Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1177980 | XP_024629532.1 | 98.045 | 358 | 6 | 1 | 1 | 357 | 1 | 358 | 0.0 | 712 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1177980 | sp|Q8LF97|ASK21_ARATH | 64.578 | 367 | 97 | 10 | 1 | 357 | 1 | 344 | 7.70e-141 | 407 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0756630 | Msa1177980 | -0.815321 | 9.814236e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1177980 | MtrunA17_Chr8g0348821 | 94.751 | 362 | 10 | 2 | 1 | 361 | 1 | 354 | 0.0 | 690 |
| Msa1177980 | MtrunA17_Chr7g0247861 | 72.853 | 361 | 79 | 6 | 1 | 359 | 1 | 344 | 3.87e-165 | 466 |
| Msa1177980 | MtrunA17_Chr6g0470511 | 57.778 | 360 | 141 | 4 | 1 | 359 | 1 | 350 | 1.28e-128 | 373 |
| Msa1177980 | MtrunA17_Chr2g0330971 | 67.470 | 332 | 76 | 9 | 12 | 340 | 5 | 307 | 2.41e-128 | 370 |
| Msa1177980 | MtrunA17_Chr2g0330981 | 62.139 | 346 | 93 | 9 | 1 | 341 | 1 | 313 | 2.88e-120 | 350 |
| Msa1177980 | MtrunA17_Chr8g0335691 | 60.182 | 329 | 78 | 7 | 10 | 334 | 3 | 282 | 7.62e-106 | 313 |
| Msa1177980 | MtrunA17_Chr8g0335711 | 52.976 | 336 | 122 | 10 | 8 | 334 | 1 | 309 | 5.87e-86 | 263 |
| Msa1177980 | MtrunA17_Chr8g0335731 | 70.053 | 187 | 47 | 2 | 10 | 195 | 3 | 181 | 2.48e-85 | 257 |
| Msa1177980 | MtrunA17_Chr8g0335761 | 47.353 | 340 | 114 | 9 | 1 | 334 | 1 | 281 | 8.96e-80 | 246 |
| Msa1177980 | MtrunA17_Chr7g0228441 | 59.292 | 226 | 69 | 6 | 10 | 230 | 3 | 210 | 1.29e-75 | 233 |
| Msa1177980 | MtrunA17_Chr3g0103481 | 66.935 | 124 | 33 | 1 | 68 | 191 | 1 | 116 | 1.81e-48 | 159 |
| Msa1177980 | MtrunA17_Chr4g0014211 | 31.915 | 141 | 77 | 5 | 20 | 150 | 16 | 147 | 4.96e-14 | 69.3 |
| Msa1177980 | MtrunA17_Chr3g0139751 | 32.292 | 96 | 58 | 1 | 62 | 150 | 47 | 142 | 1.07e-13 | 68.2 |
| Msa1177980 | MtrunA17_Chr4g0014271 | 40.000 | 100 | 55 | 3 | 64 | 159 | 51 | 149 | 1.34e-13 | 67.8 |
| Msa1177980 | MtrunA17_Chr7g0221641 | 34.783 | 92 | 55 | 1 | 64 | 150 | 49 | 140 | 2.40e-13 | 67.4 |
| Msa1177980 | MtrunA17_Chr7g0259231 | 32.292 | 96 | 58 | 1 | 62 | 150 | 48 | 143 | 2.88e-13 | 67.0 |
| Msa1177980 | MtrunA17_Chr4g0014241 | 31.884 | 138 | 83 | 4 | 16 | 150 | 5 | 134 | 3.03e-13 | 66.6 |
| Msa1177980 | MtrunA17_Chr4g0015171 | 31.618 | 136 | 83 | 3 | 20 | 150 | 14 | 144 | 3.72e-13 | 66.6 |
| Msa1177980 | MtrunA17_Chr5g0405891 | 29.412 | 136 | 86 | 3 | 20 | 150 | 9 | 139 | 7.08e-13 | 65.9 |
| Msa1177980 | MtrunA17_Chr5g0405871 | 30.147 | 136 | 85 | 3 | 20 | 150 | 9 | 139 | 7.58e-13 | 65.9 |
| Msa1177980 | MtrunA17_Chr7g0259271 | 34.783 | 92 | 55 | 1 | 64 | 150 | 49 | 140 | 1.15e-12 | 65.5 |
| Msa1177980 | MtrunA17_Chr4g0014231 | 28.777 | 139 | 88 | 4 | 18 | 150 | 26 | 159 | 2.35e-12 | 65.1 |
| Msa1177980 | MtrunA17_Chr7g0259261 | 36.559 | 93 | 52 | 2 | 64 | 150 | 49 | 140 | 2.37e-12 | 64.3 |
| Msa1177980 | MtrunA17_Chr4g0015151 | 30.657 | 137 | 83 | 3 | 20 | 150 | 14 | 144 | 3.01e-12 | 64.3 |
| Msa1177980 | MtrunA17_Chr8g0362291 | 35.106 | 94 | 54 | 2 | 63 | 150 | 48 | 140 | 7.26e-12 | 63.2 |
| Msa1177980 | MtrunA17_Chr7g0221621 | 33.333 | 96 | 59 | 1 | 60 | 150 | 45 | 140 | 7.98e-12 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1177980 | AT3G61415.2 | 64.578 | 367 | 97 | 10 | 1 | 357 | 1 | 344 | 7.63e-142 | 406 |
| Msa1177980 | AT3G61415.1 | 64.578 | 367 | 97 | 10 | 1 | 357 | 1 | 344 | 7.83e-142 | 407 |
| Msa1177980 | AT2G45950.5 | 62.155 | 362 | 114 | 6 | 1 | 360 | 1 | 341 | 1.12e-135 | 391 |
| Msa1177980 | AT2G45950.2 | 62.155 | 362 | 114 | 6 | 1 | 360 | 1 | 341 | 1.12e-135 | 391 |
| Msa1177980 | AT2G45950.3 | 62.396 | 359 | 112 | 6 | 1 | 357 | 1 | 338 | 1.30e-135 | 390 |
| Msa1177980 | AT2G45950.1 | 62.396 | 359 | 112 | 6 | 1 | 357 | 1 | 338 | 1.30e-135 | 390 |
| Msa1177980 | AT2G45950.4 | 62.396 | 359 | 112 | 6 | 1 | 357 | 1 | 338 | 1.30e-135 | 390 |
| Msa1177980 | AT3G21850.1 | 32.624 | 141 | 88 | 4 | 13 | 150 | 1 | 137 | 1.34e-15 | 73.9 |
| Msa1177980 | AT1G75950.1 | 32.394 | 142 | 80 | 3 | 20 | 150 | 8 | 144 | 1.70e-13 | 68.2 |
| Msa1177980 | AT2G03170.1 | 36.364 | 99 | 59 | 4 | 55 | 150 | 36 | 133 | 6.99e-13 | 66.2 |
| Msa1177980 | AT5G42190.1 | 30.435 | 115 | 58 | 2 | 57 | 150 | 42 | 155 | 3.00e-12 | 65.1 |
| Msa1177980 | AT4G34210.1 | 35.556 | 90 | 55 | 1 | 64 | 150 | 47 | 136 | 6.00e-12 | 63.5 |
| Msa1177980 | AT1G20140.1 | 29.139 | 151 | 84 | 5 | 15 | 150 | 5 | 147 | 3.75e-11 | 61.6 |
| Msa1177980 | AT4G34470.1 | 34.444 | 90 | 56 | 1 | 64 | 150 | 47 | 136 | 4.65e-11 | 60.8 |
| Msa1177980 | AT3G21830.1 | 26.471 | 136 | 92 | 2 | 18 | 150 | 6 | 136 | 9.89e-11 | 60.1 |
Find 89 sgRNAs with CRISPR-Local
Find 396 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTAAGCTCTTTCCTCTTCT+TGG | 0.128563 | 8_1:-10590024 | None:intergenic |
| TGATGATATGGTTCCAATTT+TGG | 0.132333 | 8_1:+10592972 | Msa1177980:three_prime_UTR |
| GAAAATAGCAAAACCAAAAT+TGG | 0.237494 | 8_1:-10592985 | None:intergenic |
| CAATCTCTTGTTCCACTTGT+TGG | 0.249133 | 8_1:-10589393 | None:intergenic |
| TTCAAAAGGAAAAGGCAAAA+TGG | 0.263363 | 8_1:-10592900 | None:intergenic |
| ACCAATGGGAATGGCTTTCT+AGG | 0.268722 | 8_1:+10592740 | Msa1177980:CDS |
| ACAGAAGAATTCTTCTTTGA+AGG | 0.317375 | 8_1:+10591817 | Msa1177980:CDS |
| TTCCTTCTCTAGGAGGTAAA+TGG | 0.321616 | 8_1:+10591983 | Msa1177980:intron |
| CTTGTGAAATATGTGAAAAT+TGG | 0.324707 | 8_1:-10588367 | None:intergenic |
| TCAAAAGGAAAAGGCAAAAT+GGG | 0.351936 | 8_1:-10592899 | None:intergenic |
| CCCGCAGATTAAATTCTAAC+TGG | 0.355254 | 8_1:+10592657 | Msa1177980:CDS |
| AAGACATACTGCACAATTCT+TGG | 0.359550 | 8_1:-10589470 | None:intergenic |
| TTCAAAGGGCTTCTGCAATC+AGG | 0.363239 | 8_1:-10588303 | None:intergenic |
| TGTCAAGAAATATTACAAAA+AGG | 0.366988 | 8_1:+10589436 | Msa1177980:CDS |
| AGAATTAAGCTCAACATTGC+AGG | 0.377228 | 8_1:-10589508 | None:intergenic |
| GTGACTATGCACAGCTTGAT+TGG | 0.406800 | 8_1:-10593037 | None:intergenic |
| TCCTCTTCTTGGCATACAAT+CGG | 0.409159 | 8_1:-10590013 | None:intergenic |
| AATATTTCTTGACATATAAA+CGG | 0.428521 | 8_1:-10589427 | None:intergenic |
| TAAAGAGCGTGAGAGGATAA+AGG | 0.430215 | 8_1:+10590043 | Msa1177980:CDS |
| CCATAGGATCATCGTATGTA+TGG | 0.431920 | 8_1:-10592066 | None:intergenic |
| TACCTTGGAGTGAAGAGAAA+TGG | 0.433697 | 8_1:-10586380 | None:intergenic |
| CGGTTATGTCCTCCCTTCAA+AGG | 0.437397 | 8_1:-10588318 | None:intergenic |
| GAAGTTTGAAGCCACACATA+AGG | 0.447376 | 8_1:-10589358 | None:intergenic |
| CAGCCTTCAGTTAAAGCCAT+TGG | 0.449173 | 8_1:+10589750 | Msa1177980:CDS |
| TGTCGATTTCATCAAGTACT+AGG | 0.451108 | 8_1:+10589538 | Msa1177980:CDS |
| TTCCATTAATAAAAGACAAA+AGG | 0.453283 | 8_1:-10590875 | None:intergenic |
| CGGTTCAAAAGCCTTATCCT+TGG | 0.469362 | 8_1:-10589993 | None:intergenic |
| CACTTGTTGGATTGATTCAT+CGG | 0.471523 | 8_1:-10589380 | None:intergenic |
| CTCAAATGCACGATGTCCCT+TGG | 0.472479 | 8_1:-10588257 | None:intergenic |
| TTTACAACAACCTTCTTATG+TGG | 0.473578 | 8_1:-10591851 | None:intergenic |
| GCTCTTGCTCGAATAATTGA+AGG | 0.475267 | 8_1:+10589790 | Msa1177980:CDS |
| GACACCTCTGTAAGATCATC+AGG | 0.476044 | 8_1:-10589850 | None:intergenic |
| TGATTGCAGAAGCCCTTTGA+AGG | 0.477173 | 8_1:+10588305 | Msa1177980:five_prime_UTR |
| ATCATCAGTTATGTTTCTCA+AGG | 0.487275 | 8_1:-10589970 | None:intergenic |
| AGATGATGATATAGATGATC+CGG | 0.489147 | 8_1:+10592117 | Msa1177980:CDS |
| GGTTATGTCCTCCCTTCAAA+GGG | 0.494077 | 8_1:-10588317 | None:intergenic |
| TATAATCCAGGAAGAGAAGC+TGG | 0.494548 | 8_1:+10589944 | Msa1177980:intron |
| TTATTGAAGTTCAACTAGAA+AGG | 0.494730 | 8_1:-10592800 | None:intergenic |
| AAGAGAGAGAAAGTGAGAGT+TGG | 0.501111 | 8_1:-10586337 | None:intergenic |
| TCAAAGAAGAATTCTTCTGT+TGG | 0.501353 | 8_1:-10591814 | None:intergenic |
| TATTCGAGCAAGAGCACGAC+TGG | 0.501432 | 8_1:-10589782 | None:intergenic |
| CAATGATATTCAAAAGGAAA+AGG | 0.503903 | 8_1:-10592908 | None:intergenic |
| GATGATCTTACAGAGGTGTC+TGG | 0.506464 | 8_1:+10589853 | Msa1177980:CDS |
| AAACAACAATGATATTCAAA+AGG | 0.507580 | 8_1:-10592914 | None:intergenic |
| CCAGTTAGAATTTAATCTGC+GGG | 0.510673 | 8_1:-10592657 | None:intergenic |
| CCATACATACGATGATCCTA+TGG | 0.512359 | 8_1:+10592066 | Msa1177980:CDS |
| TAACTGATGATCCAAGGATA+AGG | 0.514531 | 8_1:+10589982 | Msa1177980:CDS |
| ATCATCTGTACCACATAAGA+AGG | 0.516095 | 8_1:+10591841 | Msa1177980:CDS |
| TACTTTGTGATGCAGGGAAG+TGG | 0.523951 | 8_1:+10592625 | Msa1177980:intron |
| TTTATTAATGGAAATGATGG+AGG | 0.529025 | 8_1:+10590885 | Msa1177980:CDS |
| TTTCATGTTTCAGAATGTTG+AGG | 0.538493 | 8_1:+10590815 | Msa1177980:intron |
| ATCCATTTCTCTTCACTCCA+AGG | 0.542351 | 8_1:+10586378 | Msa1177980:five_prime_UTR |
| CCCTAGAAAGCCATTCCCAT+TGG | 0.543209 | 8_1:-10592741 | None:intergenic |
| AAGAGCTTAAAGAGCGTGAG+AGG | 0.550859 | 8_1:+10590036 | Msa1177980:CDS |
| CTTATGATGAGAAATTCGTT+AGG | 0.551402 | 8_1:+10589686 | Msa1177980:CDS |
| AATATATCACGTATCTCCTC+CGG | 0.556082 | 8_1:-10589820 | None:intergenic |
| CGATGAATCAATCCAACAAG+TGG | 0.562835 | 8_1:+10589381 | Msa1177980:CDS |
| CAACCAATGGCTTTAACTGA+AGG | 0.566317 | 8_1:-10589753 | None:intergenic |
| GTATGTATGGTGTAAACTTG+AGG | 0.568132 | 8_1:-10592053 | None:intergenic |
| AACCATATCATCAAAACTAG+TGG | 0.570502 | 8_1:-10592962 | None:intergenic |
| GATTGCAGAAGCCCTTTGAA+GGG | 0.570568 | 8_1:+10588306 | Msa1177980:five_prime_UTR |
| ATTGCAGGACTGACTTGTTG+AGG | 0.581903 | 8_1:-10589493 | None:intergenic |
| CCAATGGGAATGGCTTTCTA+GGG | 0.582089 | 8_1:+10592741 | Msa1177980:CDS |
| TGCAGAAGCCCTTTGAAGGG+AGG | 0.584565 | 8_1:+10588309 | Msa1177980:five_prime_UTR |
| ACCGATTGTATGCCAAGAAG+AGG | 0.585725 | 8_1:+10590012 | Msa1177980:CDS |
| GAAAAGGCAAAATGGGGCAT+CGG | 0.587043 | 8_1:-10592892 | None:intergenic |
| AGTACTAGGCCGCTCAAACA+AGG | 0.587931 | 8_1:+10589552 | Msa1177980:CDS |
| CTTTACAAACAATACAACCT+CGG | 0.588508 | 8_1:-10588338 | None:intergenic |
| ATTGAAGAACCTTGTTTGAG+CGG | 0.591670 | 8_1:-10589561 | None:intergenic |
| TCATCATCGAACTCAACCAT+AGG | 0.600224 | 8_1:-10592082 | None:intergenic |
| AATAATTGAAGGAAGATCAC+CGG | 0.603267 | 8_1:+10589801 | Msa1177980:CDS |
| TCATCAGTTATGTTTCTCAA+GGG | 0.605396 | 8_1:-10589969 | None:intergenic |
| GAAACATAACTGATGATCCA+AGG | 0.605496 | 8_1:+10589976 | Msa1177980:CDS |
| GTGGCACTGCAAATTCTCCA+AGG | 0.614762 | 8_1:+10588240 | Msa1177980:five_prime_UTR |
| GCCATGTCAGTTTCTGACAT+CGG | 0.624999 | 8_1:-10588402 | None:intergenic |
| GCCAGTTAGAATTTAATCTG+CGG | 0.626882 | 8_1:-10592658 | None:intergenic |
| CTAGTGGACCAAAATGCAGA+AGG | 0.629961 | 8_1:-10592946 | None:intergenic |
| CATCGTCTTCCTTTCCTGTG+AGG | 0.630575 | 8_1:-10592708 | None:intergenic |
| TGGCACTGCAAATTCTCCAA+GGG | 0.636754 | 8_1:+10588241 | Msa1177980:five_prime_UTR |
| CAAAAGGAAAAGGCAAAATG+GGG | 0.644119 | 8_1:-10592898 | None:intergenic |
| TTTGCCTGATGATCTTACAG+AGG | 0.655792 | 8_1:+10589846 | Msa1177980:CDS |
| TGTAAACTTGAGGTCTCACA+CGG | 0.674315 | 8_1:-10592043 | None:intergenic |
| TACTGTGATGCAGATTTGTG+TGG | 0.677985 | 8_1:+10588221 | Msa1177980:intron |
| CATGGCAGTTATTAAACCCG+AGG | 0.683521 | 8_1:+10588419 | Msa1177980:CDS |
| TCCGATGTCAGAAACTGACA+TGG | 0.687992 | 8_1:+10588401 | Msa1177980:exon |
| AATTGAAGGAAGATCACCGG+AGG | 0.693149 | 8_1:+10589804 | Msa1177980:CDS |
| AGATGATGAAGCCTTATGTG+TGG | 0.697842 | 8_1:+10589347 | Msa1177980:intron |
| CGACTGGTGAGATCAACCAA+TGG | 0.697991 | 8_1:-10589766 | None:intergenic |
| TTGAAGGGAGGACATAACCG+AGG | 0.713366 | 8_1:+10588321 | Msa1177980:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTAAATGTTTAATTTTG+TGG | + | chr8_1:10586661-10586680 | Msa1177980:intron | 10.0% |
| !!! | ATTAAAAATAGTTGATTTTT+AGG | + | chr8_1:10586696-10586715 | Msa1177980:intron | 10.0% |
| !! | ATTTGATTGATAAAAAATTA+TGG | + | chr8_1:10587076-10587095 | Msa1177980:intron | 10.0% |
| !!! | GATTTTAAAAAATTCAATTT+TGG | - | chr8_1:10587815-10587834 | None:intergenic | 10.0% |
| !! | TTAAACAAAATTTAACAATT+GGG | - | chr8_1:10588506-10588525 | None:intergenic | 10.0% |
| !!! | TAAGTTTAAAAGTATAAAAA+TGG | - | chr8_1:10589251-10589270 | None:intergenic | 10.0% |
| !!! | CAAAACTTTTTTATAATTTA+GGG | - | chr8_1:10590784-10590803 | None:intergenic | 10.0% |
| !!! | TCAAAACTTTTTTATAATTT+AGG | - | chr8_1:10590785-10590804 | None:intergenic | 10.0% |
| !! | TAAGAAAATTATTTATAAAC+CGG | + | chr8_1:10591489-10591508 | Msa1177980:intron | 10.0% |
| !!! | TAAGAAATTTATATGATTTT+TGG | + | chr8_1:10591610-10591629 | Msa1177980:intron | 10.0% |
| !!! | AAGAAATTTATATGATTTTT+GGG | + | chr8_1:10591611-10591630 | Msa1177980:intron | 10.0% |
| !!! | TAATTTTGAAAAATTTGATG+AGG | + | chr8_1:10586946-10586965 | Msa1177980:intron | 15.0% |
| !! | ATTGATCATAAAAGTAATTT+AGG | + | chr8_1:10587533-10587552 | Msa1177980:intron | 15.0% |
| !! | CTTAAACAAAATTTAACAAT+TGG | - | chr8_1:10588507-10588526 | None:intergenic | 15.0% |
| !!! | CAATTGTTAAATTTTGTTTA+AGG | + | chr8_1:10588505-10588524 | Msa1177980:intron | 15.0% |
| !! | AATATTTCTTGACATATAAA+CGG | - | chr8_1:10589430-10589449 | None:intergenic | 15.0% |
| !! | AAAATCCAAGAAAATATAAT+CGG | - | chr8_1:10589900-10589919 | None:intergenic | 15.0% |
| !!! | GAAATTGAATTTTAGAAATT+AGG | + | chr8_1:10590465-10590484 | Msa1177980:intron | 15.0% |
| !! | TATAAAAATTATTCCAGTTA+GGG | - | chr8_1:10591332-10591351 | None:intergenic | 15.0% |
| !! | ATATAAAAATTATTCCAGTT+AGG | - | chr8_1:10591333-10591352 | None:intergenic | 15.0% |
| !!! | ACTGGAATAATTTTTATATA+AGG | + | chr8_1:10591334-10591353 | Msa1177980:intron | 15.0% |
| !! | ATAAATAGTTAACTTTAATC+CGG | - | chr8_1:10591511-10591530 | None:intergenic | 15.0% |
| !!! | AAAATATTTGAGATTCTTTT+AGG | + | chr8_1:10591663-10591682 | Msa1177980:intron | 15.0% |
| !!! | AAATATTTGAGATTCTTTTA+GGG | + | chr8_1:10591664-10591683 | Msa1177980:intron | 15.0% |
| !!! | CTTTATCCTTTTTTTTTTTT+TGG | + | chr8_1:10592399-10592418 | Msa1177980:intron | 15.0% |
| !! | AAACATCCAAAAAAAAAAAA+AGG | - | chr8_1:10592408-10592427 | None:intergenic | 15.0% |
| !!! | TTTTTTTTTTTGGATGTTTA+AGG | + | chr8_1:10592409-10592428 | Msa1177980:intron | 15.0% |
| !! | TGATATTAAGAAAAGTTTAT+AGG | + | chr8_1:10592548-10592567 | Msa1177980:intron | 15.0% |
| !! | GATATTAAGAAAAGTTTATA+GGG | + | chr8_1:10592549-10592568 | Msa1177980:intron | 15.0% |
| !! | TGAAATGCAAAAAAATGAAT+CGG | - | chr8_1:10586432-10586451 | None:intergenic | 20.0% |
| !!! | TTGTATGTTGTTTTTTTGTA+AGG | + | chr8_1:10586549-10586568 | Msa1177980:intron | 20.0% |
| !!! | TGTTTTTTTGTAAGGATAAT+TGG | + | chr8_1:10586557-10586576 | Msa1177980:intron | 20.0% |
| !!! | ATTATTTTTTTCAGTTCAGA+AGG | + | chr8_1:10586626-10586645 | Msa1177980:intron | 20.0% |
| !! | TTGTGATTAAAATACAAGTT+GGG | + | chr8_1:10586748-10586767 | Msa1177980:intron | 20.0% |
| !! | TTGAATATTGATGTTTATGT+TGG | + | chr8_1:10586773-10586792 | Msa1177980:intron | 20.0% |
| !!! | TTGATAATGCTAATCATTAT+TGG | + | chr8_1:10586813-10586832 | Msa1177980:intron | 20.0% |
| !!! | CTATAATTTTCCCTAAATTT+GGG | - | chr8_1:10587152-10587171 | None:intergenic | 20.0% |
| !!! | TTTATCACATTCTCAATTTT+AGG | - | chr8_1:10587206-10587225 | None:intergenic | 20.0% |
| !!! | TAAGAACACCAATTTTAATT+GGG | - | chr8_1:10587282-10587301 | None:intergenic | 20.0% |
| !! | AATCAAACATACACTAAAAA+TGG | - | chr8_1:10587586-10587605 | None:intergenic | 20.0% |
| !!! | GTTATATTGATTTCTACAAA+AGG | - | chr8_1:10587942-10587961 | None:intergenic | 20.0% |
| !! | TGTTTATAAGTAAAAGACAA+AGG | - | chr8_1:10588561-10588580 | None:intergenic | 20.0% |
| !! | GATGTACAAATAATTTCAAT+AGG | + | chr8_1:10588633-10588652 | Msa1177980:intron | 20.0% |
| !!! | AAAATCTGTGATTTTTGAAA+CGG | - | chr8_1:10588746-10588765 | None:intergenic | 20.0% |
| !!! | AAAATCACAGATTTTTAAAC+TGG | + | chr8_1:10588751-10588770 | Msa1177980:intron | 20.0% |
| !! | TAATAAAACTGACACTATAT+TGG | + | chr8_1:10589307-10589326 | Msa1177980:intron | 20.0% |
| !! | TGTCAAGAAATATTACAAAA+AGG | + | chr8_1:10589436-10589455 | Msa1177980:CDS | 20.0% |
| !!! | ACTTTCTTTTTATTGTTGTA+TGG | - | chr8_1:10590333-10590352 | None:intergenic | 20.0% |
| !! | AGAAAGTAAAATCTAAAAGA+GGG | + | chr8_1:10590488-10590507 | Msa1177980:intron | 20.0% |
| !! | TTCCATTAATAAAAGACAAA+AGG | - | chr8_1:10590878-10590897 | None:intergenic | 20.0% |
| !!! | TCTTTTATTAATGGAAATGA+TGG | + | chr8_1:10590882-10590901 | Msa1177980:CDS | 20.0% |
| !!! | TAATGTTCGTCTTTTAAAAT+GGG | - | chr8_1:10591045-10591064 | None:intergenic | 20.0% |
| !! | AATGTTTGTCTTATAGAAAA+GGG | - | chr8_1:10591239-10591258 | None:intergenic | 20.0% |
| !! | AAATGTTTGTCTTATAGAAA+AGG | - | chr8_1:10591240-10591259 | None:intergenic | 20.0% |
| !!! | TCAATTTTTGCTTTTAATAC+CGG | - | chr8_1:10592139-10592158 | None:intergenic | 20.0% |
| !! | TATTAAAAGCAAAAATTGAC+AGG | + | chr8_1:10592140-10592159 | Msa1177980:CDS | 20.0% |
| !!! | CATGTTGAATAGATATTTTA+AGG | + | chr8_1:10592335-10592354 | Msa1177980:intron | 20.0% |
| !!! | TTGTTAAAACTTTTTTGTCT+TGG | + | chr8_1:10592829-10592848 | Msa1177980:intron | 20.0% |
| !!! | TATTATGCAACAAAGTTTTT+CGG | - | chr8_1:10592858-10592877 | None:intergenic | 20.0% |
| !! | AAACAACAATGATATTCAAA+AGG | - | chr8_1:10592917-10592936 | None:intergenic | 20.0% |
| ! | TGATTATTCAACACGAATTA+AGG | - | chr8_1:10586495-10586514 | None:intergenic | 25.0% |
| ! | AATTCGTGTTGAATAATCAA+TGG | + | chr8_1:10586496-10586515 | Msa1177980:intron | 25.0% |
| ! | TGATGTTACTAATTTGGTAT+TGG | + | chr8_1:10586723-10586742 | Msa1177980:intron | 25.0% |
| ! | CTTGTGATTAAAATACAAGT+TGG | + | chr8_1:10586747-10586766 | Msa1177980:intron | 25.0% |
| ! | TGTGATTAAAATACAAGTTG+GGG | + | chr8_1:10586749-10586768 | Msa1177980:intron | 25.0% |
| ! | CTGAATTATTGAAAGTAACA+GGG | + | chr8_1:10586920-10586939 | Msa1177980:intron | 25.0% |
| !! | AAAATTTGATGAGGCTTTTA+TGG | + | chr8_1:10586955-10586974 | Msa1177980:intron | 25.0% |
| ! | GTATATCTGTCTTCATAAAT+CGG | - | chr8_1:10587041-10587060 | None:intergenic | 25.0% |
| !! | CCTATAATTTTCCCTAAATT+TGG | - | chr8_1:10587153-10587172 | None:intergenic | 25.0% |
| ! | CCAAATTTAGGGAAAATTAT+AGG | + | chr8_1:10587150-10587169 | Msa1177980:intron | 25.0% |
| ! | GATTAGAACCCAATTAAAAT+TGG | + | chr8_1:10587271-10587290 | Msa1177980:intron | 25.0% |
| !!! | CTAAGAACACCAATTTTAAT+TGG | - | chr8_1:10587283-10587302 | None:intergenic | 25.0% |
| ! | TCTTAGTACATAAAAGAGAA+AGG | + | chr8_1:10587297-10587316 | Msa1177980:intron | 25.0% |
| !! | ATTTTGAATCATAACAGCTT+TGG | + | chr8_1:10587502-10587521 | Msa1177980:intron | 25.0% |
| !!! | AGATTTTTCATGGTTGTTTT+TGG | - | chr8_1:10587972-10587991 | None:intergenic | 25.0% |
| ! | ATACTGCTGTTCTTAAATTA+TGG | - | chr8_1:10588081-10588100 | None:intergenic | 25.0% |
| ! | CTTGTGAAATATGTGAAAAT+TGG | - | chr8_1:10588370-10588389 | None:intergenic | 25.0% |
| !!! | TTTGTTTAAGGTGTACTTTT+TGG | + | chr8_1:10588517-10588536 | Msa1177980:intron | 25.0% |
| ! | TTGTTTCACGTAATATTTGA+TGG | + | chr8_1:10588602-10588621 | Msa1177980:intron | 25.0% |
| !! | ATTGGGATTCAATTTTGTAT+GGG | - | chr8_1:10588721-10588740 | None:intergenic | 25.0% |
| !!! | AAATCTGTGATTTTTGAAAC+GGG | - | chr8_1:10588745-10588764 | None:intergenic | 25.0% |
| ! | CTTTCACCTTAATCTATTTA+AGG | + | chr8_1:10588924-10588943 | Msa1177980:intron | 25.0% |
| ! | ACATCTAATGTTTACATAGT+TGG | - | chr8_1:10589070-10589089 | None:intergenic | 25.0% |
| !!! | ACTTCTCTTTGTTTTTCTTT+TGG | + | chr8_1:10589284-10589303 | Msa1177980:intron | 25.0% |
| ! | GAAATATTACAAAAAGGCAA+TGG | + | chr8_1:10589442-10589461 | Msa1177980:CDS | 25.0% |
| !! | TTATCTTGTGGATTATATTC+TGG | + | chr8_1:10589588-10589607 | Msa1177980:intron | 25.0% |
| !! | GATTTTCTTTTGTATAGGAA+CGG | + | chr8_1:10589659-10589678 | Msa1177980:intron | 25.0% |
| ! | TTATAAGAATGTGTGAGAAA+TGG | - | chr8_1:10589929-10589948 | None:intergenic | 25.0% |
| !!! | GTATGGTTTTTTTTGTTGTT+CGG | - | chr8_1:10590316-10590335 | None:intergenic | 25.0% |
| ! | ATCTAAGTTTCTGATATAGA+AGG | - | chr8_1:10590411-10590430 | None:intergenic | 25.0% |
| ! | TTCACAATAAAAATCTTCCA+GGG | - | chr8_1:10590442-10590461 | None:intergenic | 25.0% |
| ! | TTTCACAATAAAAATCTTCC+AGG | - | chr8_1:10590443-10590462 | None:intergenic | 25.0% |
| ! | GAGAAAGTAAAATCTAAAAG+AGG | + | chr8_1:10590487-10590506 | Msa1177980:intron | 25.0% |
| !! | TCTGATCTAATTGATGTTTT+CGG | + | chr8_1:10590592-10590611 | Msa1177980:intron | 25.0% |
| !! | GACCTTTTGTCTTTTATTAA+TGG | + | chr8_1:10590873-10590892 | Msa1177980:CDS | 25.0% |
| ! | TTTATTAATGGAAATGATGG+AGG | + | chr8_1:10590885-10590904 | Msa1177980:CDS | 25.0% |
| !! | AAATAGAAAGTGCACAAATT+AGG | - | chr8_1:10590996-10591015 | None:intergenic | 25.0% |
| ! | TCTATTTAAATGTTACTCCT+TGG | + | chr8_1:10591009-10591028 | Msa1177980:intron | 25.0% |
| !!! | CTTTTAAAATGGGTTTCTTA+TGG | - | chr8_1:10591035-10591054 | None:intergenic | 25.0% |
| !!! | GTAATGTTCGTCTTTTAAAA+TGG | - | chr8_1:10591046-10591065 | None:intergenic | 25.0% |
| !!! | TACAATGACATCATTTTTAG+CGG | - | chr8_1:10591106-10591125 | None:intergenic | 25.0% |
| ! | GATGTCATTGTAAAATTAAG+AGG | + | chr8_1:10591114-10591133 | Msa1177980:intron | 25.0% |
| ! | ATGTTTGTCTTATAGAAAAG+GGG | - | chr8_1:10591238-10591257 | None:intergenic | 25.0% |
| ! | TTATTACCGATAAATTGTTG+TGG | + | chr8_1:10591409-10591428 | Msa1177980:intron | 25.0% |
| ! | AATTTGCCACAACAATTTAT+CGG | - | chr8_1:10591418-10591437 | None:intergenic | 25.0% |
| !! | GATACAAGTTTTTATTATCG+TGG | + | chr8_1:10591532-10591551 | Msa1177980:intron | 25.0% |
| ! | CAAATGATGTGACAATATAA+GGG | - | chr8_1:10591587-10591606 | None:intergenic | 25.0% |
| ! | CTTATATTGTCACATCATTT+GGG | + | chr8_1:10591586-10591605 | Msa1177980:intron | 25.0% |
| ! | TTATACACTGCTAAATCATT+TGG | + | chr8_1:10591888-10591907 | Msa1177980:intron | 25.0% |
| !!! | TTTGTTTGCCACTATTTTTT+TGG | + | chr8_1:10592268-10592287 | Msa1177980:intron | 25.0% |
| ! | TCTAATGTCCAAAAAAATAG+TGG | - | chr8_1:10592279-10592298 | None:intergenic | 25.0% |
| ! | AGGATAAAGTTTAATCATTC+TGG | - | chr8_1:10592388-10592407 | None:intergenic | 25.0% |
| !! | TTTTATTACCTAAAATGACC+TGG | - | chr8_1:10592518-10592537 | None:intergenic | 25.0% |
| !! | AAAAAGTCTTTTATTCTCTC+TGG | - | chr8_1:10592683-10592702 | None:intergenic | 25.0% |
| ! | TTATTGAAGTTCAACTAGAA+AGG | - | chr8_1:10592803-10592822 | None:intergenic | 25.0% |
| ! | GAAAAACTTTGTTGCATAAT+AGG | + | chr8_1:10592857-10592876 | Msa1177980:intron | 25.0% |
| ! | CAATGATATTCAAAAGGAAA+AGG | - | chr8_1:10592911-10592930 | None:intergenic | 25.0% |
| ! | GAAAATAGCAAAACCAAAAT+TGG | - | chr8_1:10592988-10593007 | None:intergenic | 25.0% |
| AAATCTATGTGATGATTACG+AGG | + | chr8_1:10586580-10586599 | Msa1177980:intron | 30.0% | |
| GGTTAGTGATGTTACTAATT+TGG | + | chr8_1:10586717-10586736 | Msa1177980:intron | 30.0% | |
| GCTGAATTATTGAAAGTAAC+AGG | + | chr8_1:10586919-10586938 | Msa1177980:intron | 30.0% | |
| TGGAAAGTGAAAATCTGATT+TGG | + | chr8_1:10586975-10586994 | Msa1177980:intron | 30.0% | |
| GGAAAGTGAAAATCTGATTT+GGG | + | chr8_1:10586976-10586995 | Msa1177980:intron | 30.0% | |
| !!! | TTTTAGGGTGTATTACTGAA+TGG | + | chr8_1:10587006-10587025 | Msa1177980:intron | 30.0% |
| AGATTCTTCACCCAAATTTA+GGG | + | chr8_1:10587139-10587158 | Msa1177980:intron | 30.0% | |
| CAAACGTACACATAAAATCA+AGG | - | chr8_1:10587439-10587458 | None:intergenic | 30.0% | |
| TACACTTGGCATAACATTAT+TGG | - | chr8_1:10587468-10587487 | None:intergenic | 30.0% | |
| !! | TTTGATTTCACTTTTGTGAG+AGG | + | chr8_1:10587599-10587618 | Msa1177980:intron | 30.0% |
| TGTGATGAACAATCAATTTC+TGG | - | chr8_1:10587738-10587757 | None:intergenic | 30.0% | |
| AGGTGGGAAAGTTAAAATTA+AGG | + | chr8_1:10587897-10587916 | Msa1177980:intron | 30.0% | |
| ! | CCTAAGAAGTAGATTTTTCA+TGG | - | chr8_1:10587982-10588001 | None:intergenic | 30.0% |
| CCATGAAAAATCTACTTCTT+AGG | + | chr8_1:10587979-10587998 | Msa1177980:intron | 30.0% | |
| ACTGTATTTAGCACAAATAC+TGG | - | chr8_1:10588047-10588066 | None:intergenic | 30.0% | |
| TATTTGTGCTAAATACAGTG+TGG | + | chr8_1:10588048-10588067 | Msa1177980:intron | 30.0% | |
| TGCTGTTCTTAAATTATGGA+TGG | - | chr8_1:10588077-10588096 | None:intergenic | 30.0% | |
| CACATATTAACTTCTTATCC+AGG | + | chr8_1:10588139-10588158 | Msa1177980:intron | 30.0% | |
| TATCATGCAGCAAGTTAAAT+AGG | - | chr8_1:10588201-10588220 | None:intergenic | 30.0% | |
| CTTTACAAACAATACAACCT+CGG | - | chr8_1:10588341-10588360 | None:intergenic | 30.0% | |
| TACAGAAAGATATCATACCT+CGG | - | chr8_1:10588439-10588458 | None:intergenic | 30.0% | |
| ! | GTAATATTTGATGGCATCAT+TGG | + | chr8_1:10588611-10588630 | Msa1177980:intron | 30.0% |
| AAACAGCCATAAATGCATTA+TGG | - | chr8_1:10588674-10588693 | None:intergenic | 30.0% | |
| ATGCATTTATGGCTGTTTAA+AGG | + | chr8_1:10588676-10588695 | Msa1177980:intron | 30.0% | |
| ! | TTGGGATTCAATTTTGTATG+GGG | - | chr8_1:10588720-10588739 | None:intergenic | 30.0% |
| ! | GATTGGGATTCAATTTTGTA+TGG | - | chr8_1:10588722-10588741 | None:intergenic | 30.0% |
| !!! | AATCTGTGATTTTTGAAACG+GGG | - | chr8_1:10588744-10588763 | None:intergenic | 30.0% |
| !! | GTTACTGTGTTTTGCTTTTA+AGG | + | chr8_1:10588868-10588887 | Msa1177980:intron | 30.0% |
| CACCTTAATCTATTTAAGGA+TGG | + | chr8_1:10588928-10588947 | Msa1177980:intron | 30.0% | |
| CACCATCCTTAAATAGATTA+AGG | - | chr8_1:10588933-10588952 | None:intergenic | 30.0% | |
| TATTTAAGGATGGTGATTCT+AGG | + | chr8_1:10588938-10588957 | Msa1177980:intron | 30.0% | |
| ATTTAAGGATGGTGATTCTA+GGG | + | chr8_1:10588939-10588958 | Msa1177980:intron | 30.0% | |
| GTAATTTAACAGATCATGCA+TGG | - | chr8_1:10588995-10589014 | None:intergenic | 30.0% | |
| GCATGATCTGTTAAATTACA+CGG | + | chr8_1:10588996-10589015 | Msa1177980:intron | 30.0% | |
| AAAGAGAAGTCTTCAATGAT+AGG | - | chr8_1:10589274-10589293 | None:intergenic | 30.0% | |
| TGTGATATTTGTTCAGACTA+GGG | - | chr8_1:10589623-10589642 | None:intergenic | 30.0% | |
| ! | TCGGTGATTTTCTTTTGTAT+AGG | + | chr8_1:10589654-10589673 | Msa1177980:intron | 30.0% |
| CTTATGATGAGAAATTCGTT+AGG | + | chr8_1:10589686-10589705 | Msa1177980:CDS | 30.0% | |
| AATAATTGAAGGAAGATCAC+CGG | + | chr8_1:10589801-10589820 | Msa1177980:CDS | 30.0% | |
| !! | GTATGCCGATTATATTTTCT+TGG | + | chr8_1:10589892-10589911 | Msa1177980:intron | 30.0% |
| TCATCAGTTATGTTTCTCAA+GGG | - | chr8_1:10589972-10589991 | None:intergenic | 30.0% | |
| ATCATCAGTTATGTTTCTCA+AGG | - | chr8_1:10589973-10589992 | None:intergenic | 30.0% | |
| !! | ATTGTTGTATTGGTTCAACA+TGG | - | chr8_1:10590247-10590266 | None:intergenic | 30.0% |
| TTGTCAAGCTATTGTTGTAT+TGG | - | chr8_1:10590257-10590276 | None:intergenic | 30.0% | |
| AACTTAGATATAAAAAGCCC+TGG | + | chr8_1:10590422-10590441 | Msa1177980:intron | 30.0% | |
| GATTGTAGACAAAATGAGAT+AGG | + | chr8_1:10590566-10590585 | Msa1177980:intron | 30.0% | |
| ACTAGAGCTTGAAATTTGAA+GGG | - | chr8_1:10590646-10590665 | None:intergenic | 30.0% | |
| AACTAGAGCTTGAAATTTGA+AGG | - | chr8_1:10590647-10590666 | None:intergenic | 30.0% | |
| !! | CAACATTCTGAAACATGAAA+GGG | - | chr8_1:10590815-10590834 | None:intergenic | 30.0% |
| !! | TCAACATTCTGAAACATGAA+AGG | - | chr8_1:10590816-10590835 | None:intergenic | 30.0% |
| TTTCATGTTTCAGAATGTTG+AGG | + | chr8_1:10590815-10590834 | Msa1177980:intron | 30.0% | |
| !!! | ACAATGACATCATTTTTAGC+GGG | - | chr8_1:10591105-10591124 | None:intergenic | 30.0% |
| ! | TCTCAATTTTATGACAGACT+AGG | + | chr8_1:10591176-10591195 | Msa1177980:intron | 30.0% |
| AGTTAGGGATTGTAAAGTTA+GGG | - | chr8_1:10591317-10591336 | None:intergenic | 30.0% | |
| ATTTATCGGTAATAACCCTT+CGG | - | chr8_1:10591404-10591423 | None:intergenic | 30.0% | |
| AAATTGTTGTGGCAAATTTG+TGG | + | chr8_1:10591420-10591439 | Msa1177980:intron | 30.0% | |
| AATTGTTGTGGCAAATTTGT+GGG | + | chr8_1:10591421-10591440 | Msa1177980:intron | 30.0% | |
| CCAAATGATGTGACAATATA+AGG | - | chr8_1:10591588-10591607 | None:intergenic | 30.0% | |
| CCTTATATTGTCACATCATT+TGG | + | chr8_1:10591585-10591604 | Msa1177980:intron | 30.0% | |
| ! | TCGGTTCTTCTTTTTATTCT+TGG | - | chr8_1:10591783-10591802 | None:intergenic | 30.0% |
| AGAATAAAAAGAAGAACCGA+AGG | + | chr8_1:10591783-10591802 | Msa1177980:CDS | 30.0% | |
| TCAAAGAAGAATTCTTCTGT+TGG | - | chr8_1:10591817-10591836 | None:intergenic | 30.0% | |
| ACAGAAGAATTCTTCTTTGA+AGG | + | chr8_1:10591817-10591836 | Msa1177980:CDS | 30.0% | |
| TTTACAACAACCTTCTTATG+TGG | - | chr8_1:10591854-10591873 | None:intergenic | 30.0% | |
| TGAATGAACATAGAGTCTAT+TGG | + | chr8_1:10591925-10591944 | Msa1177980:intron | 30.0% | |
| AGATGATGATATAGATGATC+CGG | + | chr8_1:10592117-10592136 | Msa1177980:CDS | 30.0% | |
| TAAAAGCAAAAATTGACAGG+TGG | + | chr8_1:10592143-10592162 | Msa1177980:intron | 30.0% | |
| AAAAGCAAAAATTGACAGGT+GGG | + | chr8_1:10592144-10592163 | Msa1177980:intron | 30.0% | |
| ! | TTTTTGTATTCTAGCCAGTT+AGG | + | chr8_1:10592219-10592238 | Msa1177980:intron | 30.0% |
| AAATGACCTGGTAAAAAACA+TGG | - | chr8_1:10592506-10592525 | None:intergenic | 30.0% | |
| !!! | GTTTTTTACCAGGTCATTTT+AGG | + | chr8_1:10592507-10592526 | Msa1177980:intron | 30.0% |
| TCAAAAGGAAAAGGCAAAAT+GGG | - | chr8_1:10592902-10592921 | None:intergenic | 30.0% | |
| TTCAAAAGGAAAAGGCAAAA+TGG | - | chr8_1:10592903-10592922 | None:intergenic | 30.0% | |
| ! | TTTTTGAACCTTCTGCATTT+TGG | + | chr8_1:10592938-10592957 | Msa1177980:three_prime_UTR | 30.0% |
| AACCATATCATCAAAACTAG+TGG | - | chr8_1:10592965-10592984 | None:intergenic | 30.0% | |
| ! | TGATGATATGGTTCCAATTT+TGG | + | chr8_1:10592972-10592991 | Msa1177980:three_prime_UTR | 30.0% |
| ! | AGTTGGCAATTTTTGTGACT+GGG | - | chr8_1:10586323-10586342 | None:intergenic | 35.0% |
| CTGAAGTGAGATTATTGATC+TGG | + | chr8_1:10586862-10586881 | Msa1177980:intron | 35.0% | |
| ! | GGCTTTTATCACCAGAATTA+TGG | + | chr8_1:10587097-10587116 | Msa1177980:intron | 35.0% |
| ! | TATGGTAGCTAGTTGCATTT+TGG | + | chr8_1:10587115-10587134 | Msa1177980:intron | 35.0% |
| ! | ATGGTAGCTAGTTGCATTTT+GGG | + | chr8_1:10587116-10587135 | Msa1177980:intron | 35.0% |
| GAGATTCTTCACCCAAATTT+AGG | + | chr8_1:10587138-10587157 | Msa1177980:intron | 35.0% | |
| CACATAAAATCAAGGAAGCT+TGG | - | chr8_1:10587431-10587450 | None:intergenic | 35.0% | |
| ! | TGAATCATAACAGCTTTGGT+AGG | + | chr8_1:10587506-10587525 | Msa1177980:intron | 35.0% |
| ! | TGGATTTGAAGTTTGCGATT+TGG | + | chr8_1:10587684-10587703 | Msa1177980:intron | 35.0% |
| TGGCTACAAATCATGTTTAG+AGG | - | chr8_1:10587718-10587737 | None:intergenic | 35.0% | |
| ! | TTTTTCTTTCGTTGCGTGTT+TGG | - | chr8_1:10587857-10587876 | None:intergenic | 35.0% |
| ACTGATGTATTATCCGTGTA+AGG | + | chr8_1:10587877-10587896 | Msa1177980:intron | 35.0% | |
| ATGTATTATCCGTGTAAGGT+GGG | + | chr8_1:10587881-10587900 | Msa1177980:intron | 35.0% | |
| ! | TTTAACTTTCCCACCTTACA+CGG | - | chr8_1:10587893-10587912 | None:intergenic | 35.0% |
| !!! | CATGGTTGTTTTTGGTCATA+CGG | - | chr8_1:10587964-10587983 | None:intergenic | 35.0% |
| ACAGAAAGATATCATACCTC+GGG | - | chr8_1:10588438-10588457 | None:intergenic | 35.0% | |
| !! | GTTTAAGGTGTACTTTTTGG+TGG | + | chr8_1:10588520-10588539 | Msa1177980:intron | 35.0% |
| AATGCATTATGGTTCACGAA+TGG | - | chr8_1:10588663-10588682 | None:intergenic | 35.0% | |
| CGTGAACCATAATGCATTTA+TGG | + | chr8_1:10588665-10588684 | Msa1177980:intron | 35.0% | |
| !!! | TGATTTTTGAAACGGGGATT+GGG | - | chr8_1:10588738-10588757 | None:intergenic | 35.0% |
| TTCTCTATGACCGTTGTAAA+TGG | + | chr8_1:10589193-10589212 | Msa1177980:intron | 35.0% | |
| AAGTGCACAACCATTTACAA+CGG | - | chr8_1:10589206-10589225 | None:intergenic | 35.0% | |
| ! | CACTTGTTGGATTGATTCAT+CGG | - | chr8_1:10589383-10589402 | None:intergenic | 35.0% |
| AAGACATACTGCACAATTCT+TGG | - | chr8_1:10589473-10589492 | None:intergenic | 35.0% | |
| AGAATTAAGCTCAACATTGC+AGG | - | chr8_1:10589511-10589530 | None:intergenic | 35.0% | |
| !! | TGTCGATTTCATCAAGTACT+AGG | + | chr8_1:10589538-10589557 | Msa1177980:CDS | 35.0% |
| ! | ATTGAAGAACCTTGTTTGAG+CGG | - | chr8_1:10589564-10589583 | None:intergenic | 35.0% |
| TCTTCAATGCTCTTATCTTG+TGG | + | chr8_1:10589576-10589595 | Msa1177980:intron | 35.0% | |
| CTGTGATATTTGTTCAGACT+AGG | - | chr8_1:10589624-10589643 | None:intergenic | 35.0% | |
| CTAGTCTGAACAAATATCAC+AGG | + | chr8_1:10589622-10589641 | Msa1177980:intron | 35.0% | |
| ATATCACAGGTTATCTCACT+CGG | + | chr8_1:10589635-10589654 | Msa1177980:intron | 35.0% | |
| ! | TTCTTTTGTATAGGAACGGA+AGG | + | chr8_1:10589663-10589682 | Msa1177980:intron | 35.0% |
| AATATATCACGTATCTCCTC+CGG | - | chr8_1:10589823-10589842 | None:intergenic | 35.0% | |
| CTCACACATTCTTATAATCC+AGG | + | chr8_1:10589932-10589951 | Msa1177980:intron | 35.0% | |
| GAAACATAACTGATGATCCA+AGG | + | chr8_1:10589976-10589995 | Msa1177980:CDS | 35.0% | |
| TAACTGATGATCCAAGGATA+AGG | + | chr8_1:10589982-10590001 | Msa1177980:CDS | 35.0% | |
| TTTAAGCTCTTTCCTCTTCT+TGG | - | chr8_1:10590027-10590046 | None:intergenic | 35.0% | |
| TTGATCTTCACATTTCGCAT+TGG | - | chr8_1:10590157-10590176 | None:intergenic | 35.0% | |
| GTGAAGATCAATGTTGTCAA+TGG | + | chr8_1:10590166-10590185 | Msa1177980:intron | 35.0% | |
| TCAATGTTGTCAATGGTGTA+TGG | + | chr8_1:10590173-10590192 | Msa1177980:intron | 35.0% | |
| TGCAATCTGACACAAAACTA+AGG | - | chr8_1:10590216-10590235 | None:intergenic | 35.0% | |
| !!! | TAGTTTTGTGTCAGATTGCA+TGG | + | chr8_1:10590216-10590235 | Msa1177980:intron | 35.0% |
| ! | GAACACTTATTAGCTCTTCA+AGG | + | chr8_1:10590353-10590372 | Msa1177980:intron | 35.0% |
| CTTCAAGGTGAGTGAATATA+AGG | + | chr8_1:10590368-10590387 | Msa1177980:intron | 35.0% | |
| ATCTAAAAGAGGGCAACTAA+CGG | + | chr8_1:10590498-10590517 | Msa1177980:intron | 35.0% | |
| AGCTGAAACTGTTAACATTG+CGG | + | chr8_1:10590532-10590551 | Msa1177980:intron | 35.0% | |
| ! | CTAATTGATGTTTTCGGCAA+AGG | + | chr8_1:10590598-10590617 | Msa1177980:intron | 35.0% |
| TAGAGCTTGAAATTTGAAGG+GGG | - | chr8_1:10590644-10590663 | None:intergenic | 35.0% | |
| CTAGAGCTTGAAATTTGAAG+GGG | - | chr8_1:10590645-10590664 | None:intergenic | 35.0% | |
| ACTTTCTATCTGATGTTACG+AGG | + | chr8_1:10591064-10591083 | Msa1177980:intron | 35.0% | |
| GTCTGTCATAAAATTGAGAC+TGG | - | chr8_1:10591175-10591194 | None:intergenic | 35.0% | |
| CAGTTAGGGATTGTAAAGTT+AGG | - | chr8_1:10591318-10591337 | None:intergenic | 35.0% | |
| CTAACTTTACAATCCCTAAC+TGG | + | chr8_1:10591316-10591335 | Msa1177980:intron | 35.0% | |
| AGCACATCATTAACGAACTT+TGG | - | chr8_1:10591560-10591579 | None:intergenic | 35.0% | |
| ! | AATTTTGTCACAGATCCGAA+GGG | + | chr8_1:10591746-10591765 | Msa1177980:intron | 35.0% |
| !! | TTGGAAGTTTTAATCCCCTT+CGG | - | chr8_1:10591764-10591783 | None:intergenic | 35.0% |
| !!! | TCTGTTGGTCTTTTTTCCTT+CGG | - | chr8_1:10591802-10591821 | None:intergenic | 35.0% |
| ATCATCTGTACCACATAAGA+AGG | + | chr8_1:10591841-10591860 | Msa1177980:CDS | 35.0% | |
| GTATGTATGGTGTAAACTTG+AGG | - | chr8_1:10592056-10592075 | None:intergenic | 35.0% | |
| AAAGACGATAACTACCTAAC+TGG | - | chr8_1:10592236-10592255 | None:intergenic | 35.0% | |
| AAGGACTAAAACATATGCAC+AGG | + | chr8_1:10592354-10592373 | Msa1177980:intron | 35.0% | |
| TAAAACATATGCACAGGACA+AGG | + | chr8_1:10592360-10592379 | Msa1177980:intron | 35.0% | |
| !!! | TACCTTCCATGTTTTTTACC+AGG | + | chr8_1:10592497-10592516 | Msa1177980:intron | 35.0% |
| !! | TGTATGTTACTTTGTGATGC+AGG | + | chr8_1:10592618-10592637 | Msa1177980:intron | 35.0% |
| !! | GTATGTTACTTTGTGATGCA+GGG | + | chr8_1:10592619-10592638 | Msa1177980:intron | 35.0% |
| CCAGTTAGAATTTAATCTGC+GGG | - | chr8_1:10592660-10592679 | None:intergenic | 35.0% | |
| GCCAGTTAGAATTTAATCTG+CGG | - | chr8_1:10592661-10592680 | None:intergenic | 35.0% | |
| !! | ACGATGCTTTTTACTACCAA+TGG | + | chr8_1:10592725-10592744 | Msa1177980:CDS | 35.0% |
| !! | CGATGCTTTTTACTACCAAT+GGG | + | chr8_1:10592726-10592745 | Msa1177980:CDS | 35.0% |
| ! | CTTTTTACTACCAATGGGAA+TGG | + | chr8_1:10592731-10592750 | Msa1177980:CDS | 35.0% |
| CAAAAGGAAAAGGCAAAATG+GGG | - | chr8_1:10592901-10592920 | None:intergenic | 35.0% | |
| !!! | GTCCACTAGTTTTGATGATA+TGG | + | chr8_1:10592960-10592979 | Msa1177980:three_prime_UTR | 35.0% |
| ! | GAGTTGGCAATTTTTGTGAC+TGG | - | chr8_1:10586324-10586343 | None:intergenic | 40.0% |
| AAGAGAGAGAAAGTGAGAGT+TGG | - | chr8_1:10586340-10586359 | None:intergenic | 40.0% | |
| ATCCATTTCTCTTCACTCCA+AGG | + | chr8_1:10586378-10586397 | Msa1177980:five_prime_UTR | 40.0% | |
| TACCTTGGAGTGAAGAGAAA+TGG | - | chr8_1:10586383-10586402 | None:intergenic | 40.0% | |
| ATTGATGAACACGTGTACCT+TGG | - | chr8_1:10586398-10586417 | None:intergenic | 40.0% | |
| !!! | TGATTTGGGATGCTGCTTTT+AGG | + | chr8_1:10586990-10587009 | Msa1177980:intron | 40.0% |
| !!! | GATTTGGGATGCTGCTTTTA+GGG | + | chr8_1:10586991-10587010 | Msa1177980:intron | 40.0% |
| GCAACTAGCTACCATAATTC+TGG | - | chr8_1:10587111-10587130 | None:intergenic | 40.0% | |
| !! | ACTCTACTTGAGAGTACCAA+AGG | + | chr8_1:10587360-10587379 | Msa1177980:intron | 40.0% |
| !! | CTCTACTTGAGAGTACCAAA+GGG | + | chr8_1:10587361-10587380 | Msa1177980:intron | 40.0% |
| AAGGAAGCTTGGATCACTAA+GGG | - | chr8_1:10587420-10587439 | None:intergenic | 40.0% | |
| AGCATATGAGCAAGTACACT+TGG | - | chr8_1:10587482-10587501 | None:intergenic | 40.0% | |
| !! | AGTGTAATTGCTTTTCCGAG+TGG | + | chr8_1:10587664-10587683 | Msa1177980:intron | 40.0% |
| TCGCAAACTTCAAATCCACT+CGG | - | chr8_1:10587682-10587701 | None:intergenic | 40.0% | |
| !!! | TCGTTGCGTGTTTGGTTTTA+TGG | - | chr8_1:10587849-10587868 | None:intergenic | 40.0% |
| GATGTATTATCCGTGTAAGG+TGG | + | chr8_1:10587880-10587899 | Msa1177980:intron | 40.0% | |
| AAATACTGGCATCAACAACG+CGG | - | chr8_1:10588033-10588052 | None:intergenic | 40.0% | |
| CAGAATGAAGATTTGACACC+TGG | - | chr8_1:10588160-10588179 | None:intergenic | 40.0% | |
| TACTGTGATGCAGATTTGTG+TGG | + | chr8_1:10588221-10588240 | Msa1177980:intron | 40.0% | |
| !!! | GTGATTTTTGAAACGGGGAT+TGG | - | chr8_1:10588739-10588758 | None:intergenic | 40.0% |
| ! | ATTTAGCGCTGAAATGACTC+TGG | + | chr8_1:10588896-10588915 | Msa1177980:intron | 40.0% |
| AAATGGTTGTGCACTTGTCT+TGG | + | chr8_1:10589210-10589229 | Msa1177980:intron | 40.0% | |
| ! | AGATGATGAAGCCTTATGTG+TGG | + | chr8_1:10589347-10589366 | Msa1177980:intron | 40.0% |
| ! | GAAGTTTGAAGCCACACATA+AGG | - | chr8_1:10589361-10589380 | None:intergenic | 40.0% |
| CGATGAATCAATCCAACAAG+TGG | + | chr8_1:10589381-10589400 | Msa1177980:CDS | 40.0% | |
| CAATCTCTTGTTCCACTTGT+TGG | - | chr8_1:10589396-10589415 | None:intergenic | 40.0% | |
| !! | CAACCAATGGCTTTAACTGA+AGG | - | chr8_1:10589756-10589775 | None:intergenic | 40.0% |
| GCTCTTGCTCGAATAATTGA+AGG | + | chr8_1:10589790-10589809 | Msa1177980:CDS | 40.0% | |
| TTTGCCTGATGATCTTACAG+AGG | + | chr8_1:10589846-10589865 | Msa1177980:CDS | 40.0% | |
| TATAATCCAGGAAGAGAAGC+TGG | + | chr8_1:10589944-10589963 | Msa1177980:intron | 40.0% | |
| TCCTCTTCTTGGCATACAAT+CGG | - | chr8_1:10590016-10590035 | None:intergenic | 40.0% | |
| ! | TAAAGAGCGTGAGAGGATAA+AGG | + | chr8_1:10590043-10590062 | Msa1177980:CDS | 40.0% |
| AACTAAGGACGTTACCATGT+TGG | - | chr8_1:10590201-10590220 | None:intergenic | 40.0% | |
| GCTGAAACTGTTAACATTGC+GGG | + | chr8_1:10590533-10590552 | Msa1177980:intron | 40.0% | |
| TGAAATTTGAAGGGGGAATC+AGG | - | chr8_1:10590637-10590656 | None:intergenic | 40.0% | |
| GGTGCATCTTTGAATAGGAA+CGG | - | chr8_1:10590710-10590729 | None:intergenic | 40.0% | |
| TCCTATTCAAAGATGCACCA+CGG | + | chr8_1:10590711-10590730 | Msa1177980:intron | 40.0% | |
| ATCTAGACCTATGTTGTCGA+TGG | - | chr8_1:10590738-10590757 | None:intergenic | 40.0% | |
| ! | AAATGGGTTTCTTATGGCCA+AGG | - | chr8_1:10591029-10591048 | None:intergenic | 40.0% |
| TTCTATCTGATGTTACGAGG+AGG | + | chr8_1:10591067-10591086 | Msa1177980:intron | 40.0% | |
| !!! | ATGACATCATTTTTAGCGGG+AGG | - | chr8_1:10591102-10591121 | None:intergenic | 40.0% |
| TGCAACTAGCAATGCTATAC+AGG | - | chr8_1:10591638-10591657 | None:intergenic | 40.0% | |
| !!! | TTCCTTTTTGACTTCCTGAC+TGG | + | chr8_1:10591715-10591734 | Msa1177980:intron | 40.0% |
| AAAATTCTTCACCTCCAGTC+AGG | - | chr8_1:10591732-10591751 | None:intergenic | 40.0% | |
| ! | GAATTTTGTCACAGATCCGA+AGG | + | chr8_1:10591745-10591764 | Msa1177980:intron | 40.0% |
| ! | ATTTTGTCACAGATCCGAAG+GGG | + | chr8_1:10591747-10591766 | Msa1177980:intron | 40.0% |
| ! | TTCCTTCTCTAGGAGGTAAA+TGG | + | chr8_1:10591983-10592002 | Msa1177980:intron | 40.0% |
| TGTAAACTTGAGGTCTCACA+CGG | - | chr8_1:10592046-10592065 | None:intergenic | 40.0% | |
| CCATAGGATCATCGTATGTA+TGG | - | chr8_1:10592069-10592088 | None:intergenic | 40.0% | |
| CCATACATACGATGATCCTA+TGG | + | chr8_1:10592066-10592085 | Msa1177980:CDS | 40.0% | |
| TCATCATCGAACTCAACCAT+AGG | - | chr8_1:10592085-10592104 | None:intergenic | 40.0% | |
| GACCTGGTAAAAAACATGGA+AGG | - | chr8_1:10592502-10592521 | None:intergenic | 40.0% | |
| CCCGCAGATTAAATTCTAAC+TGG | + | chr8_1:10592657-10592676 | Msa1177980:CDS | 40.0% | |
| ! | AGACTTTTTGTCATCCTCAC+AGG | + | chr8_1:10592694-10592713 | Msa1177980:CDS | 40.0% |
| ! | TTTTGTCATCCTCACAGGAA+AGG | + | chr8_1:10592699-10592718 | Msa1177980:CDS | 40.0% |
| AAGTTTGTCCTCTCTCCCTT+TGG | - | chr8_1:10587379-10587398 | None:intergenic | 45.0% | |
| AGGAAGCTTGGATCACTAAG+GGG | - | chr8_1:10587419-10587438 | None:intergenic | 45.0% | |
| CAAGGAAGCTTGGATCACTA+AGG | - | chr8_1:10587421-10587440 | None:intergenic | 45.0% | |
| TGGCACTGCAAATTCTCCAA+GGG | + | chr8_1:10588241-10588260 | Msa1177980:five_prime_UTR | 45.0% | |
| TTCAAAGGGCTTCTGCAATC+AGG | - | chr8_1:10588306-10588325 | None:intergenic | 45.0% | |
| TGATTGCAGAAGCCCTTTGA+AGG | + | chr8_1:10588305-10588324 | Msa1177980:five_prime_UTR | 45.0% | |
| GATTGCAGAAGCCCTTTGAA+GGG | + | chr8_1:10588306-10588325 | Msa1177980:five_prime_UTR | 45.0% | |
| GGTTATGTCCTCCCTTCAAA+GGG | - | chr8_1:10588320-10588339 | None:intergenic | 45.0% | |
| TCCGATGTCAGAAACTGACA+TGG | + | chr8_1:10588401-10588420 | Msa1177980:exon | 45.0% | |
| GCCATGTCAGTTTCTGACAT+CGG | - | chr8_1:10588405-10588424 | None:intergenic | 45.0% | |
| CATGGCAGTTATTAAACCCG+AGG | + | chr8_1:10588419-10588438 | Msa1177980:CDS | 45.0% | |
| ! | TAAGGATGGTGATTCTAGGG+AGG | + | chr8_1:10588942-10588961 | Msa1177980:intron | 45.0% |
| ! | AGTGATTTGTATGAGCCCTG+AGG | - | chr8_1:10589107-10589126 | None:intergenic | 45.0% |
| ! | TTCGAATCCCTGAGTTTGCT+TGG | + | chr8_1:10589140-10589159 | Msa1177980:intron | 45.0% |
| GAGACTACCAAGCAAACTCA+GGG | - | chr8_1:10589150-10589169 | None:intergenic | 45.0% | |
| AGAGACTACCAAGCAAACTC+AGG | - | chr8_1:10589151-10589170 | None:intergenic | 45.0% | |
| !! | ATTGCAGGACTGACTTGTTG+AGG | - | chr8_1:10589496-10589515 | None:intergenic | 45.0% |
| CAGCCTTCAGTTAAAGCCAT+TGG | + | chr8_1:10589750-10589769 | Msa1177980:CDS | 45.0% | |
| AATTGAAGGAAGATCACCGG+AGG | + | chr8_1:10589804-10589823 | Msa1177980:CDS | 45.0% | |
| GACACCTCTGTAAGATCATC+AGG | - | chr8_1:10589853-10589872 | None:intergenic | 45.0% | |
| !! | GATGATCTTACAGAGGTGTC+TGG | + | chr8_1:10589853-10589872 | Msa1177980:CDS | 45.0% |
| ! | CGGTTCAAAAGCCTTATCCT+TGG | - | chr8_1:10589996-10590015 | None:intergenic | 45.0% |
| ACCGATTGTATGCCAAGAAG+AGG | + | chr8_1:10590012-10590031 | Msa1177980:CDS | 45.0% | |
| ! | AAGAGCTTAAAGAGCGTGAG+AGG | + | chr8_1:10590036-10590055 | Msa1177980:CDS | 45.0% |
| AATGGTGTATGGCACCAACA+TGG | + | chr8_1:10590184-10590203 | Msa1177980:intron | 45.0% | |
| AAAAGAGGGCAACTAACGGT+AGG | + | chr8_1:10590502-10590521 | Msa1177980:intron | 45.0% | |
| TCCGTGGTGCATCTTTGAAT+AGG | - | chr8_1:10590715-10590734 | None:intergenic | 45.0% | |
| CTTACATCTTGACCGAACTC+TGG | + | chr8_1:10591362-10591381 | Msa1177980:intron | 45.0% | |
| TGACCGAACTCTGGATTATC+AGG | + | chr8_1:10591371-10591390 | Msa1177980:intron | 45.0% | |
| GACCGAACTCTGGATTATCA+GGG | + | chr8_1:10591372-10591391 | Msa1177980:intron | 45.0% | |
| ATTATCAGGGCCATTACCGA+AGG | + | chr8_1:10591385-10591404 | Msa1177980:intron | 45.0% | |
| TTATCAGGGCCATTACCGAA+GGG | + | chr8_1:10591386-10591405 | Msa1177980:intron | 45.0% | |
| CGGTAATAACCCTTCGGTAA+TGG | - | chr8_1:10591398-10591417 | None:intergenic | 45.0% | |
| CTCCAGTCAGGAAGTCAAAA+AGG | - | chr8_1:10591720-10591739 | None:intergenic | 45.0% | |
| !!! | CTTTTTGACTTCCTGACTGG+AGG | + | chr8_1:10591718-10591737 | Msa1177980:intron | 45.0% |
| TCCTAGAGAAGGAAGAAAGG+CGG | - | chr8_1:10591977-10591996 | None:intergenic | 45.0% | |
| ACCTCCTAGAGAAGGAAGAA+AGG | - | chr8_1:10591980-10591999 | None:intergenic | 45.0% | |
| GACCATTTACCTCCTAGAGA+AGG | - | chr8_1:10591988-10592007 | None:intergenic | 45.0% | |
| !! | ATCCTGAGCTATAGCTCTAG+TGG | + | chr8_1:10592454-10592473 | Msa1177980:intron | 45.0% |
| TACTTTGTGATGCAGGGAAG+TGG | + | chr8_1:10592625-10592644 | Msa1177980:intron | 45.0% | |
| ACCAATGGGAATGGCTTTCT+AGG | + | chr8_1:10592740-10592759 | Msa1177980:CDS | 45.0% | |
| CCAATGGGAATGGCTTTCTA+GGG | + | chr8_1:10592741-10592760 | Msa1177980:CDS | 45.0% | |
| GAAAAGGCAAAATGGGGCAT+CGG | - | chr8_1:10592895-10592914 | None:intergenic | 45.0% | |
| ! | CTAGTGGACCAAAATGCAGA+AGG | - | chr8_1:10592949-10592968 | None:intergenic | 45.0% |
| GTGACTATGCACAGCTTGAT+TGG | - | chr8_1:10593040-10593059 | None:intergenic | 45.0% | |
| !! | TGAGAGTACCAAAGGGAGAG+AGG | + | chr8_1:10587368-10587387 | Msa1177980:intron | 50.0% |
| GTGGCACTGCAAATTCTCCA+AGG | + | chr8_1:10588240-10588259 | Msa1177980:five_prime_UTR | 50.0% | |
| CTCAAATGCACGATGTCCCT+TGG | - | chr8_1:10588260-10588279 | None:intergenic | 50.0% | |
| CGGTTATGTCCTCCCTTCAA+AGG | - | chr8_1:10588321-10588340 | None:intergenic | 50.0% | |
| TTGAAGGGAGGACATAACCG+AGG | + | chr8_1:10588321-10588340 | Msa1177980:five_prime_UTR | 50.0% | |
| TGCAAAGCCATCTTGCCTCA+GGG | + | chr8_1:10589089-10589108 | Msa1177980:intron | 50.0% | |
| AGTACTAGGCCGCTCAAACA+AGG | + | chr8_1:10589552-10589571 | Msa1177980:CDS | 50.0% | |
| CGACTGGTGAGATCAACCAA+TGG | - | chr8_1:10589769-10589788 | None:intergenic | 50.0% | |
| ! | TATTCGAGCAAGAGCACGAC+TGG | - | chr8_1:10589785-10589804 | None:intergenic | 50.0% |
| GGCAACTAACGGTAGGTTCA+TGG | + | chr8_1:10590509-10590528 | Msa1177980:intron | 50.0% | |
| GGCCCTGATAATCCAGAGTT+CGG | - | chr8_1:10591377-10591396 | None:intergenic | 50.0% | |
| ACCGCCTTTCTTCCTTCTCT+AGG | + | chr8_1:10591973-10591992 | Msa1177980:intron | 50.0% | |
| GCCTTTCTTCCTTCTCTAGG+AGG | + | chr8_1:10591976-10591995 | Msa1177980:intron | 50.0% | |
| TGCCACTAGAGCTATAGCTC+AGG | - | chr8_1:10592459-10592478 | None:intergenic | 50.0% | |
| CATCGTCTTCCTTTCCTGTG+AGG | - | chr8_1:10592711-10592730 | None:intergenic | 50.0% | |
| CCCTAGAAAGCCATTCCCAT+TGG | - | chr8_1:10592744-10592763 | None:intergenic | 50.0% | |
| ! | TGCAGAAGCCCTTTGAAGGG+AGG | + | chr8_1:10588309-10588328 | Msa1177980:five_prime_UTR | 55.0% |
| AGTGTGTGCACACGCGAGAA+GGG | - | chr8_1:10589037-10589056 | None:intergenic | 55.0% | |
| GTGCAAAGCCATCTTGCCTC+AGG | + | chr8_1:10589088-10589107 | Msa1177980:intron | 55.0% | |
| GTATGAGCCCTGAGGCAAGA+TGG | - | chr8_1:10589099-10589118 | None:intergenic | 55.0% | |
| GGTTGTGCACTTGTCTTGGC+TGG | + | chr8_1:10589214-10589233 | Msa1177980:intron | 55.0% | |
| CCTATGTTGTCGATGGTCCG+TGG | - | chr8_1:10590731-10590750 | None:intergenic | 55.0% | |
| CCACGGACCATCGACAACAT+AGG | + | chr8_1:10590728-10590747 | Msa1177980:intron | 55.0% | |
| CAGACTAGGCAAAGTAGCGC+TGG | + | chr8_1:10591190-10591209 | Msa1177980:intron | 55.0% | |
| !! | TAGGCAAAGTAGCGCTGGCA+AGG | + | chr8_1:10591195-10591214 | Msa1177980:intron | 55.0% |
| ! | CATGCTGCTGACTACGCAGA+GGG | - | chr8_1:10592319-10592338 | None:intergenic | 55.0% |
| ! | ACATGCTGCTGACTACGCAG+AGG | - | chr8_1:10592320-10592339 | None:intergenic | 55.0% |
| CAGTGTGTGCACACGCGAGA+AGG | - | chr8_1:10589038-10589057 | None:intergenic | 60.0% | |
| CTTCTCGCGTGTGCACACAC+TGG | + | chr8_1:10589036-10589055 | Msa1177980:intron | 60.0% | |
| AGGGCTCCAGCTTCTCTTCC+TGG | - | chr8_1:10589953-10589972 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 10586287 | 10593078 | 10586287 | ID=Msa1177980;Name=Msa1177980 |
| chr8_1 | mRNA | 10586287 | 10593078 | 10586287 | ID=Msa1177980-mRNA-1;Parent=Msa1177980;Name=Msa1177980-mRNA-1;_AED=0.30;_eAED=0.30;_QI=284|0.88|0.9|1|0.77|0.6|10|234|368 |
| chr8_1 | exon | 10586287 | 10586399 | 10586287 | ID=Msa1177980-mRNA-1:exon:3680;Parent=Msa1177980-mRNA-1 |
| chr8_1 | exon | 10588234 | 10588440 | 10588234 | ID=Msa1177980-mRNA-1:exon:3681;Parent=Msa1177980-mRNA-1 |
| chr8_1 | exon | 10589349 | 10589573 | 10589349 | ID=Msa1177980-mRNA-1:exon:3682;Parent=Msa1177980-mRNA-1 |
| chr8_1 | exon | 10589676 | 10589891 | 10589676 | ID=Msa1177980-mRNA-1:exon:3683;Parent=Msa1177980-mRNA-1 |
| chr8_1 | exon | 10589954 | 10590064 | 10589954 | ID=Msa1177980-mRNA-1:exon:3684;Parent=Msa1177980-mRNA-1 |
| chr8_1 | exon | 10590828 | 10590906 | 10590828 | ID=Msa1177980-mRNA-1:exon:3685;Parent=Msa1177980-mRNA-1 |
| chr8_1 | exon | 10591759 | 10591862 | 10591759 | ID=Msa1177980-mRNA-1:exon:3686;Parent=Msa1177980-mRNA-1 |
| chr8_1 | exon | 10591995 | 10592161 | 10591995 | ID=Msa1177980-mRNA-1:exon:3687;Parent=Msa1177980-mRNA-1 |
| chr8_1 | exon | 10592640 | 10592821 | 10592640 | ID=Msa1177980-mRNA-1:exon:3688;Parent=Msa1177980-mRNA-1 |
| chr8_1 | exon | 10592858 | 10593078 | 10592858 | ID=Msa1177980-mRNA-1:exon:3689;Parent=Msa1177980-mRNA-1 |
| chr8_1 | five_prime_UTR | 10586287 | 10586399 | 10586287 | ID=Msa1177980-mRNA-1:five_prime_utr;Parent=Msa1177980-mRNA-1 |
| chr8_1 | five_prime_UTR | 10588234 | 10588404 | 10588234 | ID=Msa1177980-mRNA-1:five_prime_utr;Parent=Msa1177980-mRNA-1 |
| chr8_1 | CDS | 10588405 | 10588440 | 10588405 | ID=Msa1177980-mRNA-1:cds;Parent=Msa1177980-mRNA-1 |
| chr8_1 | CDS | 10589349 | 10589573 | 10589349 | ID=Msa1177980-mRNA-1:cds;Parent=Msa1177980-mRNA-1 |
| chr8_1 | CDS | 10589676 | 10589891 | 10589676 | ID=Msa1177980-mRNA-1:cds;Parent=Msa1177980-mRNA-1 |
| chr8_1 | CDS | 10589954 | 10590064 | 10589954 | ID=Msa1177980-mRNA-1:cds;Parent=Msa1177980-mRNA-1 |
| chr8_1 | CDS | 10590828 | 10590906 | 10590828 | ID=Msa1177980-mRNA-1:cds;Parent=Msa1177980-mRNA-1 |
| chr8_1 | CDS | 10591759 | 10591862 | 10591759 | ID=Msa1177980-mRNA-1:cds;Parent=Msa1177980-mRNA-1 |
| chr8_1 | CDS | 10591995 | 10592161 | 10591995 | ID=Msa1177980-mRNA-1:cds;Parent=Msa1177980-mRNA-1 |
| chr8_1 | CDS | 10592640 | 10592808 | 10592640 | ID=Msa1177980-mRNA-1:cds;Parent=Msa1177980-mRNA-1 |
| chr8_1 | three_prime_UTR | 10592809 | 10592821 | 10592809 | ID=Msa1177980-mRNA-1:three_prime_utr;Parent=Msa1177980-mRNA-1 |
| chr8_1 | three_prime_UTR | 10592858 | 10593078 | 10592858 | ID=Msa1177980-mRNA-1:three_prime_utr;Parent=Msa1177980-mRNA-1 |
| Gene Sequence |
| Protein sequence |
