Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1185990 | sp|Q9LXV5|NFYA1_ARATH | 51.095 | 137 | 66 | 1 | 103 | 238 | 120 | 256 | 7.63e-39 | 141 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1185990 | I3TAV7 | 94.737 | 304 | 15 | 1 | 1 | 303 | 1 | 304 | 0.0 | 594 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1185990 | TF | NF-YA |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1185990 | Msa1320630 | 0.897885 | 9.103651e-77 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1185990 | MtrunA17_Chr8g0352251 | 94.502 | 291 | 15 | 1 | 1 | 290 | 1 | 291 | 0.0 | 566 |
| Msa1185990 | MtrunA17_Chr3g0103391 | 37.304 | 319 | 139 | 11 | 21 | 302 | 20 | 314 | 2.52e-46 | 159 |
| Msa1185990 | MtrunA17_Chr2g0292411 | 71.111 | 90 | 26 | 0 | 127 | 216 | 86 | 175 | 1.72e-36 | 130 |
| Msa1185990 | MtrunA17_Chr8g0343451 | 43.415 | 205 | 92 | 9 | 81 | 282 | 95 | 278 | 8.24e-35 | 129 |
| Msa1185990 | MtrunA17_Chr2g0300261 | 48.000 | 150 | 70 | 4 | 114 | 258 | 33 | 179 | 3.64e-34 | 125 |
| Msa1185990 | MtrunA17_Chr2g0329811 | 51.613 | 124 | 53 | 2 | 117 | 233 | 144 | 267 | 1.72e-31 | 120 |
| Msa1185990 | MtrunA17_Chr7g0267581 | 45.752 | 153 | 58 | 6 | 72 | 219 | 99 | 231 | 4.68e-30 | 116 |
| Msa1185990 | MtrunA17_Chr1g0177091 | 54.206 | 107 | 36 | 3 | 109 | 213 | 128 | 223 | 2.91e-28 | 111 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1185990 | AT5G12840.4 | 51.095 | 137 | 66 | 1 | 103 | 238 | 119 | 255 | 7.32e-40 | 141 |
| Msa1185990 | AT5G12840.2 | 51.095 | 137 | 66 | 1 | 103 | 238 | 119 | 255 | 7.32e-40 | 141 |
| Msa1185990 | AT5G12840.5 | 51.095 | 137 | 66 | 1 | 103 | 238 | 120 | 256 | 7.75e-40 | 141 |
| Msa1185990 | AT5G12840.3 | 51.095 | 137 | 66 | 1 | 103 | 238 | 120 | 256 | 7.75e-40 | 141 |
| Msa1185990 | AT5G12840.1 | 51.095 | 137 | 66 | 1 | 103 | 238 | 120 | 256 | 7.75e-40 | 141 |
| Msa1185990 | AT3G20910.1 | 49.660 | 147 | 71 | 2 | 98 | 241 | 108 | 254 | 1.24e-39 | 141 |
| Msa1185990 | AT1G30500.2 | 43.976 | 166 | 77 | 4 | 79 | 236 | 33 | 190 | 6.97e-33 | 120 |
| Msa1185990 | AT1G30500.1 | 43.373 | 166 | 74 | 4 | 79 | 236 | 33 | 186 | 8.05e-32 | 117 |
| Msa1185990 | AT2G34720.1 | 37.949 | 195 | 98 | 5 | 66 | 252 | 8 | 187 | 6.18e-31 | 115 |
| Msa1185990 | AT1G72830.1 | 53.448 | 116 | 49 | 3 | 115 | 225 | 137 | 252 | 1.06e-30 | 119 |
| Msa1185990 | AT1G17590.3 | 57.143 | 105 | 37 | 4 | 115 | 216 | 135 | 234 | 3.87e-30 | 117 |
| Msa1185990 | AT1G17590.2 | 57.143 | 105 | 37 | 4 | 115 | 216 | 135 | 234 | 3.87e-30 | 117 |
| Msa1185990 | AT1G17590.4 | 57.143 | 105 | 37 | 4 | 115 | 216 | 135 | 234 | 3.87e-30 | 117 |
| Msa1185990 | AT1G17590.1 | 57.143 | 105 | 37 | 4 | 115 | 216 | 135 | 234 | 3.87e-30 | 117 |
| Msa1185990 | AT5G06510.1 | 34.348 | 230 | 104 | 8 | 30 | 240 | 13 | 214 | 4.44e-30 | 115 |
| Msa1185990 | AT5G06510.5 | 34.348 | 230 | 104 | 8 | 30 | 240 | 13 | 214 | 4.44e-30 | 115 |
| Msa1185990 | AT5G06510.2 | 34.348 | 230 | 104 | 8 | 30 | 240 | 13 | 214 | 4.44e-30 | 115 |
| Msa1185990 | AT5G06510.6 | 34.348 | 230 | 104 | 8 | 30 | 240 | 13 | 214 | 4.44e-30 | 115 |
| Msa1185990 | AT2G34720.2 | 43.836 | 146 | 63 | 3 | 114 | 252 | 19 | 152 | 7.85e-30 | 112 |
| Msa1185990 | AT2G34720.3 | 43.836 | 146 | 63 | 3 | 114 | 252 | 19 | 152 | 7.85e-30 | 112 |
| Msa1185990 | AT1G72830.2 | 54.701 | 117 | 47 | 5 | 115 | 225 | 137 | 253 | 5.42e-29 | 114 |
| Msa1185990 | AT1G54160.1 | 65.000 | 80 | 27 | 1 | 143 | 221 | 166 | 245 | 7.10e-29 | 113 |
| Msa1185990 | AT5G06510.4 | 48.000 | 125 | 47 | 4 | 119 | 240 | 10 | 119 | 1.53e-28 | 108 |
| Msa1185990 | AT5G06510.7 | 48.000 | 125 | 47 | 4 | 119 | 240 | 10 | 119 | 1.53e-28 | 108 |
| Msa1185990 | AT3G14020.2 | 57.143 | 98 | 40 | 2 | 126 | 221 | 141 | 238 | 2.59e-28 | 111 |
| Msa1185990 | AT3G14020.1 | 57.143 | 98 | 40 | 2 | 126 | 221 | 141 | 238 | 2.59e-28 | 111 |
| Msa1185990 | AT3G05690.2 | 34.470 | 264 | 137 | 11 | 9 | 254 | 33 | 278 | 2.67e-28 | 112 |
| Msa1185990 | AT3G05690.1 | 36.777 | 242 | 117 | 11 | 31 | 254 | 18 | 241 | 3.76e-28 | 110 |
| Msa1185990 | AT5G06510.3 | 48.000 | 125 | 47 | 4 | 119 | 240 | 56 | 165 | 4.08e-28 | 108 |
| Msa1185990 | AT1G72830.3 | 54.023 | 87 | 38 | 1 | 141 | 225 | 141 | 227 | 3.84e-22 | 95.1 |
Find 108 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCTCCAATCATCAGTTTC+TGG | 0.147047 | 8_1:-23891914 | None:intergenic |
| TTCTCTTACATAAAACTAAT+TGG | 0.164762 | 8_1:+23891016 | Msa1185990:five_prime_UTR |
| TCAATTAAATTAGGTAATTA+AGG | 0.204465 | 8_1:+23890135 | Msa1185990:five_prime_UTR |
| CCAAATTGTGCATTTGAATA+AGG | 0.207731 | 8_1:-23892856 | None:intergenic |
| GGTCAAATCTTGAATGCTTA+TGG | 0.216756 | 8_1:+23892877 | Msa1185990:CDS |
| TCTCTTTCTATGTTATTATT+AGG | 0.225399 | 8_1:-23891230 | None:intergenic |
| ACATTACACTCAATTAAATT+AGG | 0.234192 | 8_1:+23890126 | Msa1185990:five_prime_UTR |
| CCTTATTCAAATGCACAATT+TGG | 0.274102 | 8_1:+23892856 | Msa1185990:CDS |
| GTTGACAACTAAGTAAAGTT+TGG | 0.282868 | 8_1:-23890736 | None:intergenic |
| ACAAGTTCCGTCTGCGAATT+CGG | 0.283090 | 8_1:-23892735 | None:intergenic |
| CAGCCTTGGTGGCTTGAAAA+TGG | 0.313297 | 8_1:+23891986 | Msa1185990:CDS |
| AAACAGGAGGGTGACTTCTT+TGG | 0.313426 | 8_1:+23894992 | Msa1185990:CDS |
| GATTCTGCTGCTCTAGAAAA+AGG | 0.320183 | 8_1:+23894821 | Msa1185990:CDS |
| AGGCTGATGATGAGAGTAAA+TGG | 0.326121 | 8_1:-23891969 | None:intergenic |
| TCTTCAGCTGATCAGATAAA+TGG | 0.327548 | 8_1:+23892019 | Msa1185990:CDS |
| ACAGGGCCTGTTTGATGTTT+CGG | 0.328192 | 8_1:-23892677 | None:intergenic |
| GAACTTACTATTGGAAGGTT+TGG | 0.343696 | 8_1:-23891293 | None:intergenic |
| TTGACAAAGCTCATATTGTT+AGG | 0.344917 | 8_1:+23890773 | Msa1185990:five_prime_UTR |
| AGTAAAGAAAATGAGATAAG+AGG | 0.345654 | 8_1:+23890073 | Msa1185990:five_prime_UTR |
| AGTACAACATAAAATATATA+TGG | 0.350169 | 8_1:-23889940 | None:intergenic |
| CTCAATATTCTAATTTCTCT+TGG | 0.353738 | 8_1:-23890387 | None:intergenic |
| TGTCACACATTCAGAGCCTT+TGG | 0.376234 | 8_1:+23892057 | Msa1185990:CDS |
| TTGACAACTAAGTAAAGTTT+GGG | 0.378587 | 8_1:-23890735 | None:intergenic |
| TATCAATGGCAACTCATTCT+TGG | 0.382555 | 8_1:+23895208 | Msa1185990:CDS |
| CTGATCAGCTGAAGATGGTT+TGG | 0.384238 | 8_1:-23892011 | None:intergenic |
| TTCCACACATTATCTTTGAA+TGG | 0.398827 | 8_1:+23895457 | Msa1185990:three_prime_UTR |
| GCATTCTAGCATGATGCATT+TGG | 0.399038 | 8_1:-23894198 | None:intergenic |
| TTGAGAAGGGCAAGGGGAAA+TGG | 0.400323 | 8_1:+23894761 | Msa1185990:CDS |
| GAAAGTTATTAAAGTTAGAA+AGG | 0.407898 | 8_1:+23894324 | Msa1185990:CDS |
| TGAGCCTTGATTCTCATTGT+TGG | 0.412750 | 8_1:-23894870 | None:intergenic |
| TCATCAGTTTCTGGTTTCCC+TGG | 0.428859 | 8_1:-23891905 | None:intergenic |
| TTCACAGGCAAATGGAAAAC+AGG | 0.431715 | 8_1:+23894976 | Msa1185990:CDS |
| AAAAGCTGTGAAAGGATGCC+AGG | 0.439397 | 8_1:+23891887 | Msa1185990:exon |
| ACTCTCATCATCAGCCTTGG+TGG | 0.446091 | 8_1:+23891975 | Msa1185990:CDS |
| TAATGTGTGGAAGGATAGAT+AGG | 0.448960 | 8_1:-23895446 | None:intergenic |
| ATCAGTTACCATGATGGAAA+TGG | 0.459023 | 8_1:+23894935 | Msa1185990:CDS |
| TGTAAAGAGAAACACAAGTA+AGG | 0.460873 | 8_1:-23895297 | None:intergenic |
| AATTCGCAGACGGAACTTGT+TGG | 0.463333 | 8_1:+23892738 | Msa1185990:CDS |
| TGGTAAATGTGGTTGAGGAC+AGG | 0.464978 | 8_1:-23892695 | None:intergenic |
| GCAAAGGTCTTTGTCCTTGT+CGG | 0.465491 | 8_1:-23890183 | None:intergenic |
| TTTGATGTTTCGGTGTTCCT+TGG | 0.466007 | 8_1:-23892667 | None:intergenic |
| GCAGCACATGCACAAAATGC+AGG | 0.482353 | 8_1:+23894904 | Msa1185990:CDS |
| TTTATCTGATCAGCTGAAGA+TGG | 0.483259 | 8_1:-23892016 | None:intergenic |
| CTATGTCATTCACAGGCAAA+TGG | 0.486227 | 8_1:+23894968 | Msa1185990:CDS |
| TTTACTCTCATCATCAGCCT+TGG | 0.487165 | 8_1:+23891972 | Msa1185990:CDS |
| GTAAAGAAAATGAGATAAGA+GGG | 0.487584 | 8_1:+23890074 | Msa1185990:five_prime_UTR |
| GGAAACCAGAAACTGATGAT+TGG | 0.490368 | 8_1:+23891909 | Msa1185990:CDS |
| AACAATACTGGTGCAACATC+GGG | 0.490937 | 8_1:+23894845 | Msa1185990:CDS |
| TCTCAAAGCATGTTGGTGAC+GGG | 0.492087 | 8_1:-23894744 | None:intergenic |
| TTCTCAAAGCATGTTGGTGA+CGG | 0.494518 | 8_1:-23894745 | None:intergenic |
| TGACGGGATTCATGAAGATA+TGG | 0.495855 | 8_1:-23894728 | None:intergenic |
| CTCATGATGCTGTATATCAA+TGG | 0.497051 | 8_1:+23895194 | Msa1185990:CDS |
| CTTAAACAATGTTTCTGTTG+AGG | 0.506583 | 8_1:+23890029 | Msa1185990:intron |
| ATCCATGGTAAATGTGGTTG+AGG | 0.506757 | 8_1:-23892700 | None:intergenic |
| GGAACACCGAAACATCAAAC+AGG | 0.507642 | 8_1:+23892671 | Msa1185990:CDS |
| TAGAAGAACTTACTATTGGA+AGG | 0.510837 | 8_1:-23891298 | None:intergenic |
| GAGAGAATATAAGAATATCA+AGG | 0.514043 | 8_1:-23891169 | None:intergenic |
| TACTAGGAAACACAAGGATA+AGG | 0.518542 | 8_1:+23889959 | Msa1185990:five_prime_UTR |
| TATATTGCAGGTGAAGATGA+AGG | 0.518732 | 8_1:+23895155 | Msa1185990:intron |
| TTCAACATCAGTTACCATGA+TGG | 0.518987 | 8_1:+23894929 | Msa1185990:CDS |
| GGTAAATGTGGTTGAGGACA+GGG | 0.519708 | 8_1:-23892694 | None:intergenic |
| GTCAATGCAAAGCAGTATCA+TGG | 0.520607 | 8_1:+23894256 | Msa1185990:CDS |
| GAGAATAAAGCAAAGTGAGC+AGG | 0.523124 | 8_1:+23891931 | Msa1185990:CDS |
| TACAGCACTATGTCATTCAC+AGG | 0.523214 | 8_1:+23894961 | Msa1185990:CDS |
| CTGTAAAGCCATTTCCATCA+TGG | 0.526707 | 8_1:-23894943 | None:intergenic |
| CAACAATACTGGTGCAACAT+CGG | 0.530920 | 8_1:+23894844 | Msa1185990:CDS |
| TGCTTTGCATTGACATACAC+AGG | 0.531370 | 8_1:-23894247 | None:intergenic |
| ACGAAGACAGTCGCGCGCTA+AGG | 0.538100 | 8_1:+23894288 | Msa1185990:CDS |
| TTGCCCTTCTCAAAGCATGT+TGG | 0.541677 | 8_1:-23894751 | None:intergenic |
| TGAGCTTTGTCAATTGACAT+AGG | 0.543476 | 8_1:-23890763 | None:intergenic |
| GTAAAGAGAAACACAAGTAA+GGG | 0.546239 | 8_1:-23895296 | None:intergenic |
| TTCCATTCAAAGATAATGTG+TGG | 0.546489 | 8_1:-23895459 | None:intergenic |
| CGGATCAAGGTGCTTATCCA+TGG | 0.548060 | 8_1:-23892715 | None:intergenic |
| CACACACAACTGCATCGTAA+AGG | 0.548223 | 8_1:-23890803 | None:intergenic |
| CTCAGGTGGGGACGTTGCCA+AGG | 0.551688 | 8_1:+23892650 | Msa1185990:intron |
| TGCTTATGGACAACAAGCTA+TGG | 0.551820 | 8_1:+23892891 | Msa1185990:CDS |
| ATTCAAAGATAATGTGTGGA+AGG | 0.559373 | 8_1:-23895455 | None:intergenic |
| TTTGCCGCTTAAAATGGAAG+AGG | 0.565386 | 8_1:+23894222 | Msa1185990:CDS |
| TCAGAAGCTGAGTTGCATTG+AGG | 0.568541 | 8_1:-23891267 | None:intergenic |
| TGATATACAGCATCATGAGT+TGG | 0.568591 | 8_1:-23895190 | None:intergenic |
| ACATGCTTTGAGAAGGGCAA+GGG | 0.570857 | 8_1:+23894754 | Msa1185990:CDS |
| GTCACCAACATGCTTTGAGA+AGG | 0.572667 | 8_1:+23894747 | Msa1185990:CDS |
| CTTTCTTTAACTGATAACTC+AGG | 0.574168 | 8_1:+23892091 | Msa1185990:CDS |
| GGTACCAACAATGAGAATCA+AGG | 0.578464 | 8_1:+23894866 | Msa1185990:CDS |
| TTATCAGTTAAAGAAAGTGA+AGG | 0.586779 | 8_1:-23892085 | None:intergenic |
| CATGCTTTGAGAAGGGCAAG+GGG | 0.591440 | 8_1:+23894755 | Msa1185990:CDS |
| ACAGCATCATGAGTTGGATG+AGG | 0.597562 | 8_1:-23895184 | None:intergenic |
| TCACTTGTATGAATCTGAGT+TGG | 0.601238 | 8_1:-23890271 | None:intergenic |
| ATATTGCAGGTGAAGATGAA+GGG | 0.607151 | 8_1:+23895156 | Msa1185990:intron |
| TCACCAACATGCTTTGAGAA+GGG | 0.609839 | 8_1:+23894748 | Msa1185990:CDS |
| TGATGAGAGTAAATGGAAGA+TGG | 0.612845 | 8_1:-23891962 | None:intergenic |
| CAGCACATGCACAAAATGCA+GGG | 0.616147 | 8_1:+23894905 | Msa1185990:CDS |
| TAAAGAGAAACACAAGTAAG+GGG | 0.628270 | 8_1:-23895295 | None:intergenic |
| CATGACGTGTACCATGCCAC+TGG | 0.628689 | 8_1:-23895259 | None:intergenic |
| AAAGCTGTGAAAGGATGCCA+GGG | 0.629084 | 8_1:+23891888 | Msa1185990:exon |
| AACATGCTTTGAGAAGGGCA+AGG | 0.629479 | 8_1:+23894753 | Msa1185990:CDS |
| ACAGGCAAATGGAAAACAGG+AGG | 0.631076 | 8_1:+23894979 | Msa1185990:CDS |
| CTAAGTTAGTTAGACTACAG+TGG | 0.639102 | 8_1:+23895231 | Msa1185990:CDS |
| GTCCTCAACCACATTTACCA+TGG | 0.640828 | 8_1:+23892698 | Msa1185990:CDS |
| GAAAGTGAAGGAGAAACCAA+AGG | 0.644044 | 8_1:-23892073 | None:intergenic |
| CAGTGGTGAAACCAGTGGCA+TGG | 0.644557 | 8_1:+23895248 | Msa1185990:exon |
| CAGGCAAATGGAAAACAGGA+GGG | 0.651426 | 8_1:+23894980 | Msa1185990:CDS |
| AGAAGGGCAAGGGGAAATGG+CGG | 0.651466 | 8_1:+23894764 | Msa1185990:CDS |
| CCTTGATCCGAATTCGCAGA+CGG | 0.651496 | 8_1:+23892728 | Msa1185990:CDS |
| GTGCTTATCCATGGTAAATG+TGG | 0.665524 | 8_1:-23892706 | None:intergenic |
| GACTACAGTGGTGAAACCAG+TGG | 0.694508 | 8_1:+23895243 | Msa1185990:exon |
| AAGTAAGGGGAGAACGAACG+AGG | 0.701281 | 8_1:-23895282 | None:intergenic |
| ATGTTGTACTAGGAAACACA+AGG | 0.704202 | 8_1:+23889953 | Msa1185990:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAATATTTAAAAAAAAT+AGG | - | chr8_1:23891101-23891120 | None:intergenic | 0.0% |
| !!! | AAGTTTTTTTTTTTTTTTGA+GGG | - | chr8_1:23890009-23890028 | None:intergenic | 10.0% |
| !!! | TAAATATTGTTGTATTTTTT+TGG | - | chr8_1:23890494-23890513 | None:intergenic | 10.0% |
| !! | AGAAAAAAACTAATATAAAA+AGG | - | chr8_1:23890908-23890927 | None:intergenic | 10.0% |
| !! | AAAGTAATTTAAATTTCTAT+CGG | - | chr8_1:23893298-23893317 | None:intergenic | 10.0% |
| !!! | TGTAATATGTATTTTTATTT+TGG | + | chr8_1:23893659-23893678 | Msa1185990:intron | 10.0% |
| !!! | TATATATTTTATGTTGTACT+AGG | + | chr8_1:23889943-23889962 | Msa1185990:five_prime_UTR | 15.0% |
| !!! | GAAGTTTTTTTTTTTTTTTG+AGG | - | chr8_1:23890010-23890029 | None:intergenic | 15.0% |
| !! | TCAATTAAATTAGGTAATTA+AGG | + | chr8_1:23890135-23890154 | Msa1185990:five_prime_UTR | 15.0% |
| !!! | AAGGTTACATATTTTTATTT+TGG | + | chr8_1:23890154-23890173 | Msa1185990:five_prime_UTR | 15.0% |
| !!! | AACAATATTTAATCTTTTGA+AGG | + | chr8_1:23890503-23890522 | Msa1185990:five_prime_UTR | 15.0% |
| !!! | TCAGTAAAAAAATTGTTATT+TGG | + | chr8_1:23890830-23890849 | Msa1185990:five_prime_UTR | 15.0% |
| !!! | TTTTCTTTTAAGTATGTATT+TGG | + | chr8_1:23891443-23891462 | Msa1185990:intron | 15.0% |
| !!! | TTTATTATGTTTTTGTGATT+TGG | + | chr8_1:23891833-23891852 | Msa1185990:intron | 15.0% |
| !!! | TATTAAGTTGACATAATTTT+AGG | + | chr8_1:23892226-23892245 | Msa1185990:intron | 15.0% |
| !!! | AATATTTGTAGTTAGTTTTT+CGG | + | chr8_1:23893750-23893769 | Msa1185990:intron | 15.0% |
| !!! | TTTTTTCATCATTGATTATA+AGG | - | chr8_1:23894365-23894384 | None:intergenic | 15.0% |
| !! | TATAATCAATGATGAAAAAA+TGG | + | chr8_1:23894365-23894384 | Msa1185990:intron | 15.0% |
| !! | ATAATATCTTAATTGTATCT+TGG | + | chr8_1:23894525-23894544 | Msa1185990:intron | 15.0% |
| !!! | TTTCTTATTTAATGAAGATT+AGG | + | chr8_1:23894617-23894636 | Msa1185990:intron | 15.0% |
| !! | AATAAAAGAAAAAATCACTT+TGG | + | chr8_1:23895345-23895364 | Msa1185990:three_prime_UTR | 15.0% |
| !! | ACATTACACTCAATTAAATT+AGG | + | chr8_1:23890126-23890145 | Msa1185990:five_prime_UTR | 20.0% |
| !!! | GAGAATTTTATCATCTATTA+CGG | + | chr8_1:23890525-23890544 | Msa1185990:five_prime_UTR | 20.0% |
| !! | TTCTCTTACATAAAACTAAT+TGG | + | chr8_1:23891016-23891035 | Msa1185990:five_prime_UTR | 20.0% |
| !! | TCTCTTTCTATGTTATTATT+AGG | - | chr8_1:23891233-23891252 | None:intergenic | 20.0% |
| !! | TTGAATCAAAACTATAGATT+TGG | - | chr8_1:23891352-23891371 | None:intergenic | 20.0% |
| !!! | TTGTTTTCCTTTATGAAAAA+TGG | + | chr8_1:23891417-23891436 | Msa1185990:intron | 20.0% |
| !!! | TGTTTTCCTTTATGAAAAAT+GGG | + | chr8_1:23891418-23891437 | Msa1185990:intron | 20.0% |
| !!! | AAAATTCCCATTTTTCATAA+AGG | - | chr8_1:23891427-23891446 | None:intergenic | 20.0% |
| !! | AATTCAATGTAATTATGTGT+CGG | + | chr8_1:23891697-23891716 | Msa1185990:intron | 20.0% |
| !! | TGAACAATCATAGTAAATAA+GGG | - | chr8_1:23892335-23892354 | None:intergenic | 20.0% |
| !! | ATGAACAATCATAGTAAATA+AGG | - | chr8_1:23892336-23892355 | None:intergenic | 20.0% |
| !! | CATGAAAAAAAATGTCTTAT+TGG | + | chr8_1:23892626-23892645 | Msa1185990:intron | 20.0% |
| !! | TTGGAAAAATGTAATGTTAA+AGG | - | chr8_1:23892780-23892799 | None:intergenic | 20.0% |
| !! | CATATTCTTATACTATGAAT+CGG | - | chr8_1:23893458-23893477 | None:intergenic | 20.0% |
| !! | CCTATAAAAATAAAAAGTCT+TGG | - | chr8_1:23894075-23894094 | None:intergenic | 20.0% |
| !!! | CCAAGACTTTTTATTTTTAT+AGG | + | chr8_1:23894072-23894091 | Msa1185990:intron | 20.0% |
| !! | AAGAATATTAAAAGACTGAT+AGG | - | chr8_1:23894098-23894117 | None:intergenic | 20.0% |
| !! | GAAAGTTATTAAAGTTAGAA+AGG | + | chr8_1:23894324-23894343 | Msa1185990:CDS | 20.0% |
| !! | TTCTTAATATAAAACTCTTG+AGG | - | chr8_1:23894489-23894508 | None:intergenic | 20.0% |
| !! | TTTATAATTTATACCTGTTG+CGG | - | chr8_1:23895068-23895087 | None:intergenic | 20.0% |
| ! | AGTAAAGAAAATGAGATAAG+AGG | + | chr8_1:23890073-23890092 | Msa1185990:five_prime_UTR | 25.0% |
| ! | GTAAAGAAAATGAGATAAGA+GGG | + | chr8_1:23890074-23890093 | Msa1185990:five_prime_UTR | 25.0% |
| ! | CTCAATATTCTAATTTCTCT+TGG | - | chr8_1:23890390-23890409 | None:intergenic | 25.0% |
| ! | TTGACAACTAAGTAAAGTTT+GGG | - | chr8_1:23890738-23890757 | None:intergenic | 25.0% |
| ! | GAGAGAATATAAGAATATCA+AGG | - | chr8_1:23891172-23891191 | None:intergenic | 25.0% |
| !! | TCTTTAGAAGAACTTACTAT+TGG | - | chr8_1:23891305-23891324 | None:intergenic | 25.0% |
| !! | ATTTGACCACAATTTTGTAA+AGG | + | chr8_1:23891372-23891391 | Msa1185990:intron | 25.0% |
| !! | TTTGACCACAATTTTGTAAA+GGG | + | chr8_1:23891373-23891392 | Msa1185990:intron | 25.0% |
| ! | TTCAGTCAAGTAAATGAAAA+AGG | + | chr8_1:23891509-23891528 | Msa1185990:intron | 25.0% |
| ! | TCAGTCAAGTAAATGAAAAA+GGG | + | chr8_1:23891510-23891529 | Msa1185990:intron | 25.0% |
| !!! | ATCACTTTGTTTTCATACTT+TGG | + | chr8_1:23891543-23891562 | Msa1185990:intron | 25.0% |
| ! | TGATTTCCTCATATTATTAG+TGG | - | chr8_1:23891674-23891693 | None:intergenic | 25.0% |
| !!! | GAATTTGTTGTATCTTTGTT+TGG | + | chr8_1:23891855-23891874 | Msa1185990:intron | 25.0% |
| ! | TTATCAGTTAAAGAAAGTGA+AGG | - | chr8_1:23892088-23892107 | None:intergenic | 25.0% |
| ! | AAACAAGAAAAAGTTTGAAG+AGG | - | chr8_1:23892133-23892152 | None:intergenic | 25.0% |
| ! | TTAAGATGAAAAAGTCCAAT+TGG | - | chr8_1:23892284-23892303 | None:intergenic | 25.0% |
| ! | AACAATCATAGTAAATAAGG+GGG | - | chr8_1:23892333-23892352 | None:intergenic | 25.0% |
| ! | GAACAATCATAGTAAATAAG+GGG | - | chr8_1:23892334-23892353 | None:intergenic | 25.0% |
| ! | ACTATGATTGTTCATAATCA+AGG | + | chr8_1:23892341-23892360 | Msa1185990:intron | 25.0% |
| ! | CTATGATTGTTCATAATCAA+GGG | + | chr8_1:23892342-23892361 | Msa1185990:intron | 25.0% |
| ! | ATAATCAAGGGAAACTTATT+TGG | + | chr8_1:23892354-23892373 | Msa1185990:intron | 25.0% |
| ! | ATAAGCAATCATAGTAAACA+TGG | - | chr8_1:23892416-23892435 | None:intergenic | 25.0% |
| !!! | CTCTTTTTTAATCTATAGAC+CGG | + | chr8_1:23892973-23892992 | Msa1185990:intron | 25.0% |
| ! | AATAAAAAGAAGGTAAGTTC+CGG | - | chr8_1:23892995-23893014 | None:intergenic | 25.0% |
| !! | CTTACCTTCTTTTTATTCAT+TGG | + | chr8_1:23892998-23893017 | Msa1185990:intron | 25.0% |
| ! | ATTTGTTTACTTCTTGTGTT+TGG | + | chr8_1:23893028-23893047 | Msa1185990:intron | 25.0% |
| ! | ATATTCATTTATTCCTTGCA+AGG | + | chr8_1:23893124-23893143 | Msa1185990:intron | 25.0% |
| !!! | CGGATATTTCTAAAGTATAT+TGG | - | chr8_1:23893278-23893297 | None:intergenic | 25.0% |
| ! | AAAATGTATCCGAGAAATAT+CGG | - | chr8_1:23893335-23893354 | None:intergenic | 25.0% |
| !! | ATAAGAATATGTGCTGATAT+AGG | + | chr8_1:23893467-23893486 | Msa1185990:intron | 25.0% |
| ! | TACACATTCACATTGTTTAT+TGG | - | chr8_1:23893594-23893613 | None:intergenic | 25.0% |
| ! | ATATTACACACAAAGAAATC+CGG | - | chr8_1:23893647-23893666 | None:intergenic | 25.0% |
| ! | AAAAAAAGGAAAAGAAAGAG+AGG | - | chr8_1:23894050-23894069 | None:intergenic | 25.0% |
| ! | AAAAAGTCTTGGACAAAAAA+AGG | - | chr8_1:23894064-23894083 | None:intergenic | 25.0% |
| ! | TATCATATTTGTGTATCTGT+TGG | + | chr8_1:23894416-23894435 | Msa1185990:intron | 25.0% |
| !!! | GCTTAATCTTTTAGAAAAGT+TGG | - | chr8_1:23894451-23894470 | None:intergenic | 25.0% |
| !! | TTCTAAAAGATTAAGCAGTT+TGG | + | chr8_1:23894455-23894474 | Msa1185990:intron | 25.0% |
| !!! | AATATAGAAAGCATTCCTAA+GGG | - | chr8_1:23894575-23894594 | None:intergenic | 25.0% |
| !!! | AAATATAGAAAGCATTCCTA+AGG | - | chr8_1:23894576-23894595 | None:intergenic | 25.0% |
| ! | TATGATCAATTCTACACAAA+TGG | - | chr8_1:23894679-23894698 | None:intergenic | 25.0% |
| ! | GGTAAAAAGATTGAATCAAA+TGG | + | chr8_1:23895013-23895032 | Msa1185990:CDS | 25.0% |
| ! | CTTAAACAATGTTTCTGTTG+AGG | + | chr8_1:23890029-23890048 | Msa1185990:intron | 30.0% |
| ! | CAATGATGTGTTGACAAAAA+TGG | - | chr8_1:23890101-23890120 | None:intergenic | 30.0% |
| ! | TTATTTTCTACTTCACGCAA+AGG | - | chr8_1:23890202-23890221 | None:intergenic | 30.0% |
| GTTGACAACTAAGTAAAGTT+TGG | - | chr8_1:23890739-23890758 | None:intergenic | 30.0% | |
| TTGACAAAGCTCATATTGTT+AGG | + | chr8_1:23890773-23890792 | Msa1185990:five_prime_UTR | 30.0% | |
| TAGAAGAACTTACTATTGGA+AGG | - | chr8_1:23891301-23891320 | None:intergenic | 30.0% | |
| AAACACCCTTTACAAAATTG+TGG | - | chr8_1:23891381-23891400 | None:intergenic | 30.0% | |
| !! | TATGTATTTGGTTTGCAACA+AGG | + | chr8_1:23891455-23891474 | Msa1185990:intron | 30.0% |
| AGCTTATCTAAGTAAAAGCA+CGG | + | chr8_1:23891620-23891639 | Msa1185990:intron | 30.0% | |
| ! | TGTATCTTTGTTTGGTTGAA+AGG | + | chr8_1:23891863-23891882 | Msa1185990:intron | 30.0% |
| CTTTCTTTAACTGATAACTC+AGG | + | chr8_1:23892091-23892110 | Msa1185990:CDS | 30.0% | |
| ! | ATTTTAGGCCATTTGCAATT+TGG | + | chr8_1:23892241-23892260 | Msa1185990:intron | 30.0% |
| TCTAGATTTGTCAAACCAAT+TGG | + | chr8_1:23892266-23892285 | Msa1185990:intron | 30.0% | |
| ATGGAGATCAAAAGTTCAAT+TGG | - | chr8_1:23892397-23892416 | None:intergenic | 30.0% | |
| ACTATGATTGCTTATAATCC+AGG | + | chr8_1:23892421-23892440 | Msa1185990:intron | 30.0% | |
| CTATGATTGCTTATAATCCA+GGG | + | chr8_1:23892422-23892441 | Msa1185990:intron | 30.0% | |
| TTATAATCCAGGGAAACTTA+TGG | + | chr8_1:23892432-23892451 | Msa1185990:intron | 30.0% | |
| AGATACAAGTAACTTCTTGA+AGG | + | chr8_1:23892456-23892475 | Msa1185990:intron | 30.0% | |
| ! | AAAAATGTCTTATTGGTCTC+AGG | + | chr8_1:23892633-23892652 | Msa1185990:intron | 30.0% |
| ATCATGATGTGTACATATCT+TGG | - | chr8_1:23892799-23892818 | None:intergenic | 30.0% | |
| ! | TGATGAACTTTTGTCATATG+TGG | + | chr8_1:23892815-23892834 | Msa1185990:intron | 30.0% |
| CCAAATTGTGCATTTGAATA+AGG | - | chr8_1:23892859-23892878 | None:intergenic | 30.0% | |
| CCTTATTCAAATGCACAATT+TGG | + | chr8_1:23892856-23892875 | Msa1185990:CDS | 30.0% | |
| CTTGCCAATGAATAAAAAGA+AGG | - | chr8_1:23893005-23893024 | None:intergenic | 30.0% | |
| !! | TTTCTTCAGTTGGTAAGAAA+GGG | - | chr8_1:23893360-23893379 | None:intergenic | 30.0% |
| ! | AATATGTGCTGATATAGGTA+GGG | + | chr8_1:23893472-23893491 | Msa1185990:intron | 30.0% |
| TATCTGTACTCTTATGTATC+CGG | + | chr8_1:23893625-23893644 | Msa1185990:intron | 30.0% | |
| ACGATTACAATGTACTAACA+TGG | - | chr8_1:23893873-23893892 | None:intergenic | 30.0% | |
| GTATCTTTAACTGTATGTCT+TGG | + | chr8_1:23893909-23893928 | Msa1185990:intron | 30.0% | |
| AAAGATGAATCTTGTGCAAA+AGG | - | chr8_1:23893955-23893974 | None:intergenic | 30.0% | |
| CACAAGATTCATCTTTATGA+TGG | + | chr8_1:23893959-23893978 | Msa1185990:intron | 30.0% | |
| AAGATTAAGCAGTTTGGAAA+AGG | + | chr8_1:23894461-23894480 | Msa1185990:intron | 30.0% | |
| ATTGTATCTTGGATCAATCT+AGG | + | chr8_1:23894536-23894555 | Msa1185990:intron | 30.0% | |
| TTGTATCTTGGATCAATCTA+GGG | + | chr8_1:23894537-23894556 | Msa1185990:intron | 30.0% | |
| ATGTAAGAATTGTCAGCATA+TGG | - | chr8_1:23895127-23895146 | None:intergenic | 30.0% | |
| ACATGTCTTACATATATTGC+AGG | + | chr8_1:23895143-23895162 | Msa1185990:intron | 30.0% | |
| TAAAGAGAAACACAAGTAAG+GGG | - | chr8_1:23895298-23895317 | None:intergenic | 30.0% | |
| GTAAAGAGAAACACAAGTAA+GGG | - | chr8_1:23895299-23895318 | None:intergenic | 30.0% | |
| TGTAAAGAGAAACACAAGTA+AGG | - | chr8_1:23895300-23895319 | None:intergenic | 30.0% | |
| ATTCAAAGATAATGTGTGGA+AGG | - | chr8_1:23895458-23895477 | None:intergenic | 30.0% | |
| TTCCACACATTATCTTTGAA+TGG | + | chr8_1:23895457-23895476 | Msa1185990:three_prime_UTR | 30.0% | |
| TTCCATTCAAAGATAATGTG+TGG | - | chr8_1:23895462-23895481 | None:intergenic | 30.0% | |
| ATGTTGTACTAGGAAACACA+AGG | + | chr8_1:23889953-23889972 | Msa1185990:five_prime_UTR | 35.0% | |
| TACTAGGAAACACAAGGATA+AGG | + | chr8_1:23889959-23889978 | Msa1185990:five_prime_UTR | 35.0% | |
| !!! | TATTTTGGTTTTCTCCGACA+AGG | + | chr8_1:23890169-23890188 | Msa1185990:five_prime_UTR | 35.0% |
| TCACTTGTATGAATCTGAGT+TGG | - | chr8_1:23890274-23890293 | None:intergenic | 35.0% | |
| ! | TGAGCTTTGTCAATTGACAT+AGG | - | chr8_1:23890766-23890785 | None:intergenic | 35.0% |
| GAACTTACTATTGGAAGGTT+TGG | - | chr8_1:23891296-23891315 | None:intergenic | 35.0% | |
| ! | TCTAAGTAAAAGCACGGATA+TGG | + | chr8_1:23891626-23891645 | Msa1185990:intron | 35.0% |
| CAGACACCACTAATAATATG+AGG | + | chr8_1:23891665-23891684 | Msa1185990:intron | 35.0% | |
| TGAAAGGAAAAAGCTGTGAA+AGG | + | chr8_1:23891879-23891898 | Msa1185990:intron | 35.0% | |
| ATTCTCCAATCATCAGTTTC+TGG | - | chr8_1:23891917-23891936 | None:intergenic | 35.0% | |
| TGATGAGAGTAAATGGAAGA+TGG | - | chr8_1:23891965-23891984 | None:intergenic | 35.0% | |
| TTTATCTGATCAGCTGAAGA+TGG | - | chr8_1:23892019-23892038 | None:intergenic | 35.0% | |
| TCTTCAGCTGATCAGATAAA+TGG | + | chr8_1:23892019-23892038 | Msa1185990:CDS | 35.0% | |
| ! | TTCCTTTTGCATACACTTCT+TGG | + | chr8_1:23892174-23892193 | Msa1185990:intron | 35.0% |
| TCTAGATGCCAAATTGCAAA+TGG | - | chr8_1:23892252-23892271 | None:intergenic | 35.0% | |
| ! | CTTTTGTCATATGTGGTTAC+AGG | + | chr8_1:23892822-23892841 | Msa1185990:intron | 35.0% |
| GGTCAAATCTTGAATGCTTA+TGG | + | chr8_1:23892877-23892896 | Msa1185990:CDS | 35.0% | |
| TAATATGTGATGTCCTTGCA+AGG | - | chr8_1:23893140-23893159 | None:intergenic | 35.0% | |
| ATACTTCCACCGATATTTCT+CGG | + | chr8_1:23893323-23893342 | Msa1185990:intron | 35.0% | |
| !! | GTTTCTTCAGTTGGTAAGAA+AGG | - | chr8_1:23893361-23893380 | None:intergenic | 35.0% |
| !! | ATGACAGTTGTTTCTTCAGT+TGG | - | chr8_1:23893370-23893389 | None:intergenic | 35.0% |
| ! | GAATATGTGCTGATATAGGT+AGG | + | chr8_1:23893471-23893490 | Msa1185990:intron | 35.0% |
| GCATGTTCTTAATTGTGTGT+AGG | + | chr8_1:23893713-23893732 | Msa1185990:intron | 35.0% | |
| TCTTGTGCAAAAGGTAATGA+GGG | - | chr8_1:23893946-23893965 | None:intergenic | 35.0% | |
| ATCTTGTGCAAAAGGTAATG+AGG | - | chr8_1:23893947-23893966 | None:intergenic | 35.0% | |
| !! | AATGCTTTTGCCGCTTAAAA+TGG | + | chr8_1:23894216-23894235 | Msa1185990:CDS | 35.0% |
| CTAGAAAAAGGCAACAATAC+TGG | + | chr8_1:23894833-23894852 | Msa1185990:CDS | 35.0% | |
| AATTTATACCTGTTGCGGTA+TGG | - | chr8_1:23895063-23895082 | None:intergenic | 35.0% | |
| TATATTGCAGGTGAAGATGA+AGG | + | chr8_1:23895155-23895174 | Msa1185990:intron | 35.0% | |
| ATATTGCAGGTGAAGATGAA+GGG | + | chr8_1:23895156-23895175 | Msa1185990:intron | 35.0% | |
| TGATATACAGCATCATGAGT+TGG | - | chr8_1:23895193-23895212 | None:intergenic | 35.0% | |
| CTCATGATGCTGTATATCAA+TGG | + | chr8_1:23895194-23895213 | Msa1185990:CDS | 35.0% | |
| TATCAATGGCAACTCATTCT+TGG | + | chr8_1:23895208-23895227 | Msa1185990:CDS | 35.0% | |
| CTAAGTTAGTTAGACTACAG+TGG | + | chr8_1:23895231-23895250 | Msa1185990:CDS | 35.0% | |
| ! | TGTCTCACTCATTTTGCAAA+TGG | - | chr8_1:23895325-23895344 | None:intergenic | 35.0% |
| TAATGTGTGGAAGGATAGAT+AGG | - | chr8_1:23895449-23895468 | None:intergenic | 35.0% | |
| AAGCTTAAGAACACAGAGCT+TGG | + | chr8_1:23891578-23891597 | Msa1185990:intron | 40.0% | |
| ACATTTAGTCCCTTGAAGCA+CGG | - | chr8_1:23891775-23891794 | None:intergenic | 40.0% | |
| GGAAACCAGAAACTGATGAT+TGG | + | chr8_1:23891909-23891928 | Msa1185990:CDS | 40.0% | |
| GAGAATAAAGCAAAGTGAGC+AGG | + | chr8_1:23891931-23891950 | Msa1185990:CDS | 40.0% | |
| ! | AGGCTGATGATGAGAGTAAA+TGG | - | chr8_1:23891972-23891991 | None:intergenic | 40.0% |
| TTTACTCTCATCATCAGCCT+TGG | + | chr8_1:23891972-23891991 | Msa1185990:CDS | 40.0% | |
| GAAAGTGAAGGAGAAACCAA+AGG | - | chr8_1:23892076-23892095 | None:intergenic | 40.0% | |
| ! | AGCCAAGAAGTGTATGCAAA+AGG | - | chr8_1:23892179-23892198 | None:intergenic | 40.0% |
| GTATCTTCCATAAGTTTCCC+TGG | - | chr8_1:23892442-23892461 | None:intergenic | 40.0% | |
| ! | AATGTCTTATTGGTCTCAGG+TGG | + | chr8_1:23892636-23892655 | Msa1185990:intron | 40.0% |
| ! | ATGTCTTATTGGTCTCAGGT+GGG | + | chr8_1:23892637-23892656 | Msa1185990:intron | 40.0% |
| !! | TTTGATGTTTCGGTGTTCCT+TGG | - | chr8_1:23892670-23892689 | None:intergenic | 40.0% |
| ATCCATGGTAAATGTGGTTG+AGG | - | chr8_1:23892703-23892722 | None:intergenic | 40.0% | |
| GTGCTTATCCATGGTAAATG+TGG | - | chr8_1:23892709-23892728 | None:intergenic | 40.0% | |
| TGCTTATGGACAACAAGCTA+TGG | + | chr8_1:23892891-23892910 | Msa1185990:CDS | 40.0% | |
| !! | ACTTCTTGTGTTTGGTGTCT+AGG | + | chr8_1:23893036-23893055 | Msa1185990:intron | 40.0% |
| CACCTATATCTGTGCATGAT+AGG | + | chr8_1:23893073-23893092 | Msa1185990:intron | 40.0% | |
| AGCCTATCATGCACAGATAT+AGG | - | chr8_1:23893078-23893097 | None:intergenic | 40.0% | |
| ATCTGTGCATGATAGGCTTA+TGG | + | chr8_1:23893080-23893099 | Msa1185990:intron | 40.0% | |
| ATGTATCCGAGAAATATCGG+TGG | - | chr8_1:23893332-23893351 | None:intergenic | 40.0% | |
| GAAGACATCCTTTCTCTCTA+TGG | + | chr8_1:23893998-23894017 | Msa1185990:intron | 40.0% | |
| GCAAAAGTCCATAGAGAGAA+AGG | - | chr8_1:23894009-23894028 | None:intergenic | 40.0% | |
| GCATTCTAGCATGATGCATT+TGG | - | chr8_1:23894201-23894220 | None:intergenic | 40.0% | |
| ! | TTTGCCGCTTAAAATGGAAG+AGG | + | chr8_1:23894222-23894241 | Msa1185990:CDS | 40.0% |
| ! | GGTTCCTCTTCCATTTTAAG+CGG | - | chr8_1:23894229-23894248 | None:intergenic | 40.0% |
| ! | TGCTTTGCATTGACATACAC+AGG | - | chr8_1:23894250-23894269 | None:intergenic | 40.0% |
| GTCAATGCAAAGCAGTATCA+TGG | + | chr8_1:23894256-23894275 | Msa1185990:CDS | 40.0% | |
| GGGTAACTTAACTATCCCTT+AGG | + | chr8_1:23894557-23894576 | Msa1185990:intron | 40.0% | |
| TGACGGGATTCATGAAGATA+TGG | - | chr8_1:23894731-23894750 | None:intergenic | 40.0% | |
| ! | TTCTCAAAGCATGTTGGTGA+CGG | - | chr8_1:23894748-23894767 | None:intergenic | 40.0% |
| !! | TCACCAACATGCTTTGAGAA+GGG | + | chr8_1:23894748-23894767 | Msa1185990:CDS | 40.0% |
| !! | GATTCTGCTGCTCTAGAAAA+AGG | + | chr8_1:23894821-23894840 | Msa1185990:CDS | 40.0% |
| CAACAATACTGGTGCAACAT+CGG | + | chr8_1:23894844-23894863 | Msa1185990:CDS | 40.0% | |
| AACAATACTGGTGCAACATC+GGG | + | chr8_1:23894845-23894864 | Msa1185990:CDS | 40.0% | |
| GGTACCAACAATGAGAATCA+AGG | + | chr8_1:23894866-23894885 | Msa1185990:CDS | 40.0% | |
| TGAGCCTTGATTCTCATTGT+TGG | - | chr8_1:23894873-23894892 | None:intergenic | 40.0% | |
| CTGTAAAGCCATTTCCATCA+TGG | - | chr8_1:23894946-23894965 | None:intergenic | 40.0% | |
| TACAGCACTATGTCATTCAC+AGG | + | chr8_1:23894961-23894980 | Msa1185990:CDS | 40.0% | |
| CTATGTCATTCACAGGCAAA+TGG | + | chr8_1:23894968-23894987 | Msa1185990:CDS | 40.0% | |
| TTCACAGGCAAATGGAAAAC+AGG | + | chr8_1:23894976-23894995 | Msa1185990:CDS | 40.0% | |
| GCAAAGGTCTTTGTCCTTGT+CGG | - | chr8_1:23890186-23890205 | None:intergenic | 45.0% | |
| CACACACAACTGCATCGTAA+AGG | - | chr8_1:23890806-23890825 | None:intergenic | 45.0% | |
| TCAGAAGCTGAGTTGCATTG+AGG | - | chr8_1:23891270-23891289 | None:intergenic | 45.0% | |
| AAAAGCTGTGAAAGGATGCC+AGG | + | chr8_1:23891887-23891906 | Msa1185990:exon | 45.0% | |
| AAAGCTGTGAAAGGATGCCA+GGG | + | chr8_1:23891888-23891907 | Msa1185990:exon | 45.0% | |
| !! | TCATCAGTTTCTGGTTTCCC+TGG | - | chr8_1:23891908-23891927 | None:intergenic | 45.0% |
| CTGATCAGCTGAAGATGGTT+TGG | - | chr8_1:23892014-23892033 | None:intergenic | 45.0% | |
| TGTCACACATTCAGAGCCTT+TGG | + | chr8_1:23892057-23892076 | Msa1185990:CDS | 45.0% | |
| ! | TGTCTTATTGGTCTCAGGTG+GGG | + | chr8_1:23892638-23892657 | Msa1185990:intron | 45.0% |
| GGAACACCGAAACATCAAAC+AGG | + | chr8_1:23892671-23892690 | Msa1185990:CDS | 45.0% | |
| ACAGGGCCTGTTTGATGTTT+CGG | - | chr8_1:23892680-23892699 | None:intergenic | 45.0% | |
| GGTAAATGTGGTTGAGGACA+GGG | - | chr8_1:23892697-23892716 | None:intergenic | 45.0% | |
| TGGTAAATGTGGTTGAGGAC+AGG | - | chr8_1:23892698-23892717 | None:intergenic | 45.0% | |
| GTCCTCAACCACATTTACCA+TGG | + | chr8_1:23892698-23892717 | Msa1185990:CDS | 45.0% | |
| ACAAGTTCCGTCTGCGAATT+CGG | - | chr8_1:23892738-23892757 | None:intergenic | 45.0% | |
| AATTCGCAGACGGAACTTGT+TGG | + | chr8_1:23892738-23892757 | Msa1185990:CDS | 45.0% | |
| ACTTGAGTCCTAACAGCTGT+TGG | + | chr8_1:23894147-23894166 | Msa1185990:intron | 45.0% | |
| GCATAATGCCAACAGCTGTT+AGG | - | chr8_1:23894158-23894177 | None:intergenic | 45.0% | |
| !! | TCTCAAAGCATGTTGGTGAC+GGG | - | chr8_1:23894747-23894766 | None:intergenic | 45.0% |
| !! | GTCACCAACATGCTTTGAGA+AGG | + | chr8_1:23894747-23894766 | Msa1185990:CDS | 45.0% |
| TTGCCCTTCTCAAAGCATGT+TGG | - | chr8_1:23894754-23894773 | None:intergenic | 45.0% | |
| !! | AACATGCTTTGAGAAGGGCA+AGG | + | chr8_1:23894753-23894772 | Msa1185990:CDS | 45.0% |
| !! | ACATGCTTTGAGAAGGGCAA+GGG | + | chr8_1:23894754-23894773 | Msa1185990:CDS | 45.0% |
| CAGCACATGCACAAAATGCA+GGG | + | chr8_1:23894905-23894924 | Msa1185990:CDS | 45.0% | |
| ACAGGCAAATGGAAAACAGG+AGG | + | chr8_1:23894979-23894998 | Msa1185990:CDS | 45.0% | |
| CAGGCAAATGGAAAACAGGA+GGG | + | chr8_1:23894980-23894999 | Msa1185990:CDS | 45.0% | |
| AAACAGGAGGGTGACTTCTT+TGG | + | chr8_1:23894992-23895011 | Msa1185990:CDS | 45.0% | |
| ! | ACAGCATCATGAGTTGGATG+AGG | - | chr8_1:23895187-23895206 | None:intergenic | 45.0% |
| GATTAGACGTGTCCAGGTGT+CGG | - | chr8_1:23891742-23891761 | None:intergenic | 50.0% | |
| ACTCTCATCATCAGCCTTGG+TGG | + | chr8_1:23891975-23891994 | Msa1185990:CDS | 50.0% | |
| ! | CAGCCTTGGTGGCTTGAAAA+TGG | + | chr8_1:23891986-23892005 | Msa1185990:CDS | 50.0% |
| !! | GAGCCATTTTCAAGCCACCA+AGG | - | chr8_1:23891992-23892011 | None:intergenic | 50.0% |
| ! | CGGATCAAGGTGCTTATCCA+TGG | - | chr8_1:23892718-23892737 | None:intergenic | 50.0% |
| CCTTGATCCGAATTCGCAGA+CGG | + | chr8_1:23892728-23892747 | Msa1185990:CDS | 50.0% | |
| !! | CATGCTTTGAGAAGGGCAAG+GGG | + | chr8_1:23894755-23894774 | Msa1185990:CDS | 50.0% |
| TTGAGAAGGGCAAGGGGAAA+TGG | + | chr8_1:23894761-23894780 | Msa1185990:CDS | 50.0% | |
| GCAGCACATGCACAAAATGC+AGG | + | chr8_1:23894904-23894923 | Msa1185990:CDS | 50.0% | |
| ACCTGTTGCGGTATGGTTGA+GGG | - | chr8_1:23895056-23895075 | None:intergenic | 50.0% | |
| TACCTGTTGCGGTATGGTTG+AGG | - | chr8_1:23895057-23895076 | None:intergenic | 50.0% | |
| GACTACAGTGGTGAAACCAG+TGG | + | chr8_1:23895243-23895262 | Msa1185990:exon | 50.0% | |
| AAGTAAGGGGAGAACGAACG+AGG | - | chr8_1:23895285-23895304 | None:intergenic | 50.0% | |
| ACCTGGACACGTCTAATCCG+AGG | + | chr8_1:23891744-23891763 | Msa1185990:intron | 55.0% | |
| ! | TCCTCGGATTAGACGTGTCC+AGG | - | chr8_1:23891748-23891767 | None:intergenic | 55.0% |
| CTTGAAGCACGGACACTCCT+CGG | - | chr8_1:23891764-23891783 | None:intergenic | 55.0% | |
| !! | GAGGAGTGTCCGTGCTTCAA+GGG | + | chr8_1:23891763-23891782 | Msa1185990:intron | 55.0% |
| CCGTCTGCGAATTCGGATCA+AGG | - | chr8_1:23892731-23892750 | None:intergenic | 55.0% | |
| AGAAGGGCAAGGGGAAATGG+CGG | + | chr8_1:23894764-23894783 | Msa1185990:CDS | 55.0% | |
| GTTGCGGTATGGTTGAGGGA+GGG | - | chr8_1:23895052-23895071 | None:intergenic | 55.0% | |
| TGTTGCGGTATGGTTGAGGG+AGG | - | chr8_1:23895053-23895072 | None:intergenic | 55.0% | |
| TCCCTCAACCATACCGCAAC+AGG | + | chr8_1:23895052-23895071 | Msa1185990:intron | 55.0% | |
| CAGTGGTGAAACCAGTGGCA+TGG | + | chr8_1:23895248-23895267 | Msa1185990:exon | 55.0% | |
| CATGACGTGTACCATGCCAC+TGG | - | chr8_1:23895262-23895281 | None:intergenic | 55.0% | |
| CACGACACATGTCCGACACC+TGG | + | chr8_1:23891727-23891746 | Msa1185990:intron | 60.0% | |
| !! | CGAGGAGTGTCCGTGCTTCA+AGG | + | chr8_1:23891762-23891781 | Msa1185990:intron | 60.0% |
| ACGAAGACAGTCGCGCGCTA+AGG | + | chr8_1:23894288-23894307 | Msa1185990:CDS | 60.0% | |
| CTCAGGTGGGGACGTTGCCA+AGG | + | chr8_1:23892650-23892669 | Msa1185990:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 23889942 | 23895501 | 23889942 | ID=Msa1185990;Name=Msa1185990 |
| chr8_1 | mRNA | 23889942 | 23895501 | 23889942 | ID=Msa1185990-mRNA-1;Parent=Msa1185990;Name=Msa1185990-mRNA-1;_AED=0.13;_eAED=0.13;_QI=1348|0.85|0.87|1|0.71|0.62|8|245|319 |
| chr8_1 | exon | 23889942 | 23890002 | 23889942 | ID=Msa1185990-mRNA-1:exon:8714;Parent=Msa1185990-mRNA-1 |
| chr8_1 | exon | 23890038 | 23891307 | 23890038 | ID=Msa1185990-mRNA-1:exon:8715;Parent=Msa1185990-mRNA-1 |
| chr8_1 | exon | 23891885 | 23892112 | 23891885 | ID=Msa1185990-mRNA-1:exon:8716;Parent=Msa1185990-mRNA-1 |
| chr8_1 | exon | 23892655 | 23892770 | 23892655 | ID=Msa1185990-mRNA-1:exon:8717;Parent=Msa1185990-mRNA-1 |
| chr8_1 | exon | 23892844 | 23892912 | 23892844 | ID=Msa1185990-mRNA-1:exon:8718;Parent=Msa1185990-mRNA-1 |
| chr8_1 | exon | 23894181 | 23894345 | 23894181 | ID=Msa1185990-mRNA-1:exon:8719;Parent=Msa1185990-mRNA-1 |
| chr8_1 | exon | 23894728 | 23895034 | 23894728 | ID=Msa1185990-mRNA-1:exon:8720;Parent=Msa1185990-mRNA-1 |
| chr8_1 | exon | 23895165 | 23895501 | 23895165 | ID=Msa1185990-mRNA-1:exon:8721;Parent=Msa1185990-mRNA-1 |
| chr8_1 | five_prime_UTR | 23889942 | 23890002 | 23889942 | ID=Msa1185990-mRNA-1:five_prime_utr;Parent=Msa1185990-mRNA-1 |
| chr8_1 | five_prime_UTR | 23890038 | 23891307 | 23890038 | ID=Msa1185990-mRNA-1:five_prime_utr;Parent=Msa1185990-mRNA-1 |
| chr8_1 | five_prime_UTR | 23891885 | 23891901 | 23891885 | ID=Msa1185990-mRNA-1:five_prime_utr;Parent=Msa1185990-mRNA-1 |
| chr8_1 | CDS | 23891902 | 23892112 | 23891902 | ID=Msa1185990-mRNA-1:cds;Parent=Msa1185990-mRNA-1 |
| chr8_1 | CDS | 23892655 | 23892770 | 23892655 | ID=Msa1185990-mRNA-1:cds;Parent=Msa1185990-mRNA-1 |
| chr8_1 | CDS | 23892844 | 23892912 | 23892844 | ID=Msa1185990-mRNA-1:cds;Parent=Msa1185990-mRNA-1 |
| chr8_1 | CDS | 23894181 | 23894345 | 23894181 | ID=Msa1185990-mRNA-1:cds;Parent=Msa1185990-mRNA-1 |
| chr8_1 | CDS | 23894728 | 23895034 | 23894728 | ID=Msa1185990-mRNA-1:cds;Parent=Msa1185990-mRNA-1 |
| chr8_1 | CDS | 23895165 | 23895256 | 23895165 | ID=Msa1185990-mRNA-1:cds;Parent=Msa1185990-mRNA-1 |
| chr8_1 | three_prime_UTR | 23895257 | 23895501 | 23895257 | ID=Msa1185990-mRNA-1:three_prime_utr;Parent=Msa1185990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
