AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1177580

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1177580 MtrunA17_Chr8g0348181 93.013 229 6 1 21 239 1 229 5.48e-159 439
Msa1177580 MtrunA17_Chr8g0379601 92.140 229 8 1 21 239 1 229 7.55e-156 431
Msa1177580 MtrunA17_Chr7g0275751 81.006 179 19 2 71 239 4 177 2.02e-96 279
Msa1177580 MtrunA17_Chr7g0275741 83.721 43 3 1 25 67 2 40 9.54e-16 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1177580 AT1G14620.1 69.697 231 59 2 20 239 3 233 8.08e-117 333
Msa1177580 AT1G14620.2 68.478 184 47 2 20 192 3 186 3.57e-86 255

Find 53 sgRNAs with CRISPR-Local

Find 555 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAATGAATGTAACAGTTTC+TGG 0.120677 8_1:-9948034 Msa1177580:three_prime_UTR
CTTCTCTATGGTGATGCTTA+TGG 0.140363 8_1:-9948946 Msa1177580:CDS
ATAAACAATAGGGTCAATTT+TGG 0.159588 8_1:+9951971 None:intergenic
TTCTCTATGGTGATGCTTAT+GGG 0.182684 8_1:-9948945 Msa1177580:CDS
TCAAAATTCAATGAACTAAT+TGG 0.190241 8_1:+9948057 None:intergenic
ATTCAACCACCATGAAAATT+AGG 0.199768 8_1:-9956261 Msa1177580:intron
AGTAGGAGAAAGTGTTATTT+TGG 0.206570 8_1:+9947795 None:intergenic
GATCCTGTCTGCTCTTCTTT+AGG 0.268390 8_1:+9948508 None:intergenic
AGACTTTACCTTCTTCTCTA+TGG 0.321156 8_1:-9948958 Msa1177580:CDS
CAGTACGAGTTCTGACAAAA+TGG 0.359498 8_1:-9952033 Msa1177580:CDS
TCTTGAAAAGCATAAACAAT+AGG 0.362252 8_1:+9951960 None:intergenic
GCTTCGGTGATTCGCGGTGC+TGG 0.381981 8_1:+9949572 None:intergenic
CTCACCAACTAGTCTTGTTC+CGG 0.395990 8_1:-9947821 Msa1177580:three_prime_UTR
ATCTCCTACGACTGATTTCA+AGG 0.403632 8_1:+9948585 None:intergenic
GCAAATGCGAGGACTTTGTT+TGG 0.409693 8_1:-9948187 Msa1177580:CDS
CAAATGCGAGGACTTTGTTT+GGG 0.426350 8_1:-9948186 Msa1177580:CDS
GGTGACTAAGGATGAATTGA+TGG 0.429874 8_1:-9948165 Msa1177580:CDS
AAATGCTCCGATGGCTCATA+TGG 0.433853 8_1:-9948539 Msa1177580:CDS
CTTGAAAAGCATAAACAATA+GGG 0.439024 8_1:+9951961 None:intergenic
GGACTTTGTTTGGGTGACTA+AGG 0.440940 8_1:-9948177 Msa1177580:CDS
CAGGATGAAGATGACGTCAT+TGG 0.443350 8_1:-9952084 Msa1177580:CDS
AAATGAATGTAACAGTTTCT+GGG 0.475364 8_1:-9948033 Msa1177580:three_prime_UTR
TCTCTTTAGGTCACTACAAA+GGG 0.480712 8_1:-9948992 Msa1177580:intron
TGCCACACAGGCTTTCCACT+TGG 0.491497 8_1:+9948919 None:intergenic
TTTCAATGGCTAGGTTTCGA+TGG 0.497557 8_1:-9950409 Msa1177580:intron
AAGCATCACCATAGAGAAGA+AGG 0.501775 8_1:+9948950 None:intergenic
TGAAGATGACGTCATTGGTT+CGG 0.515441 8_1:-9952079 Msa1177580:CDS
TCTCTATGGTGATGCTTATG+GGG 0.516069 8_1:-9948944 Msa1177580:CDS
GACACCGGAACAAGACTAGT+TGG 0.520400 8_1:+9947817 None:intergenic
CAGTTTCTGGGATCAACAAA+AGG 0.522385 8_1:-9948021 Msa1177580:three_prime_UTR
GGATCTGTCTAGAAATTCAT+CGG 0.534929 8_1:+9950361 None:intergenic
GTCTCTTTAGGTCACTACAA+AGG 0.536519 8_1:-9948993 Msa1177580:intron
CGGCCGCTCTTGTCGAGACG+AGG 0.561533 8_1:-9952059 Msa1177580:CDS
GATCTGTCTAGAAATTCATC+GGG 0.564894 8_1:+9950362 None:intergenic
CAGCCTAAAGAAGAGCAGAC+AGG 0.565138 8_1:-9948511 Msa1177580:CDS
TTGTCTGCTTCGGTGATTCG+CGG 0.572285 8_1:+9949566 None:intergenic
GCTGTAATAATAACTTGTCA+TGG 0.596725 8_1:-9947909 Msa1177580:three_prime_UTR
TTCTAGACAGATCCGATGCA+AGG 0.596915 8_1:-9950352 Msa1177580:intron
CTCCAAGTGGAAAGCCTGTG+TGG 0.603277 8_1:-9948921 Msa1177580:CDS
TGAGTACCCATACCTTGCAT+CGG 0.607480 8_1:+9950340 None:intergenic
TTAGCTGATGACAGTGGAGA+TGG 0.612732 8_1:-9948100 Msa1177580:exon
CAATGGCTAGGTTTCGATGG+CGG 0.614979 8_1:-9950406 Msa1177580:intron
TGAACAACCATATGAGCCAT+CGG 0.625422 8_1:+9948532 None:intergenic
GAGCTAATAAGATATATCCA+TGG 0.628901 8_1:+9947841 None:intergenic
GCTGTTTGAGAGATTGCCTG+TGG 0.631922 8_1:-9952000 Msa1177580:CDS
CAGACAAACAAAATGATCGA+AGG 0.632787 8_1:-9949550 Msa1177580:intron
GTTCGACATTGGCAAATGCG+AGG 0.666005 8_1:-9948198 Msa1177580:CDS
TCTGCCTTGAAATCAGTCGT+AGG 0.676260 8_1:-9948589 Msa1177580:CDS
TGATCATTAGCTGATGACAG+TGG 0.681415 8_1:-9948106 Msa1177580:exon
GATGCTTATGGGGCTCCAAG+TGG 0.683285 8_1:-9948934 Msa1177580:CDS
AATCCTCGTCTCGACAAGAG+CGG 0.730653 8_1:+9952056 None:intergenic
GGTGGTTGAATGATAGAACA+TGG 0.747470 8_1:+9956273 None:intergenic
CAATCTCTCAAACAGCACAG+AGG 0.749554 8_1:+9952007 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTATATGTATTTTTTTTTT+GGG + chr8_1:9948418-9948437 None:intergenic 10.0%
!!! ACTTATATGTATTTTTTTTT+TGG + chr8_1:9948419-9948438 None:intergenic 10.0%
!! AATGAAAAATTAAATATACA+TGG + chr8_1:9949726-9949745 None:intergenic 10.0%
!!! TAAATTTTAAAACCAAAAAT+AGG + chr8_1:9950124-9950143 None:intergenic 10.0%
!!! ATAATATTTGTTAAAATTGA+CGG + chr8_1:9950497-9950516 None:intergenic 10.0%
!! AAAAAAAAATCAACAAAAAT+TGG - chr8_1:9951658-9951677 Msa1177580:intron 10.0%
!!! TTCTTATTATTTTAAATATC+GGG - chr8_1:9953078-9953097 Msa1177580:intron 10.0%
!!! TTTTAATATTTTTTCGTTTA+TGG - chr8_1:9954032-9954051 Msa1177580:intron 10.0%
!!! TTTAATATTTTTTCGTTTAT+GGG - chr8_1:9954033-9954052 Msa1177580:intron 10.0%
!! ACATTAATTCAACAATATAA+GGG + chr8_1:9948300-9948319 None:intergenic 15.0%
!! AACATTAATTCAACAATATA+AGG + chr8_1:9948301-9948320 None:intergenic 15.0%
!! ATAAAAATAATAATGCAGAA+AGG - chr8_1:9948490-9948509 Msa1177580:intron 15.0%
!!! GTTTTCTATTTCTTATTAAA+CGG - chr8_1:9948608-9948627 Msa1177580:intron 15.0%
!!! TTTTCTATTTCTTATTAAAC+GGG - chr8_1:9948609-9948628 Msa1177580:intron 15.0%
!!! AATTAAACAATTTTTGAAAG+AGG - chr8_1:9948929-9948948 Msa1177580:CDS 15.0%
!!! ATTAAACAATTTTTGAAAGA+GGG - chr8_1:9948930-9948949 Msa1177580:CDS 15.0%
!!! TGATTGAAATATTTTCAAAA+AGG + chr8_1:9949132-9949151 None:intergenic 15.0%
!!! TGTTATTTAAACTTCTTTTA+AGG + chr8_1:9949402-9949421 None:intergenic 15.0%
!! ATAATTGTCGTTAAAAAAAA+TGG - chr8_1:9949550-9949569 Msa1177580:intron 15.0%
!!! ATAGGATTTAATTTTGAAAA+GGG + chr8_1:9950106-9950125 None:intergenic 15.0%
!!! AATAGGATTTAATTTTGAAA+AGG + chr8_1:9950107-9950126 None:intergenic 15.0%
!!! TCAAAATTAAATCCTATTTT+TGG - chr8_1:9950109-9950128 Msa1177580:intron 15.0%
!! TATAAAAATATTGAAATGTG+AGG - chr8_1:9950178-9950197 Msa1177580:intron 15.0%
!! ATAAAAATATTGAAATGTGA+GGG - chr8_1:9950179-9950198 Msa1177580:intron 15.0%
!!! TCAGTTTTGAATTTTTTTTT+GGG + chr8_1:9951716-9951735 None:intergenic 15.0%
!!! TCAGTTTTGAATTTTTTTTT+TGG - chr8_1:9951716-9951735 Msa1177580:intron 15.0%
!!! CAGTTTTGAATTTTTTTTTT+GGG - chr8_1:9951717-9951736 Msa1177580:intron 15.0%
!!! TTCTTTTGTATTTTACAAAT+TGG + chr8_1:9952902-9952921 None:intergenic 15.0%
!!! AATACAAATTTTAACGAAAA+AGG - chr8_1:9952982-9953001 Msa1177580:intron 15.0%
!!! TCTTATTATTTTAAATATCG+GGG - chr8_1:9953079-9953098 Msa1177580:intron 15.0%
!!! ATTACCCTTTTATTAAAAAT+GGG + chr8_1:9953413-9953432 None:intergenic 15.0%
!!! TATTACCCTTTTATTAAAAA+TGG + chr8_1:9953414-9953433 None:intergenic 15.0%
!!! TTTTATAACTACGTTTTTTA+TGG - chr8_1:9953663-9953682 Msa1177580:intron 15.0%
!!! TTTATAACTACGTTTTTTAT+GGG - chr8_1:9953664-9953683 Msa1177580:intron 15.0%
!! AACACGATAAAAAATAATAA+AGG + chr8_1:9954834-9954853 None:intergenic 15.0%
!! AAAAATAAGTTTCAAAACAA+TGG + chr8_1:9956140-9956159 None:intergenic 15.0%
!!! ATTTTCAAACCTAATTTTCA+TGG + chr8_1:9947848-9947867 None:intergenic 20.0%
!! AATTAGGTTTGAAAATTGAA+AGG - chr8_1:9947852-9947871 Msa1177580:three_prime_UTR 20.0%
!! ATTAGGTTTGAAAATTGAAA+GGG - chr8_1:9947853-9947872 Msa1177580:three_prime_UTR 20.0%
!!! TTTTTTATTTTCAACGCTTA+GGG - chr8_1:9947988-9948007 Msa1177580:three_prime_UTR 20.0%
!!! TGGGAATATTTTTTTTAGAA+GGG + chr8_1:9948025-9948044 None:intergenic 20.0%
!! TGAAATTAAAGGGTAATAAT+GGG + chr8_1:9948240-9948259 None:intergenic 20.0%
!! AAACACATTTCAATTATTCT+CGG - chr8_1:9948680-9948699 Msa1177580:intron 20.0%
!!! TCTTTTTTAACAAAATTCCA+AGG - chr8_1:9948705-9948724 Msa1177580:intron 20.0%
!!! GAAAATATGAAAAAAGTGTT+TGG + chr8_1:9948746-9948765 None:intergenic 20.0%
!!! AAGTGTAAAGAGATTTTATA+TGG - chr8_1:9948894-9948913 Msa1177580:intron 20.0%
!!! TAAAGAGATTTTATATGGTT+AGG - chr8_1:9948899-9948918 Msa1177580:intron 20.0%
!!! AAAGAGATTTTATATGGTTA+GGG - chr8_1:9948900-9948919 Msa1177580:intron 20.0%
!! AAAAAAAACAAGATTGATTG+TGG + chr8_1:9949194-9949213 None:intergenic 20.0%
!! TGTAAGTTTGTCATAATTAT+AGG - chr8_1:9949898-9949917 Msa1177580:intron 20.0%
!!! TGCAAAAACAATTTTTTTTC+TGG - chr8_1:9950214-9950233 Msa1177580:intron 20.0%
!! TTTGCTTAAAAAAACTCATT+TGG - chr8_1:9950282-9950301 Msa1177580:intron 20.0%
!! AAAAAAAAAACTCCAGAAAA+GGG + chr8_1:9950615-9950634 None:intergenic 20.0%
!! AAAAAAAAAAACTCCAGAAA+AGG + chr8_1:9950616-9950635 None:intergenic 20.0%
!!! GTCAGTTTTGAATTTTTTTT+TGG + chr8_1:9951715-9951734 None:intergenic 20.0%
!! AATCAACAAAAATTGAAAGT+GGG + chr8_1:9950703-9950722 None:intergenic 20.0%
!! AAATCAACAAAAATTGAAAG+TGG + chr8_1:9950704-9950723 None:intergenic 20.0%
!! GTTTAGTGTTAAGAAAATAT+AGG + chr8_1:9951911-9951930 None:intergenic 20.0%
!!! AATAAAGCATCAAAGTAAAA+TGG - chr8_1:9952251-9952270 Msa1177580:intron 20.0%
!!! TTTCACGTTTAATTTAGTTT+TGG - chr8_1:9952281-9952300 Msa1177580:intron 20.0%
!! TTATTGAATAGTTGTAAGAT+CGG - chr8_1:9952452-9952471 Msa1177580:intron 20.0%
!!! CTTATTATTTTAAATATCGG+GGG - chr8_1:9953080-9953099 Msa1177580:intron 20.0%
!!! TAAAACTAATTTCGAGTTTA+AGG + chr8_1:9953128-9953147 None:intergenic 20.0%
!! GTAAAAATATATGAGAAAGA+GGG + chr8_1:9953271-9953290 None:intergenic 20.0%
!! TGTAAAAATATATGAGAAAG+AGG + chr8_1:9953272-9953291 None:intergenic 20.0%
!! TTCATACTAAAGAGAAAATA+AGG - chr8_1:9953335-9953354 Msa1177580:intron 20.0%
!!! TTACCCTTTTATTAAAAATG+GGG + chr8_1:9953412-9953431 None:intergenic 20.0%
!!! TTATAACTACGTTTTTTATG+GGG - chr8_1:9953665-9953684 Msa1177580:intron 20.0%
!! AAATATCAGTTACTTGTTTA+CGG + chr8_1:9954343-9954362 None:intergenic 20.0%
!!! TGAAATGAAACATTTTCTAA+TGG + chr8_1:9954610-9954629 None:intergenic 20.0%
!! AAATGTTTCATTTCAATTTC+TGG - chr8_1:9954615-9954634 Msa1177580:intron 20.0%
!!! TTTTACTATAGATGTTCTTA+TGG - chr8_1:9954776-9954795 Msa1177580:intron 20.0%
!! TCTATTATTATCTAAGAAAC+AGG + chr8_1:9954947-9954966 None:intergenic 20.0%
!! AAGATATATGAAATACAAAG+GGG + chr8_1:9955269-9955288 None:intergenic 20.0%
!! GAAGATATATGAAATACAAA+GGG + chr8_1:9955270-9955289 None:intergenic 20.0%
!! TTTGTATTTCATATATCTTC+CGG - chr8_1:9955270-9955289 Msa1177580:intron 20.0%
!! TACTGATAGAAATAACATAT+TGG + chr8_1:9955685-9955704 None:intergenic 20.0%
!!! ATAAATCAGAAGTATTGAAA+AGG + chr8_1:9955782-9955801 None:intergenic 20.0%
!! TCAAAATTCAATGAACTAAT+TGG + chr8_1:9956043-9956062 None:intergenic 20.0%
! AAAAAACCGTACAATAAGAA+AGG - chr8_1:9947926-9947945 Msa1177580:three_prime_UTR 25.0%
!!! CTTTTTTATTTTCAACGCTT+AGG - chr8_1:9947987-9948006 Msa1177580:three_prime_UTR 25.0%
!!! TTTTTATTTTCAACGCTTAG+GGG - chr8_1:9947989-9948008 Msa1177580:three_prime_UTR 25.0%
!!! CTGGGAATATTTTTTTTAGA+AGG + chr8_1:9948026-9948045 None:intergenic 25.0%
!! CTTCTAAAAAAAATATTCCC+AGG - chr8_1:9948024-9948043 Msa1177580:three_prime_UTR 25.0%
! GTGAAATTAAAGGGTAATAA+TGG + chr8_1:9948241-9948260 None:intergenic 25.0%
! GTACTCTATTATTTATACAC+TGG + chr8_1:9948381-9948400 None:intergenic 25.0%
! TTACTTTATTGTCTACATCA+TGG - chr8_1:9948438-9948457 Msa1177580:intron 25.0%
! AATAATAATGCAGAAAGGAT+CGG - chr8_1:9948495-9948514 Msa1177580:CDS 25.0%
! ATTCTACAAAGAAACATTCA+AGG + chr8_1:9948560-9948579 None:intergenic 25.0%
! TTTCCAGTTCATGTTTAATT+TGG - chr8_1:9948586-9948605 Msa1177580:CDS 25.0%
! AAACCAAATTAAACATGAAC+TGG + chr8_1:9948592-9948611 None:intergenic 25.0%
! GAGAATAATTGAAATGTGTT+TGG + chr8_1:9948681-9948700 None:intergenic 25.0%
!!! CACTTTTTTCATATTTTCCT+AGG - chr8_1:9948748-9948767 Msa1177580:intron 25.0%
! GACACAATATGAGATTTAAT+TGG + chr8_1:9949345-9949364 None:intergenic 25.0%
!!! GTGGTTTAATGTGAATTTTT+TGG - chr8_1:9949643-9949662 Msa1177580:intron 25.0%
! ATGAGAAAAATGATATAGAG+AGG + chr8_1:9949679-9949698 None:intergenic 25.0%
! TAAAAAAACTCATTTGGCAA+CGG - chr8_1:9950288-9950307 Msa1177580:intron 25.0%
! CGACGAATAAATTATTTGAT+TGG + chr8_1:9950529-9950548 None:intergenic 25.0%
!!! TGAATTTTTTTTTGGGAACA+GGG + chr8_1:9950644-9950663 None:intergenic 25.0%
!!! TTGAATTTTTTTTTGGGAAC+AGG + chr8_1:9950645-9950664 None:intergenic 25.0%
! TTTGGAAAATAAGTCTCATA+GGG + chr8_1:9951692-9951711 None:intergenic 25.0%
!!! TTTTGGAAAATAAGTCTCAT+AGG + chr8_1:9951691-9951710 None:intergenic 25.0%
! AAATCAACAAAAATTGGAAG+TGG - chr8_1:9951664-9951683 Msa1177580:intron 25.0%
! AATCAACAAAAATTGGAAGT+GGG - chr8_1:9951665-9951684 Msa1177580:intron 25.0%
!!! TTTTGGAAAATAAGTCTCAT+AGG - chr8_1:9951691-9951710 Msa1177580:intron 25.0%
! TTTGGAAAATAAGTCTCATA+GGG - chr8_1:9951692-9951711 Msa1177580:intron 25.0%
!!! TGAATTTTTTTTTTGGGAAC+AGG - chr8_1:9951723-9951742 Msa1177580:intron 25.0%
!!! GAATTTTTTTTTTGGGAACA+GGG - chr8_1:9951724-9951743 Msa1177580:intron 25.0%
! AAAAAGAGAAAACAGAAAAG+GGG + chr8_1:9951769-9951788 None:intergenic 25.0%
! GAAAAAGAGAAAACAGAAAA+GGG + chr8_1:9951770-9951789 None:intergenic 25.0%
! AGAAAAAGAGAAAACAGAAA+AGG + chr8_1:9951771-9951790 None:intergenic 25.0%
!! TTCTGTTTTCTCTTTTTCTT+TGG - chr8_1:9951772-9951791 Msa1177580:intron 25.0%
!! TCTGTTTTCTCTTTTTCTTT+GGG - chr8_1:9951773-9951792 Msa1177580:intron 25.0%
!!! ATTTGATTTCTGCACATTTT+CGG - chr8_1:9951847-9951866 Msa1177580:intron 25.0%
!!! TGATGTTTTTGAATTTGTTC+AGG - chr8_1:9951994-9952013 Msa1177580:CDS 25.0%
!! TAAACAATAGGGTCAATTTT+GGG + chr8_1:9952128-9952147 None:intergenic 25.0%
!! ATAAACAATAGGGTCAATTT+TGG + chr8_1:9952129-9952148 None:intergenic 25.0%
!! CTTGAAAAGCATAAACAATA+GGG + chr8_1:9952139-9952158 None:intergenic 25.0%
!! TCTTGAAAAGCATAAACAAT+AGG + chr8_1:9952140-9952159 None:intergenic 25.0%
! AACGTTGATCAAAATGATTA+TGG - chr8_1:9952358-9952377 Msa1177580:intron 25.0%
! ATGAAAATATTAGAGAGTTG+AGG - chr8_1:9952595-9952614 Msa1177580:intron 25.0%
! AGATTTGGAGATTAATGAAT+TGG - chr8_1:9952759-9952778 Msa1177580:intron 25.0%
! TAATGAATTGGACCAAAATA+TGG - chr8_1:9952771-9952790 Msa1177580:intron 25.0%
!! TTTTGCAGATATGCTTAAAA+AGG + chr8_1:9953193-9953212 None:intergenic 25.0%
! TAAGCATATCTGCAAAATAT+TGG - chr8_1:9953196-9953215 Msa1177580:intron 25.0%
! CAAAATATTGGATTCTCATT+GGG - chr8_1:9953208-9953227 Msa1177580:intron 25.0%
!! ATTTTCTCTTTAGTATGAAG+AGG + chr8_1:9953334-9953353 None:intergenic 25.0%
!!! TTGTCCCCATTTTTAATAAA+AGG - chr8_1:9953405-9953424 Msa1177580:intron 25.0%
!!! TGTCCCCATTTTTAATAAAA+GGG - chr8_1:9953406-9953425 Msa1177580:intron 25.0%
!! TTCTCTTTTCTCATTTAAGA+TGG - chr8_1:9953467-9953486 Msa1177580:intron 25.0%
!! CATTTAAGATGGAAAAAATG+AGG - chr8_1:9953478-9953497 Msa1177580:intron 25.0%
! TGCTGTTAATATTACATAGT+TGG - chr8_1:9953524-9953543 Msa1177580:intron 25.0%
!!! CATTGATTCATTTAAAAGAG+AGG - chr8_1:9953816-9953835 Msa1177580:intron 25.0%
! AACTAATAAACTTGAATAGC+CGG + chr8_1:9953981-9954000 None:intergenic 25.0%
!!! CACATTTCAATCTTTTTTGT+AGG + chr8_1:9954225-9954244 None:intergenic 25.0%
! AATATCAGTTACTTGTTTAC+GGG + chr8_1:9954342-9954361 None:intergenic 25.0%
! ATGAAAATTGTTTACTTTCC+AGG - chr8_1:9954472-9954491 Msa1177580:intron 25.0%
! TGAAAATTGTTTACTTTCCA+GGG - chr8_1:9954473-9954492 Msa1177580:intron 25.0%
! AAACCAAGCTAATAATTCAT+TGG + chr8_1:9954691-9954710 None:intergenic 25.0%
!!! GTGTTTTAGCTTTGTAATAT+TGG - chr8_1:9954849-9954868 Msa1177580:intron 25.0%
! ATTAGCAATGATAAAGCAAA+TGG + chr8_1:9955018-9955037 None:intergenic 25.0%
!!! TCTGATTCATATACTTTTTC+TGG + chr8_1:9955208-9955227 None:intergenic 25.0%
!! AGAAAAAGTATATGAATCAG+AGG - chr8_1:9955207-9955226 Msa1177580:intron 25.0%
! GGAAGATATATGAAATACAA+AGG + chr8_1:9955271-9955290 None:intergenic 25.0%
!! CTTTCGAATACATATTTTGT+CGG - chr8_1:9955535-9955554 Msa1177580:intron 25.0%
!!! ATCTTTTAAGGTATGCTTAT+AGG - chr8_1:9955615-9955634 Msa1177580:intron 25.0%
!!! TTATTTCTATCAGTATGTGT+TGG - chr8_1:9955690-9955709 Msa1177580:intron 25.0%
!!! TTTTCTGAAAATGACTTTGT+AGG - chr8_1:9955715-9955734 Msa1177580:intron 25.0%
!!! AGTATTGAAAAGGCTAATTT+TGG + chr8_1:9955772-9955791 None:intergenic 25.0%
! AAAATGAATGTAACAGTTTC+TGG - chr8_1:9956063-9956082 Msa1177580:intron 25.0%
! AAATGAATGTAACAGTTTCT+GGG - chr8_1:9956064-9956083 Msa1177580:intron 25.0%
ATTCAACCACCATGAAAATT+AGG - chr8_1:9947836-9947855 Msa1177580:three_prime_UTR 30.0%
! TTCAAACCTAATTTTCATGG+TGG + chr8_1:9947845-9947864 None:intergenic 30.0%
TTGAAAATTGAAAGGGTGAA+AGG - chr8_1:9947860-9947879 Msa1177580:three_prime_UTR 30.0%
!!! TTTTATTTTCAACGCTTAGG+GGG - chr8_1:9947990-9948009 Msa1177580:three_prime_UTR 30.0%
GAATTAAACATGCCTTTGTT+TGG - chr8_1:9948059-9948078 Msa1177580:three_prime_UTR 30.0%
AATAAAATTGAGGAGAACGT+GGG + chr8_1:9948152-9948171 None:intergenic 30.0%
ATCTCATGGGAATAAAATTG+AGG + chr8_1:9948162-9948181 None:intergenic 30.0%
! TCAATTTTATTCCCATGAGA+TGG - chr8_1:9948161-9948180 Msa1177580:CDS 30.0%
! CAATTTTATTCCCATGAGAT+GGG - chr8_1:9948162-9948181 Msa1177580:CDS 30.0%
! AATTTTATTCCCATGAGATG+GGG - chr8_1:9948163-9948182 Msa1177580:CDS 30.0%
GTTACGATGGTGAAATTAAA+GGG + chr8_1:9948250-9948269 None:intergenic 30.0%
TGTTACGATGGTGAAATTAA+AGG + chr8_1:9948251-9948270 None:intergenic 30.0%
AGTATCTTAGTATGTTACGA+TGG + chr8_1:9948263-9948282 None:intergenic 30.0%
ACTAAGATACTGAAATGATG+AGG - chr8_1:9948272-9948291 Msa1177580:intron 30.0%
ATGCATATGCTTTACGAAAA+TGG + chr8_1:9948472-9948491 None:intergenic 30.0%
TCTTATTAAACGGGCAAAAT+TGG - chr8_1:9948618-9948637 Msa1177580:intron 30.0%
!!! GGTTAAATAGTTTTGTTCCT+TGG + chr8_1:9948725-9948744 None:intergenic 30.0%
! AAGGTGTGATTTTTATTCCT+AGG + chr8_1:9948768-9948787 None:intergenic 30.0%
AAATCACACCTTTATATTCC+AGG - chr8_1:9948776-9948795 Msa1177580:intron 30.0%
AATCACACCTTTATATTCCA+GGG - chr8_1:9948777-9948796 Msa1177580:intron 30.0%
TATCTTTCCCTGGAATATAA+AGG + chr8_1:9948787-9948806 None:intergenic 30.0%
TCAACATGTATCAAGTCAAA+GGG + chr8_1:9949024-9949043 None:intergenic 30.0%
ATCAACATGTATCAAGTCAA+AGG + chr8_1:9949025-9949044 None:intergenic 30.0%
!! TTTGACTTGATACATGTTGA+TGG - chr8_1:9949024-9949043 Msa1177580:intron 30.0%
! TTGACTTGATACATGTTGAT+GGG - chr8_1:9949025-9949044 Msa1177580:intron 30.0%
!! AATGAAACTCATTGAGTTGA+TGG + chr8_1:9949373-9949392 None:intergenic 30.0%
ACAATTGTGAAATGCCTAAT+GGG - chr8_1:9949428-9949447 Msa1177580:intron 30.0%
TCGAGCTAAGAATAAAAAGT+TGG - chr8_1:9949466-9949485 Msa1177580:intron 30.0%
ATAAGAAAAATAGGGGTGAA+TGG + chr8_1:9949610-9949629 None:intergenic 30.0%
TTGGCGGAATAAGAAAAATA+GGG + chr8_1:9949618-9949637 None:intergenic 30.0%
TTTGGCGGAATAAGAAAAAT+AGG + chr8_1:9949619-9949638 None:intergenic 30.0%
! ATGATATAGAGAGGTGATTT+TGG + chr8_1:9949670-9949689 None:intergenic 30.0%
TTGGAAAATAAGTCTCATAG+GGG + chr8_1:9951693-9951712 None:intergenic 30.0%
! AAATTGAAAGTGGGTCATTT+TGG + chr8_1:9950694-9950713 None:intergenic 30.0%
CTACAGGACAAAACAAAAAA+CGG + chr8_1:9950908-9950927 None:intergenic 30.0%
! TCAATTTTCTGATACACTAC+AGG + chr8_1:9951127-9951146 None:intergenic 30.0%
! AATTTATATTTTCTCCCAGC+AGG + chr8_1:9951102-9951121 None:intergenic 30.0%
! TCAATTTTCTGATACACTAC+AGG - chr8_1:9951127-9951146 Msa1177580:intron 30.0%
CTACAGGACAAAACAAAATA+CGG - chr8_1:9951143-9951162 Msa1177580:intron 30.0%
AATTTATATTTGCTCCTAGC+AGG + chr8_1:9951260-9951279 None:intergenic 30.0%
! TCAATTTTCTGATACACTAC+AGG - chr8_1:9951127-9951146 Msa1177580:intron 30.0%
CTACAGGACAAAACAAAATA+CGG - chr8_1:9951143-9951162 Msa1177580:intron 30.0%
AATTTATATTTGCTCCTAGC+AGG + chr8_1:9951260-9951279 None:intergenic 30.0%
! TCAATTTTCTGATACACTAC+AGG - chr8_1:9951127-9951146 Msa1177580:intron 30.0%
CTACAGGACAAAACAAAATA+CGG - chr8_1:9951143-9951162 Msa1177580:intron 30.0%
TTGGAAAATAAGTCTCATAG+GGG - chr8_1:9951693-9951712 Msa1177580:intron 30.0%
AAATGTGCAGAAATCAAATG+AGG + chr8_1:9951846-9951865 None:intergenic 30.0%
TAAACAAACCTCACGAAAAT+AGG - chr8_1:9951926-9951945 Msa1177580:intron 30.0%
! ATTTTGTTCCTATTTTCGTG+AGG + chr8_1:9951937-9951956 None:intergenic 30.0%
CGAAAATAGGAACAAAATCA+CGG - chr8_1:9951939-9951958 Msa1177580:intron 30.0%
! TTTTATTACTATGCTCTGCT+TGG - chr8_1:9952215-9952234 Msa1177580:intron 30.0%
TTTATTACTATGCTCTGCTT+GGG - chr8_1:9952216-9952235 Msa1177580:intron 30.0%
GTTGATCAAAATGATTATGG+TGG - chr8_1:9952361-9952380 Msa1177580:intron 30.0%
AATGATTATGGTGGTTGAAA+TGG - chr8_1:9952370-9952389 Msa1177580:intron 30.0%
!!! CGTTGATTTTATTCTCATGT+TGG + chr8_1:9952515-9952534 None:intergenic 30.0%
TGAGAATAAAATCAACGTAG+CGG - chr8_1:9952518-9952537 Msa1177580:intron 30.0%
!! TAGAAAAGATGGTGGATAAT+AGG - chr8_1:9952630-9952649 Msa1177580:intron 30.0%
! GACCTATAGATTTTGTAGTA+TGG - chr8_1:9952681-9952700 Msa1177580:intron 30.0%
CTCCATACTACAAAATCTAT+AGG + chr8_1:9952686-9952705 None:intergenic 30.0%
ATGGAGAGTAGATTAAATGA+AGG - chr8_1:9952700-9952719 Msa1177580:intron 30.0%
GTTGTTGCTAATACAATTTC+AGG - chr8_1:9952867-9952886 Msa1177580:intron 30.0%
AATATCGGGGGATATATATA+CGG - chr8_1:9953092-9953111 Msa1177580:intron 30.0%
!! CTAATTTCGAGTTTAAGGTT+TGG + chr8_1:9953123-9953142 None:intergenic 30.0%
GCAAAATATTGGATTCTCAT+TGG - chr8_1:9953207-9953226 Msa1177580:intron 30.0%
GGTGTAAAAATAGTTTACAC+TGG - chr8_1:9953235-9953254 Msa1177580:intron 30.0%
! GTATGAAGAGGTGTAAATAT+GGG + chr8_1:9953322-9953341 None:intergenic 30.0%
! AGTATGAAGAGGTGTAAATA+TGG + chr8_1:9953323-9953342 None:intergenic 30.0%
AAATAAGGAAACTTGTCTTC+TGG - chr8_1:9953350-9953369 Msa1177580:intron 30.0%
CTTATGTCTTCAGTGAAATT+TGG - chr8_1:9953381-9953400 Msa1177580:intron 30.0%
! AGGTTAATGTCTGAAACATA+AGG - chr8_1:9953498-9953517 Msa1177580:intron 30.0%
! GGTTAATGTCTGAAACATAA+GGG - chr8_1:9953499-9953518 Msa1177580:intron 30.0%
AAGTACAACAAACAACAGAA+GGG + chr8_1:9953615-9953634 None:intergenic 30.0%
TGTACTTCTAACTGATATTG+TGG - chr8_1:9953628-9953647 Msa1177580:intron 30.0%
CATTTCTGTCATCACTTAAA+CGG + chr8_1:9953856-9953875 None:intergenic 30.0%
!!! TTTTTTCGTTTATGGGTTGA+TGG - chr8_1:9954040-9954059 Msa1177580:intron 30.0%
! ATATTTTATGAAGAGTGACG+TGG - chr8_1:9954357-9954376 Msa1177580:intron 30.0%
AGATGAAAAGAAGGATCTAT+TGG + chr8_1:9954446-9954465 None:intergenic 30.0%
CATGATAGTAGATGAAAAGA+AGG + chr8_1:9954455-9954474 None:intergenic 30.0%
GAAAATTGTTTACTTTCCAG+GGG - chr8_1:9954474-9954493 Msa1177580:intron 30.0%
AAAATTGTTTACTTTCCAGG+GGG - chr8_1:9954475-9954494 Msa1177580:intron 30.0%
!! ATCATTTTGTTTGTCTGCTT+CGG + chr8_1:9954544-9954563 None:intergenic 30.0%
AAATGATCAGTCTGCTAAAT+TGG + chr8_1:9954579-9954598 None:intergenic 30.0%
TCTCCAATGAATTATTAGCT+TGG - chr8_1:9954685-9954704 Msa1177580:intron 30.0%
TAAAACCACACCAAAGAAAA+AGG + chr8_1:9954753-9954772 None:intergenic 30.0%
ACTATAGATGTTCTTATGGA+AGG - chr8_1:9954780-9954799 Msa1177580:intron 30.0%
CTGAGAAATATATCAATGTG+AGG - chr8_1:9954901-9954920 Msa1177580:intron 30.0%
AAATATATCAATGTGAGGAC+AGG - chr8_1:9954906-9954925 Msa1177580:intron 30.0%
GTAAGGTGAACATTCTTATA+TGG - chr8_1:9955239-9955258 Msa1177580:intron 30.0%
CTATAGTTATATCATCGCTA+AGG + chr8_1:9955312-9955331 None:intergenic 30.0%
TATGCTTATAGGAATTTGTG+TGG - chr8_1:9955626-9955645 Msa1177580:intron 30.0%
TACTTCAATCTACTATTGGA+AGG - chr8_1:9955649-9955668 Msa1177580:intron 30.0%
! ACTTCTGATTTATTTCTCTG+TGG - chr8_1:9955789-9955808 Msa1177580:intron 30.0%
! GCTGTAATAATAACTTGTCA+TGG - chr8_1:9956188-9956207 Msa1177580:intron 30.0%
! AATTTTGTAGTTGTTGTCCA+TGG - chr8_1:9956239-9956258 Msa1177580:intron 30.0%
GAGCTAATAAGATATATCCA+TGG + chr8_1:9956259-9956278 None:intergenic 30.0%
GAGCAATAGTGTATTGAAGA+TGG - chr8_1:9947882-9947901 Msa1177580:three_prime_UTR 35.0%
AAACCGTACAATAAGAAAGG+TGG - chr8_1:9947929-9947948 Msa1177580:three_prime_UTR 35.0%
AACCGTACAATAAGAAAGGT+GGG - chr8_1:9947930-9947949 Msa1177580:three_prime_UTR 35.0%
TTCCCACCTTTCTTATTGTA+CGG + chr8_1:9947935-9947954 None:intergenic 35.0%
AATTCCAACGTAAGAATCCT+GGG + chr8_1:9948044-9948063 None:intergenic 35.0%
TAATTCCAACGTAAGAATCC+TGG + chr8_1:9948045-9948064 None:intergenic 35.0%
TGTTCCTATCTACCAAACAA+AGG + chr8_1:9948074-9948093 None:intergenic 35.0%
AGGAACAAAAAAATAAGCCC+AGG - chr8_1:9948087-9948106 Msa1177580:three_prime_UTR 35.0%
CCTGGGAATTATTTATTCCT+GGG + chr8_1:9948107-9948126 None:intergenic 35.0%
TCCTGGGAATTATTTATTCC+TGG + chr8_1:9948108-9948127 None:intergenic 35.0%
GAATAAAATTGAGGAGAACG+TGG + chr8_1:9948153-9948172 None:intergenic 35.0%
! GGTTGGGAAAATTTTATTCC+CGG - chr8_1:9948184-9948203 Msa1177580:CDS 35.0%
CATTTCAGATCATGGGTTTA+TGG + chr8_1:9948213-9948232 None:intergenic 35.0%
! GGGTTTTCATTTCAGATCAT+GGG + chr8_1:9948220-9948239 None:intergenic 35.0%
! TGGGTTTTCATTTCAGATCA+TGG + chr8_1:9948221-9948240 None:intergenic 35.0%
TATTGTCTACATCATGGACT+AGG - chr8_1:9948444-9948463 Msa1177580:intron 35.0%
GGATTGACATCATTTACATG+TGG - chr8_1:9948516-9948535 Msa1177580:CDS 35.0%
GAATTACATCATTCATTCCC+AGG - chr8_1:9948640-9948659 Msa1177580:intron 35.0%
TGGATACACAATTTATTCCC+AGG + chr8_1:9948813-9948832 None:intergenic 35.0%
CTTTGACACACATCAACTAA+GGG + chr8_1:9948849-9948868 None:intergenic 35.0%
TCTTTGACACACATCAACTA+AGG + chr8_1:9948850-9948869 None:intergenic 35.0%
TCAAAGGGCAAACAATTCAA+TGG + chr8_1:9949009-9949028 None:intergenic 35.0%
ACAAACTTGTATTTGCAGTG+GGG + chr8_1:9949060-9949079 None:intergenic 35.0%
CACAAACTTGTATTTGCAGT+GGG + chr8_1:9949061-9949080 None:intergenic 35.0%
ACACAAACTTGTATTTGCAG+TGG + chr8_1:9949062-9949081 None:intergenic 35.0%
GACAATTGTGAAATGCCTAA+TGG - chr8_1:9949427-9949446 Msa1177580:intron 35.0%
TGGCGGAATAAGAAAAATAG+GGG + chr8_1:9949617-9949636 None:intergenic 35.0%
! TTTTCTTATTCCGCCAAAGA+TGG - chr8_1:9949621-9949640 Msa1177580:intron 35.0%
TCACATTAAACCACCATCTT+TGG + chr8_1:9949637-9949656 None:intergenic 35.0%
AACGAACATTGCAATGATTC+AGG + chr8_1:9949780-9949799 None:intergenic 35.0%
ATAAACATCAAGTCAGTGCA+AGG - chr8_1:9949816-9949835 Msa1177580:intron 35.0%
! ATGTAGTGTAAACCCTTTTC+TGG - chr8_1:9950600-9950619 Msa1177580:intron 35.0%
TGGAAAATAAGTCTCATAGG+GGG + chr8_1:9951694-9951713 None:intergenic 35.0%
AATTTATATTTGCTCCCAGC+AGG - chr8_1:9950951-9950970 Msa1177580:intron 35.0%
!!! GCGCGCTTTGAATTTTTTTT+GGG + chr8_1:9951226-9951245 None:intergenic 35.0%
! AAATTGGAAGTGGGTCATTT+TGG - chr8_1:9951674-9951693 Msa1177580:intron 35.0%
ATAGGTTTCAGAATCATACC+TGG + chr8_1:9951893-9951912 None:intergenic 35.0%
!! TCAATTTTGGGAATAACCAC+AGG + chr8_1:9952116-9952135 None:intergenic 35.0%
!! TGATACAAAAGTACCACTCA+TGG - chr8_1:9952416-9952435 Msa1177580:intron 35.0%
AGCACCTATAGTAGAAAAGA+TGG - chr8_1:9952619-9952638 Msa1177580:intron 35.0%
ACCTATAGTAGAAAAGATGG+TGG - chr8_1:9952622-9952641 Msa1177580:intron 35.0%
! TCCACCATCTTTTCTACTAT+AGG + chr8_1:9952626-9952645 None:intergenic 35.0%
! ATAATAGGCTTAGGTGGTTT+TGG - chr8_1:9952645-9952664 Msa1177580:intron 35.0%
! AACCAATGCTCACAATTTTG+AGG - chr8_1:9952928-9952947 Msa1177580:intron 35.0%
! AAAAAGGTCTGTTGCTATTG+TGG - chr8_1:9952998-9953017 Msa1177580:intron 35.0%
! AAAAGGTCTGTTGCTATTGT+GGG - chr8_1:9952999-9953018 Msa1177580:intron 35.0%
TGCAGATATGCTTAAAAAGG+CGG + chr8_1:9953190-9953209 None:intergenic 35.0%
!! CATAGTTGGTAATTGTGCTA+TGG - chr8_1:9953538-9953557 Msa1177580:intron 35.0%
GAAGTACAACAAACAACAGA+AGG + chr8_1:9953616-9953635 None:intergenic 35.0%
!!! CGTTTTTTATGGGGTTTCAA+TGG - chr8_1:9953674-9953693 Msa1177580:intron 35.0%
GATCTGTCTAGAAATTCATC+GGG + chr8_1:9953738-9953757 None:intergenic 35.0%
GGATCTGTCTAGAAATTCAT+CGG + chr8_1:9953739-9953758 None:intergenic 35.0%
CGTTTAAGTGATGACAGAAA+TGG - chr8_1:9953854-9953873 Msa1177580:intron 35.0%
! TTGGTAGTAGCATTTCTCAT+CGG + chr8_1:9953887-9953906 None:intergenic 35.0%
AAAATAAAGCAGCAGAAACG+TGG + chr8_1:9953952-9953971 None:intergenic 35.0%
!!! CGTTTCTGCTGCTTTATTTT+TGG - chr8_1:9953952-9953971 Msa1177580:intron 35.0%
TGAACACACACTCATTTGAT+AGG + chr8_1:9954383-9954402 None:intergenic 35.0%
TCAAATGAGTGTGTGTTCAT+AGG - chr8_1:9954384-9954403 Msa1177580:intron 35.0%
AGAGGATATAGACAAAAGCT+TGG + chr8_1:9954417-9954436 None:intergenic 35.0%
AGGATCTATTGGTATTTGAG+AGG + chr8_1:9954435-9954454 None:intergenic 35.0%
CAGACAAACAAAATGATCGA+AGG - chr8_1:9954547-9954566 Msa1177580:intron 35.0%
! GAGCAAATGTCCTTTTTCTT+TGG - chr8_1:9954740-9954759 Msa1177580:intron 35.0%
! AATGTCCTTTTTCTTTGGTG+TGG - chr8_1:9954745-9954764 Msa1177580:intron 35.0%
TCTCTTTAGGTCACTACAAA+GGG - chr8_1:9955105-9955124 Msa1177580:intron 35.0%
AGACTTTACCTTCTTCTCTA+TGG - chr8_1:9955139-9955158 Msa1177580:intron 35.0%
! TTCTCTATGGTGATGCTTAT+GGG - chr8_1:9955152-9955171 Msa1177580:intron 35.0%
TCGTCAAATAGTTGCTATAG+TGG - chr8_1:9955395-9955414 Msa1177580:intron 35.0%
CAACATGCACTATGCAATAA+AGG + chr8_1:9955435-9955454 None:intergenic 35.0%
! GACAGGATCAACATCTTTTA+AGG - chr8_1:9955603-9955622 Msa1177580:intron 35.0%
GTGGTACTTCAATCTACTAT+TGG - chr8_1:9955645-9955664 Msa1177580:intron 35.0%
TGTACAACCAAACAAAGCAA+AGG + chr8_1:9955741-9955760 None:intergenic 35.0%
GCTAAAAACAAGTTCGACAT+TGG - chr8_1:9955888-9955907 Msa1177580:intron 35.0%
! TTTAAAAACTCAGCTTGCTC+AGG + chr8_1:9955966-9955985 None:intergenic 35.0%
!!! GAAAGTGTTATTTTGGACAC+CGG + chr8_1:9956298-9956317 None:intergenic 35.0%
GGTGGTTGAATGATAGAACA+TGG + chr8_1:9947827-9947846 None:intergenic 40.0%
GTACAATAAGAAAGGTGGGA+AGG - chr8_1:9947934-9947953 Msa1177580:three_prime_UTR 40.0%
TATTCCCAGGATTCTTACGT+TGG - chr8_1:9948037-9948056 Msa1177580:three_prime_UTR 40.0%
! CATGCCTTTGTTTGGTAGAT+AGG - chr8_1:9948067-9948086 Msa1177580:three_prime_UTR 40.0%
CCCAGGAATAAATAATTCCC+AGG - chr8_1:9948104-9948123 Msa1177580:exon 40.0%
!! ATGGGTGTTTTTGTGTTCCT+GGG + chr8_1:9948124-9948143 None:intergenic 40.0%
ATCATGGGTTTATGGTTACC+GGG + chr8_1:9948205-9948224 None:intergenic 40.0%
GATCATGGGTTTATGGTTAC+CGG + chr8_1:9948206-9948225 None:intergenic 40.0%
GGATTGCAAAATCTGTTCCT+GGG + chr8_1:9948660-9948679 None:intergenic 40.0%
TGGATTGCAAAATCTGTTCC+TGG + chr8_1:9948661-9948680 None:intergenic 40.0%
TTCCAGGGAAAGATAATTCC+TGG - chr8_1:9948792-9948811 Msa1177580:intron 40.0%
TCCAGGGAAAGATAATTCCT+GGG - chr8_1:9948793-9948812 Msa1177580:intron 40.0%
! TACATGTTGATGGGAGTGAA+AGG - chr8_1:9949034-9949053 Msa1177580:intron 40.0%
TGAAATGCCTAATGGGAGAT+TGG - chr8_1:9949435-9949454 Msa1177580:intron 40.0%
GAAATGCCTAATGGGAGATT+GGG - chr8_1:9949436-9949455 Msa1177580:intron 40.0%
CATATACCCAATCTCCCATT+AGG + chr8_1:9949445-9949464 None:intergenic 40.0%
AGAAAAATAGGGGTGAATGG+AGG + chr8_1:9949607-9949626 None:intergenic 40.0%
CATTAAACCACCATCTTTGG+CGG + chr8_1:9949634-9949653 None:intergenic 40.0%
CTACATCAACGACTCTTGTT+TGG + chr8_1:9950586-9950605 None:intergenic 40.0%
AAAAAAATTCAAAGCGCGCC+TGG - chr8_1:9951227-9951246 Msa1177580:intron 40.0%
!!! GGCGCGCTTTGAATTTTTTT+TGG + chr8_1:9951227-9951246 None:intergenic 40.0%
AAAAAAATTCAAAGCGCGCC+TGG - chr8_1:9951227-9951246 Msa1177580:intron 40.0%
CTCATTCCCGCTATTTGAAA+CGG + chr8_1:9951626-9951645 None:intergenic 40.0%
TTCAGAATCATACCTGGAAG+AGG + chr8_1:9951887-9951906 None:intergenic 40.0%
! TGAAGATGACGTCATTGGTT+CGG - chr8_1:9952018-9952037 Msa1177580:CDS 40.0%
! CAGTACGAGTTCTGACAAAA+TGG - chr8_1:9952064-9952083 Msa1177580:CDS 40.0%
!! TACAAAAGTACCACTCATGG+TGG - chr8_1:9952419-9952438 Msa1177580:intron 40.0%
TGTTGTATGGAACTGAGTGT+TGG - chr8_1:9952478-9952497 Msa1177580:intron 40.0%
GTTGTATGGAACTGAGTGTT+GGG - chr8_1:9952479-9952498 Msa1177580:intron 40.0%
GTGGTAAGACTAGATAGGAT+AGG - chr8_1:9952565-9952584 Msa1177580:intron 40.0%
!! AGATGGTGGATAATAGGCTT+AGG - chr8_1:9952636-9952655 Msa1177580:intron 40.0%
AAGGATAGTCAAATCCCTTG+AGG - chr8_1:9952719-9952738 Msa1177580:intron 40.0%
!! GAGGGCATTTAGGAAAGATT+TGG - chr8_1:9952744-9952763 Msa1177580:intron 40.0%
!! CGTAAGTTGATCTATGTAGC+CGG - chr8_1:9952814-9952833 Msa1177580:intron 40.0%
GTCCTCAAAATTGTGAGCAT+TGG + chr8_1:9952933-9952952 None:intergenic 40.0%
TGTGGGCAATAGAAAATGAC+AGG - chr8_1:9953016-9953035 Msa1177580:intron 40.0%
TTAAAAAGGCGGCTACAAAG+TGG + chr8_1:9953179-9953198 None:intergenic 40.0%
ATTGGATTCTCATTGGGCTT+CGG - chr8_1:9953214-9953233 Msa1177580:intron 40.0%
ATGAGAAAGAGGGATATGCA+CGG + chr8_1:9953261-9953280 None:intergenic 40.0%
TTTATGGGGTTTCAATGGCT+AGG - chr8_1:9953679-9953698 Msa1177580:intron 40.0%
TTTCAATGGCTAGGTTTCGA+TGG - chr8_1:9953688-9953707 Msa1177580:intron 40.0%
!!! GCTGCTTTATTTTTGGCTAC+CGG - chr8_1:9953959-9953978 Msa1177580:intron 40.0%
!! GGTTGATGGTTGTAAAGATG+AGG - chr8_1:9954054-9954073 Msa1177580:intron 40.0%
TGGTTGTAAAGATGAGGAAG+AGG - chr8_1:9954060-9954079 Msa1177580:intron 40.0%
! TAAAGATGAGGAAGAGGTGT+TGG - chr8_1:9954066-9954085 Msa1177580:intron 40.0%
TTGGCTGTATAGTTGAAGGA+TGG - chr8_1:9954085-9954104 Msa1177580:intron 40.0%
GTATAGTTGAAGGATGGTGA+TGG - chr8_1:9954091-9954110 Msa1177580:intron 40.0%
!! GGTTTAGATGGAGGTTTTGA+TGG - chr8_1:9954115-9954134 Msa1177580:intron 40.0%
!! GATGGAGGTTTTGATGGATA+TGG - chr8_1:9954121-9954140 Msa1177580:intron 40.0%
! TGATGGATATGGCAGGTATT+CGG - chr8_1:9954132-9954151 Msa1177580:intron 40.0%
TATCAATGTGAGGACAGGAT+AGG - chr8_1:9954911-9954930 Msa1177580:intron 40.0%
! TCTAAGAAACAGGAGAGCAT+TGG + chr8_1:9954937-9954956 None:intergenic 40.0%
CTTCAGAGATTATTGCTGTG+TGG - chr8_1:9955060-9955079 Msa1177580:intron 40.0%
! CTCTTGCTACTTGTCTCTTT+AGG - chr8_1:9955092-9955111 Msa1177580:intron 40.0%
GTCTCTTTAGGTCACTACAA+AGG - chr8_1:9955104-9955123 Msa1177580:intron 40.0%
AAGCATCACCATAGAGAAGA+AGG + chr8_1:9955150-9955169 None:intergenic 40.0%
! CTTCTCTATGGTGATGCTTA+TGG - chr8_1:9955151-9955170 Msa1177580:intron 40.0%
! TCTCTATGGTGATGCTTATG+GGG - chr8_1:9955153-9955172 Msa1177580:intron 40.0%
!! TTTTCTGGAAAATGCCACAC+AGG + chr8_1:9955193-9955212 None:intergenic 40.0%
ATCAGAGGATACTATGCGTA+AGG - chr8_1:9955222-9955241 Msa1177580:intron 40.0%
!! CTTCCGGTGTTGTTAAATAG+CGG - chr8_1:9955286-9955305 Msa1177580:intron 40.0%
! ATCTCCTACGACTGATTTCA+AGG + chr8_1:9955515-9955534 None:intergenic 40.0%
TGAACAACCATATGAGCCAT+CGG + chr8_1:9955568-9955587 None:intergenic 40.0%
! TTGTAGGCCTTTGCTTTGTT+TGG - chr8_1:9955731-9955750 Msa1177580:intron 40.0%
CTGACAGAAGATTTCAGCAA+AGG + chr8_1:9955841-9955860 None:intergenic 40.0%
! CAAATGCGAGGACTTTGTTT+GGG - chr8_1:9955911-9955930 Msa1177580:intron 40.0%
GGTGACTAAGGATGAATTGA+TGG - chr8_1:9955932-9955951 Msa1177580:intron 40.0%
TGATCATTAGCTGATGACAG+TGG - chr8_1:9955991-9956010 Msa1177580:intron 40.0%
!! CAGTTTCTGGGATCAACAAA+AGG - chr8_1:9956076-9956095 Msa1177580:intron 40.0%
CAATAAGAAAGGTGGGAAGG+AGG - chr8_1:9947937-9947956 Msa1177580:three_prime_UTR 45.0%
!! CATGGGTGTTTTTGTGTTCC+TGG + chr8_1:9948125-9948144 None:intergenic 45.0%
AGGAGAACGTGGGTAAACAT+GGG + chr8_1:9948142-9948161 None:intergenic 45.0%
TTATTCCCATGAGATGGGGT+TGG - chr8_1:9948167-9948186 Msa1177580:CDS 45.0%
TATTCCCATGAGATGGGGTT+GGG - chr8_1:9948168-9948187 Msa1177580:CDS 45.0%
! TTTTCCCAACCCCATCTCAT+GGG + chr8_1:9948175-9948194 None:intergenic 45.0%
! ATTTTCCCAACCCCATCTCA+TGG + chr8_1:9948176-9948195 None:intergenic 45.0%
TCCCAGGAATTATCTTTCCC+TGG + chr8_1:9948797-9948816 None:intergenic 45.0%
! CTAAGGGTGCGTTTGTTTCA+TGG + chr8_1:9948833-9948852 None:intergenic 45.0%
AAAATAGGGGTGAATGGAGG+TGG + chr8_1:9949604-9949623 None:intergenic 45.0%
TCTTATTCCGCCAAAGATGG+TGG - chr8_1:9949624-9949643 Msa1177580:intron 45.0%
CTCATTCCCGCCATTTGAAA+CGG - chr8_1:9950739-9950758 Msa1177580:intron 45.0%
ATGTGACATGTGTCAGATGG+CGG + chr8_1:9951590-9951609 None:intergenic 45.0%
ACGATGTGACATGTGTCAGA+TGG + chr8_1:9951587-9951606 None:intergenic 45.0%
GACACATGTCACATCGTTAC+TGG - chr8_1:9950781-9950800 Msa1177580:intron 45.0%
TTCATTCCCGCCGTTTGAAA+TGG + chr8_1:9951195-9951214 None:intergenic 45.0%
TTCATTCCCGCCGTTTGAAA+TGG - chr8_1:9951195-9951214 Msa1177580:intron 45.0%
TTCAGTCCCGCCATTTCAAA+CGG + chr8_1:9951208-9951227 None:intergenic 45.0%
TTCATTCCCGCCGTTTGAAA+TGG - chr8_1:9951195-9951214 Msa1177580:intron 45.0%
TTCATTCCCGCCGTTTGAAA+TGG - chr8_1:9951195-9951214 Msa1177580:intron 45.0%
GACACATGTCACATCGTTAC+TGG + chr8_1:9950781-9950800 None:intergenic 45.0%
ACGATGTGACATGTGTCAGA+TGG - chr8_1:9951587-9951606 Msa1177580:intron 45.0%
ATGTGACATGTGTCAGATGG+CGG - chr8_1:9951590-9951609 Msa1177580:intron 45.0%
ATTCCCGCCGTTTCAAATAG+CGG - chr8_1:9951616-9951635 Msa1177580:intron 45.0%
! ATTCCCGCTATTTGAAACGG+CGG + chr8_1:9951623-9951642 None:intergenic 45.0%
! CGTTTCAAATAGCGGGAATG+AGG - chr8_1:9951624-9951643 Msa1177580:intron 45.0%
TGTAGAGCGACTACAGTGAA+GGG + chr8_1:9951813-9951832 None:intergenic 45.0%
CAGGATGAAGATGACGTCAT+TGG - chr8_1:9952013-9952032 Msa1177580:CDS 45.0%
CAATCTCTCAAACAGCACAG+AGG + chr8_1:9952093-9952112 None:intergenic 45.0%
TGCTCTGCTTGGGTTTGAAT+TGG - chr8_1:9952226-9952245 Msa1177580:intron 45.0%
!! AAAAGTACCACTCATGGTGG+AGG - chr8_1:9952422-9952441 Msa1177580:intron 45.0%
! AAAGTACCACTCATGGTGGA+GGG - chr8_1:9952423-9952442 Msa1177580:intron 45.0%
GTAAGATCGGCGATGTTGTA+TGG - chr8_1:9952465-9952484 Msa1177580:intron 45.0%
GACGTGTGGTAAGACTAGAT+AGG - chr8_1:9952560-9952579 Msa1177580:intron 45.0%
! TGGTGGATAATAGGCTTAGG+TGG - chr8_1:9952639-9952658 Msa1177580:intron 45.0%
! CAATCAAGCCTTTTCCGACT+AGG + chr8_1:9952845-9952864 None:intergenic 45.0%
TACGGCATGAGTAGACAAAC+TGG + chr8_1:9952955-9952974 None:intergenic 45.0%
!! GTATTCAGCTCTAGCTTGCT+TGG + chr8_1:9953300-9953319 None:intergenic 45.0%
TTCTAGACAGATCCGATGCA+AGG - chr8_1:9953745-9953764 Msa1177580:intron 45.0%
ACAGATCCGATGCAAGGTAT+GGG - chr8_1:9953751-9953770 Msa1177580:intron 45.0%
TGAGTACCCATACCTTGCAT+CGG + chr8_1:9953760-9953779 None:intergenic 45.0%
AGGTATGGGTACTCAAGAGT+AGG - chr8_1:9953765-9953784 Msa1177580:intron 45.0%
!! GGTGTTGGCTGTATAGTTGA+AGG - chr8_1:9954081-9954100 Msa1177580:intron 45.0%
!! TAGTTGAAGGATGGTGATGG+TGG - chr8_1:9954094-9954113 Msa1177580:intron 45.0%
!! GATGGTGATGGTGGTTTAGA+TGG - chr8_1:9954103-9954122 Msa1177580:intron 45.0%
!! GAGGTTTTGATGGATATGGC+AGG - chr8_1:9954125-9954144 Msa1177580:intron 45.0%
GATGGATATGGCAGGTATTC+GGG - chr8_1:9954133-9954152 Msa1177580:intron 45.0%
! TCGCTGGATGAAGGTTTTCA+TGG - chr8_1:9954188-9954207 Msa1177580:intron 45.0%
TGTTTACTTTCCAGGGGGAA+AGG - chr8_1:9954480-9954499 Msa1177580:intron 45.0%
ATGCTGTCCTCATCTTCCTT+TGG - chr8_1:9954714-9954733 Msa1177580:intron 45.0%
AGGCCGCTATTTAACAACAC+CGG + chr8_1:9955292-9955311 None:intergenic 45.0%
TCTGCCTTGAAATCAGTCGT+AGG - chr8_1:9955508-9955527 Msa1177580:intron 45.0%
! TTTTGTCGGAAATGCTCCGA+TGG - chr8_1:9955549-9955568 Msa1177580:intron 45.0%
AAATGCTCCGATGGCTCATA+TGG - chr8_1:9955558-9955577 Msa1177580:intron 45.0%
GATCCTGTCTGCTCTTCTTT+AGG + chr8_1:9955592-9955611 None:intergenic 45.0%
GCAAATGCGAGGACTTTGTT+TGG - chr8_1:9955910-9955929 Msa1177580:intron 45.0%
! GGACTTTGTTTGGGTGACTA+AGG - chr8_1:9955920-9955939 Msa1177580:intron 45.0%
TTAGCTGATGACAGTGGAGA+TGG - chr8_1:9955997-9956016 Msa1177580:intron 45.0%
!! CTCACCAACTAGTCTTGTTC+CGG - chr8_1:9956276-9956295 Msa1177580:CDS 45.0%
!!! TTTTTTTGAATATTTTTTTT+CGG - chr8_1:9950824-9950843 Msa1177580:intron 5.0%
!!! TTTTTTTGAATATTTTTTTT+CGG + chr8_1:9950824-9950843 None:intergenic 5.0%
!! AAATTTGTATTAATTTATTA+CGG + chr8_1:9952973-9952992 None:intergenic 5.0%
!!! ATTCTTATTATTTTAAATAT+CGG - chr8_1:9953077-9953096 Msa1177580:intron 5.0%
GAGGAGAACGTGGGTAAACA+TGG + chr8_1:9948143-9948162 None:intergenic 50.0%
GTTCGAGATACTCTCGTGAG+CGG - chr8_1:9949082-9949101 Msa1177580:intron 50.0%
GAATGGAGGTGGCTAGGTTT+AGG + chr8_1:9949593-9949612 None:intergenic 50.0%
! CGTTTCAAATGGCGGGAATG+AGG + chr8_1:9950741-9950760 None:intergenic 50.0%
! ATTCCCGCCATTTGAAACGG+CGG - chr8_1:9950742-9950761 Msa1177580:intron 50.0%
ATTCCCGCCGTTTCAAATGG+CGG + chr8_1:9950749-9950768 None:intergenic 50.0%
CTCATTCCCGCCGTTTCAAA+TGG + chr8_1:9951613-9951632 None:intergenic 50.0%
CACATCGTTACTGGTCATGC+AGG - chr8_1:9950790-9950809 Msa1177580:intron 50.0%
TTCGGTCCCGCCATTTCAAA+CGG - chr8_1:9950842-9950861 Msa1177580:intron 50.0%
! ATTCCCGCCGTTTGAAATGG+CGG + chr8_1:9951198-9951217 None:intergenic 50.0%
! ATTCCCGCCGTTTGAAATGG+CGG - chr8_1:9951198-9951217 Msa1177580:intron 50.0%
! ATTCCCGCCGTTTGAAATGG+CGG - chr8_1:9951198-9951217 Msa1177580:intron 50.0%
TTGGGTCCCGCCATTTCAAA+CGG + chr8_1:9951366-9951385 None:intergenic 50.0%
! ATTCCCGCCGTTTGAAATGG+CGG - chr8_1:9951198-9951217 Msa1177580:intron 50.0%
TTCGGTCCCGCCATTTCAAA+CGG + chr8_1:9950842-9950861 None:intergenic 50.0%
CACATCGTTACTGGTCATGC+AGG + chr8_1:9950790-9950809 None:intergenic 50.0%
TTCCCGCCGTTTCAAATAGC+GGG - chr8_1:9951617-9951636 Msa1177580:intron 50.0%
! TTCCCGCTATTTGAAACGGC+GGG + chr8_1:9951622-9951641 None:intergenic 50.0%
GTGTAGAGCGACTACAGTGA+AGG + chr8_1:9951814-9951833 None:intergenic 50.0%
ACACACACTCTTCCTCTTCC+AGG - chr8_1:9951872-9951891 Msa1177580:intron 50.0%
AATCCTCGTCTCGACAAGAG+CGG + chr8_1:9952044-9952063 None:intergenic 50.0%
GCTGTTTGAGAGATTGCCTG+TGG - chr8_1:9952097-9952116 Msa1177580:intron 50.0%
TGGTGGTTGAAATGGAGACG+AGG - chr8_1:9952378-9952397 Msa1177580:intron 50.0%
GTTGAAATGGAGACGAGGCT+CGG - chr8_1:9952383-9952402 Msa1177580:intron 50.0%
TTGAAATGGAGACGAGGCTC+GGG - chr8_1:9952384-9952403 Msa1177580:intron 50.0%
! AAGTACCACTCATGGTGGAG+GGG - chr8_1:9952424-9952443 Msa1177580:intron 50.0%
AATTTCCCCTCCACCATGAG+TGG + chr8_1:9952432-9952451 None:intergenic 50.0%
!! GTATGGAACTGAGTGTTGGG+CGG - chr8_1:9952482-9952501 Msa1177580:intron 50.0%
! AAATCAACGTAGCGGAGACG+AGG - chr8_1:9952526-9952545 Msa1177580:intron 50.0%
AGTCAAATCCCTTGAGGCAG+AGG - chr8_1:9952725-9952744 Msa1177580:intron 50.0%
GTCAAATCCCTTGAGGCAGA+GGG - chr8_1:9952726-9952745 Msa1177580:intron 50.0%
CTAAATGCCCTCTGCCTCAA+GGG + chr8_1:9952736-9952755 None:intergenic 50.0%
! CAAGCCTTTTCCGACTAGGT+GGG + chr8_1:9952841-9952860 None:intergenic 50.0%
! TCAAGCCTTTTCCGACTAGG+TGG + chr8_1:9952842-9952861 None:intergenic 50.0%
CAATGGCTAGGTTTCGATGG+CGG - chr8_1:9953691-9953710 Msa1177580:intron 50.0%
GACAGATCCGATGCAAGGTA+TGG - chr8_1:9953750-9953769 Msa1177580:intron 50.0%
! CGAGAGAGAGTTAGAGCGTT+TGG + chr8_1:9953906-9953925 None:intergenic 50.0%
GTGAACACACGCGCATGTAT+TGG - chr8_1:9953925-9953944 Msa1177580:intron 50.0%
!! GGTGATGGTGGTTTAGATGG+AGG - chr8_1:9954106-9954125 Msa1177580:intron 50.0%
TATGGCAGGTATTCGGGAAG+TGG - chr8_1:9954139-9954158 Msa1177580:intron 50.0%
! CTGTGTAGTGTTGCTATCGC+TGG - chr8_1:9954172-9954191 Msa1177580:intron 50.0%
! GTGTTGCTATCGCTGGATGA+AGG - chr8_1:9954179-9954198 Msa1177580:intron 50.0%
CTGATAATCACCTTTCCCCC+TGG + chr8_1:9954493-9954512 None:intergenic 50.0%
TTGTCTGCTTCGGTGATTCG+CGG + chr8_1:9954534-9954553 None:intergenic 50.0%
AGGACATTTGCTCGCTCCAA+AGG + chr8_1:9954733-9954752 None:intergenic 50.0%
CAGCCTAAAGAAGAGCAGAC+AGG - chr8_1:9955586-9955605 Msa1177580:intron 50.0%
GTTCGACATTGGCAAATGCG+AGG - chr8_1:9955899-9955918 Msa1177580:intron 50.0%
GACACCGGAACAAGACTAGT+TGG + chr8_1:9956283-9956302 None:intergenic 50.0%
GGTGGGAAGGAGGCAGTTAT+TGG - chr8_1:9947947-9947966 Msa1177580:three_prime_UTR 55.0%
! TTCCCGCCATTTGAAACGGC+GGG - chr8_1:9950743-9950762 Msa1177580:intron 55.0%
TTCCCGCCGTTTCAAATGGC+GGG + chr8_1:9950748-9950767 None:intergenic 55.0%
! TTCCCGCCGTTTGAAATGGC+GGG + chr8_1:9951199-9951218 None:intergenic 55.0%
GGACAAAGCAGTGGCAACAC+AGG + chr8_1:9951034-9951053 None:intergenic 55.0%
! TTCCCGCCGTTTGAAATGGC+GGG - chr8_1:9951199-9951218 Msa1177580:intron 55.0%
AGTCCCGCCATTTCAAACGG+CGG + chr8_1:9951205-9951224 None:intergenic 55.0%
! TTCCCGCCGTTTGAAATGGC+GGG - chr8_1:9951199-9951218 Msa1177580:intron 55.0%
! TTCCCGCCGTTTGAAATGGC+GGG - chr8_1:9951199-9951218 Msa1177580:intron 55.0%
AGGTTGTTGCGTTGGACGTG+TGG - chr8_1:9952546-9952565 Msa1177580:intron 55.0%
CCTAAATGCCCTCTGCCTCA+AGG + chr8_1:9952737-9952756 None:intergenic 55.0%
!! CCTTGAGGCAGAGGGCATTT+AGG - chr8_1:9952734-9952753 Msa1177580:intron 55.0%
! CTTTTCCGACTAGGTGGGTC+CGG + chr8_1:9952836-9952855 None:intergenic 55.0%
GCAGGTATTCGGGAAGTGGA+CGG - chr8_1:9954143-9954162 Msa1177580:intron 55.0%
TATTCGGGAAGTGGACGGTG+AGG - chr8_1:9954148-9954167 Msa1177580:intron 55.0%
GCTCGCTCCAAAGGAAGATG+AGG + chr8_1:9954724-9954743 None:intergenic 55.0%
GATGCTTATGGGGCTCCAAG+TGG - chr8_1:9955163-9955182 Msa1177580:intron 55.0%
CTCCAAGTGGAAAGCCTGTG+TGG - chr8_1:9955176-9955195 Msa1177580:intron 55.0%
TGCCACACAGGCTTTCCACT+TGG + chr8_1:9955181-9955200 None:intergenic 55.0%
AGGGGTGAATGGAGGTGGCT+AGG + chr8_1:9949599-9949618 None:intergenic 60.0%
GGTCCCGCCATTTCAAACGG+CGG - chr8_1:9950845-9950864 Msa1177580:intron 60.0%
GTCCCGCCATTTCAAACGGC+GGG - chr8_1:9950846-9950865 Msa1177580:intron 60.0%
CGCATAGCAGGAGTCGAACC+AGG - chr8_1:9950988-9951007 Msa1177580:intron 60.0%
CGCATAGCAGGAGTCGAACC+AGG + chr8_1:9950988-9951007 None:intergenic 60.0%
GTCCCGCCATTTCAAACGGC+GGG + chr8_1:9950846-9950865 None:intergenic 60.0%
CTCCTAGCAGGAGTCGAACC+AGG + chr8_1:9951248-9951267 None:intergenic 60.0%
GTCCCGCCATTTCAAACGGC+GGG + chr8_1:9950846-9950865 None:intergenic 60.0%
GGTCCCGCCATTTCAAACGG+CGG + chr8_1:9950845-9950864 None:intergenic 60.0%
CTCCTAGCAGGAGTCGAACC+AGG + chr8_1:9951248-9951267 None:intergenic 60.0%
GTCCCGCCATTTCAAACGGC+GGG + chr8_1:9950846-9950865 None:intergenic 60.0%
GGTCCCGCCATTTCAAACGG+CGG + chr8_1:9950845-9950864 None:intergenic 60.0%
CGGAGACGAGGTTGTTGCGT+TGG - chr8_1:9952538-9952557 Msa1177580:intron 60.0%
TGTAGCCGGACCCACCTAGT+CGG - chr8_1:9952828-9952847 Msa1177580:intron 60.0%
CGGACCCACCTAGTCGGAAA+AGG - chr8_1:9952834-9952853 Msa1177580:intron 60.0%
CTCCCAGCAGGAGTCGAACC+AGG - chr8_1:9950963-9950982 Msa1177580:intron 65.0%
! CGCCTGGTTCGACTCCTGCT+GGG + chr8_1:9951060-9951079 None:intergenic 65.0%
TCGAACCAGGCGCGCATAGC+AGG - chr8_1:9950976-9950995 Msa1177580:intron 65.0%
GAGTCGAACCAGGCGCGCAT+GGG - chr8_1:9950973-9950992 Msa1177580:intron 65.0%
TGCTTTGTCCCATGCGCGCC+TGG + chr8_1:9951044-9951063 None:intergenic 65.0%
GCGCGCATGGGACAAAGCAG+TGG + chr8_1:9951043-9951062 None:intergenic 65.0%
TGCTTTGTCCCATGCGCGCC+TGG - chr8_1:9951044-9951063 Msa1177580:intron 65.0%
GAGTCGAACCAGGCGCGCAT+GGG + chr8_1:9950973-9950992 None:intergenic 65.0%
TCGAACCAGGCGCGCATAGC+AGG + chr8_1:9950976-9950995 None:intergenic 65.0%
! CGCCTGGTTCGACTCCTGCT+GGG - chr8_1:9951060-9951079 Msa1177580:intron 65.0%
CTCCCAGCAGGAGTCGAACC+AGG + chr8_1:9950963-9950982 None:intergenic 65.0%
! CGCCTGGTTCGACTCCTGCT+AGG - chr8_1:9951060-9951079 Msa1177580:intron 65.0%
! CGCCTGGTTCGACTCCTGCT+AGG - chr8_1:9951060-9951079 Msa1177580:intron 65.0%
GCTTCGGTGATTCGCGGTGC+TGG + chr8_1:9954528-9954547 None:intergenic 65.0%
! GCGCCTGGTTCGACTCCTGC+TGG + chr8_1:9951059-9951078 None:intergenic 70.0%
CGACTCCTGCTATGCGCGCC+TGG + chr8_1:9951069-9951088 None:intergenic 70.0%
GGAGTCGAACCAGGCGCGCA+TGG - chr8_1:9950972-9950991 Msa1177580:intron 70.0%
GGAGTCGAACCAGGCGCGCA+TGG + chr8_1:9950972-9950991 None:intergenic 70.0%
CGACTCCTGCTATGCGCGCC+TGG - chr8_1:9951069-9951088 Msa1177580:intron 70.0%
! GCGCCTGGTTCGACTCCTGC+TGG - chr8_1:9951059-9951078 Msa1177580:intron 70.0%
CGGCCGCTCTTGTCGAGACG+AGG - chr8_1:9952038-9952057 Msa1177580:CDS 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 9947799 9956320 9947799 ID=Msa1177580;Name=Msa1177580
chr8_1 mRNA 9947799 9956320 9947799 ID=Msa1177580-mRNA-1;Parent=Msa1177580;Name=Msa1177580-mRNA-1;_AED=0.22;_eAED=0.22;_QI=0|0.66|0.71|0.85|0.66|0.71|7|316|239
chr8_1 exon 9947799 9948258 9947799 ID=Msa1177580-mRNA-1:exon:3435;Parent=Msa1177580-mRNA-1
chr8_1 exon 9948495 9948620 9948495 ID=Msa1177580-mRNA-1:exon:3434;Parent=Msa1177580-mRNA-1
chr8_1 exon 9948906 9949005 9948906 ID=Msa1177580-mRNA-1:exon:3433;Parent=Msa1177580-mRNA-1
chr8_1 exon 9949551 9949625 9949551 ID=Msa1177580-mRNA-1:exon:3432;Parent=Msa1177580-mRNA-1
chr8_1 exon 9950353 9950418 9950353 ID=Msa1177580-mRNA-1:exon:3431;Parent=Msa1177580-mRNA-1
chr8_1 exon 9951954 9952103 9951954 ID=Msa1177580-mRNA-1:exon:3430;Parent=Msa1177580-mRNA-1
chr8_1 exon 9956262 9956320 9956262 ID=Msa1177580-mRNA-1:exon:3429;Parent=Msa1177580-mRNA-1
chr8_1 CDS 9956262 9956320 9956262 ID=Msa1177580-mRNA-1:cds;Parent=Msa1177580-mRNA-1
chr8_1 CDS 9951954 9952103 9951954 ID=Msa1177580-mRNA-1:cds;Parent=Msa1177580-mRNA-1
chr8_1 CDS 9950353 9950418 9950353 ID=Msa1177580-mRNA-1:cds;Parent=Msa1177580-mRNA-1
chr8_1 CDS 9949551 9949625 9949551 ID=Msa1177580-mRNA-1:cds;Parent=Msa1177580-mRNA-1
chr8_1 CDS 9948906 9949005 9948906 ID=Msa1177580-mRNA-1:cds;Parent=Msa1177580-mRNA-1
chr8_1 CDS 9948495 9948620 9948495 ID=Msa1177580-mRNA-1:cds;Parent=Msa1177580-mRNA-1
chr8_1 CDS 9948115 9948258 9948115 ID=Msa1177580-mRNA-1:cds;Parent=Msa1177580-mRNA-1
chr8_1 three_prime_UTR 9947799 9948114 9947799 ID=Msa1177580-mRNA-1:three_prime_utr;Parent=Msa1177580-mRNA-1
Gene Sequence

>Msa1177580

ATGTATAATCGAATTGAGAAGCTCGCCATGTTCTATCATTCAACCACCATGAAAATTAGGATGAAGATGACGTCATTGGTTCGGCCGCTCTTGTCGAGACGAGGATTCAGTACGAGTTCTGACAAAATGGTTGCCTCTGTGCTGTTTGAGAGATTGCCTGTGGTTATTCCCAAAATTGACCCTATTGTTTATGCTTTTCAAGAATTCTCGTTTCGATGGCGGCAACAATATCAACGCAGATATCCCGATGAATTTCTAGACAGATCCGATGCAAGGGGGAAAGGTGATTATCAGATTGACTATGTGCCAGCACCGCGAATCACCGAAGCAGACAAACAAAATGATCGAAGGTCACTACAAAGGGCTCTTGACAGAAGACTTTACCTTCTTCTCTATGGTGATGCTTATGGGGCTCCAAGTGGAAAGCCTGTGTGGCATTTTCCAGAAAAATGTGCAGAATCTGCCTTGAAATCAGTCGTAGGAGATCTTTCGAATACATATTTTGTCGGAAATGCTCCGATGGCTCATATGGTTGTTCAGCCTAAAGAAGAGCAGACAGGATCAACATCTTTTAAGAAATTCTTCTTCAAATCACAAGTAATTGCTAAAAACAAGTTCGACATTGGCAAATGCGAGGACTTTGTTTGGGTGACTAAGGATGAATTGATGGAGTATTTTCCTGAGCAAGCTGAGTTTTTAAACAAAATGATCATTAGCTGA
Protein sequence

>Msa1177580

MYNRIEKLAMFYHSTTMKIRMKMTSLVRPLLSRRGFSTSSDKMVASVLFERLPVVIPKIDPIVYAFQEFSFRWRQQYQRRYPDEFLDRSDARGKGDYQIDYVPAPRITEADKQNDRRSLQRALDRRLYLLLYGDAYGAPSGKPVWHFPEKCAESALKSVVGDLSNTYFVGNAPMAHMVVQPKEEQTGSTSFKKFFFKSQVIAKNKFDIGKCEDFVWVTKDELMEYFPEQAEFLNKMIIS*