AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1179480

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1179480 MtrunA17_Chr8g0342551 95.662 438 18 1 1 438 1 437 0.0 756
Msa1179480 MtrunA17_Chr2g0330051 55.278 360 126 10 83 433 70 403 1.59e-99 303
Msa1179480 MtrunA17_Chr3g0135851 42.605 453 220 11 1 430 1 436 1.31e-78 250
Msa1179480 MtrunA17_Chr4g0025441 40.876 274 141 7 1 263 1 264 2.35e-41 152
Msa1179480 MtrunA17_Chr8g0346021 39.267 191 88 5 89 261 125 305 4.55e-32 128
Msa1179480 MtrunA17_Chr6g0462191 36.184 304 171 8 89 380 105 397 4.47e-30 120
Msa1179480 MtrunA17_Chr1g0200161 37.430 179 106 4 90 265 140 315 9.66e-29 117
Msa1179480 MtrunA17_Chr7g0263731 40.110 182 104 3 89 269 106 283 2.30e-23 102
Msa1179480 MtrunA17_Chr4g0020671 42.446 139 75 2 90 224 100 237 5.54e-23 100
Msa1179480 MtrunA17_Chr2g0316401 32.353 170 111 1 93 262 76 241 1.39e-21 94.7
Msa1179480 MtrunA17_Chr1g0181581 34.555 191 108 4 68 255 100 276 1.46e-21 96.7
Msa1179480 MtrunA17_Chr2g0283321 34.118 170 106 2 93 262 65 228 3.40e-21 93.6
Msa1179480 MtrunA17_Chr1g0204901 44.248 113 50 2 90 189 135 247 5.58e-20 92.0
Msa1179480 MtrunA17_Chr6g0472551 66.129 62 21 0 93 154 119 180 1.64e-18 87.4
Msa1179480 MtrunA17_Chr1g0203711 60.606 66 26 0 86 151 110 175 4.21e-18 86.3
Msa1179480 MtrunA17_Chr8g0340761 50.667 75 37 0 89 163 124 198 8.71e-18 85.1
Msa1179480 MtrunA17_Chr1g0166431 45.690 116 47 3 90 189 116 231 1.05e-17 85.1
Msa1179480 MtrunA17_Chr4g0045641 34.483 145 69 2 90 217 145 280 1.18e-17 85.1
Msa1179480 MtrunA17_Chr8g0389781 56.061 66 29 0 90 155 125 190 4.72e-17 83.2
Msa1179480 MtrunA17_Chr2g0330921 45.098 102 42 2 89 176 95 196 7.17e-17 81.6
Msa1179480 MtrunA17_Chr1g0146931 31.000 200 111 5 89 263 120 317 9.52e-17 82.4
Msa1179480 MtrunA17_Chr8g0371131 50.725 69 34 0 89 157 69 137 1.40e-16 76.3
Msa1179480 MtrunA17_Chr7g0273861 34.783 138 87 1 90 224 124 261 1.41e-16 81.3
Msa1179480 MtrunA17_Chr4g0057321 30.601 183 94 4 1 168 1 165 1.51e-16 81.3
Msa1179480 MtrunA17_Chr4g0060381 50.000 70 35 0 88 157 97 166 3.04e-16 80.9
Msa1179480 MtrunA17_Chr3g0126901 70.370 54 16 0 89 142 110 163 4.26e-16 80.1
Msa1179480 MtrunA17_Chr7g0273951 52.239 67 32 0 93 159 108 174 7.45e-15 75.9
Msa1179480 MtrunA17_Chr1g0172611 32.576 132 82 1 93 217 107 238 2.46e-14 74.3
Msa1179480 MtrunA17_Chr5g0416161 41.304 92 52 1 66 157 96 185 1.57e-13 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1179480 AT1G72670.1 43.908 435 192 13 1 421 1 397 5.28e-85 266
Msa1179480 AT2G26180.1 41.266 395 184 10 1 375 1 367 3.11e-69 226
Msa1179480 AT1G17480.1 40.731 383 165 15 1 370 1 334 7.08e-60 200
Msa1179480 AT3G22190.3 46.535 202 85 5 93 283 90 279 2.23e-35 135
Msa1179480 AT3G22190.2 46.535 202 85 5 93 283 90 279 2.23e-35 135
Msa1179480 AT3G22190.4 46.535 202 85 5 93 283 90 279 2.23e-35 135
Msa1179480 AT3G22190.1 46.535 202 85 5 93 283 90 279 2.23e-35 135
Msa1179480 AT4G00820.1 38.220 191 98 4 89 265 130 314 4.57e-29 119
Msa1179480 AT3G52290.1 37.766 188 106 5 74 260 95 272 3.13e-27 113
Msa1179480 AT5G03040.1 37.306 193 114 4 71 260 93 281 3.43e-27 113
Msa1179480 AT5G03040.3 37.306 193 114 4 71 260 93 281 3.43e-27 113
Msa1179480 AT5G03040.2 37.306 193 114 4 71 260 93 281 3.43e-27 113
Msa1179480 AT1G01110.2 33.838 198 108 3 89 269 119 310 7.47e-26 110
Msa1179480 AT3G49260.1 31.046 306 167 11 93 382 122 399 9.58e-26 109
Msa1179480 AT3G49260.4 31.046 306 167 11 93 382 122 399 9.58e-26 109
Msa1179480 AT3G49260.2 31.046 306 167 11 93 382 122 399 9.58e-26 109
Msa1179480 AT3G49260.3 31.046 306 168 10 93 382 122 400 1.95e-25 108
Msa1179480 AT3G09710.1 35.260 173 107 3 89 260 106 274 1.25e-22 100
Msa1179480 AT3G09710.2 33.333 186 107 4 89 260 106 288 4.35e-21 95.9
Msa1179480 AT4G10640.1 31.481 216 107 5 88 274 97 300 5.79e-20 92.0
Msa1179480 AT2G26410.2 31.667 180 116 4 89 265 146 321 7.30e-20 92.4
Msa1179480 AT2G26410.1 31.667 180 116 4 89 265 146 321 7.30e-20 92.4
Msa1179480 AT2G33990.1 31.606 193 122 3 90 282 46 228 4.72e-19 87.0
Msa1179480 AT4G14750.1 32.222 180 86 4 1 155 1 169 1.44e-18 87.4
Msa1179480 AT4G14750.2 32.222 180 86 4 1 155 60 228 1.67e-18 87.8
Msa1179480 AT4G14750.3 32.222 180 86 4 1 155 60 228 1.74e-18 87.8
Msa1179480 AT3G59690.2 36.765 136 72 3 86 217 165 290 3.67e-18 87.0
Msa1179480 AT3G59690.1 36.765 136 72 3 86 217 165 290 3.67e-18 87.0
Msa1179480 AT3G15050.1 29.231 195 117 5 91 278 50 230 1.23e-17 82.8
Msa1179480 AT1G51960.1 49.367 79 39 1 84 161 92 170 1.89e-17 84.0
Msa1179480 AT4G23060.1 59.420 69 28 0 91 159 167 235 2.40e-17 84.7
Msa1179480 AT3G16490.1 55.385 65 29 0 90 154 106 170 4.91e-17 82.8
Msa1179480 AT5G07240.1 65.079 63 21 1 90 151 104 166 5.27e-17 82.8
Msa1179480 AT5G07240.2 65.079 63 21 1 90 151 150 212 6.17e-17 83.2
Msa1179480 AT5G13460.1 36.567 134 79 3 85 214 104 235 7.33e-17 82.8
Msa1179480 AT3G51380.1 53.030 66 31 0 89 154 35 100 2.84e-16 74.7
Msa1179480 AT2G43680.4 36.842 133 70 3 90 217 321 444 2.87e-16 81.6
Msa1179480 AT2G43680.2 36.842 133 70 3 90 217 321 444 2.87e-16 81.6
Msa1179480 AT2G43680.3 36.842 133 70 3 90 217 321 444 2.87e-16 81.6
Msa1179480 AT2G43680.5 36.842 133 70 3 90 217 321 444 2.87e-16 81.6
Msa1179480 AT2G43680.1 36.842 133 70 3 90 217 322 445 3.23e-16 81.6
Msa1179480 AT1G18840.1 45.714 70 38 0 88 157 106 175 3.44e-16 81.3
Msa1179480 AT1G18840.3 45.714 70 38 0 88 157 106 175 3.44e-16 81.3
Msa1179480 AT1G18840.2 45.714 70 38 0 88 157 106 175 3.44e-16 81.3
Msa1179480 AT4G29150.1 42.727 110 55 2 89 190 129 238 3.57e-16 80.5
Msa1179480 AT5G03960.3 41.353 133 65 3 93 217 110 237 5.06e-16 80.1
Msa1179480 AT5G03960.2 41.353 133 65 3 93 217 110 237 5.06e-16 80.1
Msa1179480 AT5G03960.1 41.353 133 65 3 93 217 109 236 5.61e-16 79.7
Msa1179480 AT5G62070.1 69.811 53 16 0 93 145 119 171 2.28e-15 78.2
Msa1179480 AT1G74690.1 47.143 70 37 0 88 157 110 179 5.28e-14 74.3
Msa1179480 AT1G14380.1 40.541 74 44 0 84 157 87 160 5.88e-13 71.2
Msa1179480 AT1G14380.3 40.541 74 44 0 84 157 87 160 5.88e-13 71.2
Msa1179480 AT1G14380.4 40.541 74 44 0 84 157 87 160 5.88e-13 71.2
Msa1179480 AT1G14380.6 40.541 74 44 0 84 157 87 160 6.17e-13 71.2
Msa1179480 AT1G14380.5 40.541 74 44 0 84 157 87 160 6.17e-13 71.2
Msa1179480 AT1G14380.2 40.541 74 44 0 84 157 87 160 6.17e-13 71.2
Msa1179480 AT1G14380.7 40.541 74 44 0 84 157 87 160 7.49e-13 70.9
Msa1179480 AT3G49380.1 52.459 61 29 0 86 146 105 165 2.87e-12 68.2
Msa1179480 AT1G19870.1 49.153 59 30 0 95 153 219 277 7.90e-12 67.8
Msa1179480 AT1G19870.2 49.153 59 30 0 95 153 36 94 8.30e-12 67.8

Find 107 sgRNAs with CRISPR-Local

Find 183 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATTTGAAGAGACTCTTTA+TGG 0.133585 8_1:+12901521 Msa1179480:CDS
ATCTTTATGCAACTCCTTTA+AGG 0.134915 8_1:+12901640 Msa1179480:CDS
GATACCTCAGCTTGTTTAAT+AGG 0.169093 8_1:-12900379 None:intergenic
GCAGATACTAGAAGCATTTC+TGG 0.170763 8_1:+12901588 Msa1179480:CDS
TGGCTACTCTATTCATTAAT+AGG 0.208810 8_1:+12902063 Msa1179480:three_prime_UTR
TGTAGGCAAGAAGAGCTTTA+AGG 0.213336 8_1:+12900164 Msa1179480:intron
CATAAAGAGTCTCTTCAAAT+TGG 0.218799 8_1:-12901520 None:intergenic
TCATCAGAAGTTATTGGATT+TGG 0.241573 8_1:+12899610 Msa1179480:CDS
GTAATAGATACAAACAATTT+AGG 0.241825 8_1:-12901805 None:intergenic
GTAAGAGAAAATGGAAATTA+TGG 0.244600 8_1:+12899581 Msa1179480:CDS
AACTCCACACAAAGATTTCT+TGG 0.248107 8_1:+12899738 Msa1179480:CDS
CCTATTCTTCGGCTAATATA+TGG 0.248919 8_1:+12901613 Msa1179480:CDS
TATGTTGATGTTCATTCTTT+TGG 0.255920 8_1:+12902043 Msa1179480:three_prime_UTR
CTCAATTACCAGGGTGGAAT+TGG 0.278982 8_1:-12900601 None:intergenic
TTGATAAGAGTAAGAGAAAA+TGG 0.285732 8_1:+12899572 Msa1179480:CDS
AGAAATTCATCAGAAGTTAT+TGG 0.289830 8_1:+12899604 Msa1179480:CDS
CGAACTTGATTATTCGTAGA+TGG 0.297558 8_1:-12899156 None:intergenic
GCCATGGGAGAGCAGGTTAA+TGG 0.304447 8_1:+12901152 Msa1179480:CDS
GTTAATGGGAGACATCTATT+TGG 0.309471 8_1:+12901167 Msa1179480:CDS
TTCAACATTCTCATTCTTCC+TGG 0.326983 8_1:-12901214 None:intergenic
AGGGACTAGTAGTTATAAAT+TGG 0.334587 8_1:-12902002 None:intergenic
ATGAAGAAGGGGCACAGTTT+TGG 0.336135 8_1:+12899640 Msa1179480:CDS
TTAACTTCTTCCACAGTTCC+TGG 0.339398 8_1:-12900519 None:intergenic
CATTTCTGGTTCCTATTCTT+CGG 0.345550 8_1:+12901602 Msa1179480:CDS
GATGCAAAGAAAAGGGAAAC+TGG 0.374499 8_1:+12901429 Msa1179480:CDS
AACAAGCAGCTGTTACTCTA+AGG 0.378838 8_1:+12900242 Msa1179480:CDS
GTAGGCAAGAAGAGCTTTAA+GGG 0.390517 8_1:+12900165 Msa1179480:intron
AAGAGCTTTAAGGGCTTTGA+GGG 0.409104 8_1:+12900174 Msa1179480:CDS
GAAGAGCTTTAAGGGCTTTG+AGG 0.415886 8_1:+12900173 Msa1179480:CDS
GATGTGGATGAAATTGATAA+AGG 0.428311 8_1:-12901384 None:intergenic
ATCATTTGCAAACTTGTTGA+GGG 0.431651 8_1:+12901921 Msa1179480:three_prime_UTR
ACACGCTTTCAGCTTAGCTT+TGG 0.433439 8_1:-12901484 None:intergenic
AGATTTCTTGGTGATCAAAC+AGG 0.433822 8_1:+12899750 Msa1179480:CDS
AAATGGGTGGTTCAGGAAGC+TGG 0.434106 8_1:+12899112 Msa1179480:exon
ATAAAGAGTCTCTTCAAATT+GGG 0.441369 8_1:-12901519 None:intergenic
CAACAAGATGTTGGACTCAT+TGG 0.441746 8_1:-12901711 None:intergenic
CCATGGGAGAGCAGGTTAAT+GGG 0.442333 8_1:+12901153 Msa1179480:CDS
CATCATTTGCAAACTTGTTG+AGG 0.443452 8_1:+12901920 Msa1179480:three_prime_UTR
CCATATATTAGCCGAAGAAT+AGG 0.446522 8_1:-12901613 None:intergenic
CTGAAGACGACGGAGTTGAT+TGG 0.447876 8_1:-12901329 None:intergenic
GGCTTAGAACCTCTTGAGCT+TGG 0.458398 8_1:-12901063 None:intergenic
ATTTGGAACTTCTATGAAGA+AGG 0.464371 8_1:+12899627 Msa1179480:CDS
GCCTCAAGGCAAAGAATGTC+CGG 0.467814 8_1:+12900296 Msa1179480:CDS
TTTGCATCTTCCACCCTGGT+TGG 0.472014 8_1:-12901414 None:intergenic
TATCAAAATCGATTTACAAT+GGG 0.473427 8_1:+12901669 Msa1179480:CDS
TGCTGCTGCAATGGCTGCTG+TGG 0.474008 8_1:+12899711 Msa1179480:CDS
TTTAAGGGCTTTGAGGGCAT+TGG 0.477642 8_1:+12900180 Msa1179480:CDS
GGGTGGAAGATGCAAAGAAA+AGG 0.482272 8_1:+12901421 Msa1179480:CDS
ATGTGGATGAAATTGATAAA+GGG 0.482929 8_1:-12901383 None:intergenic
CCCATTAACCTGCTCTCCCA+TGG 0.488427 8_1:-12901153 None:intergenic
CAAGGGTGGTGTGACTTACC+AGG 0.491604 8_1:+12900501 Msa1179480:CDS
CAGCTAAGCCATGGGAGAGC+AGG 0.493641 8_1:+12901145 Msa1179480:CDS
CTCGAAAAGCAGACTGGATG+CGG 0.495137 8_1:-12899786 None:intergenic
TCCAGAAAAGAAAGCTAAGA+AGG 0.502122 8_1:+12900324 Msa1179480:CDS
TGCAAGCAATATTTCGCGGC+CGG 0.508698 8_1:+12900209 Msa1179480:CDS
TAGCAAACGTTGAATTTGTA+CGG 0.511056 8_1:+12901969 Msa1179480:three_prime_UTR
TGTTGATTGAGAGGAGTCAA+TGG 0.511060 8_1:-12901084 None:intergenic
CTCAATCAACACAGCTTAGA+CGG 0.511931 8_1:+12901096 Msa1179480:CDS
TTTCTTTGCATCTTCCACCC+TGG 0.515439 8_1:-12901418 None:intergenic
AGAAGCCTCGAAAAGCAGAC+TGG 0.516329 8_1:-12899792 None:intergenic
CTGGACGATGGAGTCATGCC+AGG 0.522345 8_1:-12901195 None:intergenic
TTGAGGGTCTGAGGTTAAGC+GGG 0.530931 8_1:+12901937 Msa1179480:three_prime_UTR
TTCTCATTCTTCCTGGACGA+TGG 0.534473 8_1:-12901207 None:intergenic
GGGCTTTGAGGGCATTGGTG+AGG 0.534691 8_1:+12900185 Msa1179480:CDS
GTTAGATTCAAGTTCAACGT+TGG 0.541857 8_1:+12901874 Msa1179480:three_prime_UTR
GACAATGGACAACAAGATGT+TGG 0.543413 8_1:-12901720 None:intergenic
TTTGGAACTTCTATGAAGAA+GGG 0.543844 8_1:+12899628 Msa1179480:CDS
TGTTACTCTAAGGTGCATGC+AGG 0.547486 8_1:+12900252 Msa1179480:CDS
GTGTTGTTGATATAAGTTGA+AGG 0.552236 8_1:-12901241 None:intergenic
GCTGGATTGCAGCTAAGCCA+TGG 0.553274 8_1:+12901136 Msa1179480:CDS
GCAAACTTGTTGAGGGTCTG+AGG 0.557721 8_1:+12901928 Msa1179480:three_prime_UTR
GGTGGAAGATGCAAAGAAAA+GGG 0.560328 8_1:+12901422 Msa1179480:CDS
TCCGGACATTCTTTGCCTTG+AGG 0.562579 8_1:-12900297 None:intergenic
CTGGCATGACTCCATCGTCC+AGG 0.565898 8_1:+12901196 Msa1179480:CDS
TTATCAAAATCGATTTACAA+TGG 0.568908 8_1:+12901668 Msa1179480:CDS
TCTTGGTGATCAAACAGGAA+TGG 0.570155 8_1:+12899755 Msa1179480:CDS
TTTGTTATTGTCAGCAAGGG+TGG 0.574781 8_1:+12900487 Msa1179480:intron
AGTATGTGTTATGAGTTTGA+AGG 0.577937 8_1:-12899032 None:intergenic
ATGCAAAGAAAAGGGAAACT+GGG 0.578064 8_1:+12901430 Msa1179480:CDS
CCACATCTGAATCACCAACC+AGG 0.582285 8_1:+12901400 Msa1179480:CDS
CTGGATTGCAGCTAAGCCAT+GGG 0.595347 8_1:+12901137 Msa1179480:CDS
AGGCTGCAAGCAATATTTCG+CGG 0.595467 8_1:+12900205 Msa1179480:CDS
GATGTTGGACTCATTGGTCA+TGG 0.597672 8_1:-12901705 None:intergenic
ATCACCAAGAAATCTTTGTG+TGG 0.601524 8_1:-12899742 None:intergenic
TCTTCTGACTAAAGTGACAA+TGG 0.604160 8_1:-12901735 None:intergenic
AGTTCTAGTCCAAGCTCAAG+AGG 0.604619 8_1:+12901054 Msa1179480:CDS
GTTGAGGGTCTGAGGTTAAG+CGG 0.606315 8_1:+12901936 Msa1179480:three_prime_UTR
TCTAAGCTGTGTTGATTGAG+AGG 0.608188 8_1:-12901093 None:intergenic
TTGGAACTTCTATGAAGAAG+GGG 0.609508 8_1:+12899629 Msa1179480:CDS
TGATCCTATTAAACAAGCTG+AGG 0.609591 8_1:+12900375 Msa1179480:CDS
GCTGTCAAATTAGTGTAGGT+CGG 0.609596 8_1:-12901456 None:intergenic
AAAAGCAGACTGGATGCGGA+TGG 0.611702 8_1:-12899782 None:intergenic
TTCTTCGGCTAATATATGGA+AGG 0.613165 8_1:+12901617 Msa1179480:CDS
TGCAGTGCTGCAGAGTGCAA+AGG 0.613227 8_1:-12901828 None:intergenic
TGACGCTGTCAAATTAGTGT+AGG 0.615797 8_1:-12901460 None:intergenic
GACATCTATTTGGACTCACC+TGG 0.618384 8_1:+12901177 Msa1179480:CDS
GTAAGAGCATGTTAGAACGC+TGG 0.621069 8_1:+12901118 Msa1179480:CDS
CCTGGTTGGTGATTCAGATG+TGG 0.623733 8_1:-12901400 None:intergenic
GCAGTGCTGCAGAGTGCAAA+GGG 0.625203 8_1:-12901827 None:intergenic
GCGAGTTCAAGAACGCCTCA+AGG 0.630291 8_1:+12900282 Msa1179480:CDS
CACATCTGAATCACCAACCA+GGG 0.647100 8_1:+12901401 Msa1179480:CDS
GTCATACACCAATTCCACCC+TGG 0.671736 8_1:+12900593 Msa1179480:CDS
GAGCTTATAGCTGAAGACGA+CGG 0.681122 8_1:-12901339 None:intergenic
ATCTGAATCACCAACCAGGG+TGG 0.681122 8_1:+12901404 Msa1179480:CDS
TCTTAACTCAATTACCAGGG+TGG 0.682160 8_1:-12900607 None:intergenic
GTGTGACTTACCAGGAACTG+TGG 0.695767 8_1:+12900509 Msa1179480:CDS
TTCAACTTATATCAACAACA+CGG 0.715490 8_1:+12901243 Msa1179480:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATTTAATCATTTTTTAC+TGG - chr8_1:12899376-12899395 None:intergenic 10.0%
!!! AATTATTTCATTTTGTTATT+AGG + chr8_1:12899867-12899886 Msa1179480:intron 10.0%
!!! TACTGGTTTTAAATTATTAT+CGG - chr8_1:12899359-12899378 None:intergenic 15.0%
!! AATATAATTACATGTGTATA+CGG + chr8_1:12899390-12899409 Msa1179480:intron 15.0%
!! ATTATACATTTAAGTATCTA+AGG - chr8_1:12900076-12900095 None:intergenic 15.0%
!!! GAAGTTAGAATTTTAAAATT+TGG + chr8_1:12900788-12900807 Msa1179480:intron 15.0%
!! AATGTAAAGTAATTTATGTT+TGG - chr8_1:12900873-12900892 None:intergenic 15.0%
!!! TTATTAAAGCACATATATTT+TGG - chr8_1:12901005-12901024 None:intergenic 15.0%
!! AACATACTAAAAAAATACAA+TGG - chr8_1:12902029-12902048 None:intergenic 15.0%
!!! GATGTGTATTTATTATGTTT+TGG + chr8_1:12899522-12899541 Msa1179480:intron 20.0%
!!! AATTAATGATTTGTTTCTTG+AGG - chr8_1:12900050-12900069 None:intergenic 20.0%
!! CAAGAAACAAATCATTAATT+AGG + chr8_1:12900050-12900069 Msa1179480:intron 20.0%
!! GATACTTAAATGTATAATTC+AGG + chr8_1:12900078-12900097 Msa1179480:intron 20.0%
!! TTAAAGCAAAACTAAAAATG+AGG + chr8_1:12900538-12900557 Msa1179480:CDS 20.0%
!! TTAGTAAAAGCAAGAAAAAA+TGG + chr8_1:12901267-12901286 Msa1179480:CDS 20.0%
!!! TTATCAAAATCGATTTACAA+TGG + chr8_1:12901668-12901687 Msa1179480:CDS 20.0%
!!! TATCAAAATCGATTTACAAT+GGG + chr8_1:12901669-12901688 Msa1179480:CDS 20.0%
!! GTAATAGATACAAACAATTT+AGG - chr8_1:12901808-12901827 None:intergenic 20.0%
!! ACTAAAAAAATACAATGGAA+GGG - chr8_1:12902024-12902043 None:intergenic 20.0%
!! TACTAAAAAAATACAATGGA+AGG - chr8_1:12902025-12902044 None:intergenic 20.0%
!!! AAGAGCTTATTTTAGAAGAA+TGG - chr8_1:12899087-12899106 None:intergenic 25.0%
!! AAATAAGCTCTTTTCTCAAA+TGG + chr8_1:12899095-12899114 Msa1179480:exon 25.0%
!! AATAAGCTCTTTTCTCAAAT+GGG + chr8_1:12899096-12899115 Msa1179480:exon 25.0%
! AAAGACATATTTGGTATGTT+CGG - chr8_1:12899458-12899477 None:intergenic 25.0%
!! ATGTTACATAGGTGTATTTT+TGG + chr8_1:12899492-12899511 Msa1179480:intron 25.0%
! TTGATAAGAGTAAGAGAAAA+TGG + chr8_1:12899572-12899591 Msa1179480:CDS 25.0%
! GTAAGAGAAAATGGAAATTA+TGG + chr8_1:12899581-12899600 Msa1179480:CDS 25.0%
! AGAAATTCATCAGAAGTTAT+TGG + chr8_1:12899604-12899623 Msa1179480:CDS 25.0%
!! CTTTAACTTTAGTACATGTT+TGG + chr8_1:12899900-12899919 Msa1179480:intron 25.0%
!! AAGTTCATACTTTGATTTAG+AGG - chr8_1:12900110-12900129 None:intergenic 25.0%
! AAATCTTAACTCAATTACCA+GGG - chr8_1:12900613-12900632 None:intergenic 25.0%
! TTACTGTGTAAATATGGTTT+CGG + chr8_1:12900662-12900681 Msa1179480:intron 25.0%
!!! TTTGATTGTTTTGAATGAAC+TGG - chr8_1:12900929-12900948 None:intergenic 25.0%
! TTCAACTTATATCAACAACA+CGG + chr8_1:12901243-12901262 Msa1179480:CDS 25.0%
! AAAAAATGGTGTAACAACTA+GGG + chr8_1:12901281-12901300 Msa1179480:CDS 25.0%
! ATGTGGATGAAATTGATAAA+GGG - chr8_1:12901386-12901405 None:intergenic 25.0%
! ATAAAGAGTCTCTTCAAATT+GGG - chr8_1:12901522-12901541 None:intergenic 25.0%
!!! TTTTGATAACTTGTCCTTAA+AGG - chr8_1:12901657-12901676 None:intergenic 25.0%
!! TATGTTGATGTTCATTCTTT+TGG + chr8_1:12902043-12902062 Msa1179480:three_prime_UTR 25.0%
AGTATGTGTTATGAGTTTGA+AGG - chr8_1:12899035-12899054 None:intergenic 30.0%
CTTCAGATCAAAGACATATT+TGG - chr8_1:12899467-12899486 None:intergenic 30.0%
!!! CATAGGTGTATTTTTGGTTT+TGG + chr8_1:12899498-12899517 Msa1179480:intron 30.0%
TCATCAGAAGTTATTGGATT+TGG + chr8_1:12899610-12899629 Msa1179480:CDS 30.0%
! ATTTGGAACTTCTATGAAGA+AGG + chr8_1:12899627-12899646 Msa1179480:CDS 30.0%
! TTTGGAACTTCTATGAAGAA+GGG + chr8_1:12899628-12899647 Msa1179480:CDS 30.0%
CAGAATCATGATTATGCAAA+AGG - chr8_1:12899831-12899850 None:intergenic 30.0%
TTAGTACATGTTTGGATTTG+AGG + chr8_1:12899908-12899927 Msa1179480:intron 30.0%
!!! GCTTTTGCTATTTATGTTGT+AGG + chr8_1:12900147-12900166 Msa1179480:intron 30.0%
AAACTAAAAATGAGGCAAGA+AGG + chr8_1:12900546-12900565 Msa1179480:CDS 30.0%
CAAATCTTAACTCAATTACC+AGG - chr8_1:12900614-12900633 None:intergenic 30.0%
TGAGTCTTACTGTGTAAATA+TGG + chr8_1:12900656-12900675 Msa1179480:intron 30.0%
! TGTAAATATGGTTTCGGTTT+TGG + chr8_1:12900668-12900687 Msa1179480:intron 30.0%
!! CAAGTTAGAATCACTTTTAG+AGG - chr8_1:12900769-12900788 None:intergenic 30.0%
! GTGTTGTTGATATAAGTTGA+AGG - chr8_1:12901244-12901263 None:intergenic 30.0%
GAAAAAATGGTGTAACAACT+AGG + chr8_1:12901280-12901299 Msa1179480:CDS 30.0%
GATGTGGATGAAATTGATAA+AGG - chr8_1:12901387-12901406 None:intergenic 30.0%
CATAAAGAGTCTCTTCAAAT+TGG - chr8_1:12901523-12901542 None:intergenic 30.0%
CAATTTGAAGAGACTCTTTA+TGG + chr8_1:12901521-12901540 Msa1179480:CDS 30.0%
ATCTTTATGCAACTCCTTTA+AGG + chr8_1:12901640-12901659 Msa1179480:CDS 30.0%
!! ATCATTTGCAAACTTGTTGA+GGG + chr8_1:12901921-12901940 Msa1179480:three_prime_UTR 30.0%
TAGCAAACGTTGAATTTGTA+CGG + chr8_1:12901969-12901988 Msa1179480:three_prime_UTR 30.0%
! AGGGACTAGTAGTTATAAAT+TGG - chr8_1:12902005-12902024 None:intergenic 30.0%
TGGCTACTCTATTCATTAAT+AGG + chr8_1:12902063-12902082 Msa1179480:three_prime_UTR 30.0%
CGAACTTGATTATTCGTAGA+TGG - chr8_1:12899159-12899178 None:intergenic 35.0%
!! GCGGTTTTATATATGAAGCA+TGG + chr8_1:12899319-12899338 Msa1179480:intron 35.0%
CTGAAGCAACAATGTTACAT+AGG + chr8_1:12899481-12899500 Msa1179480:intron 35.0%
!!! TTTGGTCCTGAACTTTTTTC+AGG + chr8_1:12899540-12899559 Msa1179480:intron 35.0%
!!! CTGAACTTTTTTCAGGAGAA+GGG + chr8_1:12899547-12899566 Msa1179480:intron 35.0%
TTGGAACTTCTATGAAGAAG+GGG + chr8_1:12899629-12899648 Msa1179480:CDS 35.0%
AACTCCACACAAAGATTTCT+TGG + chr8_1:12899738-12899757 Msa1179480:CDS 35.0%
ATCACCAAGAAATCTTTGTG+TGG - chr8_1:12899745-12899764 None:intergenic 35.0%
! AGATTTCTTGGTGATCAAAC+AGG + chr8_1:12899750-12899769 Msa1179480:CDS 35.0%
! TTTGGATTTGAGGTGAGTTT+GGG + chr8_1:12899918-12899937 Msa1179480:intron 35.0%
!! CTTTCTTTTCTGGAGAATTC+CGG - chr8_1:12900318-12900337 None:intergenic 35.0%
TCCAGAAAAGAAAGCTAAGA+AGG + chr8_1:12900324-12900343 Msa1179480:CDS 35.0%
!! TCCTTCTTAGCTTTCTTTTC+TGG - chr8_1:12900328-12900347 None:intergenic 35.0%
TGATCCTATTAAACAAGCTG+AGG + chr8_1:12900375-12900394 Msa1179480:CDS 35.0%
! GATACCTCAGCTTGTTTAAT+AGG - chr8_1:12900382-12900401 None:intergenic 35.0%
!! TTGCTTTGTTATTGTCAGCA+AGG + chr8_1:12900483-12900502 Msa1179480:intron 35.0%
!! TGCTTTGTTATTGTCAGCAA+GGG + chr8_1:12900484-12900503 Msa1179480:intron 35.0%
!! AAATATGGTTTCGGTTTTGG+AGG + chr8_1:12900671-12900690 Msa1179480:intron 35.0%
!! GGAGGCACAATTAATTTTAG+AGG + chr8_1:12900692-12900711 Msa1179480:intron 35.0%
! CAATCAAATTTTGCCACTAC+TGG + chr8_1:12900941-12900960 Msa1179480:intron 35.0%
GTTAATGGGAGACATCTATT+TGG + chr8_1:12901167-12901186 Msa1179480:CDS 35.0%
TTCAACATTCTCATTCTTCC+TGG - chr8_1:12901217-12901236 None:intergenic 35.0%
ATGCAAAGAAAAGGGAAACT+GGG + chr8_1:12901430-12901449 Msa1179480:CDS 35.0%
!! CATTTCTGGTTCCTATTCTT+CGG + chr8_1:12901602-12901621 Msa1179480:CDS 35.0%
CCATATATTAGCCGAAGAAT+AGG - chr8_1:12901616-12901635 None:intergenic 35.0%
CCTATTCTTCGGCTAATATA+TGG + chr8_1:12901613-12901632 Msa1179480:CDS 35.0%
TTCTTCGGCTAATATATGGA+AGG + chr8_1:12901617-12901636 Msa1179480:CDS 35.0%
TCTTCTGACTAAAGTGACAA+TGG - chr8_1:12901738-12901757 None:intergenic 35.0%
! GTTAGATTCAAGTTCAACGT+TGG + chr8_1:12901874-12901893 Msa1179480:three_prime_UTR 35.0%
!! CATCATTTGCAAACTTGTTG+AGG + chr8_1:12901920-12901939 Msa1179480:three_prime_UTR 35.0%
! AAGCTCTTTTCTCAAATGGG+TGG + chr8_1:12899099-12899118 Msa1179480:exon 40.0%
! TTTTCTCAAATGGGTGGTTC+AGG + chr8_1:12899105-12899124 Msa1179480:exon 40.0%
GATGTGTAATTGTCGTGTGT+CGG - chr8_1:12899241-12899260 None:intergenic 40.0%
! AATTATTATCGGTGTCCACG+TGG - chr8_1:12899348-12899367 None:intergenic 40.0%
CCTTCTCCTGAAAAAAGTTC+AGG - chr8_1:12899549-12899568 None:intergenic 40.0%
!!! CCTGAACTTTTTTCAGGAGA+AGG + chr8_1:12899546-12899565 Msa1179480:intron 40.0%
! TCTTGGTGATCAAACAGGAA+TGG + chr8_1:12899755-12899774 Msa1179480:CDS 40.0%
! GTTTGGATTTGAGGTGAGTT+TGG + chr8_1:12899917-12899936 Msa1179480:intron 40.0%
TGTAGGCAAGAAGAGCTTTA+AGG + chr8_1:12900164-12900183 Msa1179480:intron 40.0%
! GTAGGCAAGAAGAGCTTTAA+GGG + chr8_1:12900165-12900184 Msa1179480:intron 40.0%
!! AAGAGCTTTAAGGGCTTTGA+GGG + chr8_1:12900174-12900193 Msa1179480:CDS 40.0%
!! CTGCTTGTTTTCTCACTAAC+CGG - chr8_1:12900231-12900250 None:intergenic 40.0%
AACAAGCAGCTGTTACTCTA+AGG + chr8_1:12900242-12900261 Msa1179480:CDS 40.0%
!! TTTGTTATTGTCAGCAAGGG+TGG + chr8_1:12900487-12900506 Msa1179480:intron 40.0%
TTAACTTCTTCCACAGTTCC+TGG - chr8_1:12900522-12900541 None:intergenic 40.0%
TCTTAACTCAATTACCAGGG+TGG - chr8_1:12900610-12900629 None:intergenic 40.0%
TGGTCTCTACAACAGATTGT+TGG + chr8_1:12900808-12900827 Msa1179480:intron 40.0%
! TGTTGATTGAGAGGAGTCAA+TGG - chr8_1:12901087-12901106 None:intergenic 40.0%
!! TCTAAGCTGTGTTGATTGAG+AGG - chr8_1:12901096-12901115 None:intergenic 40.0%
CTCAATCAACACAGCTTAGA+CGG + chr8_1:12901096-12901115 Msa1179480:CDS 40.0%
GGTGGAAGATGCAAAGAAAA+GGG + chr8_1:12901422-12901441 Msa1179480:CDS 40.0%
GATGCAAAGAAAAGGGAAAC+TGG + chr8_1:12901429-12901448 Msa1179480:CDS 40.0%
GCTGTCAAATTAGTGTAGGT+CGG - chr8_1:12901459-12901478 None:intergenic 40.0%
TGACGCTGTCAAATTAGTGT+AGG - chr8_1:12901463-12901482 None:intergenic 40.0%
!! GCAGATACTAGAAGCATTTC+TGG + chr8_1:12901588-12901607 Msa1179480:CDS 40.0%
CAACAAGATGTTGGACTCAT+TGG - chr8_1:12901714-12901733 None:intergenic 40.0%
GACAATGGACAACAAGATGT+TGG - chr8_1:12901723-12901742 None:intergenic 40.0%
TATGAAGCATGGATACCACG+TGG + chr8_1:12899330-12899349 Msa1179480:intron 45.0%
!! TATACGGTGTTGTGCTGTGT+TGG + chr8_1:12899406-12899425 Msa1179480:intron 45.0%
! GTGTTGTGCTGTGTTGGTAT+CGG + chr8_1:12899412-12899431 Msa1179480:intron 45.0%
!! ATGAAGAAGGGGCACAGTTT+TGG + chr8_1:12899640-12899659 Msa1179480:CDS 45.0%
! AGAAGCTTTTGCTGCTGCAA+TGG + chr8_1:12899702-12899721 Msa1179480:CDS 45.0%
!! GAAGAGCTTTAAGGGCTTTG+AGG + chr8_1:12900173-12900192 Msa1179480:CDS 45.0%
!! TTTAAGGGCTTTGAGGGCAT+TGG + chr8_1:12900180-12900199 Msa1179480:CDS 45.0%
AGGCTGCAAGCAATATTTCG+CGG + chr8_1:12900205-12900224 Msa1179480:CDS 45.0%
!! TGTTACTCTAAGGTGCATGC+AGG + chr8_1:12900252-12900271 Msa1179480:CDS 45.0%
CTCAATTACCAGGGTGGAAT+TGG - chr8_1:12900604-12900623 None:intergenic 45.0%
!!! TATGGTTTCGGTTTTGGAGG+AGG + chr8_1:12900674-12900693 Msa1179480:intron 45.0%
GTGCATATCTGATCCAGTAG+TGG - chr8_1:12900957-12900976 None:intergenic 45.0%
! AGTTCTAGTCCAAGCTCAAG+AGG + chr8_1:12901054-12901073 Msa1179480:CDS 45.0%
! GTAAGAGCATGTTAGAACGC+TGG + chr8_1:12901118-12901137 Msa1179480:CDS 45.0%
GACATCTATTTGGACTCACC+TGG + chr8_1:12901177-12901196 Msa1179480:CDS 45.0%
TTCTCATTCTTCCTGGACGA+TGG - chr8_1:12901210-12901229 None:intergenic 45.0%
GAGCTTATAGCTGAAGACGA+CGG - chr8_1:12901342-12901361 None:intergenic 45.0%
CACATCTGAATCACCAACCA+GGG + chr8_1:12901401-12901420 Msa1179480:CDS 45.0%
TTTCTTTGCATCTTCCACCC+TGG - chr8_1:12901421-12901440 None:intergenic 45.0%
GGGTGGAAGATGCAAAGAAA+AGG + chr8_1:12901421-12901440 Msa1179480:CDS 45.0%
ACACGCTTTCAGCTTAGCTT+TGG - chr8_1:12901487-12901506 None:intergenic 45.0%
GATGTTGGACTCATTGGTCA+TGG - chr8_1:12901708-12901727 None:intergenic 45.0%
AAATGGGTGGTTCAGGAAGC+TGG + chr8_1:12899112-12899131 Msa1179480:exon 50.0%
GAGACCAGACATACATGTCG+GGG - chr8_1:12899219-12899238 None:intergenic 50.0%
GGAGACCAGACATACATGTC+GGG - chr8_1:12899220-12899239 None:intergenic 50.0%
CGGAGACCAGACATACATGT+CGG - chr8_1:12899221-12899240 None:intergenic 50.0%
TAGTGTCCACGTGTCATGTC+AGG + chr8_1:12899292-12899311 Msa1179480:intron 50.0%
AAAAGCAGACTGGATGCGGA+TGG - chr8_1:12899785-12899804 None:intergenic 50.0%
CTCGAAAAGCAGACTGGATG+CGG - chr8_1:12899789-12899808 None:intergenic 50.0%
AGAAGCCTCGAAAAGCAGAC+TGG - chr8_1:12899795-12899814 None:intergenic 50.0%
!! GTCTGCTTTTCGAGGCTTCT+TGG + chr8_1:12899795-12899814 Msa1179480:CDS 50.0%
TGCAAGCAATATTTCGCGGC+CGG + chr8_1:12900209-12900228 Msa1179480:CDS 50.0%
GCCTCAAGGCAAAGAATGTC+CGG + chr8_1:12900296-12900315 Msa1179480:CDS 50.0%
TCCGGACATTCTTTGCCTTG+AGG - chr8_1:12900300-12900319 None:intergenic 50.0%
GTGTGACTTACCAGGAACTG+TGG + chr8_1:12900509-12900528 Msa1179480:CDS 50.0%
GTCATACACCAATTCCACCC+TGG + chr8_1:12900593-12900612 Msa1179480:CDS 50.0%
GGCTTAGAACCTCTTGAGCT+TGG - chr8_1:12901066-12901085 None:intergenic 50.0%
CTGGATTGCAGCTAAGCCAT+GGG + chr8_1:12901137-12901156 Msa1179480:CDS 50.0%
CCATGGGAGAGCAGGTTAAT+GGG + chr8_1:12901153-12901172 Msa1179480:CDS 50.0%
! CTGAAGACGACGGAGTTGAT+TGG - chr8_1:12901332-12901351 None:intergenic 50.0%
!! CCTGGTTGGTGATTCAGATG+TGG - chr8_1:12901403-12901422 None:intergenic 50.0%
CCACATCTGAATCACCAACC+AGG + chr8_1:12901400-12901419 Msa1179480:CDS 50.0%
ATCTGAATCACCAACCAGGG+TGG + chr8_1:12901404-12901423 Msa1179480:CDS 50.0%
TTTGCATCTTCCACCCTGGT+TGG - chr8_1:12901417-12901436 None:intergenic 50.0%
!! GCAAACTTGTTGAGGGTCTG+AGG + chr8_1:12901928-12901947 Msa1179480:three_prime_UTR 50.0%
! GTTGAGGGTCTGAGGTTAAG+CGG + chr8_1:12901936-12901955 Msa1179480:three_prime_UTR 50.0%
! TTGAGGGTCTGAGGTTAAGC+GGG + chr8_1:12901937-12901956 Msa1179480:three_prime_UTR 50.0%
! ACGTGTCATGTCAGGTGTCG+CGG + chr8_1:12899300-12899319 Msa1179480:intron 55.0%
!! CGCATCCAGTCTGCTTTTCG+AGG + chr8_1:12899787-12899806 Msa1179480:CDS 55.0%
GCGAGTTCAAGAACGCCTCA+AGG + chr8_1:12900282-12900301 Msa1179480:CDS 55.0%
CAAGGGTGGTGTGACTTACC+AGG + chr8_1:12900501-12900520 Msa1179480:CDS 55.0%
GCTGGATTGCAGCTAAGCCA+TGG + chr8_1:12901136-12901155 Msa1179480:CDS 55.0%
GCCATGGGAGAGCAGGTTAA+TGG + chr8_1:12901152-12901171 Msa1179480:CDS 55.0%
CCCATTAACCTGCTCTCCCA+TGG - chr8_1:12901156-12901175 None:intergenic 55.0%
GCAGTGCTGCAGAGTGCAAA+GGG - chr8_1:12901830-12901849 None:intergenic 55.0%
TGCAGTGCTGCAGAGTGCAA+AGG - chr8_1:12901831-12901850 None:intergenic 55.0%
AGCGCCCCGACATGTATGTC+TGG + chr8_1:12899212-12899231 Msa1179480:intron 60.0%
GCGACACCTGACATGACACG+TGG - chr8_1:12899301-12899320 None:intergenic 60.0%
TGCTGCTGCAATGGCTGCTG+TGG + chr8_1:12899711-12899730 Msa1179480:CDS 60.0%
!! GGGCTTTGAGGGCATTGGTG+AGG + chr8_1:12900185-12900204 Msa1179480:CDS 60.0%
CAGCTAAGCCATGGGAGAGC+AGG + chr8_1:12901145-12901164 Msa1179480:CDS 60.0%
CTGGACGATGGAGTCATGCC+AGG - chr8_1:12901198-12901217 None:intergenic 60.0%
CTGGCATGACTCCATCGTCC+AGG + chr8_1:12901196-12901215 Msa1179480:CDS 60.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 12898995 12902205 12898995 ID=Msa1179480;Name=Msa1179480
chr8_1 mRNA 12898995 12902205 12898995 ID=Msa1179480-mRNA-1;Parent=Msa1179480;Name=Msa1179480-mRNA-1;_AED=0.03;_eAED=0.03;_QI=119|1|1|1|1|1|5|504|438
chr8_1 exon 12898995 12899173 12898995 ID=Msa1179480-mRNA-1:exon:4633;Parent=Msa1179480-mRNA-1
chr8_1 exon 12899562 12899816 12899562 ID=Msa1179480-mRNA-1:exon:4634;Parent=Msa1179480-mRNA-1
chr8_1 exon 12900169 12900396 12900169 ID=Msa1179480-mRNA-1:exon:4635;Parent=Msa1179480-mRNA-1
chr8_1 exon 12900501 12900614 12900501 ID=Msa1179480-mRNA-1:exon:4636;Parent=Msa1179480-mRNA-1
chr8_1 exon 12901042 12902205 12901042 ID=Msa1179480-mRNA-1:exon:4637;Parent=Msa1179480-mRNA-1
chr8_1 five_prime_UTR 12898995 12899113 12898995 ID=Msa1179480-mRNA-1:five_prime_utr;Parent=Msa1179480-mRNA-1
chr8_1 CDS 12899114 12899173 12899114 ID=Msa1179480-mRNA-1:cds;Parent=Msa1179480-mRNA-1
chr8_1 CDS 12899562 12899816 12899562 ID=Msa1179480-mRNA-1:cds;Parent=Msa1179480-mRNA-1
chr8_1 CDS 12900169 12900396 12900169 ID=Msa1179480-mRNA-1:cds;Parent=Msa1179480-mRNA-1
chr8_1 CDS 12900501 12900614 12900501 ID=Msa1179480-mRNA-1:cds;Parent=Msa1179480-mRNA-1
chr8_1 CDS 12901042 12901701 12901042 ID=Msa1179480-mRNA-1:cds;Parent=Msa1179480-mRNA-1
chr8_1 three_prime_UTR 12901702 12902205 12901702 ID=Msa1179480-mRNA-1:three_prime_utr;Parent=Msa1179480-mRNA-1
Gene Sequence

>Msa1179480

ATGGGTGGTTCAGGAAGCTGGTTTAAATCACTTATAAGAAAGCCATCTACGAATAATCAAGAGAAGGGTATTGATAAGAGTAAGAGAAAATGGAAATTATGGAGAAATTCATCAGAAGTTATTGGATTTGGAACTTCTATGAAGAAGGGGCACAGTTTTGGTGCTTATGATAAATACTATTCTTCGTTTGTTGTGAATGAAGAAGCTTTTGCTGCTGCAATGGCTGCTGTGGTAAGAACTCCACACAAAGATTTCTTGGTGATCAAACAGGAATGGTCTGCCATCCGCATCCAGTCTGCTTTTCGAGGCTTCTTGGCAAGAAGAGCTTTAAGGGCTTTGAGGGCATTGGTGAGGCTGCAAGCAATATTTCGCGGCCGGTTAGTGAGAAAACAAGCAGCTGTTACTCTAAGGTGCATGCAGGCTCTTGTGCGAGTTCAAGAACGCCTCAAGGCAAAGAATGTCCGGAATTCTCCAGAAAAGAAAGCTAAGAAGGAACTATTAAACGAGCAACATAATCAAGCTGATCCTATTAAACAAGCTGAGCAAGGGTGGTGTGACTTACCAGGAACTGTGGAAGAAGTTAAAGCAAAACTAAAAATGAGGCAAGAAGGAGCAATTAAGAGAGATAGAACAATGTCATACACCAATTCCACCCTGCGATCAACAGCGAGTTCTAGTCCAAGCTCAAGAGGTTCTAAGCCATTGACTCCTCTCAATCAACACAGCTTAGACGGTAAGAGCATGTTAGAACGCTGGATTGCAGCTAAGCCATGGGAGAGCAGGTTAATGGGAGACATCTATTTGGACTCACCTGGCATGACTCCATCGTCCAGGAAGAATGAGAATGTTGAACTCTCCTTCAACTTATATCAACAACACGGCTTAGTAAAAGCAAGAAAAAATGGTGTAACAACTAGGGTTTCGTCTAAAACTCATACAACAAGCCAATCAACTCCGTCGTCTTCAGCTATAAGCTCTGAATGCATGTATGATGATAGCCCTTTATCAATTTCATCCACATCTGAATCACCAACCAGGGTGGAAGATGCAAAGAAAAGGGAAACTGGGAAACCGACCTACACTAATTTGACAGCGTCAACCAAAGCTAAGCTGAAAGCGTGTAGACATTCGTCTCCCAATTTGAAGAGACTCTTTATGGATGATGATTGTCTGTCTCGTAGCGCGCGAACAAATGTTCTAAGTGCAGATACTAGAAGCATTTCTGGTTCCTATTCTTCGGCTAATATATGGAAGGATCTTTATGCAACTCCTTTAAGGACAAGTTATCAAAATCGATTTACAATGGGACATAAGTAG
Protein sequence

>Msa1179480

MGGSGSWFKSLIRKPSTNNQEKGIDKSKRKWKLWRNSSEVIGFGTSMKKGHSFGAYDKYYSSFVVNEEAFAAAMAAVVRTPHKDFLVIKQEWSAIRIQSAFRGFLARRALRALRALVRLQAIFRGRLVRKQAAVTLRCMQALVRVQERLKAKNVRNSPEKKAKKELLNEQHNQADPIKQAEQGWCDLPGTVEEVKAKLKMRQEGAIKRDRTMSYTNSTLRSTASSSPSSRGSKPLTPLNQHSLDGKSMLERWIAAKPWESRLMGDIYLDSPGMTPSSRKNENVELSFNLYQQHGLVKARKNGVTTRVSSKTHTTSQSTPSSSAISSECMYDDSPLSISSTSESPTRVEDAKKRETGKPTYTNLTASTKAKLKACRHSSPNLKRLFMDDDCLSRSARTNVLSADTRSISGSYSSANIWKDLYATPLRTSYQNRFTMGHK*