | + | chr8_1:9369977-9369996 | None:intergenic | 45.0% | |
| !!! | AGAGGTTGTTTTGGTGTCTG+TGG | + | chr8_1:9370060-9370079 | None:intergenic | 45.0% |
| TCTCCAATAGCACCACTACA+AGG | - | chr8_1:9370086-9370105 | Msa1177040:three_prime_UTR | 45.0% | |
| !! | TCTCCTTGTAGTGGTGCTAT+TGG | + | chr8_1:9370092-9370111 | None:intergenic | 45.0% |
| GGGGAAATTTCTCCTTGTAG+TGG | + | chr8_1:9370101-9370120 | None:intergenic | 45.0% | |
| ! | CGATCTCCTCTTCTGAGAAA+TGG | + | chr8_1:9370122-9370141 | None:intergenic | 45.0% |
| !! | AGTGCAGTGTTTTGAGCTGA+AGG | + | chr8_1:9370211-9370230 | None:intergenic | 45.0% |
| AAGTTGGACTTAGGGCAGTT+TGG | - | chr8_1:9370392-9370411 | Msa1177040:intron | 45.0% | |
| AAGCAGTATAAGGGCCTGTT+TGG | + | chr8_1:9370484-9370503 | None:intergenic | 45.0% | |
| CAGGCCCTTATACTGCTTAT+AGG | - | chr8_1:9370486-9370505 | Msa1177040:intron | 45.0% | |
| AAATCCGCTATGCTATAGCG+TGG | - | chr8_1:9370806-9370825 | Msa1177040:intron | 45.0% | |
| ACACATCCCTAGCAACTTAG+CGG | - | chr8_1:9371019-9371038 | Msa1177040:intron | 45.0% | |
| ACTTCATCGGACCAAACTCT+GGG | + | chr8_1:9371317-9371336 | None:intergenic | 45.0% | |
| AACTTCATCGGACCAAACTC+TGG | + | chr8_1:9371318-9371337 | None:intergenic | 45.0% | |
| GACCAAGCTATGTGAAAACC+AGG | - | chr8_1:9371533-9371552 | Msa1177040:intron | 45.0% | |
| CCAAGCTATGTGAAAACCAG+GGG | - | chr8_1:9371535-9371554 | Msa1177040:intron | 45.0% | |
| ! | GGTGTGGTTTTCCAGAAAGT+GGG | + | chr8_1:9371761-9371780 | None:intergenic | 45.0% |
| ! | TGGTGTGGTTTTCCAGAAAG+TGG | + | chr8_1:9371762-9371781 | None:intergenic | 45.0% |
| GGGTTGCTAAGAAATTCTCC+AGG | + | chr8_1:9371914-9371933 | None:intergenic | 45.0% | |
| ATATGGCGGTCGACTGAAAT+TGG | - | chr8_1:9372281-9372300 | Msa1177040:intron | 45.0% | |
| GTTGCTGAACCAGACAAAGA+AGG | - | chr8_1:9372362-9372381 | Msa1177040:intron | 45.0% | |
| ATCTGCAACCCTTCTTTGTC+TGG | + | chr8_1:9372374-9372393 | None:intergenic | 45.0% | |
| CAGATCCTCTCCATTTATGG+AGG | + | chr8_1:9372531-9372550 | None:intergenic | 45.0% | |
| GTGCAGATCCTCTCCATTTA+TGG | + | chr8_1:9372534-9372553 | None:intergenic | 45.0% | |
| GCACCCTTATTAGAGACCTT+AGG | - | chr8_1:9372550-9372569 | Msa1177040:intron | 45.0% | |
| CTCCCCTAAGGTCTCTAATA+AGG | + | chr8_1:9372557-9372576 | None:intergenic | 45.0% | |
| CTTATTAGAGACCTTAGGGG+AGG | - | chr8_1:9372555-9372574 | Msa1177040:intron | 45.0% | |
| GTTTGGAAGTTCTCTCCCTT+AGG | - | chr8_1:9372627-9372646 | Msa1177040:intron | 45.0% | |
| GCTTAGGTTAACGCATGTAC+TGG | - | chr8_1:9372762-9372781 | Msa1177040:intron | 45.0% | |
| ATTAATGCAGCAGAAGCTGC+TGG | - | chr8_1:9372804-9372823 | Msa1177040:intron | 45.0% | |
| TTTGGGTGTGAAGAAGAGTC+CGG | - | chr8_1:9372849-9372868 | Msa1177040:CDS | 45.0% | |
| ACAGACCTCAAAAGTCTGTC+CGG | + | chr8_1:9372871-9372890 | None:intergenic | 45.0% | |
| !!! | AGACTTTTGAGGTCTGTGGA+AGG | - | chr8_1:9372874-9372893 | Msa1177040:CDS | 45.0% |
| !!! | GACTTTTGAGGTCTGTGGAA+GGG | - | chr8_1:9372875-9372894 | Msa1177040:CDS | 45.0% |
| ACAGTACCAGATGCAGTCAA+TGG | - | chr8_1:9372984-9373003 | Msa1177040:intron | 45.0% | |
| ! | TGCATACCATTGACTGCATC+TGG | + | chr8_1:9372993-9373012 | None:intergenic | 45.0% |
| AACTCACCATTGCCTGGAAA+AGG | + | chr8_1:9373372-9373391 | None:intergenic | 45.0% | |
| CTGTATAACTCACCATTGCC+TGG | + | chr8_1:9373378-9373397 | None:intergenic | 45.0% | |
| TTACCTGCTTTCCCATTTGC+GGG | + | chr8_1:9373497-9373516 | None:intergenic | 45.0% | |
| AATTTCCTGGAGCCTTCTCT+GGG | - | chr8_1:9373647-9373666 | Msa1177040:CDS | 45.0% | |
| CTGTAAGGAATACCCAGAGA+AGG | + | chr8_1:9373662-9373681 | None:intergenic | 45.0% | |
| CTTCTCTGGGTATTCCTTAC+AGG | - | chr8_1:9373660-9373679 | Msa1177040:CDS | 45.0% | |
| CGTATGGCGTACCTTCTATT+GGG | - | chr8_1:9373832-9373851 | Msa1177040:intron | 45.0% | |
| ! | CTCGTCTTTATGCGGTTTTG+TGG | + | chr8_1:9373873-9373892 | None:intergenic | 45.0% |
| !! | TGGAGCTTTGCTCTAAGAGT+AGG | + | chr8_1:9374117-9374136 | None:intergenic | 45.0% |
| ! | CATAGGAGAGAGGGTATGAT+GGG | + | chr8_1:9374182-9374201 | None:intergenic | 45.0% |
| ! | TCATAGGAGAGAGGGTATGA+TGG | + | chr8_1:9374183-9374202 | None:intergenic | 45.0% |
| AAAGCCTAAGAAGACCAGTG+AGG | + | chr8_1:9374244-9374263 | None:intergenic | 45.0% | |
| !! | GCTTTGTTTGGGAGTTTGGA+GGG | - | chr8_1:9374259-9374278 | Msa1177040:intron | 45.0% |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | - | chr8_1:9374260-9374279 | Msa1177040:intron | 45.0% |
| TTTGTTTGGGAGTTTGGAGG+GGG | - | chr8_1:9374261-9374280 | Msa1177040:intron | 45.0% | |
| TTTGGAGGGGGGGAAATATA+GGG | - | chr8_1:9374273-9374292 | Msa1177040:intron | 45.0% | |
| TCAGTGCAAGTACTCACACA+GGG | + | chr8_1:9374602-9374621 | None:intergenic | 45.0% | |
| TTCAGTGCAAGTACTCACAC+AGG | + | chr8_1:9374603-9374622 | None:intergenic | 45.0% | |
| !! | TGTGGTTTGCTTTATGCGCA+TGG | - | chr8_1:9374729-9374748 | Msa1177040:intron | 45.0% |
| TTTGCTTTATGCGCATGGTC+TGG | - | chr8_1:9374734-9374753 | Msa1177040:intron | 45.0% | |
| AAAAGGTTGCACACCAGACT+AGG | + | chr8_1:9374760-9374779 | None:intergenic | 45.0% | |
| !! | GCAAGCAAAGTTGATGCATC+TGG | - | chr8_1:9375220-9375239 | Msa1177040:intron | 45.0% |
| GAAGCAAGATATCACAGCCT+TGG | + | chr8_1:9375251-9375270 | None:intergenic | 45.0% | |
| ACTTGGGGCTTCTTTCGATA+TGG | - | chr8_1:9375276-9375295 | Msa1177040:intron | 45.0% | |
| GCAATGTGATCTAACACACC+TGG | + | chr8_1:9375303-9375322 | None:intergenic | 45.0% | |
| TACAATTGATCAGAGACCCC+AGG | - | chr8_1:9375522-9375541 | Msa1177040:intron | 45.0% | |
| !! | ACCATTTCGACTTGTTGCCT+GGG | + | chr8_1:9375542-9375561 | None:intergenic | 45.0% |
| !! | TACCATTTCGACTTGTTGCC+TGG | + | chr8_1:9375543-9375562 | None:intergenic | 45.0% |
| AGGCAACAAGTCGAAATGGT+AGG | - | chr8_1:9375542-9375561 | Msa1177040:intron | 45.0% | |
| !! | ATAAAATGAATTAAAAATTA+GGG | + | chr8_1:9372605-9372624 | None:intergenic | 5.0% |
| TCAGAAGAGGAGATCGCGTT+TGG | - | chr8_1:9370126-9370145 | Msa1177040:three_prime_UTR | 50.0% | |
| GGACTTAGGGCAGTTTGGTT+TGG | - | chr8_1:9370397-9370416 | Msa1177040:intron | 50.0% | |
| CCAACTCCGCTAAGTTGCTA+GGG | + | chr8_1:9371028-9371047 | None:intergenic | 50.0% | |
| ACCAACTCCGCTAAGTTGCT+AGG | + | chr8_1:9371029-9371048 | None:intergenic | 50.0% | |
| GTGAAAGAATGGCGTACTGG+CGG | + | chr8_1:9371268-9371287 | None:intergenic | 50.0% | |
| CTTCATCGGACCAAACTCTG+GGG | + | chr8_1:9371316-9371335 | None:intergenic | 50.0% | |
| !! | CCCCTGGTTTTCACATAGCT+TGG | + | chr8_1:9371538-9371557 | None:intergenic | 50.0% |
| GTGCAGGTCCTCTCCATTTA+TGG | - | chr8_1:9371611-9371630 | Msa1177040:intron | 50.0% | |
| CAGGTCCTCTCCATTTATGG+AGG | - | chr8_1:9371614-9371633 | Msa1177040:intron | 50.0% | |
| ! | GTGGTTTTCCAGAAAGTGGG+TGG | + | chr8_1:9371758-9371777 | None:intergenic | 50.0% |
| AGAGAGAGAGAGAGAGAGAG+AGG | + | chr8_1:9371785-9371804 | None:intergenic | 50.0% | |
| CTCTCTCTCTCTCTCTCACT+TGG | - | chr8_1:9371879-9371898 | Msa1177040:intron | 50.0% | |
| AATAGAAGGGGAATCAGCGG+CGG | + | chr8_1:9371999-9372018 | None:intergenic | 50.0% | |
| TTCGAACATGAGACGGCAAG+CGG | - | chr8_1:9372256-9372275 | Msa1177040:intron | 50.0% | |
| CGGTCGACTGAAATTGGTGA+TGG | - | chr8_1:9372287-9372306 | Msa1177040:intron | 50.0% | |
| ! | GGTGATGGTCACTGTGTCAA+CGG | - | chr8_1:9372302-9372321 | Msa1177040:intron | 50.0% |
| TCTTCACACCCAAACGACAC+AGG | + | chr8_1:9372843-9372862 | None:intergenic | 50.0% | |
| ! | AGAGTCCGGACAGACTTTTG+AGG | - | chr8_1:9372863-9372882 | Msa1177040:CDS | 50.0% |
| !!! | GGACAGACTTTTGAGGTCTG+TGG | - | chr8_1:9372870-9372889 | Msa1177040:CDS | 50.0% |
| TGTCAGATGGACCATGCACA+AGG | + | chr8_1:9372905-9372924 | None:intergenic | 50.0% | |
| TGGCTGTACTTGACCTTCTC+TGG | - | chr8_1:9373251-9373270 | Msa1177040:intron | 50.0% | |
| TGCTGTGATATCCCCGCAAA+TGG | - | chr8_1:9373482-9373501 | Msa1177040:intron | 50.0% | |
| GCTGTGATATCCCCGCAAAT+GGG | - | chr8_1:9373483-9373502 | Msa1177040:intron | 50.0% | |
| TACCTGCTTTCCCATTTGCG+GGG | + | chr8_1:9373496-9373515 | None:intergenic | 50.0% | |
| CAATTTCCTGGAGCCTTCTC+TGG | - | chr8_1:9373646-9373665 | Msa1177040:CDS | 50.0% | |
| !! | TGGCGCAATAGTTGGTAGAG+TGG | + | chr8_1:9373807-9373826 | None:intergenic | 50.0% |
| ACGCTGTATGGCGCAATAGT+TGG | + | chr8_1:9373815-9373834 | None:intergenic | 50.0% | |
| CTATTGCGCCATACAGCGTA+TGG | - | chr8_1:9373816-9373835 | Msa1177040:intron | 50.0% | |
| AAGGTACGCCATACGCTGTA+TGG | + | chr8_1:9373827-9373846 | None:intergenic | 50.0% | |
| GCGTATGGCGTACCTTCTAT+TGG | - | chr8_1:9373831-9373850 | Msa1177040:intron | 50.0% | |
| !! | TGCGGTTTTGTGGACATGCT+TGG | + | chr8_1:9373863-9373882 | None:intergenic | 50.0% |
| !! | GGCTTTGTTTGGGAGTTTGG+AGG | - | chr8_1:9374258-9374277 | Msa1177040:intron | 50.0% |
| TTGTTTGGGAGTTTGGAGGG+GGG | - | chr8_1:9374262-9374281 | Msa1177040:intron | 50.0% | |
| GTTTGGAGGGGGGGAAATAT+AGG | - | chr8_1:9374272-9374291 | Msa1177040:intron | 50.0% | |
| TTGGAGGGGGGGAAATATAG+GGG | - | chr8_1:9374274-9374293 | Msa1177040:intron | 50.0% | |
| GGGGGAAATATAGGGGGAAA+TGG | - | chr8_1:9374281-9374300 | Msa1177040:intron | 50.0% | |
| AATTGACTGCTGGGCAAGCA+TGG | - | chr8_1:9374496-9374515 | Msa1177040:intron | 50.0% | |
| TAAGTAGGTCTGGCCTAGTC+TGG | - | chr8_1:9374783-9374802 | Msa1177040:intron | 50.0% | |
| ACAAGGTTGCACACCAGACT+AGG | + | chr8_1:9374799-9374818 | None:intergenic | 50.0% | |
| ! | TGATGCATCTGGAACTGCCA+AGG | - | chr8_1:9375231-9375250 | Msa1177040:intron | 50.0% |
| GGCTTCTTTCGATATGGACC+AGG | - | chr8_1:9375282-9375301 | Msa1177040:intron | 50.0% | |
| !! | CCATTTCGACTTGTTGCCTG+GGG | + | chr8_1:9375541-9375560 | None:intergenic | 50.0% |
| !! | AGTCCCAGAGGAGCATTTGT+CGG | - | chr8_1:9375565-9375584 | Msa1177040:intron | 50.0% |
| CCCTAGCAACTTAGCGGAGT+TGG | - | chr8_1:9371025-9371044 | Msa1177040:intron | 55.0% | |
| ! | AGAGAGAGAGAGGTGTGGTG+TGG | + | chr8_1:9371777-9371796 | None:intergenic | 55.0% |
| GAGAGAGAGAGAGAGAGGTG+TGG | + | chr8_1:9371782-9371801 | None:intergenic | 55.0% | |
| CTCACTTGGAGCTCAGAACC+TGG | - | chr8_1:9371893-9371912 | Msa1177040:intron | 55.0% | |
| TACAGCGGAGTGATGAGGTG+TGG | + | chr8_1:9371956-9371975 | None:intergenic | 55.0% | |
| !! | TGACTATGGTGGCGGTACAG+CGG | + | chr8_1:9371971-9371990 | None:intergenic | 55.0% |
| CGGCAACATGACTATGGTGG+CGG | + | chr8_1:9371979-9371998 | None:intergenic | 55.0% | |
| TGAGACGGCAAGCGGTGATA+TGG | - | chr8_1:9372264-9372283 | Msa1177040:intron | 55.0% | |
| GGAAGGGAGTTCCTTGTGCA+TGG | - | chr8_1:9372891-9372910 | Msa1177040:CDS | 55.0% | |
| ! | GTCGGGGTACCCTTTGTGAT+GGG | - | chr8_1:9373402-9373421 | Msa1177040:intron | 55.0% |
| ! | TCGGGGTACCCTTTGTGATG+GGG | - | chr8_1:9373403-9373422 | Msa1177040:intron | 55.0% |
| CCGGTTGTCCCCATCACAAA+GGG | + | chr8_1:9373414-9373433 | None:intergenic | 55.0% | |
| ! | CCCTTTGTGATGGGGACAAC+CGG | - | chr8_1:9373411-9373430 | Msa1177040:intron | 55.0% |
| ! | TTTGTGATGGGGACAACCGG+CGG | - | chr8_1:9373414-9373433 | Msa1177040:intron | 55.0% |
| CAACAAGTCCCTATCTCCGC+CGG | + | chr8_1:9373433-9373452 | None:intergenic | 55.0% | |
| ATCCCCGCAAATGGGAAAGC+AGG | - | chr8_1:9373491-9373510 | Msa1177040:intron | 55.0% | |
| GAATACCCAGAGAAGGCTCC+AGG | + | chr8_1:9373655-9373674 | None:intergenic | 55.0% | |
| GCTTGGCGTAGCCCAATAGA+AGG | + | chr8_1:9373846-9373865 | None:intergenic | 55.0% | |
| TGGTAGCAGCCTGACCAACA+CGG | - | chr8_1:9373992-9374011 | Msa1177040:intron | 55.0% | |
| !! | GCCACCTCACTGGTCTTCTT+AGG | - | chr8_1:9374237-9374256 | Msa1177040:intron | 55.0% |
| GCCTAAGAAGACCAGTGAGG+TGG | + | chr8_1:9374241-9374260 | None:intergenic | 55.0% | |
| TGTTTGGGAGTTTGGAGGGG+GGG | - | chr8_1:9374263-9374282 | Msa1177040:intron | 55.0% | |
| TGGAGGGGGGGAAATATAGG+GGG | - | chr8_1:9374275-9374294 | Msa1177040:intron | 55.0% | |
| CCCCAGGCAACAAGTCGAAA+TGG | - | chr8_1:9375538-9375557 | Msa1177040:intron | 55.0% | |
| CGAAATGGTAGGAGTCCCAG+AGG | - | chr8_1:9375553-9375572 | Msa1177040:intron | 55.0% | |
| !! | GTCCCAGAGGAGCATTTGTC+GGG | - | chr8_1:9375566-9375585 | Msa1177040:intron | 55.0% |
| GACCCGACAAATGCTCCTCT+GGG | + | chr8_1:9375571-9375590 | None:intergenic | 55.0% | |
| TGACCCGACAAATGCTCCTC+TGG | + | chr8_1:9375572-9375591 | None:intergenic | 55.0% | |
| ! | AAGAATGGCGTACTGGCGGC+AGG | + | chr8_1:9371264-9371283 | None:intergenic | 60.0% |
| GTCGGCAGTGGCGTTGCATT+GGG | + | chr8_1:9371934-9371953 | None:intergenic | 60.0% | |
| TGATGAGGTGTGGTCGGCAG+TGG | + | chr8_1:9371946-9371965 | None:intergenic | 60.0% | |
| GCGGAGTGATGAGGTGTGGT+CGG | + | chr8_1:9371952-9371971 | None:intergenic | 60.0% | |
| CGGCGGCAACATGACTATGG+TGG | + | chr8_1:9371982-9372001 | None:intergenic | 60.0% | |
| CAGCGGCGGCAACATGACTA+TGG | + | chr8_1:9371985-9372004 | None:intergenic | 60.0% | |
| GACGGCAAGCGGTGATATGG+CGG | - | chr8_1:9372267-9372286 | Msa1177040:intron | 60.0% | |
| GGTCACTGTGTCAACGGCCA+AGG | - | chr8_1:9372308-9372327 | Msa1177040:intron | 60.0% | |
| ! | GGTCGGGGTACCCTTTGTGA+TGG | - | chr8_1:9373401-9373420 | Msa1177040:intron | 60.0% |
| GCCGGTTGTCCCCATCACAA+AGG | + | chr8_1:9373415-9373434 | None:intergenic | 60.0% | |
| CCAGTGAGGTGGCCAGATAG+TGG | + | chr8_1:9374230-9374249 | None:intergenic | 60.0% | |
| CCACTATCTGGCCACCTCAC+TGG | - | chr8_1:9374227-9374246 | Msa1177040:intron | 60.0% | |
| GGTCGGCAGTGGCGTTGCAT+TGG | + | chr8_1:9371935-9371954 | None:intergenic | 65.0% | |
| GGCGGTACAGCGGAGTGATG+AGG | + | chr8_1:9371961-9371980 | None:intergenic | 65.0% | |
| CGGGGGATTGACCTCCCCTA+AGG | + | chr8_1:9372569-9372588 | None:intergenic | 65.0% | |
| TGGGGACAACCGGCGGAGAT+AGG | - | chr8_1:9373421-9373440 | Msa1177040:intron | 65.0% | |
| GGGGACAACCGGCGGAGATA+GGG | - | chr8_1:9373422-9373441 | Msa1177040:intron | 65.0% | |
| GCGCATGGTCTGGCCTAGTC+TGG | - | chr8_1:9374744-9374763 | Msa1177040:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 9369956 | 9376562 | 9369956 | ID=Msa1177040;Name=Msa1177040 |
| chr8_1 | mRNA | 9369956 | 9376562 | 9369956 | ID=Msa1177040-mRNA-1;Parent=Msa1177040;Name=Msa1177040-mRNA-1;_AED=0.03;_eAED=0.03;_QI=63|1|1|1|1|1|8|271|345 |
| chr8_1 | exon | 9369956 | 9370295 | 9369956 | ID=Msa1177040-mRNA-1:exon:3150;Parent=Msa1177040-mRNA-1 |
| chr8_1 | exon | 9370687 | 9370774 | 9370687 | ID=Msa1177040-mRNA-1:exon:3149;Parent=Msa1177040-mRNA-1 |
| chr8_1 | exon | 9370888 | 9370997 | 9370888 | ID=Msa1177040-mRNA-1:exon:3148;Parent=Msa1177040-mRNA-1 |
| chr8_1 | exon | 9371215 | 9371316 | 9371215 | ID=Msa1177040-mRNA-1:exon:3147;Parent=Msa1177040-mRNA-1 |
| chr8_1 | exon | 9372837 | 9372911 | 9372837 | ID=Msa1177040-mRNA-1:exon:3146;Parent=Msa1177040-mRNA-1 |
| chr8_1 | exon | 9373006 | 9373139 | 9373006 | ID=Msa1177040-mRNA-1:exon:3145;Parent=Msa1177040-mRNA-1 |
| chr8_1 | exon | 9373513 | 9373750 | 9373513 | ID=Msa1177040-mRNA-1:exon:3144;Parent=Msa1177040-mRNA-1 |
| chr8_1 | exon | 9376278 | 9376562 | 9376278 | ID=Msa1177040-mRNA-1:exon:3143;Parent=Msa1177040-mRNA-1 |
| chr8_1 | five_prime_UTR | 9376500 | 9376562 | 9376500 | ID=Msa1177040-mRNA-1:five_prime_utr;Parent=Msa1177040-mRNA-1 |
| chr8_1 | CDS | 9376278 | 9376499 | 9376278 | ID=Msa1177040-mRNA-1:cds;Parent=Msa1177040-mRNA-1 |
| chr8_1 | CDS | 9373513 | 9373750 | 9373513 | ID=Msa1177040-mRNA-1:cds;Parent=Msa1177040-mRNA-1 |
| chr8_1 | CDS | 9373006 | 9373139 | 9373006 | ID=Msa1177040-mRNA-1:cds;Parent=Msa1177040-mRNA-1 |
| chr8_1 | CDS | 9372837 | 9372911 | 9372837 | ID=Msa1177040-mRNA-1:cds;Parent=Msa1177040-mRNA-1 |
| chr8_1 | CDS | 9371215 | 9371316 | 9371215 | ID=Msa1177040-mRNA-1:cds;Parent=Msa1177040-mRNA-1 |
| chr8_1 | CDS | 9370888 | 9370997 | 9370888 | ID=Msa1177040-mRNA-1:cds;Parent=Msa1177040-mRNA-1 |
| chr8_1 | CDS | 9370687 | 9370774 | 9370687 | ID=Msa1177040-mRNA-1:cds;Parent=Msa1177040-mRNA-1 |
| chr8_1 | CDS | 9370227 | 9370295 | 9370227 | ID=Msa1177040-mRNA-1:cds;Parent=Msa1177040-mRNA-1 |
| chr8_1 | three_prime_UTR | 9369956 | 9370226 | 9369956 | ID=Msa1177040-mRNA-1:three_prime_utr;Parent=Msa1177040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
