AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1185300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1185300 MtrunA17_Chr8g0351041 100.000 60 0 0 11 70 1 60 9.48e-39 126
Msa1185300 MtrunA17_Chr8g0351031 98.333 60 1 0 11 70 1 60 1.45e-37 125
Msa1185300 MtrunA17_Chr7g0246431 95.000 60 3 0 11 70 1 60 3.21e-37 123
Msa1185300 MtrunA17_Chr4g0057151 88.333 60 7 0 11 70 1 60 7.94e-33 112
Msa1185300 MtrunA17_Chr3g0097101 70.000 70 21 0 8 77 13 82 1.44e-29 105
Msa1185300 MtrunA17_Chr2g0284911 71.642 67 19 0 4 70 9 75 6.67e-29 103
Msa1185300 MtrunA17_Chr8g0380021 78.689 61 13 0 10 70 16 76 8.01e-29 103
Msa1185300 MtrunA17_Chr3g0077501 78.333 60 13 0 11 70 1 60 8.75e-29 102
Msa1185300 MtrunA17_Chr7g0246381 76.667 60 14 0 11 70 1 60 9.16e-29 98.2
Msa1185300 MtrunA17_Chr4g0061671 73.333 60 16 0 11 70 1 60 6.61e-28 99.4
Msa1185300 MtrunA17_Chr8g0351051 77.966 59 13 0 11 69 1 59 8.79e-28 100
Msa1185300 MtrunA17_Chr5g0420091 74.576 59 15 0 11 69 1 59 1.31e-27 99.4
Msa1185300 MtrunA17_Chr7g0220111 75.000 60 15 0 11 70 1 60 1.38e-27 100
Msa1185300 MtrunA17_Chr8g0377561 75.862 58 14 0 11 68 1 58 1.49e-27 95.9
Msa1185300 MtrunA17_Chr6g0455511 76.667 60 14 0 11 70 1 60 1.52e-27 99.8
Msa1185300 MtrunA17_Chr1g0173161 68.182 66 21 0 11 76 1 66 1.60e-27 95.1
Msa1185300 MtrunA17_Chr3g0122251 76.667 60 14 0 11 70 1 60 2.24e-27 99.4
Msa1185300 MtrunA17_Chr5g0427921 68.852 61 19 0 11 71 1 61 3.44e-27 93.6
Msa1185300 MtrunA17_Chr2g0279821 64.286 70 25 0 11 80 1 70 8.62e-27 97.8
Msa1185300 MtrunA17_Chr2g0308251 66.154 65 22 0 11 75 1 65 1.12e-26 93.2
Msa1185300 MtrunA17_Chr1g0204111 55.844 77 34 0 1 77 7 83 8.99e-26 95.5
Msa1185300 MtrunA17_Chr4g0020221 67.143 70 16 1 11 73 1 70 1.12e-25 95.1
Msa1185300 MtrunA17_Chr8g0366231 71.667 60 17 0 11 70 1 60 3.84e-25 93.6
Msa1185300 MtrunA17_Chr4g0061691 70.000 60 18 0 11 70 1 60 6.93e-25 92.8
Msa1185300 MtrunA17_Chr6g0474371 68.333 60 19 0 11 70 1 60 9.20e-25 91.3
Msa1185300 MtrunA17_Chr4g0049541 61.429 70 27 0 11 80 1 70 3.04e-24 90.9
Msa1185300 MtrunA17_Chr5g0411691 54.430 79 29 1 11 82 1 79 4.07e-24 90.9
Msa1185300 MtrunA17_Chr4g0018421 67.797 59 19 0 11 69 1 59 4.97e-24 89.7
Msa1185300 MtrunA17_Chr5g0427401 60.606 66 26 0 11 76 1 66 5.40e-24 90.1
Msa1185300 MtrunA17_Chr5g0425191 65.574 61 21 0 11 71 1 61 1.22e-23 85.9
Msa1185300 MtrunA17_Chr5g0412271 67.797 59 19 0 11 69 1 59 1.88e-23 89.0
Msa1185300 MtrunA17_Chr7g0220121 68.333 60 19 0 11 70 1 60 1.95e-23 89.4
Msa1185300 MtrunA17_Chr3g0142191 67.797 59 19 0 11 69 1 59 2.27e-23 88.6
Msa1185300 MtrunA17_Chr5g0412461 67.797 59 19 0 11 69 1 59 2.54e-23 88.6
Msa1185300 MtrunA17_Chr4g0044071 62.295 61 23 0 11 71 1 61 4.82e-23 84.7
Msa1185300 MtrunA17_Chr4g0049901 58.571 70 29 0 11 80 27 96 1.40e-22 86.7
Msa1185300 MtrunA17_Chr5g0420081 65.000 60 21 0 11 70 1 60 1.85e-22 86.3
Msa1185300 MtrunA17_Chr3g0125241 61.017 59 23 0 11 69 26 84 2.73e-22 85.5
Msa1185300 MtrunA17_Chr1g0159661 55.932 59 26 0 11 69 1 59 2.19e-21 82.4
Msa1185300 MtrunA17_Chr1g0164791 60.000 60 24 0 11 70 1 60 9.55e-21 82.0
Msa1185300 MtrunA17_Chr5g0404951 61.017 59 23 0 11 69 1 59 1.63e-20 81.3
Msa1185300 MtrunA17_Chr3g0134451 67.213 61 20 0 11 71 1 61 1.80e-20 82.4
Msa1185300 MtrunA17_Chr1g0166611 73.469 49 13 0 23 71 17 65 8.88e-20 77.0
Msa1185300 MtrunA17_Chr2g0333981 47.368 76 40 0 1 76 1 76 1.57e-18 75.1
Msa1185300 MtrunA17_Chr1g0208581 52.381 63 30 0 13 75 10 72 4.57e-18 74.7
Msa1185300 MtrunA17_Chr8g0376821 52.308 65 31 0 11 75 1 65 6.78e-18 73.6
Msa1185300 MtrunA17_Chr2g0292791 53.968 63 29 0 13 75 10 72 1.62e-17 73.6
Msa1185300 MtrunA17_Chr1g0169761 52.308 65 31 0 11 75 1 65 1.69e-17 72.4
Msa1185300 MtrunA17_Chr8g0379021 47.143 70 37 0 7 76 7 76 1.95e-17 72.0
Msa1185300 MtrunA17_Chr4g0074101 50.769 65 32 0 11 75 1 65 2.79e-17 72.0
Msa1185300 MtrunA17_Chr1g0208561 50.794 63 31 0 13 75 10 72 3.32e-17 72.4
Msa1185300 MtrunA17_Chr3g0089141 50.794 63 31 0 13 75 10 72 3.58e-17 72.4
Msa1185300 MtrunA17_Chr1g0175611 50.769 65 32 0 11 75 1 65 7.07e-17 70.5
Msa1185300 MtrunA17_Chr1g0175601 50.769 65 32 0 11 75 1 65 9.15e-17 70.5
Msa1185300 MtrunA17_Chr4g0052081 47.692 65 34 0 11 75 1 65 1.49e-16 69.7
Msa1185300 MtrunA17_Chr1g0180591 49.231 65 33 0 11 75 1 65 2.09e-16 69.3
Msa1185300 MtrunA17_Chr4g0052061 46.154 65 35 0 11 75 1 65 2.38e-16 68.9
Msa1185300 MtrunA17_Chr4g0018951 56.604 53 23 0 24 76 24 76 2.73e-16 68.9
Msa1185300 MtrunA17_Chr3g0099411 50.000 64 32 0 13 76 10 73 3.44e-16 69.7
Msa1185300 MtrunA17_Chr8g0357771 49.231 65 33 0 11 75 1 65 3.70e-16 68.9
Msa1185300 MtrunA17_Chr1g0149391 48.485 66 34 0 13 78 10 75 3.92e-16 69.7
Msa1185300 MtrunA17_Chr5g0417661 52.830 53 25 0 11 63 56 108 4.82e-16 67.4
Msa1185300 MtrunA17_Chr1g0206721 50.000 64 32 0 13 76 10 73 5.30e-16 69.3
Msa1185300 MtrunA17_Chr8g0355091 50.794 63 31 0 13 75 10 72 6.01e-16 69.3
Msa1185300 MtrunA17_Chr1g0206701 50.794 63 31 0 13 75 10 72 6.47e-16 69.3
Msa1185300 MtrunA17_Chr5g0419601 42.857 84 39 1 8 82 5 88 8.58e-16 68.9
Msa1185300 MtrunA17_Chr5g0422421 50.000 66 33 0 13 78 10 75 8.67e-16 68.9
Msa1185300 MtrunA17_Chr3g0099421 53.968 63 29 0 13 75 35 97 1.13e-15 68.9
Msa1185300 MtrunA17_Chr2g0300421 46.875 64 34 0 13 76 10 73 1.18e-15 67.4
Msa1185300 MtrunA17_Chr2g0325971 49.206 63 32 0 13 75 10 72 1.59e-15 68.2
Msa1185300 MtrunA17_Chr1g0187361 55.357 56 25 0 13 68 10 65 2.65e-15 67.8
Msa1185300 MtrunA17_Chr1g0206991 46.875 64 34 0 13 76 10 73 3.75e-15 66.2
Msa1185300 MtrunA17_Chr1g0188671 52.459 61 29 0 8 68 43 103 6.64e-15 67.0
Msa1185300 MtrunA17_Chr2g0317481 49.206 63 32 0 13 75 10 72 9.84e-15 66.2
Msa1185300 MtrunA17_Chr2g0317451 49.206 63 32 0 13 75 10 72 9.94e-15 66.2
Msa1185300 MtrunA17_Chr3g0111841 48.276 58 30 0 18 75 2 59 3.30e-14 61.2
Msa1185300 MtrunA17_Chr8g0356071 43.077 65 37 0 11 75 1 65 3.35e-14 63.5
Msa1185300 MtrunA17_Chr5g0422941 49.206 63 32 0 13 75 10 72 3.39e-14 64.7
Msa1185300 MtrunA17_Chr4g0071601 46.053 76 41 0 1 76 1 76 8.84e-14 62.8
Msa1185300 MtrunA17_Chr3g0119901 40.845 71 42 0 6 76 3 73 1.19e-13 62.8
Msa1185300 MtrunA17_Chr3g0089151 42.647 68 37 1 12 77 7 74 3.44e-13 60.1
Msa1185300 MtrunA17_Chr4g0060841 46.032 63 34 0 11 73 1 63 3.81e-13 62.8
Msa1185300 MtrunA17_Chr3g0085241 40.580 69 41 0 7 75 36 104 3.90e-13 62.0
Msa1185300 MtrunA17_Chr1g0187351 49.091 55 28 0 21 75 1 55 4.58e-13 58.2
Msa1185300 MtrunA17_Chr2g0300441 45.902 61 33 0 15 75 12 72 5.84e-13 61.2
Msa1185300 MtrunA17_Chr1g0206691 47.273 55 29 0 21 75 1 55 3.43e-12 58.9
Msa1185300 MtrunA17_Chr6g0457851 50.000 52 26 0 9 60 9 60 6.83e-12 58.9
Msa1185300 MtrunA17_Chr3g0093131 52.000 50 23 1 29 77 36 85 8.41e-12 57.8
Msa1185300 MtrunA17_Chr8g0345001 37.333 75 47 0 4 78 10 84 7.86e-11 55.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1185300 AT2G45660.2 93.333 60 4 0 11 70 1 60 4.40e-37 122
Msa1185300 AT4G11880.2 93.333 60 4 0 11 70 1 60 1.55e-36 121
Msa1185300 AT4G11880.3 93.333 60 4 0 11 70 1 60 1.55e-36 121
Msa1185300 AT2G45660.1 93.333 60 4 0 11 70 1 60 2.40e-36 122
Msa1185300 AT4G11880.4 93.333 60 4 0 11 70 1 60 5.89e-36 121
Msa1185300 AT4G11880.1 93.333 60 4 0 11 70 1 60 5.89e-36 121
Msa1185300 AT4G22950.2 82.090 67 12 0 11 77 1 67 9.06e-36 119
Msa1185300 AT4G22950.3 82.090 67 12 0 11 77 1 67 4.89e-35 118
Msa1185300 AT4G22950.1 82.090 67 12 0 11 77 1 67 4.89e-35 118
Msa1185300 AT5G62165.6 83.333 60 10 0 11 70 1 60 5.32e-33 111
Msa1185300 AT5G62165.9 83.333 60 10 0 11 70 1 60 5.32e-33 111
Msa1185300 AT5G62165.7 83.333 60 10 0 11 70 1 60 5.32e-33 111
Msa1185300 AT5G62165.8 83.333 60 10 0 11 70 1 60 5.32e-33 111
Msa1185300 AT5G62165.13 83.333 60 10 0 11 70 1 60 5.32e-33 111
Msa1185300 AT5G62165.17 83.333 60 10 0 11 70 1 60 6.01e-33 111
Msa1185300 AT5G62165.12 83.333 60 10 0 11 70 1 60 6.01e-33 111
Msa1185300 AT5G62165.11 83.333 60 10 0 11 70 1 60 6.01e-33 111
Msa1185300 AT5G62165.14 83.333 60 10 0 11 70 1 60 7.27e-33 109
Msa1185300 AT5G62165.10 83.333 60 10 0 11 70 1 60 3.20e-32 110
Msa1185300 AT5G62165.4 83.333 60 10 0 11 70 1 60 3.20e-32 110
Msa1185300 AT5G62165.3 83.333 60 10 0 11 70 1 60 3.71e-32 111
Msa1185300 AT5G62165.1 83.333 60 10 0 11 70 1 60 3.71e-32 111
Msa1185300 AT5G62165.2 83.333 60 10 0 11 70 1 60 3.71e-32 111
Msa1185300 AT3G58780.2 76.190 63 15 0 10 72 15 77 2.29e-30 107
Msa1185300 AT4G09960.2 80.000 60 12 0 11 70 1 60 1.14e-29 104
Msa1185300 AT4G09960.1 80.000 60 12 0 11 70 1 60 1.25e-29 105
Msa1185300 AT4G09960.6 80.000 60 12 0 11 70 2 61 1.43e-29 105
Msa1185300 AT4G09960.5 80.000 60 12 0 11 70 11 70 2.05e-29 104
Msa1185300 AT4G09960.3 78.689 61 13 0 10 70 26 86 2.32e-29 105
Msa1185300 AT4G09960.4 78.689 61 13 0 10 70 95 155 7.87e-29 105
Msa1185300 AT2G42830.1 75.410 61 15 0 10 70 15 75 1.81e-28 102
Msa1185300 AT2G42830.2 75.410 61 15 0 10 70 15 75 1.91e-28 102
Msa1185300 AT3G58780.1 75.410 61 15 0 10 70 15 75 1.97e-28 102
Msa1185300 AT3G58780.5 75.410 61 15 0 10 70 21 81 2.14e-28 102
Msa1185300 AT3G58780.3 73.016 63 17 0 10 72 15 77 2.57e-28 102
Msa1185300 AT2G45650.1 68.493 73 16 1 11 76 1 73 3.11e-28 102
Msa1185300 AT2G03710.3 75.000 60 15 0 11 70 1 60 3.68e-28 100
Msa1185300 AT3G58780.4 71.014 69 19 1 2 70 8 75 4.19e-28 102
Msa1185300 AT5G51860.2 76.667 60 14 0 11 70 1 60 8.43e-28 99.8
Msa1185300 AT4G18960.1 77.049 61 14 0 10 70 16 76 8.52e-28 100
Msa1185300 AT5G51860.1 76.667 60 14 0 11 70 1 60 1.17e-27 99.8
Msa1185300 AT5G15800.1 76.667 60 14 0 11 70 1 60 1.25e-27 100
Msa1185300 AT3G57230.2 67.164 67 22 0 11 77 1 67 1.71e-27 97.4
Msa1185300 AT2G03710.1 75.000 60 15 0 11 70 1 60 1.78e-27 100
Msa1185300 AT2G03710.2 75.000 60 15 0 11 70 1 60 1.83e-27 100
Msa1185300 AT5G15800.2 76.667 60 14 0 11 70 1 60 1.85e-27 100
Msa1185300 AT1G24260.3 76.667 60 14 0 11 70 1 60 1.95e-27 99.8
Msa1185300 AT1G24260.2 76.667 60 14 0 11 70 1 60 2.54e-27 99.8
Msa1185300 AT1G24260.1 76.667 60 14 0 11 70 1 60 2.65e-27 99.8
Msa1185300 AT3G02310.2 75.000 60 15 0 11 70 1 60 3.57e-27 98.2
Msa1185300 AT5G51870.2 68.182 66 21 0 11 76 1 66 4.20e-27 97.1
Msa1185300 AT3G57230.1 67.164 67 22 0 11 77 1 67 5.86e-27 98.6
Msa1185300 AT3G57230.4 67.164 67 22 0 11 77 1 67 5.86e-27 98.6
Msa1185300 AT5G51870.5 66.667 69 23 0 8 76 21 89 6.34e-27 97.4
Msa1185300 AT5G51870.1 68.182 66 21 0 11 76 1 66 6.75e-27 97.4
Msa1185300 AT5G51870.4 68.182 66 21 0 11 76 1 66 1.30e-26 97.1
Msa1185300 AT5G51870.3 68.182 66 21 0 11 76 11 76 2.00e-26 97.1
Msa1185300 AT5G13790.1 75.000 60 15 0 11 70 1 60 2.54e-25 94.7
Msa1185300 AT5G13790.2 75.000 60 15 0 11 70 1 60 2.91e-25 94.7
Msa1185300 AT2G22540.3 61.972 71 27 0 11 81 1 71 3.01e-25 94.0
Msa1185300 AT2G22540.1 61.972 71 27 0 11 81 1 71 3.01e-25 94.0
Msa1185300 AT4G37940.3 61.429 70 27 0 11 80 1 70 5.70e-25 91.7
Msa1185300 AT5G60910.1 70.000 60 18 0 11 70 1 60 6.33e-25 93.2
Msa1185300 AT3G61120.1 71.186 59 17 0 11 69 1 59 6.87e-25 93.2
Msa1185300 AT3G02310.1 75.000 60 15 0 11 70 1 60 8.29e-25 93.2
Msa1185300 AT4G37940.4 61.429 70 27 0 11 80 1 70 8.43e-25 92.4
Msa1185300 AT4G37940.1 61.429 70 27 0 11 80 1 70 8.73e-25 92.8
Msa1185300 AT3G57390.3 69.492 59 18 0 11 69 1 59 8.83e-25 92.4
Msa1185300 AT1G71692.1 67.797 59 19 0 11 69 1 59 1.07e-24 92.0
Msa1185300 AT2G14210.1 61.644 73 20 1 11 75 1 73 1.46e-24 92.0
Msa1185300 AT3G57390.1 69.492 59 18 0 11 69 1 59 1.58e-24 92.4
Msa1185300 AT1G69120.2 68.333 60 19 0 11 70 1 60 1.74e-24 92.0
Msa1185300 AT2G14210.2 61.644 73 20 1 11 75 1 73 1.85e-24 92.0
Msa1185300 AT3G30260.1 68.333 60 19 0 11 70 1 60 3.18e-24 91.7
Msa1185300 AT1G69120.1 68.333 60 19 0 11 70 1 60 4.66e-24 91.3
Msa1185300 AT4G24540.1 62.121 66 25 0 11 76 1 66 1.47e-23 89.4
Msa1185300 AT1G26310.1 69.492 59 18 0 11 69 1 59 1.55e-23 90.1
Msa1185300 AT3G54340.1 66.102 59 20 0 11 69 1 59 9.25e-23 87.4
Msa1185300 AT2G22630.1 65.000 60 21 0 11 70 1 60 2.75e-22 86.3
Msa1185300 AT2G22630.2 65.000 60 21 0 11 70 1 60 2.75e-22 86.3
Msa1185300 AT5G10140.2 67.797 59 19 0 11 69 1 59 3.33e-22 84.3
Msa1185300 AT5G10140.4 67.797 59 19 0 11 69 1 59 4.95e-22 84.3
Msa1185300 AT5G10140.3 67.797 59 19 0 11 69 1 59 5.70e-22 84.3
Msa1185300 AT5G10140.1 67.797 59 19 0 11 69 1 59 6.42e-22 84.3
Msa1185300 AT5G23260.3 63.934 61 22 0 11 71 1 61 1.14e-21 84.7
Msa1185300 AT2G22540.2 57.534 73 27 2 11 81 1 71 1.66e-21 84.3
Msa1185300 AT5G20240.2 62.069 58 22 0 11 68 1 58 2.68e-21 81.6
Msa1185300 AT5G65070.4 62.712 59 22 0 11 69 1 59 7.43e-21 80.5
Msa1185300 AT5G20240.1 62.069 58 22 0 11 68 1 58 1.27e-20 81.3
Msa1185300 AT5G65070.1 62.712 59 22 0 11 69 1 59 1.78e-20 80.9
Msa1185300 AT5G65070.2 62.712 59 22 0 11 69 1 59 4.53e-20 80.5
Msa1185300 AT5G65070.5 62.712 59 22 0 11 69 1 59 4.61e-20 80.1
Msa1185300 AT5G23260.1 59.701 67 27 0 5 71 11 77 4.75e-20 80.9
Msa1185300 AT5G23260.4 59.701 67 27 0 5 71 11 77 6.10e-20 80.9
Msa1185300 AT5G65070.3 62.712 59 22 0 11 69 1 59 6.47e-20 80.1
Msa1185300 AT1G22130.1 62.687 67 24 1 11 76 1 67 1.71e-19 80.5
Msa1185300 AT5G65050.2 59.322 59 24 0 11 69 1 59 2.81e-19 77.4
Msa1185300 AT5G23260.2 63.934 61 22 0 11 71 1 61 3.68e-19 78.6
Msa1185300 AT1G77980.1 61.194 67 25 1 11 76 1 67 4.19e-19 79.3
Msa1185300 AT5G65050.1 59.322 59 24 0 11 69 1 59 6.82e-19 76.3
Msa1185300 AT5G65050.5 59.322 59 24 0 11 69 1 59 7.33e-19 76.3
Msa1185300 AT5G65050.3 59.322 59 24 0 11 69 1 59 7.42e-19 76.6
Msa1185300 AT1G77950.3 58.621 58 24 0 11 68 1 58 1.96e-18 76.6
Msa1185300 AT1G77950.2 58.621 58 24 0 11 68 1 58 1.96e-18 76.6
Msa1185300 AT1G77950.1 58.621 58 24 0 11 68 1 58 1.96e-18 76.6
Msa1185300 AT1G77950.4 58.621 58 24 0 11 68 1 58 1.96e-18 76.6
Msa1185300 AT5G65060.3 55.932 59 26 0 11 69 1 59 1.50e-17 73.2
Msa1185300 AT5G65060.2 55.932 59 26 0 11 69 1 59 1.78e-17 72.8
Msa1185300 AT5G65060.1 55.932 59 26 0 11 69 1 59 1.97e-17 72.8
Msa1185300 AT1G31140.1 55.000 60 27 0 11 70 1 60 2.84e-17 72.8
Msa1185300 AT1G31140.2 55.000 60 27 0 11 70 1 60 2.88e-17 72.8
Msa1185300 AT5G65080.3 53.125 64 30 0 6 69 3 66 3.19e-17 72.4
Msa1185300 AT5G65080.2 53.125 64 30 0 6 69 3 66 4.24e-17 72.0
Msa1185300 AT4G37435.1 57.895 57 24 0 11 67 1 57 6.48e-17 71.2
Msa1185300 AT3G66656.1 46.154 65 35 0 11 75 1 65 7.92e-17 70.9
Msa1185300 AT1G01530.1 45.070 71 39 0 8 78 3 73 9.77e-17 72.0
Msa1185300 AT2G34440.1 46.154 65 35 0 11 75 1 65 2.08e-16 69.7
Msa1185300 AT1G18750.3 54.386 57 26 0 11 67 1 57 9.26e-16 70.5
Msa1185300 AT1G18750.1 54.386 57 26 0 11 67 1 57 9.89e-16 70.5
Msa1185300 AT1G18750.4 54.386 57 26 0 11 67 1 57 1.16e-15 70.1
Msa1185300 AT4G36590.1 57.143 56 24 0 13 68 8 63 4.52e-15 67.4
Msa1185300 AT1G77080.12 54.286 70 31 1 11 79 1 70 9.71e-15 64.7
Msa1185300 AT5G60440.1 49.206 63 32 0 13 75 8 70 1.21e-14 67.0
Msa1185300 AT1G77080.5 59.322 59 24 0 11 69 1 59 2.21e-14 64.3
Msa1185300 AT1G77080.11 59.322 59 24 0 11 69 1 59 2.34e-14 64.3
Msa1185300 AT1G77080.2 54.286 70 31 1 11 79 1 70 2.66e-14 64.7
Msa1185300 AT2G24840.1 47.059 68 36 0 9 76 60 127 3.07e-14 65.5
Msa1185300 AT1G77080.4 59.322 59 24 0 11 69 1 59 5.51e-14 63.9
Msa1185300 AT1G65360.1 39.437 71 43 0 8 78 3 73 7.61e-14 63.9
Msa1185300 AT1G77080.8 59.322 59 24 0 11 69 1 59 1.22e-13 63.5
Msa1185300 AT1G72350.1 56.140 57 25 0 13 69 44 100 1.39e-13 63.2
Msa1185300 AT2G03060.3 54.717 53 24 0 11 63 1 53 1.40e-13 64.3
Msa1185300 AT2G03060.7 54.717 53 24 0 11 63 1 53 1.40e-13 64.3
Msa1185300 AT2G03060.1 54.717 53 24 0 11 63 1 53 1.40e-13 64.3
Msa1185300 AT2G03060.2 54.717 53 24 0 11 63 1 53 2.03e-13 63.9
Msa1185300 AT1G29962.1 47.143 70 35 1 8 75 2 71 3.02e-13 61.6
Msa1185300 AT1G69540.2 50.943 53 26 0 11 63 1 53 3.08e-13 63.2
Msa1185300 AT1G47760.1 43.284 67 38 0 11 77 1 67 3.34e-13 61.6
Msa1185300 AT1G28460.1 49.180 61 31 0 15 75 11 71 3.91e-13 61.2
Msa1185300 AT1G69540.1 50.943 53 26 0 11 63 1 53 6.44e-13 62.4
Msa1185300 AT2G26320.1 52.830 53 25 0 8 60 14 66 2.08e-12 57.8
Msa1185300 AT3G04100.1 44.262 61 34 0 15 75 17 77 2.78e-12 59.7

Find 18 sgRNAs with CRISPR-Local

Find 278 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAATCATTTATTTCTTAATA+TGG 0.167043 8_1:-22315358 Msa1185300:five_prime_UTR
CTTAATATGGTGGGGTAAGA+TGG 0.331970 8_1:-22315345 Msa1185300:five_prime_UTR
ACATTCTCAAAGAGGAGAAA+TGG 0.421788 8_1:-22314465 Msa1185300:CDS
CATTTATTTCTTAATATGGT+GGG 0.422909 8_1:-22315354 Msa1185300:five_prime_UTR
TTAATATGGTGGGGTAAGAT+GGG 0.445741 8_1:-22315344 Msa1185300:five_prime_UTR
TGGTGGGGTAAGATGGGGTC+AGG 0.482684 8_1:-22315338 Msa1185300:five_prime_UTR
TCATTTATTTCTTAATATGG+TGG 0.491560 8_1:-22315355 Msa1185300:five_prime_UTR
TTTATGAATTTGCTAGCTCT+AGG 0.521973 8_1:-22314362 Msa1185300:intron
TGGGGTCAGGTTGATTAATG+AGG 0.540818 8_1:-22315325 Msa1185300:exon
ATTTATTTCTTAATATGGTG+GGG 0.544084 8_1:-22315353 Msa1185300:five_prime_UTR
AATTCATAAAGCCTCCCTCT+TGG 0.547865 8_1:+22314375 None:intergenic
TCAGGTTGATTAATGAGGAA+AGG 0.559252 8_1:-22315320 Msa1185300:intron
ATCAGTGTTGTGTGATGCTG+AGG 0.567431 8_1:-22314418 Msa1185300:CDS
GGCAAGTAACATTCTCAAAG+AGG 0.594159 8_1:-22314473 Msa1185300:CDS
ACACAACACTGATAACTCAA+AGG 0.620897 8_1:+22314428 None:intergenic
TAATATGGTGGGGTAAGATG+GGG 0.636610 8_1:-22315343 Msa1185300:five_prime_UTR
GTATAGAGAACGCAACAAGT+AGG 0.642404 8_1:-22314494 Msa1185300:CDS
TTACCATTACAGATATAATG+CGG 0.655613 8_1:-22313230 Msa1185300:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTCTTGAAAAAATTAAA+TGG + chr8_1:22313652-22313671 None:intergenic 10.0%
!!! ACTTTTTTTTTTTTTTTTGA+AGG - chr8_1:22315042-22315061 Msa1185300:intron 10.0%
!!! ATACTGTAATTATTATATTT+TGG - chr8_1:22315281-22315300 Msa1185300:intron 10.0%
!! AATTTCTTGAAAAAATTAAA+TGG + chr8_1:22313652-22313671 None:intergenic 10.0%
!!! ACTTTTTTTTTTTTTTTTGA+AGG - chr8_1:22315042-22315061 Msa1185300:intron 10.0%
!!! ATACTGTAATTATTATATTT+TGG - chr8_1:22315281-22315300 Msa1185300:intron 10.0%
!!! CAATCATTTATTTCTTAATA+TGG - chr8_1:22313210-22313229 Msa1185300:CDS 15.0%
!! TAAAAAATAAATAAGAGTCA+AGG + chr8_1:22313409-22313428 None:intergenic 15.0%
!!! TTTCTTTTATTTTTCCAATT+TGG - chr8_1:22313500-22313519 Msa1185300:intron 15.0%
!!! TTTTTGTTATGAATTGAAAT+AGG - chr8_1:22313925-22313944 Msa1185300:intron 15.0%
!! ATTAATTAAGTCGAAAAAAA+AGG + chr8_1:22314237-22314256 None:intergenic 15.0%
!! TGTTAGATTAAATATTTAAG+AGG - chr8_1:22314378-22314397 Msa1185300:CDS 15.0%
!! GTTAGATTAAATATTTAAGA+GGG - chr8_1:22314379-22314398 Msa1185300:CDS 15.0%
!!! TTTTTATTGACTAAACAAAT+AGG - chr8_1:22314499-22314518 Msa1185300:CDS 15.0%
!! TGATAACATTAAGTTATATA+GGG - chr8_1:22314986-22315005 Msa1185300:intron 15.0%
!! AATGCAAATATATATATCAA+AGG + chr8_1:22315087-22315106 None:intergenic 15.0%
!! TTTAAAAAATAATGTGTACT+TGG - chr8_1:22315105-22315124 Msa1185300:intron 15.0%
!!! CAATCATTTATTTCTTAATA+TGG - chr8_1:22313210-22313229 Msa1185300:CDS 15.0%
!! TAAAAAATAAATAAGAGTCA+AGG + chr8_1:22313409-22313428 None:intergenic 15.0%
!!! TTTCTTTTATTTTTCCAATT+TGG - chr8_1:22313500-22313519 Msa1185300:intron 15.0%
!!! TTTTTGTTATGAATTGAAAT+AGG - chr8_1:22313925-22313944 Msa1185300:intron 15.0%
!! ATTAATTAAGTCGAAAAAAA+AGG + chr8_1:22314237-22314256 None:intergenic 15.0%
!! TGTTAGATTAAATATTTAAG+AGG - chr8_1:22314378-22314397 Msa1185300:CDS 15.0%
!! GTTAGATTAAATATTTAAGA+GGG - chr8_1:22314379-22314398 Msa1185300:CDS 15.0%
!!! TTTTTATTGACTAAACAAAT+AGG - chr8_1:22314499-22314518 Msa1185300:CDS 15.0%
!! TGATAACATTAAGTTATATA+GGG - chr8_1:22314986-22315005 Msa1185300:intron 15.0%
!! AATGCAAATATATATATCAA+AGG + chr8_1:22315087-22315106 None:intergenic 15.0%
!! TTTAAAAAATAATGTGTACT+TGG - chr8_1:22315105-22315124 Msa1185300:intron 15.0%
!!! TCATTTATTTCTTAATATGG+TGG - chr8_1:22313213-22313232 Msa1185300:CDS 20.0%
!!! CATTTATTTCTTAATATGGT+GGG - chr8_1:22313214-22313233 Msa1185300:CDS 20.0%
!!! ATTTATTTCTTAATATGGTG+GGG - chr8_1:22313215-22313234 Msa1185300:CDS 20.0%
!!! ATTATGTATCACTACTTTTT+TGG - chr8_1:22313352-22313371 Msa1185300:intron 20.0%
!!! TTATGTATCACTACTTTTTT+GGG - chr8_1:22313353-22313372 Msa1185300:intron 20.0%
!! ATAAAAGAAAAAATGAACCA+AGG + chr8_1:22313490-22313509 None:intergenic 20.0%
!! GAATTATATCTCATAAAAGA+AGG + chr8_1:22313587-22313606 None:intergenic 20.0%
!!! CTTTTATGAGATATAATTCT+TGG - chr8_1:22313588-22313607 Msa1185300:intron 20.0%
!! AAAATAGATTCCTAGAAAAA+GGG + chr8_1:22313626-22313645 None:intergenic 20.0%
!! TAAAATAGATTCCTAGAAAA+AGG + chr8_1:22313627-22313646 None:intergenic 20.0%
!! TTAAGATCTAGAAAACTATA+AGG + chr8_1:22313837-22313856 None:intergenic 20.0%
!!! TAGTTTTCTAGATCTTAAAA+AGG - chr8_1:22313839-22313858 Msa1185300:intron 20.0%
!! AGAGAAAAGAAAAGAAAAAA+TGG - chr8_1:22314027-22314046 Msa1185300:intron 20.0%
!! TTCTAATTCCAATGTTATAT+TGG - chr8_1:22314435-22314454 Msa1185300:CDS 20.0%
!! TTATGATTCCAATATAACAT+TGG + chr8_1:22314446-22314465 None:intergenic 20.0%
!! GGAAATTTATATATATGAGT+TGG + chr8_1:22314538-22314557 None:intergenic 20.0%
!! TTTGTGATTTATATAATCGA+AGG + chr8_1:22314559-22314578 None:intergenic 20.0%
!! GAAAAACATGTTATATAGTA+TGG + chr8_1:22314659-22314678 None:intergenic 20.0%
!!! CATATATCAAGTTTTGATTT+CGG + chr8_1:22314896-22314915 None:intergenic 20.0%
!! CTGATAACATTAAGTTATAT+AGG - chr8_1:22314985-22315004 Msa1185300:intron 20.0%
!!! TTATATTTTGGTTTTCGTAA+AGG - chr8_1:22315293-22315312 Msa1185300:intron 20.0%
!!! TATATTTTGGTTTTCGTAAA+GGG - chr8_1:22315294-22315313 Msa1185300:intron 20.0%
!!! TCATTTATTTCTTAATATGG+TGG - chr8_1:22313213-22313232 Msa1185300:CDS 20.0%
!!! CATTTATTTCTTAATATGGT+GGG - chr8_1:22313214-22313233 Msa1185300:CDS 20.0%
!!! ATTTATTTCTTAATATGGTG+GGG - chr8_1:22313215-22313234 Msa1185300:CDS 20.0%
!!! ATTATGTATCACTACTTTTT+TGG - chr8_1:22313352-22313371 Msa1185300:intron 20.0%
!!! TTATGTATCACTACTTTTTT+GGG - chr8_1:22313353-22313372 Msa1185300:intron 20.0%
!! ATAAAAGAAAAAATGAACCA+AGG + chr8_1:22313490-22313509 None:intergenic 20.0%
!! GAATTATATCTCATAAAAGA+AGG + chr8_1:22313587-22313606 None:intergenic 20.0%
!!! CTTTTATGAGATATAATTCT+TGG - chr8_1:22313588-22313607 Msa1185300:intron 20.0%
!! AAAATAGATTCCTAGAAAAA+GGG + chr8_1:22313626-22313645 None:intergenic 20.0%
!! TAAAATAGATTCCTAGAAAA+AGG + chr8_1:22313627-22313646 None:intergenic 20.0%
!! TTAAGATCTAGAAAACTATA+AGG + chr8_1:22313837-22313856 None:intergenic 20.0%
!!! TAGTTTTCTAGATCTTAAAA+AGG - chr8_1:22313839-22313858 Msa1185300:intron 20.0%
!! AGAGAAAAGAAAAGAAAAAA+TGG - chr8_1:22314027-22314046 Msa1185300:intron 20.0%
!! TTCTAATTCCAATGTTATAT+TGG - chr8_1:22314435-22314454 Msa1185300:CDS 20.0%
!! TTATGATTCCAATATAACAT+TGG + chr8_1:22314446-22314465 None:intergenic 20.0%
!! GGAAATTTATATATATGAGT+TGG + chr8_1:22314538-22314557 None:intergenic 20.0%
!! TTTGTGATTTATATAATCGA+AGG + chr8_1:22314559-22314578 None:intergenic 20.0%
!! GAAAAACATGTTATATAGTA+TGG + chr8_1:22314659-22314678 None:intergenic 20.0%
!!! CATATATCAAGTTTTGATTT+CGG + chr8_1:22314896-22314915 None:intergenic 20.0%
!! CTGATAACATTAAGTTATAT+AGG - chr8_1:22314985-22315004 Msa1185300:intron 20.0%
!!! TTATATTTTGGTTTTCGTAA+AGG - chr8_1:22315293-22315312 Msa1185300:intron 20.0%
!!! TATATTTTGGTTTTCGTAAA+GGG - chr8_1:22315294-22315313 Msa1185300:intron 20.0%
! ACATAATTGAGGTAAATTCA+AGG + chr8_1:22313339-22313358 None:intergenic 25.0%
! AAAGTAGTGATACATAATTG+AGG + chr8_1:22313350-22313369 None:intergenic 25.0%
!!! TATGTATCACTACTTTTTTG+GGG - chr8_1:22313354-22313373 Msa1185300:intron 25.0%
! TATATCTCATAAAAGAAGGT+GGG + chr8_1:22313583-22313602 None:intergenic 25.0%
! TTATATCTCATAAAAGAAGG+TGG + chr8_1:22313584-22313603 None:intergenic 25.0%
! TATGAGATATAATTCTTGGT+AGG - chr8_1:22313592-22313611 Msa1185300:intron 25.0%
!! AAATGGACGGAAAATTTTAA+GGG + chr8_1:22313769-22313788 None:intergenic 25.0%
! TTTAAACCTTGTAAGGAAAA+GGG + chr8_1:22313878-22313897 None:intergenic 25.0%
! ATTTAAACCTTGTAAGGAAA+AGG + chr8_1:22313879-22313898 None:intergenic 25.0%
! AACACAATTTAAACCTTGTA+AGG + chr8_1:22313885-22313904 None:intergenic 25.0%
!! TAAATTGTGTTTTTCCTTCT+TGG - chr8_1:22313894-22313913 Msa1185300:intron 25.0%
! ACAACACAACAACAAAAATT+AGG + chr8_1:22313998-22314017 None:intergenic 25.0%
!! TCATGCTAATCTTTTATTGT+TGG + chr8_1:22314845-22314864 None:intergenic 25.0%
! TATAACTTGATGTTATGGTT+GGG + chr8_1:22314959-22314978 None:intergenic 25.0%
! ATATAACTTGATGTTATGGT+TGG + chr8_1:22314960-22314979 None:intergenic 25.0%
! ACAGATATAACTTGATGTTA+TGG + chr8_1:22314964-22314983 None:intergenic 25.0%
! TTACCATTACAGATATAATG+CGG - chr8_1:22315338-22315357 Msa1185300:five_prime_UTR 25.0%
! ACATAATTGAGGTAAATTCA+AGG + chr8_1:22313339-22313358 None:intergenic 25.0%
! AAAGTAGTGATACATAATTG+AGG + chr8_1:22313350-22313369 None:intergenic 25.0%
!!! TATGTATCACTACTTTTTTG+GGG - chr8_1:22313354-22313373 Msa1185300:intron 25.0%
! TATATCTCATAAAAGAAGGT+GGG + chr8_1:22313583-22313602 None:intergenic 25.0%
! TTATATCTCATAAAAGAAGG+TGG + chr8_1:22313584-22313603 None:intergenic 25.0%
! TATGAGATATAATTCTTGGT+AGG - chr8_1:22313592-22313611 Msa1185300:intron 25.0%
!! AAATGGACGGAAAATTTTAA+GGG + chr8_1:22313769-22313788 None:intergenic 25.0%
! TTTAAACCTTGTAAGGAAAA+GGG + chr8_1:22313878-22313897 None:intergenic 25.0%
! ATTTAAACCTTGTAAGGAAA+AGG + chr8_1:22313879-22313898 None:intergenic 25.0%
! AACACAATTTAAACCTTGTA+AGG + chr8_1:22313885-22313904 None:intergenic 25.0%
!! TAAATTGTGTTTTTCCTTCT+TGG - chr8_1:22313894-22313913 Msa1185300:intron 25.0%
! ACAACACAACAACAAAAATT+AGG + chr8_1:22313998-22314017 None:intergenic 25.0%
!! TCATGCTAATCTTTTATTGT+TGG + chr8_1:22314845-22314864 None:intergenic 25.0%
! TATAACTTGATGTTATGGTT+GGG + chr8_1:22314959-22314978 None:intergenic 25.0%
! ATATAACTTGATGTTATGGT+TGG + chr8_1:22314960-22314979 None:intergenic 25.0%
! ACAGATATAACTTGATGTTA+TGG + chr8_1:22314964-22314983 None:intergenic 25.0%
! TTACCATTACAGATATAATG+CGG - chr8_1:22315338-22315357 Msa1185300:five_prime_UTR 25.0%
GTAAATTCAAGGAAAAGGAT+TGG + chr8_1:22313328-22313347 None:intergenic 30.0%
TTGAGGTAAATTCAAGGAAA+AGG + chr8_1:22313333-22313352 None:intergenic 30.0%
!!! ATGTATCACTACTTTTTTGG+GGG - chr8_1:22313355-22313374 Msa1185300:intron 30.0%
AGGAAAAGAATGGAAGAAAA+GGG + chr8_1:22313432-22313451 None:intergenic 30.0%
AAGGAAAAGAATGGAAGAAA+AGG + chr8_1:22313433-22313452 None:intergenic 30.0%
! TTCCATTCTTTTCCTTTTCT+AGG - chr8_1:22313437-22313456 Msa1185300:intron 30.0%
AGAAAAAATGAACCAAGGTA+CGG + chr8_1:22313485-22313504 None:intergenic 30.0%
AAGGGTGATTATATGAATGA+TGG + chr8_1:22313751-22313770 None:intergenic 30.0%
! CAAATGGACGGAAAATTTTA+AGG + chr8_1:22313770-22313789 None:intergenic 30.0%
! CTTAAAATTTTCCGTCCATT+TGG - chr8_1:22313768-22313787 Msa1185300:intron 30.0%
ACTCAATAAAACCAAATGGA+CGG + chr8_1:22313782-22313801 None:intergenic 30.0%
TACCACTCAATAAAACCAAA+TGG + chr8_1:22313786-22313805 None:intergenic 30.0%
AGGAAAAGGGATGAAAATAT+TGG + chr8_1:22313865-22313884 None:intergenic 30.0%
AGAAAAGAAAAAATGGTGAG+AGG - chr8_1:22314034-22314053 Msa1185300:intron 30.0%
! TTATTGTTTTCTCACCAAGA+GGG - chr8_1:22314179-22314198 Msa1185300:intron 30.0%
!! TTTATGAATTTGCTAGCTCT+AGG - chr8_1:22314206-22314225 Msa1185300:intron 30.0%
TTGTGTGATTGCATCTAATA+AGG - chr8_1:22314272-22314291 Msa1185300:intron 30.0%
TATTTAAGAGGGCTAATAAG+AGG - chr8_1:22314390-22314409 Msa1185300:CDS 30.0%
GAAAAGCCACAAAAAATTTC+AGG + chr8_1:22314418-22314437 None:intergenic 30.0%
TAAATCTCTTAGAGTGTGTT+TGG - chr8_1:22314579-22314598 Msa1185300:intron 30.0%
ATAACTTGATGTTATGGTTG+GGG + chr8_1:22314958-22314977 None:intergenic 30.0%
TATTGATCATACGATATTGC+AGG + chr8_1:22315264-22315283 None:intergenic 30.0%
GTAAATTCAAGGAAAAGGAT+TGG + chr8_1:22313328-22313347 None:intergenic 30.0%
TTGAGGTAAATTCAAGGAAA+AGG + chr8_1:22313333-22313352 None:intergenic 30.0%
!!! ATGTATCACTACTTTTTTGG+GGG - chr8_1:22313355-22313374 Msa1185300:intron 30.0%
AGGAAAAGAATGGAAGAAAA+GGG + chr8_1:22313432-22313451 None:intergenic 30.0%
AAGGAAAAGAATGGAAGAAA+AGG + chr8_1:22313433-22313452 None:intergenic 30.0%
! TTCCATTCTTTTCCTTTTCT+AGG - chr8_1:22313437-22313456 Msa1185300:intron 30.0%
AGAAAAAATGAACCAAGGTA+CGG + chr8_1:22313485-22313504 None:intergenic 30.0%
AAGGGTGATTATATGAATGA+TGG + chr8_1:22313751-22313770 None:intergenic 30.0%
! CAAATGGACGGAAAATTTTA+AGG + chr8_1:22313770-22313789 None:intergenic 30.0%
! CTTAAAATTTTCCGTCCATT+TGG - chr8_1:22313768-22313787 Msa1185300:intron 30.0%
ACTCAATAAAACCAAATGGA+CGG + chr8_1:22313782-22313801 None:intergenic 30.0%
TACCACTCAATAAAACCAAA+TGG + chr8_1:22313786-22313805 None:intergenic 30.0%
AGGAAAAGGGATGAAAATAT+TGG + chr8_1:22313865-22313884 None:intergenic 30.0%
AGAAAAGAAAAAATGGTGAG+AGG - chr8_1:22314034-22314053 Msa1185300:intron 30.0%
! TTATTGTTTTCTCACCAAGA+GGG - chr8_1:22314179-22314198 Msa1185300:intron 30.0%
!! TTTATGAATTTGCTAGCTCT+AGG - chr8_1:22314206-22314225 Msa1185300:intron 30.0%
TTGTGTGATTGCATCTAATA+AGG - chr8_1:22314272-22314291 Msa1185300:intron 30.0%
TATTTAAGAGGGCTAATAAG+AGG - chr8_1:22314390-22314409 Msa1185300:CDS 30.0%
GAAAAGCCACAAAAAATTTC+AGG + chr8_1:22314418-22314437 None:intergenic 30.0%
TAAATCTCTTAGAGTGTGTT+TGG - chr8_1:22314579-22314598 Msa1185300:intron 30.0%
ATAACTTGATGTTATGGTTG+GGG + chr8_1:22314958-22314977 None:intergenic 30.0%
TATTGATCATACGATATTGC+AGG + chr8_1:22315264-22315283 None:intergenic 30.0%
! TTAATATGGTGGGGTAAGAT+GGG - chr8_1:22313224-22313243 Msa1185300:intron 35.0%
!! TCAGGTTGATTAATGAGGAA+AGG - chr8_1:22313248-22313267 Msa1185300:intron 35.0%
GTTGATTAATGAGGAAAGGT+AGG - chr8_1:22313252-22313271 Msa1185300:intron 35.0%
TCAAGGAAAAGGATTGGATT+TGG + chr8_1:22313322-22313341 None:intergenic 35.0%
TGCCTAGAAAAGGAAAAGAA+TGG + chr8_1:22313442-22313461 None:intergenic 35.0%
! AATCTGCTTCATTTTGTTGC+TGG - chr8_1:22313527-22313546 Msa1185300:intron 35.0%
!!! GTCCATTTGGTTTTATTGAG+TGG - chr8_1:22313781-22313800 Msa1185300:intron 35.0%
! TTTCATCCCTTTTCCTTACA+AGG - chr8_1:22313869-22313888 Msa1185300:intron 35.0%
! TGTGTTTTTCCTTCTTGGTT+AGG - chr8_1:22313899-22313918 Msa1185300:intron 35.0%
CAAAAAAGTCCTAACCAAGA+AGG + chr8_1:22313911-22313930 None:intergenic 35.0%
ACATTCTCAAAGAGGAGAAA+TGG - chr8_1:22314103-22314122 Msa1185300:intron 35.0%
ACACAACACTGATAACTCAA+AGG + chr8_1:22314143-22314162 None:intergenic 35.0%
! CTTATTGTTTTCTCACCAAG+AGG - chr8_1:22314178-22314197 Msa1185300:intron 35.0%
AGATGCAATCACACAATTTG+AGG + chr8_1:22314268-22314287 None:intergenic 35.0%
TTAGAGTGTGTTTGGATTGA+GGG - chr8_1:22314587-22314606 Msa1185300:intron 35.0%
TTATTGTTGGTGTGACCTTA+GGG + chr8_1:22314832-22314851 None:intergenic 35.0%
TTTATTGTTGGTGTGACCTT+AGG + chr8_1:22314833-22314852 None:intergenic 35.0%
TAACTTGATGTTATGGTTGG+GGG + chr8_1:22314957-22314976 None:intergenic 35.0%
TATATAGGGTTGAAGTAGCA+CGG - chr8_1:22315000-22315019 Msa1185300:intron 35.0%
ACACCGCATTATATCTGTAA+TGG + chr8_1:22315344-22315363 None:intergenic 35.0%
! TTAATATGGTGGGGTAAGAT+GGG - chr8_1:22313224-22313243 Msa1185300:intron 35.0%
!! TCAGGTTGATTAATGAGGAA+AGG - chr8_1:22313248-22313267 Msa1185300:intron 35.0%
GTTGATTAATGAGGAAAGGT+AGG - chr8_1:22313252-22313271 Msa1185300:intron 35.0%
TCAAGGAAAAGGATTGGATT+TGG + chr8_1:22313322-22313341 None:intergenic 35.0%
TGCCTAGAAAAGGAAAAGAA+TGG + chr8_1:22313442-22313461 None:intergenic 35.0%
! AATCTGCTTCATTTTGTTGC+TGG - chr8_1:22313527-22313546 Msa1185300:intron 35.0%
!!! GTCCATTTGGTTTTATTGAG+TGG - chr8_1:22313781-22313800 Msa1185300:intron 35.0%
! TTTCATCCCTTTTCCTTACA+AGG - chr8_1:22313869-22313888 Msa1185300:intron 35.0%
! TGTGTTTTTCCTTCTTGGTT+AGG - chr8_1:22313899-22313918 Msa1185300:intron 35.0%
CAAAAAAGTCCTAACCAAGA+AGG + chr8_1:22313911-22313930 None:intergenic 35.0%
ACATTCTCAAAGAGGAGAAA+TGG - chr8_1:22314103-22314122 Msa1185300:intron 35.0%
ACACAACACTGATAACTCAA+AGG + chr8_1:22314143-22314162 None:intergenic 35.0%
! CTTATTGTTTTCTCACCAAG+AGG - chr8_1:22314178-22314197 Msa1185300:intron 35.0%
AGATGCAATCACACAATTTG+AGG + chr8_1:22314268-22314287 None:intergenic 35.0%
TTAGAGTGTGTTTGGATTGA+GGG - chr8_1:22314587-22314606 Msa1185300:intron 35.0%
TTATTGTTGGTGTGACCTTA+GGG + chr8_1:22314832-22314851 None:intergenic 35.0%
TTTATTGTTGGTGTGACCTT+AGG + chr8_1:22314833-22314852 None:intergenic 35.0%
TAACTTGATGTTATGGTTGG+GGG + chr8_1:22314957-22314976 None:intergenic 35.0%
TATATAGGGTTGAAGTAGCA+CGG - chr8_1:22315000-22315019 Msa1185300:intron 35.0%
ACACCGCATTATATCTGTAA+TGG + chr8_1:22315344-22315363 None:intergenic 35.0%
! CTTAATATGGTGGGGTAAGA+TGG - chr8_1:22313223-22313242 Msa1185300:intron 40.0%
! TAATATGGTGGGGTAAGATG+GGG - chr8_1:22313225-22313244 Msa1185300:intron 40.0%
TAAAGGGTTGTGCCTAGAAA+AGG + chr8_1:22313452-22313471 None:intergenic 40.0%
GTACGGATAGGAGGAATAAA+GGG + chr8_1:22313468-22313487 None:intergenic 40.0%
AAATGAACCAAGGTACGGAT+AGG + chr8_1:22313480-22313499 None:intergenic 40.0%
GAAGCAGATTTGCACCAAAT+TGG + chr8_1:22313517-22313536 None:intergenic 40.0%
! GGTGTTTAGACCCTTTTTCT+AGG - chr8_1:22313613-22313632 Msa1185300:intron 40.0%
GTATAGAGAACGCAACAAGT+AGG - chr8_1:22314074-22314093 Msa1185300:intron 40.0%
GGCAAGTAACATTCTCAAAG+AGG - chr8_1:22314095-22314114 Msa1185300:intron 40.0%
AATTCATAAAGCCTCCCTCT+TGG + chr8_1:22314196-22314215 None:intergenic 40.0%
!!! GAGGAGCCTGAAATTTTTTG+TGG - chr8_1:22314409-22314428 Msa1185300:CDS 40.0%
CTTAGAGTGTGTTTGGATTG+AGG - chr8_1:22314586-22314605 Msa1185300:intron 40.0%
TGTGTTTGGATTGAGGGTTT+AGG - chr8_1:22314593-22314612 Msa1185300:intron 40.0%
TTTGGATTGAGGGTTTAGGA+GGG - chr8_1:22314597-22314616 Msa1185300:intron 40.0%
TGATCATACGATATTGCAGG+AGG + chr8_1:22315261-22315280 None:intergenic 40.0%
! CTTAATATGGTGGGGTAAGA+TGG - chr8_1:22313223-22313242 Msa1185300:intron 40.0%
! TAATATGGTGGGGTAAGATG+GGG - chr8_1:22313225-22313244 Msa1185300:intron 40.0%
TAAAGGGTTGTGCCTAGAAA+AGG + chr8_1:22313452-22313471 None:intergenic 40.0%
GTACGGATAGGAGGAATAAA+GGG + chr8_1:22313468-22313487 None:intergenic 40.0%
AAATGAACCAAGGTACGGAT+AGG + chr8_1:22313480-22313499 None:intergenic 40.0%
GAAGCAGATTTGCACCAAAT+TGG + chr8_1:22313517-22313536 None:intergenic 40.0%
! GGTGTTTAGACCCTTTTTCT+AGG - chr8_1:22313613-22313632 Msa1185300:intron 40.0%
GTATAGAGAACGCAACAAGT+AGG - chr8_1:22314074-22314093 Msa1185300:intron 40.0%
GGCAAGTAACATTCTCAAAG+AGG - chr8_1:22314095-22314114 Msa1185300:intron 40.0%
AATTCATAAAGCCTCCCTCT+TGG + chr8_1:22314196-22314215 None:intergenic 40.0%
!!! GAGGAGCCTGAAATTTTTTG+TGG - chr8_1:22314409-22314428 Msa1185300:CDS 40.0%
CTTAGAGTGTGTTTGGATTG+AGG - chr8_1:22314586-22314605 Msa1185300:intron 40.0%
TGTGTTTGGATTGAGGGTTT+AGG - chr8_1:22314593-22314612 Msa1185300:intron 40.0%
TTTGGATTGAGGGTTTAGGA+GGG - chr8_1:22314597-22314616 Msa1185300:intron 40.0%
TGATCATACGATATTGCAGG+AGG + chr8_1:22315261-22315280 None:intergenic 40.0%
!! TGGGGTCAGGTTGATTAATG+AGG - chr8_1:22313243-22313262 Msa1185300:intron 45.0%
GGTACGGATAGGAGGAATAA+AGG + chr8_1:22313469-22313488 None:intergenic 45.0%
TATTCCTCCTATCCGTACCT+TGG - chr8_1:22313470-22313489 Msa1185300:intron 45.0%
ATCAGTGTTGTGTGATGCTG+AGG - chr8_1:22314150-22314169 Msa1185300:intron 45.0%
! TTGTTTTCTCACCAAGAGGG+AGG - chr8_1:22314182-22314201 Msa1185300:intron 45.0%
GTTTGGATTGAGGGTTTAGG+AGG - chr8_1:22314596-22314615 Msa1185300:intron 45.0%
TTGGATTGAGGGTTTAGGAG+GGG - chr8_1:22314598-22314617 Msa1185300:intron 45.0%
TTTGGATGAGGGTTTAGGAG+GGG + chr8_1:22314805-22314824 None:intergenic 45.0%
GTTTGGATGAGGGTTTAGGA+GGG + chr8_1:22314806-22314825 None:intergenic 45.0%
TGTTTGGATGAGGGTTTAGG+AGG + chr8_1:22314807-22314826 None:intergenic 45.0%
GTGTGTTTGGATGAGGGTTT+AGG + chr8_1:22314810-22314829 None:intergenic 45.0%
CTTAGGGTGTGTTTGGATGA+GGG + chr8_1:22314816-22314835 None:intergenic 45.0%
!! TGGGGTCAGGTTGATTAATG+AGG - chr8_1:22313243-22313262 Msa1185300:intron 45.0%
GGTACGGATAGGAGGAATAA+AGG + chr8_1:22313469-22313488 None:intergenic 45.0%
TATTCCTCCTATCCGTACCT+TGG - chr8_1:22313470-22313489 Msa1185300:intron 45.0%
ATCAGTGTTGTGTGATGCTG+AGG - chr8_1:22314150-22314169 Msa1185300:intron 45.0%
! TTGTTTTCTCACCAAGAGGG+AGG - chr8_1:22314182-22314201 Msa1185300:intron 45.0%
GTTTGGATTGAGGGTTTAGG+AGG - chr8_1:22314596-22314615 Msa1185300:intron 45.0%
TTGGATTGAGGGTTTAGGAG+GGG - chr8_1:22314598-22314617 Msa1185300:intron 45.0%
TTTGGATGAGGGTTTAGGAG+GGG + chr8_1:22314805-22314824 None:intergenic 45.0%
GTTTGGATGAGGGTTTAGGA+GGG + chr8_1:22314806-22314825 None:intergenic 45.0%
TGTTTGGATGAGGGTTTAGG+AGG + chr8_1:22314807-22314826 None:intergenic 45.0%
GTGTGTTTGGATGAGGGTTT+AGG + chr8_1:22314810-22314829 None:intergenic 45.0%
CTTAGGGTGTGTTTGGATGA+GGG + chr8_1:22314816-22314835 None:intergenic 45.0%
!!! TATTTTTCATTTTTAAATTA+CGG + chr8_1:22314766-22314785 None:intergenic 5.0%
!!! TATTTTTCATTTTTAAATTA+CGG + chr8_1:22314766-22314785 None:intergenic 5.0%
TGAACCAAGGTACGGATAGG+AGG + chr8_1:22313477-22313496 None:intergenic 50.0%
AGGGTTTAGGAGGGGAATGA+AGG - chr8_1:22314606-22314625 Msa1185300:intron 50.0%
GGGTTTAGGAGGGGAATGAA+GGG - chr8_1:22314607-22314626 Msa1185300:intron 50.0%
GGTTTAGGAGGGGAATGAAG+GGG - chr8_1:22314608-22314627 Msa1185300:intron 50.0%
ATGAGGGTTTAGGAGGGGAA+GGG + chr8_1:22314800-22314819 None:intergenic 50.0%
CCTTAGGGTGTGTTTGGATG+AGG + chr8_1:22314817-22314836 None:intergenic 50.0%
CCTCATCCAAACACACCCTA+AGG - chr8_1:22314814-22314833 Msa1185300:intron 50.0%
GTGTGACCTTAGGGTGTGTT+TGG + chr8_1:22314823-22314842 None:intergenic 50.0%
! GTTATGGTTGGGGGTGCAAA+GGG + chr8_1:22314948-22314967 None:intergenic 50.0%
! TGTTATGGTTGGGGGTGCAA+AGG + chr8_1:22314949-22314968 None:intergenic 50.0%
TGAACCAAGGTACGGATAGG+AGG + chr8_1:22313477-22313496 None:intergenic 50.0%
AGGGTTTAGGAGGGGAATGA+AGG - chr8_1:22314606-22314625 Msa1185300:intron 50.0%
GGGTTTAGGAGGGGAATGAA+GGG - chr8_1:22314607-22314626 Msa1185300:intron 50.0%
GGTTTAGGAGGGGAATGAAG+GGG - chr8_1:22314608-22314627 Msa1185300:intron 50.0%
ATGAGGGTTTAGGAGGGGAA+GGG + chr8_1:22314800-22314819 None:intergenic 50.0%
CCTTAGGGTGTGTTTGGATG+AGG + chr8_1:22314817-22314836 None:intergenic 50.0%
CCTCATCCAAACACACCCTA+AGG - chr8_1:22314814-22314833 Msa1185300:intron 50.0%
GTGTGACCTTAGGGTGTGTT+TGG + chr8_1:22314823-22314842 None:intergenic 50.0%
! GTTATGGTTGGGGGTGCAAA+GGG + chr8_1:22314948-22314967 None:intergenic 50.0%
! TGTTATGGTTGGGGGTGCAA+AGG + chr8_1:22314949-22314968 None:intergenic 50.0%
GGTTTAGGAGGGGAAGGGAT+GGG + chr8_1:22314795-22314814 None:intergenic 55.0%
GATGAGGGTTTAGGAGGGGA+AGG + chr8_1:22314801-22314820 None:intergenic 55.0%
GGTTTAGGAGGGGAAGGGAT+GGG + chr8_1:22314795-22314814 None:intergenic 55.0%
GATGAGGGTTTAGGAGGGGA+AGG + chr8_1:22314801-22314820 None:intergenic 55.0%
TGGTGGGGTAAGATGGGGTC+AGG - chr8_1:22313230-22313249 Msa1185300:intron 60.0%
TAGGAGGGGAAGGGATGGGA+GGG + chr8_1:22314791-22314810 None:intergenic 60.0%
TTAGGAGGGGAAGGGATGGG+AGG + chr8_1:22314792-22314811 None:intergenic 60.0%
GGGTTTAGGAGGGGAAGGGA+TGG + chr8_1:22314796-22314815 None:intergenic 60.0%
TGGTGGGGTAAGATGGGGTC+AGG - chr8_1:22313230-22313249 Msa1185300:intron 60.0%
TAGGAGGGGAAGGGATGGGA+GGG + chr8_1:22314791-22314810 None:intergenic 60.0%
TTAGGAGGGGAAGGGATGGG+AGG + chr8_1:22314792-22314811 None:intergenic 60.0%
GGGTTTAGGAGGGGAAGGGA+TGG + chr8_1:22314796-22314815 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 22313207 22315383 22313207 ID=Msa1185300;Name=Msa1185300
chr8_1 mRNA 22313207 22315383 22313207 ID=Msa1185300-mRNA-1;Parent=Msa1185300;Name=Msa1185300-mRNA-1;_AED=0.06;_eAED=0.06;_QI=53|0.5|0.66|0.66|0|0|3|0|82
chr8_1 exon 22313207 22313240 22313207 ID=Msa1185300-mRNA-1:exon:8248;Parent=Msa1185300-mRNA-1
chr8_1 exon 22314363 22314564 22314363 ID=Msa1185300-mRNA-1:exon:8247;Parent=Msa1185300-mRNA-1
chr8_1 exon 22315321 22315383 22315321 ID=Msa1185300-mRNA-1:exon:8246;Parent=Msa1185300-mRNA-1
chr8_1 five_prime_UTR 22315331 22315383 22315331 ID=Msa1185300-mRNA-1:five_prime_utr;Parent=Msa1185300-mRNA-1
chr8_1 CDS 22315321 22315330 22315321 ID=Msa1185300-mRNA-1:cds;Parent=Msa1185300-mRNA-1
chr8_1 CDS 22314363 22314564 22314363 ID=Msa1185300-mRNA-1:cds;Parent=Msa1185300-mRNA-1
chr8_1 CDS 22313207 22313240 22313207 ID=Msa1185300-mRNA-1:cds;Parent=Msa1185300-mRNA-1
Gene Sequence

>Msa1185300

ATGAGGAAAGCAGAGAAAAGAAAAGAAAAAATGGTGAGAGGAAAGACACAAATGAAGCGTATAGAGAACGCAACAAGTAGGCAAGTAACATTCTCAAAGAGGAGAAATGGTTTGTTGAAGAAAGCCTTTGAGTTATCAGTGTTGTGTGATGCTGAGGTTGCTCTTATTGTTTTCTCACCAAGAGGGAGGCTTTATGAATTTGCTAGCTCTAGATATAATGCGGTGTTCCAAAATGAAAATGTAACT
Protein sequence

>Msa1185300

MRKAEKRKEKMVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGRLYEFASSRYNAVFQNENVT