AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1185430

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1185430 MtrunA17_Chr8g0351091 98.355 608 10 0 74 681 5 612 0.0 1252
Msa1185430 MtrunA17_Chr7g0246371 81.848 617 104 3 65 681 56 664 0.0 1031
Msa1185430 MtrunA17_Chr3g0138381 56.044 637 258 5 61 679 31 663 0.0 721
Msa1185430 MtrunA17_Chr2g0290961 53.675 585 258 5 100 680 91 666 0.0 636
Msa1185430 MtrunA17_Chr8g0383241 57.025 484 198 2 201 681 15 491 0.0 590
Msa1185430 MtrunA17_Chr2g0283461 48.723 470 228 5 218 680 70 533 4.00e-166 487
Msa1185430 MtrunA17_Chr7g0235161 56.934 411 171 4 272 679 151 558 1.00e-156 464
Msa1185430 MtrunA17_Chr4g0061711 47.198 464 229 4 224 679 79 534 4.16e-153 454
Msa1185430 MtrunA17_Chr2g0308241 46.253 467 241 4 218 679 73 534 9.98e-152 450
Msa1185430 MtrunA17_Chr7g0260711 45.376 465 224 3 219 680 216 653 1.85e-147 443
Msa1185430 MtrunA17_Chr6g0456071 47.771 471 226 8 227 679 85 553 1.88e-146 437
Msa1185430 MtrunA17_Chr2g0277591 43.949 471 225 7 218 680 70 509 9.97e-138 413
Msa1185430 MtrunA17_Chr1g0184751 43.249 474 231 8 212 680 158 598 4.39e-133 404
Msa1185430 MtrunA17_Chr7g0218571 44.076 422 209 8 282 681 121 537 6.52e-122 374
Msa1185430 MtrunA17_Chr2g0319311 41.106 416 228 5 281 679 124 539 3.56e-113 351
Msa1185430 MtrunA17_Chr6g0454101 44.019 418 215 7 282 681 116 532 3.84e-110 343
Msa1185430 MtrunA17_Chr4g0076011 39.130 414 226 5 292 679 58 471 2.12e-103 323
Msa1185430 MtrunA17_Chr3g0097091 36.865 453 253 10 243 679 93 528 1.12e-92 297
Msa1185430 MtrunA17_Chr7g0245621 32.371 485 296 7 205 680 183 644 1.01e-77 261
Msa1185430 MtrunA17_Chr4g0076331 57.000 200 56 3 484 680 1 173 3.37e-67 218
Msa1185430 MtrunA17_Chr6g0451981 26.923 338 198 12 356 674 64 371 6.60e-24 104
Msa1185430 MtrunA17_Chr7g0259321 32.571 175 113 4 485 654 151 325 5.62e-22 98.2
Msa1185430 MtrunA17_Chr5g0414981 28.228 333 189 15 352 669 76 373 2.68e-21 97.4
Msa1185430 MtrunA17_Chr3g0127611 31.122 196 127 5 485 672 140 335 3.72e-21 95.5
Msa1185430 MtrunA17_Chr4g0066331 27.799 259 156 8 427 654 62 320 4.78e-21 95.1
Msa1185430 MtrunA17_Chr7g0269751 27.358 318 181 11 366 671 74 353 6.00e-21 95.1
Msa1185430 MtrunA17_Chr3g0141321 29.016 193 124 6 485 666 139 329 2.02e-19 90.1
Msa1185430 MtrunA17_Chr8g0373671 28.230 209 133 6 453 651 115 316 2.67e-18 87.0
Msa1185430 MtrunA17_Chr1g0154521 29.381 194 123 6 485 666 165 356 2.68e-17 84.3
Msa1185430 MtrunA17_Chr1g0196511 32.571 175 113 4 485 654 154 328 1.91e-16 81.6
Msa1185430 MtrunA17_Chr5g0403501 30.636 173 114 5 485 651 166 338 8.09e-16 79.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1185430 AT3G61130.1 69.048 672 179 5 29 681 12 673 0.0 956
Msa1185430 AT4G38270.2 55.049 614 251 5 88 681 68 676 0.0 714
Msa1185430 AT4G38270.1 54.854 618 250 5 88 681 68 680 0.0 712
Msa1185430 AT2G46480.3 59.434 530 210 3 153 681 15 540 0.0 663
Msa1185430 AT2G46480.4 59.434 530 210 3 153 681 28 553 0.0 662
Msa1185430 AT5G47780.1 62.256 461 170 1 220 680 159 615 0.0 635
Msa1185430 AT2G46480.2 56.038 530 203 4 153 681 15 515 0.0 608
Msa1185430 AT2G46480.1 56.038 530 203 4 153 681 28 528 0.0 607
Msa1185430 AT3G25140.1 56.161 422 176 5 264 679 139 557 7.76e-169 495
Msa1185430 AT1G18580.1 48.195 471 230 5 215 677 70 534 1.41e-160 473
Msa1185430 AT2G20810.1 48.077 468 230 6 221 680 74 536 4.93e-151 449
Msa1185430 AT3G02350.1 48.723 470 221 6 228 679 92 559 1.46e-148 443
Msa1185430 AT2G30575.1 43.777 466 233 3 219 681 171 610 3.59e-140 423
Msa1185430 AT1G06780.1 44.086 465 232 2 219 680 149 588 6.17e-139 419
Msa1185430 AT1G06780.2 44.086 465 232 2 219 680 162 601 1.51e-138 419
Msa1185430 AT3G01040.2 44.498 418 215 5 281 681 115 532 3.49e-117 361
Msa1185430 AT3G01040.3 44.498 418 215 5 281 681 115 532 3.49e-117 361
Msa1185430 AT5G15470.1 45.084 417 212 5 282 681 116 532 1.91e-116 359
Msa1185430 AT5G54690.1 39.252 428 236 6 276 679 105 532 1.12e-110 345
Msa1185430 AT3G01040.1 41.627 418 194 6 281 681 115 499 5.22e-102 321
Msa1185430 AT2G38650.2 34.783 483 282 9 205 680 162 618 4.39e-91 296
Msa1185430 AT2G38650.1 34.783 483 282 9 205 680 162 618 4.39e-91 296
Msa1185430 AT3G58790.2 37.931 406 224 8 296 679 7 406 3.61e-88 282
Msa1185430 AT3G58790.1 36.385 426 243 8 276 679 119 538 4.76e-87 283
Msa1185430 AT2G38650.3 35.476 389 219 8 205 587 162 524 2.83e-69 236
Msa1185430 AT3G06260.1 30.857 175 116 3 485 654 150 324 9.83e-22 97.8
Msa1185430 AT4G02130.3 26.543 324 193 10 361 673 57 346 9.87e-22 97.8
Msa1185430 AT4G02130.1 26.543 324 193 10 361 673 57 346 9.87e-22 97.8
Msa1185430 AT4G02130.2 26.543 324 193 10 361 673 57 346 9.87e-22 97.8
Msa1185430 AT3G62660.1 26.498 317 185 10 366 671 79 358 9.90e-22 97.8
Msa1185430 AT1G02720.1 27.273 319 187 10 366 673 77 361 9.99e-22 97.8
Msa1185430 AT1G02720.2 27.273 319 187 10 366 673 77 361 9.99e-22 97.8
Msa1185430 AT1G70090.1 28.814 236 154 7 445 671 134 364 3.69e-21 96.7
Msa1185430 AT1G70090.2 28.814 236 154 7 445 671 134 364 3.69e-21 96.7
Msa1185430 AT3G28340.1 29.958 237 149 9 451 675 126 357 6.04e-21 95.5
Msa1185430 AT1G19300.1 31.429 175 110 5 485 651 150 322 3.48e-19 90.1
Msa1185430 AT1G24170.1 24.290 317 199 9 366 671 81 367 1.16e-18 89.4
Msa1185430 AT3G50760.1 23.906 297 179 8 385 670 70 330 5.19e-16 80.5
Msa1185430 AT1G13250.1 26.235 324 196 11 361 674 51 341 1.19e-15 79.3

Find 164 sgRNAs with CRISPR-Local

Find 468 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCATTTCTTTCATCTTTC+TGG -0.037977 8_1:-22624279 Msa1185430:three_prime_UTR
GTTACTGATAAACTCAATTT+TGG 0.156608 8_1:-22625256 Msa1185430:CDS
TTGAGCATCGAGAGATATTT+TGG 0.169108 8_1:+22625031 None:intergenic
GCATTGACTCTGTTCCTTCT+AGG 0.177965 8_1:+22624208 None:intergenic
CCAGGACTAATGACATTCTA+TGG 0.236359 8_1:-22624548 Msa1185430:CDS
AGAAGGATTTGACAGGATTA+TGG 0.240515 8_1:-22624931 Msa1185430:CDS
TGTATCCAGCACAGATGATA+TGG 0.277199 8_1:-22627411 Msa1185430:CDS
TCGTGGCATGTCCTTGGTTT+AGG 0.294398 8_1:-22624503 Msa1185430:CDS
TTGCATGTACTGACTCTTAT+CGG 0.310075 8_1:-22623928 Msa1185430:three_prime_UTR
GTGACTCTGGTGGAAGAATC+AGG 0.311162 8_1:-22629697 Msa1185430:CDS
CGATGTCATCATCAAGAAAA+AGG 0.314739 8_1:+22624960 None:intergenic
TGACAAAGTATCGGCCTTAC+TGG 0.316170 8_1:-22624391 Msa1185430:CDS
TCTAATTTAGGATAAACTTC+TGG 0.323521 8_1:+22624989 None:intergenic
GATCTTCCTTCCTTCACCTT+TGG 0.325595 8_1:+22627147 None:intergenic
ATATCACAAATGGCAAAATA+TGG 0.336591 8_1:-22624717 Msa1185430:intron
ATTATGGGAAGTTGATCTTC+AGG 0.339063 8_1:-22624915 Msa1185430:CDS
GATCTTCAGGGGAAAGTAAA+TGG 0.342595 8_1:-22624902 Msa1185430:CDS
TTCTTAACCTTGTTTCAAAT+AGG 0.344791 8_1:+22624103 None:intergenic
CGCCCAACGGGACAACAAAC+TGG 0.345820 8_1:+22629596 None:intergenic
CTTCAGCACTGCCTTCTTCT+CGG 0.346475 8_1:+22630420 None:intergenic
ATCTGTTGAGTCAGCCGTAC+TGG 0.356409 8_1:-22626149 Msa1185430:CDS
AAAGAGAGTCAACATGCTTT+AGG 0.370001 8_1:-22625971 Msa1185430:CDS
ATTCTTCTGTTCGGTTTATG+AGG 0.374399 8_1:-22626081 Msa1185430:CDS
GTGAAGGAAGGAAGATCTTC+AGG 0.374727 8_1:-22627141 Msa1185430:intron
TATGAGGGACCAGATCATTA+TGG 0.376231 8_1:-22626065 Msa1185430:CDS
GAAGGATTTGACAGGATTAT+GGG 0.385355 8_1:-22624930 Msa1185430:CDS
TCTTGTGTAACATGTGTTGT+TGG 0.388574 8_1:+22627174 None:intergenic
TACTGGGTAAATACAGCATT+TGG 0.389876 8_1:-22626132 Msa1185430:CDS
GACAGGGTGCTTTGGAAGCT+GGG 0.390513 8_1:-22624581 Msa1185430:CDS
CCCGTGCCTTTGACAGAACT+TGG 0.391358 8_1:+22625804 None:intergenic
TAGTACACGTCAAGAAATAA+AGG 0.392316 8_1:-22625834 Msa1185430:CDS
TTCAGCACTGCCTTCTTCTC+GGG 0.395218 8_1:+22630421 None:intergenic
ATGCAAGTTACATGAATAGA+TGG 0.398454 8_1:-22624330 Msa1185430:exon
AGACAGCTGATGAGAAAGTT+AGG 0.401919 8_1:-22625730 Msa1185430:CDS
ACATGCCACGATTTATTTAG+TGG 0.403063 8_1:+22624515 None:intergenic
GATTCAAGCTGCCGCAATAC+AGG 0.410074 8_1:+22625136 None:intergenic
AATGCTTGTGGTTGGGCATA+TGG 0.411331 8_1:-22624791 Msa1185430:CDS
TCAAAGTTTCTTGCAATATG+TGG 0.412409 8_1:+22624818 None:intergenic
TATGCCCAACCACAAGCATT+TGG 0.412414 8_1:+22624794 None:intergenic
GGCCAGTTTGTTGTCCCGTT+GGG 0.412477 8_1:-22629598 Msa1185430:CDS
AGTTAAGATATTTGTCAAAT+CGG 0.415942 8_1:+22624849 None:intergenic
GTTCCCTAGGAGTGAGAACT+TGG 0.416886 8_1:-22625585 Msa1185430:CDS
ATGAAAGAAATGAGGGATGC+TGG 0.433664 8_1:+22624287 None:intergenic
GTGCAGAGGGTCTTACTCAC+TGG 0.437169 8_1:-22627050 Msa1185430:intron
GGGCCAGTTTGTTGTCCCGT+TGG 0.437293 8_1:-22629599 Msa1185430:CDS
AGACAGGGTGCTTTGGAAGC+TGG 0.437302 8_1:-22624582 Msa1185430:CDS
CAAAAGAAACCACATGTTCA+TGG 0.440335 8_1:+22625231 None:intergenic
AATTCCACTTGGTATGGTCT+TGG 0.447689 8_1:+22625667 None:intergenic
TGGGTTTCTATATTTCATAT+TGG 0.450004 8_1:+22625051 None:intergenic
TGGTCAGTCTTGAACCTAGA+AGG 0.460339 8_1:-22624222 Msa1185430:three_prime_UTR
GACTTCAAATGCTGCCTATG+AGG 0.462603 8_1:-22627324 Msa1185430:intron
AAAATGCTGATTCTTCTGTT+CGG 0.464420 8_1:-22626090 Msa1185430:CDS
TTAACATATTTAGTCCAGTA+AGG 0.464878 8_1:+22624377 None:intergenic
TAACTTGCATTTCTGCAGAT+AGG 0.469528 8_1:+22624343 None:intergenic
AGGTGGAAAACATGCTTTGA+AGG 0.470973 8_1:+22625280 None:intergenic
CCAAGTTCTGTCAAAGGCAC+GGG 0.472286 8_1:-22625804 Msa1185430:CDS
AATAAATCGTGGCATGTCCT+TGG 0.472321 8_1:-22624509 Msa1185430:CDS
AAAGAGTATTATTTCAAAGC+AGG 0.473099 8_1:-22625103 Msa1185430:CDS
AGAATGAAGACAGGGTGCTT+TGG 0.476034 8_1:-22624589 Msa1185430:CDS
GCATGGTGGCTGTGTGACTC+TGG 0.476405 8_1:-22629710 Msa1185430:CDS
ACGTCAAGAAATAAAGGCTA+TGG 0.478191 8_1:-22625828 Msa1185430:CDS
CTAAAATTGTCAAGACTCAA+AGG 0.478518 8_1:+22627386 None:intergenic
CACATTAGTCCAAACCTCAT+AGG 0.483893 8_1:+22627310 None:intergenic
TGCTGCTGAGTTGGTAAAGA+TGG 0.489018 8_1:-22626221 Msa1185430:CDS
TGATCCAAATGCTTGTGGTT+GGG 0.490330 8_1:-22624798 Msa1185430:CDS
TGTTGCAAGAGCTGCAGTCT+AGG 0.490652 8_1:-22625997 Msa1185430:CDS
TTCAGCTGTTGCAAATAGAC+AGG 0.491325 8_1:-22627691 Msa1185430:intron
CTGATTCAGATCTTCATCAC+AGG 0.491823 8_1:-22625937 Msa1185430:intron
TATTGGAAGCACTAGAAGAA+AGG 0.491924 8_1:+22625068 None:intergenic
GCACTAGAAGAAAGGGTGGT+TGG 0.493295 8_1:+22625076 None:intergenic
TAGTGCATAATGATAAAGAC+TGG 0.499652 8_1:+22625556 None:intergenic
AGGCCCCATATCATCTGTGC+TGG 0.501711 8_1:+22627406 None:intergenic
TCTGCGTCATGGAGAGTTGT+TGG 0.501808 8_1:-22627353 Msa1185430:CDS
CAGAATGCATCCCGAGAAGA+AGG 0.503387 8_1:-22630431 None:intergenic
CCCTTCGGACTTGTCGTGTA+GGG 0.504060 8_1:+22627019 None:intergenic
TATGACAGCAAGTTGGTCAC+TGG 0.506011 8_1:-22625773 Msa1185430:CDS
ATTGGAAGCACTAGAAGAAA+GGG 0.507070 8_1:+22625069 None:intergenic
ATACCCTAGCCATAATGATC+TGG 0.507931 8_1:+22626056 None:intergenic
TTCTCCAAGTTCTCACTCCT+AGG 0.508939 8_1:+22625581 None:intergenic
CCAGAAAGATGAAAGAAATG+AGG 0.515616 8_1:+22624279 None:intergenic
TTATGGGAAGTTGATCTTCA+GGG 0.517146 8_1:-22624914 Msa1185430:CDS
GTATCCAGCACAGATGATAT+GGG 0.517429 8_1:-22627410 Msa1185430:CDS
TTCTTCTGTTCGGTTTATGA+GGG 0.518856 8_1:-22626080 Msa1185430:CDS
TGATGACATCGTTGTTCAGA+AGG 0.518905 8_1:-22624948 Msa1185430:CDS
CTCTATCAATGATCGATCTA+CGG 0.519040 8_1:+22624469 None:intergenic
GTTGTTCAGAAGGATTTGAC+AGG 0.522397 8_1:-22624938 Msa1185430:CDS
ATCAATGATCGATCTACGGT+TGG 0.522553 8_1:+22624473 None:intergenic
TCACTGGCATATATCACAAA+TGG 0.525538 8_1:-22624727 Msa1185430:CDS
GCAATGAATTCCACTTGGTA+TGG 0.527610 8_1:+22625661 None:intergenic
GGAAAAGCGTGCTGCTGAGT+TGG 0.528593 8_1:-22626230 Msa1185430:CDS
CCATAGAATGTCATTAGTCC+TGG 0.529892 8_1:+22624548 None:intergenic
TGACTCTGGTGGAAGAATCA+GGG 0.533307 8_1:-22629696 Msa1185430:CDS
TTGATCCAAATGCTTGTGGT+TGG 0.535817 8_1:-22624799 Msa1185430:CDS
ACAAGAGTGATCACATGCAT+GGG 0.536897 8_1:-22629620 Msa1185430:CDS
TTCTGATCTGATGTTCAGAC+AGG 0.545504 8_1:-22624039 Msa1185430:three_prime_UTR
CATGAACGTATTTGATCTCA+AGG 0.549062 8_1:-22624768 Msa1185430:CDS
TAGAAGAAAGGGTGGTTGGA+TGG 0.549689 8_1:+22625080 None:intergenic
GCCAAGTTCTGTCAAAGGCA+CGG 0.552166 8_1:-22625805 Msa1185430:CDS
CTAGTGTCTTGCTAGAATGA+TGG 0.556286 8_1:-22624242 Msa1185430:three_prime_UTR
TCTGTTGAGTCAGCCGTACT+GGG 0.556493 8_1:-22626148 Msa1185430:CDS
CAGAAAGATGAAAGAAATGA+GGG 0.559476 8_1:+22624280 None:intergenic
CTGCCGCAATACAGGGCAGT+AGG 0.560064 8_1:+22625144 None:intergenic
CATCCTACTGCCCTGTATTG+CGG 0.562221 8_1:-22625147 Msa1185430:CDS
AACTTTGATCCAAATGCTTG+TGG 0.562703 8_1:-22624803 Msa1185430:CDS
ACCCTTCGGACTTGTCGTGT+AGG 0.562800 8_1:+22627018 None:intergenic
TGGTGGCTGTGTGACTCTGG+TGG 0.563945 8_1:-22629707 Msa1185430:CDS
GGACCAGATCATTATGGCTA+GGG 0.565156 8_1:-22626059 Msa1185430:CDS
CAGGACTAATGACATTCTAT+GGG 0.566407 8_1:-22624547 Msa1185430:CDS
GGGACCAGATCATTATGGCT+AGG 0.569661 8_1:-22626060 Msa1185430:CDS
GACAAGAGTGATCACATGCA+TGG 0.570062 8_1:-22629621 Msa1185430:CDS
AATCATCTACATTGTGAACA+TGG 0.570216 8_1:+22625185 None:intergenic
CAAGTTCTGTCAAAGGCACG+GGG 0.571586 8_1:-22625803 Msa1185430:CDS
CTGGAAGATAGAATCTAAGA+TGG 0.575970 8_1:+22625008 None:intergenic
AATGTGGAAAGGAATGATGT+TGG 0.577511 8_1:+22624168 None:intergenic
TGGGTAAATACAGCATTTGG+AGG 0.579641 8_1:-22626129 Msa1185430:CDS
GCTGAAGAGATTTGAATCTG+AGG 0.580674 8_1:-22630404 Msa1185430:intron
GCCAGATACTTGTACCGGCA+TGG 0.580692 8_1:-22629727 Msa1185430:intron
GACTCTTATCGGTAAAATCA+CGG 0.582340 8_1:-22623917 Msa1185430:three_prime_UTR
AATGCTGTATTTACCCAGTA+CGG 0.587071 8_1:+22626135 None:intergenic
CGTCAAGAAATAAAGGCTAT+GGG 0.590218 8_1:-22625827 Msa1185430:CDS
AAGCACATTCCTCAGTCAGT+TGG 0.593627 8_1:-22625693 Msa1185430:CDS
TATGGGAAGTTGATCTTCAG+GGG 0.594151 8_1:-22624913 Msa1185430:CDS
CTCAGCTGTTACAAATGCAA+AGG 0.595673 8_1:-22625495 Msa1185430:intron
AAGCAAGAATCAATGTGGAA+AGG 0.599134 8_1:+22624157 None:intergenic
ATTCAAGCTGCCGCAATACA+GGG 0.605492 8_1:+22625137 None:intergenic
CGATTGCCATGACAAAGTAT+CGG 0.606224 8_1:-22624400 Msa1185430:CDS
TCTCCAAGTTCTCACTCCTA+GGG 0.606744 8_1:+22625582 None:intergenic
GCCCTACACGACAAGTCCGA+AGG 0.608010 8_1:-22627020 Msa1185430:CDS
GATCAGAATATTGTACAATG+AGG 0.611184 8_1:+22624054 None:intergenic
AATTGAGTTTATCAGTAACA+AGG 0.613631 8_1:+22625260 None:intergenic
ATTCTCACCTATTTGAAACA+AGG 0.613661 8_1:-22624110 Msa1185430:three_prime_UTR
AAGCTGGGGACATTACCTCC+AGG 0.613770 8_1:-22624566 Msa1185430:CDS
GTCATGGCAATCGCTAGCCA+CGG 0.617762 8_1:+22624410 None:intergenic
GACTCTGGTGGAAGAATCAG+GGG 0.621691 8_1:-22629695 Msa1185430:CDS
TATGGGCCAAGTTCTGTCAA+AGG 0.623145 8_1:-22625810 Msa1185430:CDS
CCTCCGCCAGATACTTGTAC+CGG 0.623200 8_1:-22629732 Msa1185430:intron
ACAGGGTGCTTTGGAAGCTG+GGG 0.627413 8_1:-22624580 Msa1185430:CDS
GCAATTGTATGACAGCAAGT+TGG 0.629238 8_1:-22625780 Msa1185430:CDS
TCTTGGCAGCCAACTGACTG+AGG 0.635206 8_1:+22625684 None:intergenic
CCCTACACGACAAGTCCGAA+GGG 0.638020 8_1:-22627019 Msa1185430:intron
CACATCCACTAAATAAATCG+TGG 0.639212 8_1:-22624520 Msa1185430:CDS
ACGTATTTGATCTCAAGGAG+TGG 0.640381 8_1:-22624763 Msa1185430:CDS
GATAAGCAATGAATTCCACT+TGG 0.641239 8_1:+22625656 None:intergenic
GAGTCACACAGCCACCATGC+CGG 0.643342 8_1:+22629713 None:intergenic
GTGGAAAGGAATGATGTTGG+AGG 0.644209 8_1:+22624171 None:intergenic
AGTGCATAATGATAAAGACT+GGG 0.649951 8_1:+22625557 None:intergenic
TGAGTTTATCAGTAACAAGG+TGG 0.652327 8_1:+22625263 None:intergenic
GCAGCAGTTGTACACTACAA+TGG 0.656287 8_1:-22624443 Msa1185430:CDS
GTAAGGCCGATACTTTGTCA+TGG 0.657953 8_1:+22624394 None:intergenic
TAGAATGTCATTAGTCCTGG+AGG 0.659704 8_1:+22624551 None:intergenic
GGAGGTAGTAATCTATTGTG+AGG 0.664103 8_1:+22625627 None:intergenic
ATTCAAAGCAAGAATCAATG+TGG 0.665211 8_1:+22624152 None:intergenic
TATCCAGCACAGATGATATG+GGG 0.668316 8_1:-22627409 Msa1185430:CDS
GGAAGCACTAGAAGAAAGGG+TGG 0.674642 8_1:+22625072 None:intergenic
AACAGCTGAGTTCACAACAA+CGG 0.690951 8_1:+22625508 None:intergenic
CAAGAGTGATCACATGCATG+GGG 0.695276 8_1:-22629619 Msa1185430:CDS
AGATACTTGTACCGGCATGG+TGG 0.699931 8_1:-22629724 Msa1185430:CDS
TTGGACTATAACCTAAACCA+AGG 0.700433 8_1:+22624492 None:intergenic
ACAATGGTAATATGAAGCCG+TGG 0.711006 8_1:-22624427 Msa1185430:CDS
GCTGCCAAGACCATACCAAG+TGG 0.721158 8_1:-22625671 Msa1185430:CDS
AATGGTGCAGTTGAAACATG+TGG 0.724609 8_1:-22624884 Msa1185430:CDS
ACTCTGGTGGAAGAATCAGG+GGG 0.738859 8_1:-22629694 Msa1185430:CDS
CTCTGGTGGAAGAATCAGGG+GGG 0.744500 8_1:-22629693 Msa1185430:CDS
AAGTTCTGTCAAAGGCACGG+GGG 0.753594 8_1:-22625802 Msa1185430:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAATATATTGTCAAATTTA+AGG + chr8_1:22625549-22625568 None:intergenic 10.0%
!!! TTTATACTTATTTTAAATAC+AGG + chr8_1:22627082-22627101 None:intergenic 10.0%
!!! ATGTTTGATTTTTTAATTAA+AGG - chr8_1:22627139-22627158 Msa1185430:intron 10.0%
!!! TTTAAATTTTCTAAGATTTA+AGG + chr8_1:22627715-22627734 None:intergenic 10.0%
!!! AGGATAATCTTTAAAAATTA+AGG + chr8_1:22625529-22625548 None:intergenic 15.0%
!!! ATATTTTCTCAAATCATATA+TGG + chr8_1:22628987-22629006 None:intergenic 15.0%
!!! AAAAGGATTTTATCTAATTT+AGG + chr8_1:22629370-22629389 None:intergenic 15.0%
!! AAAGACAAGAAACAATATTT+GGG - chr8_1:22624058-22624077 Msa1185430:three_prime_UTR 20.0%
!! GTCAATAATTAGAAAACATA+AGG - chr8_1:22624154-22624173 Msa1185430:three_prime_UTR 20.0%
!! CATAAGTTTCACAATAATTT+GGG + chr8_1:22624821-22624840 None:intergenic 20.0%
!! ACATAAGTTTCACAATAATT+TGG + chr8_1:22624822-22624841 None:intergenic 20.0%
!! TTGTTGAATGACAATTAATT+TGG - chr8_1:22624952-22624971 Msa1185430:CDS 20.0%
!! AAATTGAAGTCTTAAGAAAA+AGG - chr8_1:22625207-22625226 Msa1185430:CDS 20.0%
!! AATTGAAGTCTTAAGAAAAA+GGG - chr8_1:22625208-22625227 Msa1185430:CDS 20.0%
!! GAAGTAAATCAAAGTATATA+TGG + chr8_1:22625471-22625490 None:intergenic 20.0%
!! CTAATTAAACAAAAGTCATT+TGG - chr8_1:22625490-22625509 Msa1185430:intron 20.0%
!!! AACAACATAAGTTGATATTA+CGG + chr8_1:22625842-22625861 None:intergenic 20.0%
!!! CTTTTGAAAAAGTTGATTTA+AGG + chr8_1:22626812-22626831 None:intergenic 20.0%
!!! TAAATCAACTTTTTCAAAAG+AGG - chr8_1:22626812-22626831 Msa1185430:intron 20.0%
!! ATCAAACATGAATTAACATT+TGG + chr8_1:22627128-22627147 None:intergenic 20.0%
!!! TTTATTTTTGACAACAACAA+AGG - chr8_1:22627452-22627471 Msa1185430:intron 20.0%
!! AAATATTTCAGAAAGTAAAC+AGG - chr8_1:22627740-22627759 Msa1185430:intron 20.0%
!! AATTATTCACTGTCTATAAA+AGG + chr8_1:22628923-22628942 None:intergenic 20.0%
!! AGTTAAGATATTTGTCAAAT+CGG + chr8_1:22629498-22629517 None:intergenic 20.0%
!! AAATCAGATTAAAAAAAGCT+AGG + chr8_1:22629734-22629753 None:intergenic 20.0%
! GAAAGACAAGAAACAATATT+TGG - chr8_1:22624057-22624076 Msa1185430:three_prime_UTR 25.0%
!! ATATTGTGTTTTCACTTCTT+GGG + chr8_1:22624112-22624131 None:intergenic 25.0%
!! AATATTGTGTTTTCACTTCT+TGG + chr8_1:22624113-22624132 None:intergenic 25.0%
! AATATGAGTTAGAAAGACTA+CGG - chr8_1:22624253-22624272 Msa1185430:three_prime_UTR 25.0%
!!! AAGCCCAATTATATTTTTTG+TGG - chr8_1:22624384-22624403 Msa1185430:CDS 25.0%
!!! AGCCCAATTATATTTTTTGT+GGG - chr8_1:22624385-22624404 Msa1185430:CDS 25.0%
! TTTGGAGACTTATTCAAAAA+TGG - chr8_1:22624554-22624573 Msa1185430:CDS 25.0%
! TAATAAGATCCTTCTTTGTT+AGG - chr8_1:22624848-22624867 Msa1185430:CDS 25.0%
!! ATTTTTCATGCAACAACTAT+GGG + chr8_1:22624874-22624893 None:intergenic 25.0%
!! TATTTTTCATGCAACAACTA+TGG + chr8_1:22624875-22624894 None:intergenic 25.0%
!! CTTCAATTTGAAAGTTTTTG+TGG + chr8_1:22625196-22625215 None:intergenic 25.0%
! GTAAATCAAAGTATATATGG+TGG + chr8_1:22625468-22625487 None:intergenic 25.0%
! TGATGTATTATGAAAACTTG+TGG - chr8_1:22625591-22625610 Msa1185430:CDS 25.0%
!!! AAATTTTGTTGTTGCTTGTT+GGG - chr8_1:22625726-22625745 Msa1185430:CDS 25.0%
!!! AGTACAAAGTGTTTTCAAAT+AGG - chr8_1:22626472-22626491 Msa1185430:intron 25.0%
!!! GTACAAAGTGTTTTCAAATA+GGG - chr8_1:22626473-22626492 Msa1185430:intron 25.0%
!!! TACAAAGTGTTTTCAAATAG+GGG - chr8_1:22626474-22626493 Msa1185430:intron 25.0%
!! GCATATTTATTAGTTTAAGC+CGG - chr8_1:22626590-22626609 Msa1185430:intron 25.0%
! TTGGCTATGTAACTAAATAA+TGG - chr8_1:22626695-22626714 Msa1185430:intron 25.0%
!!! ACTAAATAATGGATATCACT+TGG - chr8_1:22626706-22626725 Msa1185430:intron 25.0%
! AAACATGAATTAACATTTGG+AGG + chr8_1:22627125-22627144 None:intergenic 25.0%
!!! TAACTATTTTTTTGTGCAGA+GGG - chr8_1:22627281-22627300 Msa1185430:intron 25.0%
! AACAACAAAGGAAAAAGTAA+GGG - chr8_1:22627464-22627483 Msa1185430:intron 25.0%
! AAAATGTAAACATGAAACAC+AGG + chr8_1:22627490-22627509 None:intergenic 25.0%
! AATTGTAAAATCAAACAGTG+AGG + chr8_1:22627555-22627574 None:intergenic 25.0%
!!! ACATTTTTTATGAGAGAAGA+CGG + chr8_1:22627670-22627689 None:intergenic 25.0%
!!! TTTTCTAAGATTTAAGGAGA+CGG + chr8_1:22627709-22627728 None:intergenic 25.0%
! AAAAGCAATATCATTTGACA+TGG + chr8_1:22627777-22627796 None:intergenic 25.0%
!!! TAGAGCATTTTATTCTCTTT+TGG - chr8_1:22627859-22627878 Msa1185430:intron 25.0%
!! TTCTCATTCTTACTGAATTT+TGG - chr8_1:22627927-22627946 Msa1185430:intron 25.0%
!! ACTTTGAGTGTTTTTCATTT+TGG - chr8_1:22628031-22628050 Msa1185430:intron 25.0%
!! CTTTGAGTGTTTTTCATTTT+GGG - chr8_1:22628032-22628051 Msa1185430:intron 25.0%
! TGCAGCAATTAATAGAAAAA+AGG - chr8_1:22628089-22628108 Msa1185430:intron 25.0%
! TAAGCAGAAAATTCAGAAAA+AGG + chr8_1:22628468-22628487 None:intergenic 25.0%
!! ACTATTTTCAGATAATGTCT+TGG - chr8_1:22628807-22628826 Msa1185430:intron 25.0%
! ATAAAAGGAAATAATGCACA+CGG + chr8_1:22628908-22628927 None:intergenic 25.0%
! AATTGAGTTTATCAGTAACA+AGG + chr8_1:22629087-22629106 None:intergenic 25.0%
!! GTTACTGATAAACTCAATTT+TGG - chr8_1:22629088-22629107 Msa1185430:intron 25.0%
!! ACAATGTAGATGATTTTAAG+TGG - chr8_1:22629167-22629186 Msa1185430:intron 25.0%
!!! AAAGAGTATTATTTCAAAGC+AGG - chr8_1:22629241-22629260 Msa1185430:intron 25.0%
! TGGGTTTCTATATTTCATAT+TGG + chr8_1:22629296-22629315 None:intergenic 25.0%
!! TCTAATTTAGGATAAACTTC+TGG + chr8_1:22629358-22629377 None:intergenic 25.0%
! ATATCACAAATGGCAAAATA+TGG - chr8_1:22629627-22629646 Msa1185430:CDS 25.0%
! TTAACATATTTAGTCCAGTA+AGG + chr8_1:22629970-22629989 None:intergenic 25.0%
!! TTCTTAACCTTGTTTCAAAT+AGG + chr8_1:22630244-22630263 None:intergenic 25.0%
TGACTTTGTCTTCAAGATTA+TGG - chr8_1:22623965-22623984 Msa1185430:three_prime_UTR 30.0%
TTCACAACATCTCAATATCA+AGG - chr8_1:22624131-22624150 Msa1185430:three_prime_UTR 30.0%
TCACAACATCTCAATATCAA+GGG - chr8_1:22624132-22624151 Msa1185430:three_prime_UTR 30.0%
!!! GCCCAATTATATTTTTTGTG+GGG - chr8_1:22624386-22624405 Msa1185430:CDS 30.0%
GCCCCACAAAAAATATAATT+GGG + chr8_1:22624390-22624409 None:intergenic 30.0%
!! ATAATTTAACTTGTCCACAG+AGG - chr8_1:22624894-22624913 Msa1185430:CDS 30.0%
!! TAATTTAACTTGTCCACAGA+GGG - chr8_1:22624895-22624914 Msa1185430:CDS 30.0%
! GAATGACAATTAATTTGGAG+TGG - chr8_1:22624957-22624976 Msa1185430:CDS 30.0%
! TATGTTTTCACCCTGAATTT+CGG + chr8_1:22624986-22625005 None:intergenic 30.0%
AATTCAGGGTGAAAACATAA+AGG - chr8_1:22624987-22625006 Msa1185430:CDS 30.0%
ATTCAGGGTGAAAACATAAA+GGG - chr8_1:22624988-22625007 Msa1185430:CDS 30.0%
! CAGCCAATCTTTTTAATGAT+GGG + chr8_1:22625136-22625155 None:intergenic 30.0%
! ACAGCCAATCTTTTTAATGA+TGG + chr8_1:22625137-22625156 None:intergenic 30.0%
! CAATTTGAAAGTTTTTGTGG+TGG + chr8_1:22625193-22625212 None:intergenic 30.0%
TGATCTCTTAGTAGTTACTT+AGG - chr8_1:22625334-22625353 Msa1185430:intron 30.0%
GATCTCTTAGTAGTTACTTA+GGG - chr8_1:22625335-22625354 Msa1185430:intron 30.0%
ATCTCTTAGTAGTTACTTAG+GGG - chr8_1:22625336-22625355 Msa1185430:intron 30.0%
!!! CAAATTTTGTTGTTGCTTGT+TGG - chr8_1:22625725-22625744 Msa1185430:CDS 30.0%
!!! AATTTTGTTGTTGCTTGTTG+GGG - chr8_1:22625727-22625746 Msa1185430:CDS 30.0%
AGACTATCCAAATATCACAT+TGG + chr8_1:22625993-22626012 None:intergenic 30.0%
TAACTTTAATTGTTGCACCA+AGG + chr8_1:22626050-22626069 None:intergenic 30.0%
TACTATTTATGTGTGTCTAG+AGG - chr8_1:22626068-22626087 Msa1185430:CDS 30.0%
ATTCTATAAAGCTACTACCA+TGG + chr8_1:22626185-22626204 None:intergenic 30.0%
!! ATGGTAGTAGCTTTATAGAA+TGG - chr8_1:22626184-22626203 Msa1185430:CDS 30.0%
TCTACAACATAGAGAAGAAA+GGG + chr8_1:22626214-22626233 None:intergenic 30.0%
TTCTACAACATAGAGAAGAA+AGG + chr8_1:22626215-22626234 None:intergenic 30.0%
TCTCTATGTTGTAGAATTGA+TGG - chr8_1:22626219-22626238 Msa1185430:CDS 30.0%
GTTGAGTTTGAGAAATGAAA+TGG - chr8_1:22626281-22626300 Msa1185430:intron 30.0%
CTATAAGTGTGATCAAATAG+CGG - chr8_1:22626385-22626404 Msa1185430:intron 30.0%
CTAAAATTGTCAAGACTCAA+AGG + chr8_1:22626961-22626980 None:intergenic 30.0%
TGTTACACAAGAAAAACCAA+AGG - chr8_1:22627181-22627200 Msa1185430:CDS 30.0%
!!! CTAACTATTTTTTTGTGCAG+AGG - chr8_1:22627280-22627299 Msa1185430:intron 30.0%
TTCTTGTTAGAACTTGCATT+TGG - chr8_1:22627369-22627388 Msa1185430:CDS 30.0%
AACTATCACTAACATAAGGA+AGG + chr8_1:22627409-22627428 None:intergenic 30.0%
TGCAAACTATCACTAACATA+AGG + chr8_1:22627413-22627432 None:intergenic 30.0%
CAACAACAAAGGAAAAAGTA+AGG - chr8_1:22627463-22627482 Msa1185430:intron 30.0%
! TGCTAAAACAGTGTTTTCAT+TGG - chr8_1:22627613-22627632 Msa1185430:intron 30.0%
! GTTGGAGAATATTACGTTTT+AGG + chr8_1:22627894-22627913 None:intergenic 30.0%
!! AGTGTTTTTCATTTTGGGAA+TGG - chr8_1:22628037-22628056 Msa1185430:intron 30.0%
!! GTGTTTTTCATTTTGGGAAT+GGG - chr8_1:22628038-22628057 Msa1185430:intron 30.0%
GCAATTAATAGAAAAAAGGC+AGG - chr8_1:22628093-22628112 Msa1185430:intron 30.0%
!! AAAATGCTGATTCTTCTGTT+CGG - chr8_1:22628254-22628273 Msa1185430:intron 30.0%
TAGTACACGTCAAGAAATAA+AGG - chr8_1:22628510-22628529 Msa1185430:intron 30.0%
AGTGCATAATGATAAAGACT+GGG + chr8_1:22628790-22628809 None:intergenic 30.0%
TAGTGCATAATGATAAAGAC+TGG + chr8_1:22628791-22628810 None:intergenic 30.0%
!! ATAATTTGTTCCTTGACTGT+AGG - chr8_1:22628937-22628956 Msa1185430:intron 30.0%
ATATTCAAATCCTACAGTCA+AGG + chr8_1:22628950-22628969 None:intergenic 30.0%
AACATAAAGACAATGAGAGT+TGG + chr8_1:22629022-22629041 None:intergenic 30.0%
AATCATCTACATTGTGAACA+TGG + chr8_1:22629162-22629181 None:intergenic 30.0%
TCAAAGTTTCTTGCAATATG+TGG + chr8_1:22629529-22629548 None:intergenic 30.0%
!!! TCTGATTTTAGAATGAAGAC+AGG - chr8_1:22629746-22629765 Msa1185430:intron 30.0%
!!! CTGATTTTAGAATGAAGACA+GGG - chr8_1:22629747-22629766 Msa1185430:intron 30.0%
ATGCAAGTTACATGAATAGA+TGG - chr8_1:22630014-22630033 Msa1185430:intron 30.0%
CAGAAAGATGAAAGAAATGA+GGG + chr8_1:22630067-22630086 None:intergenic 30.0%
ATTCAAAGCAAGAATCAATG+TGG + chr8_1:22630195-22630214 None:intergenic 30.0%
! ATTCTCACCTATTTGAAACA+AGG - chr8_1:22630234-22630253 Msa1185430:intron 30.0%
! TTGTACAATGAGGAGTTTTA+TGG + chr8_1:22630283-22630302 None:intergenic 30.0%
GATCAGAATATTGTACAATG+AGG + chr8_1:22630293-22630312 None:intergenic 30.0%
TTATGGATCTAAGTTGCAAG+TGG - chr8_1:22623982-22624001 Msa1185430:three_prime_UTR 35.0%
TATGGATCTAAGTTGCAAGT+GGG - chr8_1:22623983-22624002 Msa1185430:three_prime_UTR 35.0%
ATTTGGGAAGCAAACAAACT+TGG - chr8_1:22624074-22624093 Msa1185430:three_prime_UTR 35.0%
! GTTTTCTAATTCTTGACCCT+TGG + chr8_1:22624199-22624218 None:intergenic 35.0%
ATAAGTAAACACAGCAGTGA+AGG - chr8_1:22624219-22624238 Msa1185430:three_prime_UTR 35.0%
GGCCCCACAAAAAATATAAT+TGG + chr8_1:22624391-22624410 None:intergenic 35.0%
AAAGGTTAGGACGTTGAAAA+GGG - chr8_1:22624445-22624464 Msa1185430:CDS 35.0%
AAGTCTCCAAAGTAAAGCTT+GGG + chr8_1:22624545-22624564 None:intergenic 35.0%
TAAGTCTCCAAAGTAAAGCT+TGG + chr8_1:22624546-22624565 None:intergenic 35.0%
TCAACCTCGAAGTTGAAAAA+CGG + chr8_1:22624688-22624707 None:intergenic 35.0%
GTTTCACAATAATTTGGGCT+TGG + chr8_1:22624816-22624835 None:intergenic 35.0%
CTGTCAATGAGTTTAGCAAT+AGG - chr8_1:22625040-22625059 Msa1185430:CDS 35.0%
! TTAGCAATAGGATTTTGTCG+CGG - chr8_1:22625052-22625071 Msa1185430:CDS 35.0%
TGGCAAACTTGCATATTTGT+TGG - chr8_1:22625080-22625099 Msa1185430:CDS 35.0%
CGACCCATCATTAAAAAGAT+TGG - chr8_1:22625130-22625149 Msa1185430:CDS 35.0%
GGTGAACATGATGAATACAT+GGG + chr8_1:22625282-22625301 None:intergenic 35.0%
ATTCTACACCTTCTCACAAT+AGG - chr8_1:22625440-22625459 Msa1185430:intron 35.0%
! AAAAGGGGGCTTTTCAATTT+GGG + chr8_1:22625642-22625661 None:intergenic 35.0%
! TAAAAGGGGGCTTTTCAATT+TGG + chr8_1:22625643-22625662 None:intergenic 35.0%
! ATTGAAAAGCCCCCTTTTAT+TGG - chr8_1:22625644-22625663 Msa1185430:CDS 35.0%
! ATCTAGAGCTGTCAACTTTA+GGG + chr8_1:22625697-22625716 None:intergenic 35.0%
! TATCTAGAGCTGTCAACTTT+AGG + chr8_1:22625698-22625717 None:intergenic 35.0%
TCAACTTATGTTGTTCCAAG+TGG - chr8_1:22625847-22625866 Msa1185430:intron 35.0%
CAACTTATGTTGTTCCAAGT+GGG - chr8_1:22625848-22625867 Msa1185430:intron 35.0%
! AGTTTGGTTCCTCTTAAGTA+AGG - chr8_1:22625880-22625899 Msa1185430:intron 35.0%
TTCCTCTTAAGTAAGGTCTT+GGG - chr8_1:22625887-22625906 Msa1185430:intron 35.0%
GTCAAGTGAACTCACTTAAA+AGG + chr8_1:22625949-22625968 None:intergenic 35.0%
! TTGACTTGACTGGTATTATC+TGG - chr8_1:22625964-22625983 Msa1185430:CDS 35.0%
TGACTTGACTGGTATTATCT+GGG - chr8_1:22625965-22625984 Msa1185430:CDS 35.0%
! TGTCTAGAATAAACCTACAG+TGG - chr8_1:22626141-22626160 Msa1185430:CDS 35.0%
! GTCTAGAATAAACCTACAGT+GGG - chr8_1:22626142-22626161 Msa1185430:CDS 35.0%
TGCATTTCATGTAAGTAGAC+CGG + chr8_1:22626612-22626631 None:intergenic 35.0%
!!! TAGCTTGTTTTGTGCGATAT+TGG - chr8_1:22626676-22626695 Msa1185430:intron 35.0%
GAAAAAATATGTCTGCGTCA+TGG - chr8_1:22626980-22626999 Msa1185430:intron 35.0%
TGGAGGCAATAAGACAATAA+TGG + chr8_1:22627108-22627127 None:intergenic 35.0%
TCTTGTGTAACATGTGTTGT+TGG + chr8_1:22627173-22627192 None:intergenic 35.0%
ACAAGAAAAACCAAAGGTGA+AGG - chr8_1:22627187-22627206 Msa1185430:intron 35.0%
! GAACTTGCATTTGGCTTATT+TGG - chr8_1:22627378-22627397 Msa1185430:CDS 35.0%
CAAAGTCGAAACACAATGTT+TGG + chr8_1:22628017-22628036 None:intergenic 35.0%
AATGCTGTATTTACCCAGTA+CGG + chr8_1:22628212-22628231 None:intergenic 35.0%
TACTGGGTAAATACAGCATT+TGG - chr8_1:22628212-22628231 Msa1185430:intron 35.0%
ATTCTTCTGTTCGGTTTATG+AGG - chr8_1:22628263-22628282 Msa1185430:intron 35.0%
TTCTTCTGTTCGGTTTATGA+GGG - chr8_1:22628264-22628283 Msa1185430:intron 35.0%
AAAGAGAGTCAACATGCTTT+AGG - chr8_1:22628373-22628392 Msa1185430:intron 35.0%
ACGTCAAGAAATAAAGGCTA+TGG - chr8_1:22628516-22628535 Msa1185430:intron 35.0%
CGTCAAGAAATAAAGGCTAT+GGG - chr8_1:22628517-22628536 Msa1185430:intron 35.0%
GATAAGCAATGAATTCCACT+TGG + chr8_1:22628691-22628710 None:intergenic 35.0%
AAATAATGCACACGGAACAT+CGG + chr8_1:22628900-22628919 None:intergenic 35.0%
TGAGTTTATCAGTAACAAGG+TGG + chr8_1:22629084-22629103 None:intergenic 35.0%
CAAAAGAAACCACATGTTCA+TGG + chr8_1:22629116-22629135 None:intergenic 35.0%
!! ATTGGAAGCACTAGAAGAAA+GGG + chr8_1:22629278-22629297 None:intergenic 35.0%
!! TATTGGAAGCACTAGAAGAA+AGG + chr8_1:22629279-22629298 None:intergenic 35.0%
!!! TGAGCATCGAGAGATATTTT+GGG + chr8_1:22629315-22629334 None:intergenic 35.0%
!!! TTGAGCATCGAGAGATATTT+TGG + chr8_1:22629316-22629335 None:intergenic 35.0%
CTGGAAGATAGAATCTAAGA+TGG + chr8_1:22629339-22629358 None:intergenic 35.0%
CGATGTCATCATCAAGAAAA+AGG + chr8_1:22629387-22629406 None:intergenic 35.0%
AGAAGGATTTGACAGGATTA+TGG - chr8_1:22629413-22629432 Msa1185430:intron 35.0%
GAAGGATTTGACAGGATTAT+GGG - chr8_1:22629414-22629433 Msa1185430:intron 35.0%
! ATTATGGGAAGTTGATCTTC+AGG - chr8_1:22629429-22629448 Msa1185430:intron 35.0%
! TTATGGGAAGTTGATCTTCA+GGG - chr8_1:22629430-22629449 Msa1185430:intron 35.0%
AACTTTGATCCAAATGCTTG+TGG - chr8_1:22629541-22629560 Msa1185430:intron 35.0%
CATGAACGTATTTGATCTCA+AGG - chr8_1:22629576-22629595 Msa1185430:CDS 35.0%
TGGAAAAAGAAGGATATCAC+TGG - chr8_1:22629601-22629620 Msa1185430:CDS 35.0%
TCACTGGCATATATCACAAA+TGG - chr8_1:22629617-22629636 Msa1185430:CDS 35.0%
CAGGACTAATGACATTCTAT+GGG - chr8_1:22629797-22629816 Msa1185430:intron 35.0%
CACATCCACTAAATAAATCG+TGG - chr8_1:22629824-22629843 Msa1185430:intron 35.0%
ACATGCCACGATTTATTTAG+TGG + chr8_1:22629832-22629851 None:intergenic 35.0%
TTGGACTATAACCTAAACCA+AGG + chr8_1:22629855-22629874 None:intergenic 35.0%
CTCTATCAATGATCGATCTA+CGG + chr8_1:22629878-22629897 None:intergenic 35.0%
! TAACTTGCATTTCTGCAGAT+AGG + chr8_1:22630004-22630023 None:intergenic 35.0%
CCAGAAAGATGAAAGAAATG+AGG + chr8_1:22630068-22630087 None:intergenic 35.0%
CCTCATTTCTTTCATCTTTC+TGG - chr8_1:22630065-22630084 Msa1185430:intron 35.0%
!! TCTTTCTGGCATAGCTTTTT+CGG - chr8_1:22630079-22630098 Msa1185430:intron 35.0%
AATGTGGAAAGGAATGATGT+TGG + chr8_1:22630179-22630198 None:intergenic 35.0%
AAGCAAGAATCAATGTGGAA+AGG + chr8_1:22630190-22630209 None:intergenic 35.0%
!! GAGGAGTTTTATGGTAAACA+AGG + chr8_1:22630274-22630293 None:intergenic 35.0%
!! TTGCATGTACTGACTCTTAT+CGG - chr8_1:22630416-22630435 Msa1185430:CDS 35.0%
GCTGAAGAGATTTGAATCTG+AGG - chr8_1:22623940-22623959 Msa1185430:three_prime_UTR 40.0%
ATGGATCTAAGTTGCAAGTG+GGG - chr8_1:22623984-22624003 Msa1185430:three_prime_UTR 40.0%
ACACAAACCTCTCAATACCA+AGG - chr8_1:22624179-22624198 Msa1185430:three_prime_UTR 40.0%
CACAAACCTCTCAATACCAA+GGG - chr8_1:22624180-22624199 Msa1185430:three_prime_UTR 40.0%
TTGGTATGGTCACAAAGGTT+AGG - chr8_1:22624432-22624451 Msa1185430:CDS 40.0%
CAAAGGTTAGGACGTTGAAA+AGG - chr8_1:22624444-22624463 Msa1185430:CDS 40.0%
AGAACCATCGATGATCTAGA+AGG - chr8_1:22624469-22624488 Msa1185430:CDS 40.0%
GTTGAACCCAAGCTTTACTT+TGG - chr8_1:22624536-22624555 Msa1185430:CDS 40.0%
!!! ATTGCCGTTTTTCAACTTCG+AGG - chr8_1:22624681-22624700 Msa1185430:intron 40.0%
ACAAGAGTGATCACATGCAT+GGG - chr8_1:22624724-22624743 Msa1185430:CDS 40.0%
!! CAAAAAGCAGAGGGTATTCT+CGG - chr8_1:22624775-22624794 Msa1185430:CDS 40.0%
ATTCTCGGTAAAGGAAGGAT+TGG - chr8_1:22624790-22624809 Msa1185430:CDS 40.0%
AACTATGGGCCTAACAAAGA+AGG + chr8_1:22624860-22624879 None:intergenic 40.0%
ATTGACAGCTGCTATTCCAT+TGG + chr8_1:22625028-22625047 None:intergenic 40.0%
CTCTTGTGAAATGCGCATTT+AGG + chr8_1:22625239-22625258 None:intergenic 40.0%
CTAAATGCGCATTTCACAAG+AGG - chr8_1:22625237-22625256 Msa1185430:CDS 40.0%
CATTTCACAAGAGGAGATGA+GGG - chr8_1:22625246-22625265 Msa1185430:CDS 40.0%
CGGTGAACATGATGAATACA+TGG + chr8_1:22625283-22625302 None:intergenic 40.0%
ACACCTGCGGATATTATCAA+AGG - chr8_1:22625413-22625432 Msa1185430:intron 40.0%
! TAGCCTTTGATAATATCCGC+AGG + chr8_1:22625419-22625438 None:intergenic 40.0%
! AAAGGGGGCTTTTCAATTTG+GGG + chr8_1:22625641-22625660 None:intergenic 40.0%
! ACTTTAGGGGGCCTAAATAT+GGG + chr8_1:22625683-22625702 None:intergenic 40.0%
! AACTTTAGGGGGCCTAAATA+TGG + chr8_1:22625684-22625703 None:intergenic 40.0%
! TCTAGAGCTGTCAACTTTAG+GGG + chr8_1:22625696-22625715 None:intergenic 40.0%
TTGTTCCAAGTGGGTAAGTA+AGG - chr8_1:22625857-22625876 Msa1185430:intron 40.0%
AAACTCCTTACTTACCCACT+TGG + chr8_1:22625865-22625884 None:intergenic 40.0%
AAGTGGGTAAGTAAGGAGTT+TGG - chr8_1:22625864-22625883 Msa1185430:intron 40.0%
GTTCCTCTTAAGTAAGGTCT+TGG - chr8_1:22625886-22625905 Msa1185430:intron 40.0%
CTGGGATCCAATGTGATATT+TGG - chr8_1:22625983-22626002 Msa1185430:CDS 40.0%
AGCATAAACACGCACAAGAA+TGG - chr8_1:22626015-22626034 Msa1185430:CDS 40.0%
ATTAGACTCTTGCAAGTGCA+AGG - chr8_1:22626111-22626130 Msa1185430:CDS 40.0%
! TTGTAGAATTGATGGTCGAG+AGG - chr8_1:22626227-22626246 Msa1185430:CDS 40.0%
ACAGTCTATTAGCGCAAATG+AGG + chr8_1:22626263-22626282 None:intergenic 40.0%
TTCAGCTGTTGCAAATAGAC+AGG - chr8_1:22626653-22626672 Msa1185430:intron 40.0%
! TTTTCAAAAGAGGCAAGCTC+AGG - chr8_1:22626822-22626841 Msa1185430:intron 40.0%
TGTATCCAGCACAGATGATA+TGG - chr8_1:22626933-22626952 Msa1185430:intron 40.0%
GTATCCAGCACAGATGATAT+GGG - chr8_1:22626934-22626953 Msa1185430:intron 40.0%
TATCCAGCACAGATGATATG+GGG - chr8_1:22626935-22626954 Msa1185430:intron 40.0%
CACATTAGTCCAAACCTCAT+AGG + chr8_1:22627037-22627056 None:intergenic 40.0%
GAAAAACCAAAGGTGAAGGA+AGG - chr8_1:22627191-22627210 Msa1185430:intron 40.0%
ACAAAATGATGCTCACCCTT+CGG + chr8_1:22627343-22627362 None:intergenic 40.0%
AGAACATCGTTGTGAATGCT+TGG + chr8_1:22627987-22628006 None:intergenic 40.0%
TGGGTAAATACAGCATTTGG+AGG - chr8_1:22628215-22628234 Msa1185430:intron 40.0%
TATGAGGGACCAGATCATTA+TGG - chr8_1:22628279-22628298 Msa1185430:intron 40.0%
ATACCCTAGCCATAATGATC+TGG + chr8_1:22628291-22628310 None:intergenic 40.0%
CTGATTCAGATCTTCATCAC+AGG - chr8_1:22628407-22628426 Msa1185430:intron 40.0%
CTTCATCACAGGTTCGAATT+AGG - chr8_1:22628418-22628437 Msa1185430:intron 40.0%
GCAATTGTATGACAGCAAGT+TGG - chr8_1:22628564-22628583 Msa1185430:intron 40.0%
AGACAGCTGATGAGAAAGTT+AGG - chr8_1:22628614-22628633 Msa1185430:intron 40.0%
AATTCCACTTGGTATGGTCT+TGG + chr8_1:22628680-22628699 None:intergenic 40.0%
GCAATGAATTCCACTTGGTA+TGG + chr8_1:22628686-22628705 None:intergenic 40.0%
GGAGGTAGTAATCTATTGTG+AGG + chr8_1:22628720-22628739 None:intergenic 40.0%
!!! ACTTCCTTTTTTCAGGAGGA+AGG + chr8_1:22628741-22628760 None:intergenic 40.0%
!!! CTAGGGAACTTCCTTTTTTC+AGG + chr8_1:22628748-22628767 None:intergenic 40.0%
CTGAAAAAAGGAAGTTCCCT+AGG - chr8_1:22628746-22628765 Msa1185430:intron 40.0%
AACAGCTGAGTTCACAACAA+CGG + chr8_1:22628839-22628858 None:intergenic 40.0%
CTCAGCTGTTACAAATGCAA+AGG - chr8_1:22628849-22628868 Msa1185430:intron 40.0%
GTTCTTGTGTTCAATGTTGC+AGG - chr8_1:22629039-22629058 Msa1185430:intron 40.0%
AGGTGGAAAACATGCTTTGA+AGG + chr8_1:22629067-22629086 None:intergenic 40.0%
!!! ATTTTGGAGCCATGAACATG+TGG - chr8_1:22629104-22629123 Msa1185430:intron 40.0%
!! ACATGGATTGTAGCTTTTCC+AGG + chr8_1:22629145-22629164 None:intergenic 40.0%
TGATGACATCGTTGTTCAGA+AGG - chr8_1:22629396-22629415 Msa1185430:intron 40.0%
GTTGTTCAGAAGGATTTGAC+AGG - chr8_1:22629406-22629425 Msa1185430:intron 40.0%
! TATGGGAAGTTGATCTTCAG+GGG - chr8_1:22629431-22629450 Msa1185430:intron 40.0%
GATCTTCAGGGGAAAGTAAA+TGG - chr8_1:22629442-22629461 Msa1185430:intron 40.0%
AATGGTGCAGTTGAAACATG+TGG - chr8_1:22629460-22629479 Msa1185430:intron 40.0%
TTGATCCAAATGCTTGTGGT+TGG - chr8_1:22629545-22629564 Msa1185430:intron 40.0%
TGATCCAAATGCTTGTGGTT+GGG - chr8_1:22629546-22629565 Msa1185430:intron 40.0%
ACGTATTTGATCTCAAGGAG+TGG - chr8_1:22629581-22629600 Msa1185430:CDS 40.0%
TCTCAAGGAGTGGAAAAAGA+AGG - chr8_1:22629591-22629610 Msa1185430:CDS 40.0%
TAGAATGTCATTAGTCCTGG+AGG + chr8_1:22629796-22629815 None:intergenic 40.0%
CCATAGAATGTCATTAGTCC+TGG + chr8_1:22629799-22629818 None:intergenic 40.0%
CCAGGACTAATGACATTCTA+TGG - chr8_1:22629796-22629815 Msa1185430:intron 40.0%
AATAAATCGTGGCATGTCCT+TGG - chr8_1:22629835-22629854 Msa1185430:intron 40.0%
ATCAATGATCGATCTACGGT+TGG + chr8_1:22629874-22629893 None:intergenic 40.0%
ACAATGGTAATATGAAGCCG+TGG - chr8_1:22629917-22629936 Msa1185430:intron 40.0%
CGATTGCCATGACAAAGTAT+CGG - chr8_1:22629944-22629963 Msa1185430:intron 40.0%
ATGAAAGAAATGAGGGATGC+TGG + chr8_1:22630060-22630079 None:intergenic 40.0%
CTAGTGTCTTGCTAGAATGA+TGG - chr8_1:22630102-22630121 Msa1185430:intron 40.0%
TTCTGATCTGATGTTCAGAC+AGG - chr8_1:22630305-22630324 Msa1185430:intron 40.0%
TGGATCTAAGTTGCAAGTGG+GGG - chr8_1:22623985-22624004 Msa1185430:three_prime_UTR 45.0%
AGATCAGAGCCAGGAAAAAG+TGG - chr8_1:22624017-22624036 Msa1185430:three_prime_UTR 45.0%
! TCTTGACCCTTGGTATTGAG+AGG + chr8_1:22624189-22624208 None:intergenic 45.0%
AGTAAACACAGCAGTGAAGG+TGG - chr8_1:22624222-22624241 Msa1185430:three_prime_UTR 45.0%
GAACTGACAGAAGCAGGTAA+TGG - chr8_1:22624308-22624327 Msa1185430:three_prime_UTR 45.0%
ACCATCGATGATCTAGAAGG+CGG - chr8_1:22624472-22624491 Msa1185430:CDS 45.0%
CTTGGGTTCAACAGTTCAAG+TGG + chr8_1:22624528-22624547 None:intergenic 45.0%
TGACTCTGGTGGAAGAATCA+GGG - chr8_1:22624648-22624667 Msa1185430:intron 45.0%
GACAAGAGTGATCACATGCA+TGG - chr8_1:22624723-22624742 Msa1185430:CDS 45.0%
CAAGAGTGATCACATGCATG+GGG - chr8_1:22624725-22624744 Msa1185430:CDS 45.0%
!! TGCTTTTTGTTTGCGCCCAA+CGG + chr8_1:22624764-22624783 None:intergenic 45.0%
! AGGGTATTCTCGGTAAAGGA+AGG - chr8_1:22624785-22624804 Msa1185430:CDS 45.0%
GCTAACTGCTTGCTTACCTT+TGG + chr8_1:22624925-22624944 None:intergenic 45.0%
GGACAAAAGATCACGTCCAA+TGG - chr8_1:22625009-22625028 Msa1185430:CDS 45.0%
! AATAGGATTTTGTCGCGGCA+TGG - chr8_1:22625057-22625076 Msa1185430:CDS 45.0%
!! TTTGTTGGCTTTGCAGTCGA+CGG - chr8_1:22625095-22625114 Msa1185430:CDS 45.0%
GCATTTCACAAGAGGAGATG+AGG - chr8_1:22625245-22625264 Msa1185430:CDS 45.0%
TCATGTTCACCGTGAAGACA+AGG - chr8_1:22625291-22625310 Msa1185430:intron 45.0%
ACCGTGAAGACAAGGTGAAA+TGG - chr8_1:22625299-22625318 Msa1185430:intron 45.0%
CCCATTTCACCTTGTCTTCA+CGG + chr8_1:22625303-22625322 None:intergenic 45.0%
CCGTGAAGACAAGGTGAAAT+GGG - chr8_1:22625300-22625319 Msa1185430:intron 45.0%
! ACTTAGGGGTGTGTGATAAG+AGG - chr8_1:22625350-22625369 Msa1185430:intron 45.0%
! ACCTACAGATGTGCTGGTAA+GGG + chr8_1:22625389-22625408 None:intergenic 45.0%
GTAAAGACCTACAGATGTGC+TGG + chr8_1:22625395-22625414 None:intergenic 45.0%
TCTGTAGGTCTTTACACCTG+CGG - chr8_1:22625400-22625419 Msa1185430:intron 45.0%
TTAGCGGGGGTCCAATAAAA+GGG + chr8_1:22625658-22625677 None:intergenic 45.0%
! CTTTAGGGGGCCTAAATATG+GGG + chr8_1:22625682-22625701 None:intergenic 45.0%
CTAGAGCTGTCAACTTTAGG+GGG + chr8_1:22625695-22625714 None:intergenic 45.0%
!! TTGTTGGGGTTTTGTGCTGT+TGG - chr8_1:22625741-22625760 Msa1185430:CDS 45.0%
TGCTGTTGGAACTTCTGTGA+TGG - chr8_1:22625755-22625774 Msa1185430:CDS 45.0%
GACCCAAGACCTTACTTAAG+AGG + chr8_1:22625892-22625911 None:intergenic 45.0%
! GTGAGTTCACTTGACTTGAC+TGG - chr8_1:22625954-22625973 Msa1185430:CDS 45.0%
AACACGCACAAGAATGGAAC+AGG - chr8_1:22626021-22626040 Msa1185430:CDS 45.0%
ACACGCACAAGAATGGAACA+GGG - chr8_1:22626022-22626041 Msa1185430:CDS 45.0%
CTCTTGCAAGTGCAAGGTAA+AGG - chr8_1:22626117-22626136 Msa1185430:CDS 45.0%
TCCATTCCTGGATTCTTCCA+TGG - chr8_1:22626165-22626184 Msa1185430:CDS 45.0%
ACCATGGAAGAATCCAGGAA+TGG + chr8_1:22626169-22626188 None:intergenic 45.0%
CTACTACCATGGAAGAATCC+AGG + chr8_1:22626174-22626193 None:intergenic 45.0%
TGCATGCCATTCTCTCCATT+TGG + chr8_1:22626781-22626800 None:intergenic 45.0%
GACTTCAAATGCTGCCTATG+AGG - chr8_1:22627020-22627039 Msa1185430:CDS 45.0%
CAAATGCTGCCTATGAGGTT+TGG - chr8_1:22627025-22627044 Msa1185430:CDS 45.0%
TGGACTAATGTGCTTCTGCA+CGG - chr8_1:22627045-22627064 Msa1185430:CDS 45.0%
GATCTTCCTTCCTTCACCTT+TGG + chr8_1:22627200-22627219 None:intergenic 45.0%
GTGAAGGAAGGAAGATCTTC+AGG - chr8_1:22627203-22627222 Msa1185430:intron 45.0%
AAGGAAGGAAGATCTTCAGG+TGG - chr8_1:22627206-22627225 Msa1185430:intron 45.0%
AAGACGGAAGACTATCTTGG+AGG + chr8_1:22627654-22627673 None:intergenic 45.0%
GAGAAGACGGAAGACTATCT+TGG + chr8_1:22627657-22627676 None:intergenic 45.0%
CGTTGTGAATGCTTGGCAAT+TGG + chr8_1:22627980-22627999 None:intergenic 45.0%
!! TGCTGCTGAGTTGGTAAAGA+TGG - chr8_1:22628123-22628142 Msa1185430:intron 45.0%
GGACCAGATCATTATGGCTA+GGG - chr8_1:22628285-22628304 Msa1185430:intron 45.0%
TATGGGCCAAGTTCTGTCAA+AGG - chr8_1:22628534-22628553 Msa1185430:intron 45.0%
!! TATGACAGCAAGTTGGTCAC+TGG - chr8_1:22628571-22628590 Msa1185430:intron 45.0%
AAGCACATTCCTCAGTCAGT+TGG - chr8_1:22628651-22628670 Msa1185430:intron 45.0%
ACCTCCTTCCTCCTGAAAAA+AGG - chr8_1:22628734-22628753 Msa1185430:intron 45.0%
!!! TCCTTTTTTCAGGAGGAAGG+AGG + chr8_1:22628738-22628757 None:intergenic 45.0%
!!! GGGAACTTCCTTTTTTCAGG+AGG + chr8_1:22628745-22628764 None:intergenic 45.0%
TCTCCAAGTTCTCACTCCTA+GGG + chr8_1:22628765-22628784 None:intergenic 45.0%
TTCTCCAAGTTCTCACTCCT+AGG + chr8_1:22628766-22628785 None:intergenic 45.0%
! TGGTTTCTTTTGAACCCTCC+TGG - chr8_1:22629124-22629143 Msa1185430:intron 45.0%
! GGATTGTAGCTTTTCCAGGA+GGG + chr8_1:22629141-22629160 None:intergenic 45.0%
! TGGATTGTAGCTTTTCCAGG+AGG + chr8_1:22629142-22629161 None:intergenic 45.0%
ATTCAAGCTGCCGCAATACA+GGG + chr8_1:22629210-22629229 None:intergenic 45.0%
TAGAAGAAAGGGTGGTTGGA+TGG + chr8_1:22629267-22629286 None:intergenic 45.0%
TATGCCCAACCACAAGCATT+TGG + chr8_1:22629553-22629572 None:intergenic 45.0%
AATGCTTGTGGTTGGGCATA+TGG - chr8_1:22629553-22629572 Msa1185430:intron 45.0%
! AGAATGAAGACAGGGTGCTT+TGG - chr8_1:22629755-22629774 Msa1185430:intron 45.0%
GCAGCAGTTGTACACTACAA+TGG - chr8_1:22629901-22629920 Msa1185430:intron 45.0%
GTAAGGCCGATACTTTGTCA+TGG + chr8_1:22629953-22629972 None:intergenic 45.0%
!! TGACAAAGTATCGGCCTTAC+TGG - chr8_1:22629953-22629972 Msa1185430:intron 45.0%
TGGTCAGTCTTGAACCTAGA+AGG - chr8_1:22630122-22630141 Msa1185430:intron 45.0%
!! GCATTGACTCTGTTCCTTCT+AGG + chr8_1:22630139-22630158 None:intergenic 45.0%
GTGGAAAGGAATGATGTTGG+AGG + chr8_1:22630176-22630195 None:intergenic 45.0%
!! AAAAAATTAAATGTTAAATA+TGG + chr8_1:22626864-22626883 None:intergenic 5.0%
!!! TCTAATTTATATTATATTTT+AGG - chr8_1:22626897-22626916 Msa1185430:intron 5.0%
TTCAGCACTGCCTTCTTCTC+GGG + chr8_1:22623926-22623945 None:intergenic 50.0%
CTTCAGCACTGCCTTCTTCT+CGG + chr8_1:22623927-22623946 None:intergenic 50.0%
CGAAGTTCAAGATCAGAGCC+AGG - chr8_1:22624008-22624027 Msa1185430:three_prime_UTR 50.0%
TCAGAGCCAGGAAAAAGTGG+TGG - chr8_1:22624020-22624039 Msa1185430:three_prime_UTR 50.0%
CAGAGCCAGGAAAAAGTGGT+GGG - chr8_1:22624021-22624040 Msa1185430:three_prime_UTR 50.0%
AGAGCCAGGAAAAAGTGGTG+GGG - chr8_1:22624022-22624041 Msa1185430:three_prime_UTR 50.0%
AAACACAGCAGTGAAGGTGG+TGG - chr8_1:22624225-22624244 Msa1185430:three_prime_UTR 50.0%
GAGAAGGAACTGACAGAAGC+AGG - chr8_1:22624302-22624321 Msa1185430:three_prime_UTR 50.0%
!! GAAGCAGGTAATGGAGCGAA+AGG - chr8_1:22624317-22624336 Msa1185430:exon 50.0%
!! GGCCTAGTAGAAGCATCCAA+GGG - chr8_1:22624407-22624426 Msa1185430:CDS 50.0%
TGCCCTTGGATGCTTCTACT+AGG + chr8_1:22624412-22624431 None:intergenic 50.0%
!! GTAGAAGCATCCAAGGGCAT+TGG - chr8_1:22624413-22624432 Msa1185430:CDS 50.0%
!! AGCATCCAAGGGCATTGGTA+TGG - chr8_1:22624418-22624437 Msa1185430:CDS 50.0%
TGTGACCATACCAATGCCCT+TGG + chr8_1:22624426-22624445 None:intergenic 50.0%
!! GGGCATTGGTATGGTCACAA+AGG - chr8_1:22624427-22624446 Msa1185430:CDS 50.0%
CCATCGATGATCTAGAAGGC+GGG - chr8_1:22624473-22624492 Msa1185430:CDS 50.0%
ACAGTGCATCTGTCCCATTC+AGG + chr8_1:22624500-22624519 None:intergenic 50.0%
ATGCCGGTACAAGTATCTGG+CGG + chr8_1:22624618-22624637 None:intergenic 50.0%
ACCATGCCGGTACAAGTATC+TGG + chr8_1:22624621-22624640 None:intergenic 50.0%
! AGATACTTGTACCGGCATGG+TGG - chr8_1:22624620-22624639 Msa1185430:intron 50.0%
GTGACTCTGGTGGAAGAATC+AGG - chr8_1:22624647-22624666 Msa1185430:intron 50.0%
GACTCTGGTGGAAGAATCAG+GGG - chr8_1:22624649-22624668 Msa1185430:intron 50.0%
ACTCTGGTGGAAGAATCAGG+GGG - chr8_1:22624650-22624669 Msa1185430:intron 50.0%
!! GCTTTTTGTTTGCGCCCAAC+GGG + chr8_1:22624763-22624782 None:intergenic 50.0%
TGGGCGCAAACAAAAAGCAG+AGG - chr8_1:22624765-22624784 Msa1185430:CDS 50.0%
GGGCGCAAACAAAAAGCAGA+GGG - chr8_1:22624766-22624785 Msa1185430:CDS 50.0%
!! GCAGAGGGTATTCTCGGTAA+AGG - chr8_1:22624781-22624800 Msa1185430:CDS 50.0%
! TACCTTTGGTGTACCCTCTG+TGG + chr8_1:22624911-22624930 None:intergenic 50.0%
TGGAGTGGAGACCGAAATTC+AGG - chr8_1:22624972-22624991 Msa1185430:CDS 50.0%
GGAGTGGAGACCGAAATTCA+GGG - chr8_1:22624973-22624992 Msa1185430:CDS 50.0%
!! TTGTTGGCTTTGCAGTCGAC+GGG - chr8_1:22625096-22625115 Msa1185430:CDS 50.0%
GGCAGCTTAATGTCTCTCAG+AGG + chr8_1:22625172-22625191 None:intergenic 50.0%
ACAAGAGGAGATGAGGGCTT+TGG - chr8_1:22625252-22625271 Msa1185430:CDS 50.0%
TCCCTTACCAGCACATCTGT+AGG - chr8_1:22625385-22625404 Msa1185430:intron 50.0%
! GACCTACAGATGTGCTGGTA+AGG + chr8_1:22625390-22625409 None:intergenic 50.0%
TAGCGGGGGTCCAATAAAAG+GGG + chr8_1:22625657-22625676 None:intergenic 50.0%
CTTAGCGGGGGTCCAATAAA+AGG + chr8_1:22625659-22625678 None:intergenic 50.0%
CTAAATATGGGGCTTAGCGG+GGG + chr8_1:22625671-22625690 None:intergenic 50.0%
CCTAAATATGGGGCTTAGCG+GGG + chr8_1:22625672-22625691 None:intergenic 50.0%
GCCTAAATATGGGGCTTAGC+GGG + chr8_1:22625673-22625692 None:intergenic 50.0%
GGCCTAAATATGGGGCTTAG+CGG + chr8_1:22625674-22625693 None:intergenic 50.0%
AAGAATGGAACAGGGAGCCT+TGG - chr8_1:22626030-22626049 Msa1185430:CDS 50.0%
CATTCTCTCCATTTGGCAGC+TGG + chr8_1:22626774-22626793 None:intergenic 50.0%
CAGCTGCCAAATGGAGAGAA+TGG - chr8_1:22626772-22626791 Msa1185430:intron 50.0%
TCTGCGTCATGGAGAGTTGT+TGG - chr8_1:22626991-22627010 Msa1185430:intron 50.0%
ATCTGTTGAGTCAGCCGTAC+TGG - chr8_1:22628195-22628214 Msa1185430:intron 50.0%
TCTGTTGAGTCAGCCGTACT+GGG - chr8_1:22628196-22628215 Msa1185430:intron 50.0%
GGGACCAGATCATTATGGCT+AGG - chr8_1:22628284-22628303 Msa1185430:intron 50.0%
TGTTGCAAGAGCTGCAGTCT+AGG - chr8_1:22628347-22628366 Msa1185430:intron 50.0%
GCCAAGTTCTGTCAAAGGCA+CGG - chr8_1:22628539-22628558 Msa1185430:intron 50.0%
! CCAAGTTCTGTCAAAGGCAC+GGG - chr8_1:22628540-22628559 Msa1185430:intron 50.0%
! CAAGTTCTGTCAAAGGCACG+GGG - chr8_1:22628541-22628560 Msa1185430:intron 50.0%
! AAGTTCTGTCAAAGGCACGG+GGG - chr8_1:22628542-22628561 Msa1185430:intron 50.0%
GTTCCCTAGGAGTGAGAACT+TGG - chr8_1:22628759-22628778 Msa1185430:intron 50.0%
CATCCTACTGCCCTGTATTG+CGG - chr8_1:22629197-22629216 Msa1185430:intron 50.0%
GATTCAAGCTGCCGCAATAC+AGG + chr8_1:22629211-22629230 None:intergenic 50.0%
GCACTAGAAGAAAGGGTGGT+TGG + chr8_1:22629271-22629290 None:intergenic 50.0%
!! GGAAGCACTAGAAGAAAGGG+TGG + chr8_1:22629275-22629294 None:intergenic 50.0%
TCGTGGCATGTCCTTGGTTT+AGG - chr8_1:22629841-22629860 Msa1185430:intron 50.0%
GAGCCAGGAAAAAGTGGTGG+GGG - chr8_1:22624023-22624042 Msa1185430:three_prime_UTR 55.0%
! AGCCAGGAAAAAGTGGTGGG+GGG - chr8_1:22624024-22624043 Msa1185430:three_prime_UTR 55.0%
!!! TACCCCCCACCACTTTTTCC+TGG + chr8_1:22624029-22624048 None:intergenic 55.0%
CCTTCTCTCTGTCTCTCCTG+TGG + chr8_1:22624289-22624308 None:intergenic 55.0%
CCACAGGAGAGACAGAGAGA+AGG - chr8_1:22624286-22624305 Msa1185430:three_prime_UTR 55.0%
!! TGGAGCGAAAGGTGTTGCCA+TGG - chr8_1:22624328-22624347 Msa1185430:exon 55.0%
!! GGAGCGAAAGGTGTTGCCAT+GGG - chr8_1:22624329-22624348 Msa1185430:exon 55.0%
TGTTGCCATGGGTCGTGCAA+TGG - chr8_1:22624340-22624359 Msa1185430:CDS 55.0%
TTCCACCATTGCACGACCCA+TGG + chr8_1:22624348-22624367 None:intergenic 55.0%
!! GGGCCTAGTAGAAGCATCCA+AGG - chr8_1:22624406-22624425 Msa1185430:CDS 55.0%
CCCGCCTTCTAGATCATCGA+TGG + chr8_1:22624476-22624495 None:intergenic 55.0%
TCTAGAAGGCGGGTCCTGAA+TGG - chr8_1:22624483-22624502 Msa1185430:CDS 55.0%
CTAGAAGGCGGGTCCTGAAT+GGG - chr8_1:22624484-22624503 Msa1185430:CDS 55.0%
CCTCCGCCAGATACTTGTAC+CGG - chr8_1:22624612-22624631 Msa1185430:intron 55.0%
! GCCAGATACTTGTACCGGCA+TGG - chr8_1:22624617-22624636 Msa1185430:intron 55.0%
CTCTGGTGGAAGAATCAGGG+GGG - chr8_1:22624651-22624670 Msa1185430:intron 55.0%
!! GGCCAGTTTGTTGTCCCGTT+GGG - chr8_1:22624746-22624765 Msa1185430:CDS 55.0%
! GTCCACAGAGGGTACACCAA+AGG - chr8_1:22624906-22624925 Msa1185430:CDS 55.0%
! AGGATTTTGTCGCGGCATGG+TGG - chr8_1:22625060-22625079 Msa1185430:CDS 55.0%
! TGGTGGCGCCTATTGTGAGA+AGG + chr8_1:22625451-22625470 None:intergenic 55.0%
AGCGGGGGTCCAATAAAAGG+GGG + chr8_1:22625656-22625675 None:intergenic 55.0%
CCCCGCTAAGCCCCATATTT+AGG - chr8_1:22625669-22625688 Msa1185430:CDS 55.0%
ACCTACAGTGGGTCCATTCC+TGG - chr8_1:22626153-22626172 Msa1185430:CDS 55.0%
TCCAGGAATGGACCCACTGT+AGG + chr8_1:22626157-22626176 None:intergenic 55.0%
AGGCCCCATATCATCTGTGC+TGG + chr8_1:22626941-22626960 None:intergenic 55.0%
GTGCAGAGGGTCTTACTCAC+TGG - chr8_1:22627294-22627313 Msa1185430:intron 55.0%
CCCTTCGGACTTGTCGTGTA+GGG + chr8_1:22627328-22627347 None:intergenic 55.0%
CCCTACACGACAAGTCCGAA+GGG - chr8_1:22627325-22627344 Msa1185430:CDS 55.0%
ACCCTTCGGACTTGTCGTGT+AGG + chr8_1:22627329-22627348 None:intergenic 55.0%
! GGAAAAGCGTGCTGCTGAGT+TGG - chr8_1:22628114-22628133 Msa1185430:intron 55.0%
CCCGTGCCTTTGACAGAACT+TGG + chr8_1:22628543-22628562 None:intergenic 55.0%
TCTTGGCAGCCAACTGACTG+AGG + chr8_1:22628663-22628682 None:intergenic 55.0%
GCTGCCAAGACCATACCAAG+TGG - chr8_1:22628673-22628692 Msa1185430:intron 55.0%
!! AGACAGGGTGCTTTGGAAGC+TGG - chr8_1:22629762-22629781 Msa1185430:intron 55.0%
!! GACAGGGTGCTTTGGAAGCT+GGG - chr8_1:22629763-22629782 Msa1185430:intron 55.0%
!! ACAGGGTGCTTTGGAAGCTG+GGG - chr8_1:22629764-22629783 Msa1185430:intron 55.0%
AAGCTGGGGACATTACCTCC+AGG - chr8_1:22629778-22629797 Msa1185430:intron 55.0%
GTCATGGCAATCGCTAGCCA+CGG + chr8_1:22629937-22629956 None:intergenic 55.0%
! CTACGGTCGACTCTAGCCAC+AGG - chr8_1:22624270-22624289 Msa1185430:three_prime_UTR 60.0%
TGCCATGGGTCGTGCAATGG+TGG - chr8_1:22624343-22624362 Msa1185430:CDS 60.0%
CCGGTACAAGTATCTGGCGG+AGG + chr8_1:22624615-22624634 None:intergenic 60.0%
GAGTCACACAGCCACCATGC+CGG + chr8_1:22624634-22624653 None:intergenic 60.0%
GCATGGTGGCTGTGTGACTC+TGG - chr8_1:22624634-22624653 Msa1185430:intron 60.0%
TGGTGGCTGTGTGACTCTGG+TGG - chr8_1:22624637-22624656 Msa1185430:intron 60.0%
GGTGGAAGAATCAGGGGGGT+TGG - chr8_1:22624655-22624674 Msa1185430:intron 60.0%
!! GGGCCAGTTTGTTGTCCCGT+TGG - chr8_1:22624745-22624764 Msa1185430:CDS 60.0%
CGCCCAACGGGACAACAAAC+TGG + chr8_1:22624751-22624770 None:intergenic 60.0%
GACTGCAGCCAGCTGCCAAA+TGG - chr8_1:22626763-22626782 Msa1185430:intron 60.0%
GCCCTACACGACAAGTCCGA+AGG - chr8_1:22627324-22627343 Msa1185430:intron 60.0%
CTGCCGCAATACAGGGCAGT+AGG + chr8_1:22629203-22629222 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 22623917 22630449 22623917 ID=Msa1185430;Name=Msa1185430
chr8_1 mRNA 22623917 22630449 22623917 ID=Msa1185430-mRNA-1;Parent=Msa1185430;Name=Msa1185430-mRNA-1;_AED=0.16;_eAED=0.20;_QI=0|0.66|0.8|1|1|1|10|417|681
chr8_1 exon 22623917 22624609 22623917 ID=Msa1185430-mRNA-1:exon:8349;Parent=Msa1185430-mRNA-1
chr8_1 exon 22624718 22625305 22624718 ID=Msa1185430-mRNA-1:exon:8348;Parent=Msa1185430-mRNA-1
chr8_1 exon 22625496 22625853 22625496 ID=Msa1185430-mRNA-1:exon:8347;Parent=Msa1185430-mRNA-1
chr8_1 exon 22625938 22626272 22625938 ID=Msa1185430-mRNA-1:exon:8346;Parent=Msa1185430-mRNA-1
chr8_1 exon 22627020 22627066 22627020 ID=Msa1185430-mRNA-1:exon:8345;Parent=Msa1185430-mRNA-1
chr8_1 exon 22627142 22627205 22627142 ID=Msa1185430-mRNA-1:exon:8344;Parent=Msa1185430-mRNA-1
chr8_1 exon 22627325 22627447 22627325 ID=Msa1185430-mRNA-1:exon:8343;Parent=Msa1185430-mRNA-1
chr8_1 exon 22627692 22627726 22627692 ID=Msa1185430-mRNA-1:exon:8342;Parent=Msa1185430-mRNA-1
chr8_1 exon 22629570 22629744 22629570 ID=Msa1185430-mRNA-1:exon:8341;Parent=Msa1185430-mRNA-1
chr8_1 exon 22630405 22630449 22630405 ID=Msa1185430-mRNA-1:exon:8340;Parent=Msa1185430-mRNA-1
chr8_1 CDS 22630405 22630449 22630405 ID=Msa1185430-mRNA-1:cds;Parent=Msa1185430-mRNA-1
chr8_1 CDS 22629570 22629744 22629570 ID=Msa1185430-mRNA-1:cds;Parent=Msa1185430-mRNA-1
chr8_1 CDS 22627692 22627726 22627692 ID=Msa1185430-mRNA-1:cds;Parent=Msa1185430-mRNA-1
chr8_1 CDS 22627325 22627447 22627325 ID=Msa1185430-mRNA-1:cds;Parent=Msa1185430-mRNA-1
chr8_1 CDS 22627142 22627205 22627142 ID=Msa1185430-mRNA-1:cds;Parent=Msa1185430-mRNA-1
chr8_1 CDS 22627020 22627066 22627020 ID=Msa1185430-mRNA-1:cds;Parent=Msa1185430-mRNA-1
chr8_1 CDS 22625938 22626272 22625938 ID=Msa1185430-mRNA-1:cds;Parent=Msa1185430-mRNA-1
chr8_1 CDS 22625496 22625853 22625496 ID=Msa1185430-mRNA-1:cds;Parent=Msa1185430-mRNA-1
chr8_1 CDS 22624718 22625305 22624718 ID=Msa1185430-mRNA-1:cds;Parent=Msa1185430-mRNA-1
chr8_1 CDS 22624334 22624609 22624334 ID=Msa1185430-mRNA-1:cds;Parent=Msa1185430-mRNA-1
chr8_1 three_prime_UTR 22623917 22624333 22623917 ID=Msa1185430-mRNA-1:three_prime_utr;Parent=Msa1185430-mRNA-1
Gene Sequence

>Msa1185430

ATGCATCCCGAGAAGAAGGCAGTGCTGAAGAGATTTGAATCTGAGATACTTGTACCGGCATGGTGGCTGTGTGACTCTGGTGGAAGAATCAGGGGGGTTGGTGCATTGCCGTTTTTCAACTTCGAGGTTGAAGTTTCAACTTTCAAGACAAGAGTGATCACATGCATGGGGCCAGTTTGTTGTCCCGTTGGGCGCAAACAAAAAGCAGAGGGTATTCTCGATCAAGATGATATTTCAGCTGTTGCAAATAGACAGGTTTTCGATGTTATTGTATCCAGCACAGATGATATGGGGCCTTTGAGTCTTGACAATTTTAGAAAAAATATGTCTGCGTCATGGAGAGTTGTTGGATTAGAGACTTCAAATGCTGCCTATGAGGTAAAGCAACCAACAACACATGTTACACAAGAAAAACCAAAGGTGAAGGAAGGAAGATCTTCAGAGGGTCTTACTCACTGGACTGATAGCCCTACACGACAAGTCCGAAGGCAATTAATAGAAAAAAGGCAGGAAAAGCGTGCTGCTGAGTTGGTAAAGATGGACAATGAAGTAATTGTAAAACTTGAAAATGAAGCTATTGAACGTTCAAGATCTGTTGAGTCAGCCGTACTGGGTAAATACAGCATTTGGAGGAAAGAAATTGAGAATGAAAATGCTGATTCTTCTGTTCGGTTTATGAGGGACCAGATCATTATGGCTAGGGTATATGTGAGTATCGCACAGATGAACAACAAGCTTGAACTGTTGCAAGAGCTGCAGTCTAGGCTCAAAGAGAGTCAACATGCTTTAGGTGATGCAATTGCTGATTCAGATCTTCATCACAGTACACGTCAAGAAATAAAGGCTATGGGCCAAGTTCTGTCAAAGGCACGGGGGCAATTGTATGACAGCAAGTTGGTCACTGGAAAATTGAGAGCAATGCTACAGACAGCTGATGAGAAAGTTAGGAGCTTGAAGAAACAAAGCACATTCCTCAGTCAGTTGGCTGCCAAGACCATACCAAGTGGAATTCATTGCTTATCAATGCGCCTCACAATAGATTACTACCTCCTTCCTCCTGAAAAAAGGAAGTTCCCTAGGAGTGAGAACTTGGAGAATCCCAGTCTTTATCATTATGCACTATTTTCAGATAATGTCTTGGCTGCATCCGTTGTTGTGAACTCAGCTGTTACAAATGCAAAGGATCCTTCAAAGCATGTTTTCCACCTTGTTACTGATAAACTCAATTTTGGAGCCATGAACATGTGGTTTCTTTTGAACCCTCCTGGAAAAGCTACAATCCATGTTCACAATGTAGATGATTTTAAGTGGTTAAACTCATCCTACTGCCCTGTATTGCGGCAGCTTGAATCTGCAAAAATGAAAGAGTATTATTTCAAAGCAGGCCATCCAACCACCCTTTCTTCTAGTGCTTCCAATATGAAATATAGAAACCCAAAATATCTCTCGATGCTCAACCATCTTAGATTCTATCTTCCAGAAGTTTATCCTAAATTAGATAAAATCCTTTTTCTTGATGATGACATCGTTGTTCAGAAGGATTTGACAGGATTATGGGAAGTTGATCTTCAGGGGAAAGTAAATGGTGCAGTTGAAACATGTGGTGAAAGCTTTCACCGATTTGACAAATATCTTAACTTTTCAAATCCACATATTGCAAGAAACTTTGATCCAAATGCTTGTGGTTGGGCATATGGCATGAACGTATTTGATCTCAAGGAGTGGAAAAAGAAGGATATCACTGGCATATATCACAAATGGCAAAATATGAATGAAGACAGGGTGCTTTGGAAGCTGGGGACATTACCTCCAGGACTAATGACATTCTATGGGCTGACACATCCACTAAATAAATCGTGGCATGTCCTTGGTTTAGGTTATAGTCCAACCGTAGATCGATCATTGATAGAGAATGCAGCAGTTGTACACTACAATGGTAATATGAAGCCGTGGCTAGCGATTGCCATGACAAAGTATCGGCCTTACTGGACTAAATATGTTAAATACAATCATTCCTATCTGCAGAAATGCAAGTTACATGAATAG
Protein sequence

>Msa1185430

MHPEKKAVLKRFESEILVPAWWLCDSGGRIRGVGALPFFNFEVEVSTFKTRVITCMGPVCCPVGRKQKAEGILDQDDISAVANRQVFDVIVSSTDDMGPLSLDNFRKNMSASWRVVGLETSNAAYEVKQPTTHVTQEKPKVKEGRSSEGLTHWTDSPTRQVRRQLIEKRQEKRAAELVKMDNEVIVKLENEAIERSRSVESAVLGKYSIWRKEIENENADSSVRFMRDQIIMARVYVSIAQMNNKLELLQELQSRLKESQHALGDAIADSDLHHSTRQEIKAMGQVLSKARGQLYDSKLVTGKLRAMLQTADEKVRSLKKQSTFLSQLAAKTIPSGIHCLSMRLTIDYYLLPPEKRKFPRSENLENPSLYHYALFSDNVLAASVVVNSAVTNAKDPSKHVFHLVTDKLNFGAMNMWFLLNPPGKATIHVHNVDDFKWLNSSYCPVLRQLESAKMKEYYFKAGHPTTLSSSASNMKYRNPKYLSMLNHLRFYLPEVYPKLDKILFLDDDIVVQKDLTGLWEVDLQGKVNGAVETCGESFHRFDKYLNFSNPHIARNFDPNACGWAYGMNVFDLKEWKKKDITGIYHKWQNMNEDRVLWKLGTLPPGLMTFYGLTHPLNKSWHVLGLGYSPTVDRSLIENAAVVHYNGNMKPWLAIAMTKYRPYWTKYVKYNHSYLQKCKLHE*