AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1186510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1186510 MtrunA17_Chr8g0353031 95.979 572 23 0 1 572 1 572 0.0 1093
Msa1186510 MtrunA17_Chr3g0082631 65.665 466 156 2 100 563 9 472 0.0 608
Msa1186510 MtrunA17_Chr4g0014871 48.250 543 250 7 19 550 31 553 1.83e-175 508
Msa1186510 MtrunA17_Chr4g0014841 48.250 543 247 8 19 550 30 549 8.93e-175 506
Msa1186510 MtrunA17_Chr3g0077151 47.505 541 251 7 19 551 29 544 3.23e-174 504
Msa1186510 MtrunA17_Chr4g0014781 47.882 543 251 8 19 550 30 551 1.26e-172 500
Msa1186510 MtrunA17_Chr4g0014791 47.882 543 249 6 19 550 30 549 6.70e-171 496
Msa1186510 MtrunA17_Chr4g0014801 48.155 542 249 7 20 550 31 551 1.06e-169 493
Msa1186510 MtrunA17_Chr3g0112611 43.571 560 288 7 22 566 36 582 1.10e-164 481
Msa1186510 MtrunA17_Chr7g0240381 40.240 584 311 6 3 570 17 578 1.64e-162 476
Msa1186510 MtrunA17_Chr3g0112671 42.238 554 283 7 20 556 35 568 1.55e-160 470
Msa1186510 MtrunA17_Chr4g0008651 40.773 569 295 7 22 564 38 590 1.58e-159 468
Msa1186510 MtrunA17_Chr7g0241741 42.391 552 293 6 20 555 24 566 9.72e-158 462
Msa1186510 MtrunA17_Chr3g0104011 43.929 560 279 9 20 557 24 570 2.23e-154 454
Msa1186510 MtrunA17_Chr8g0375311 41.894 549 291 9 22 551 44 583 2.12e-146 434
Msa1186510 MtrunA17_Chr4g0005901 41.230 553 292 6 20 552 34 573 1.33e-145 432
Msa1186510 MtrunA17_Chr3g0114501 42.287 551 289 8 19 551 23 562 1.86e-144 429
Msa1186510 MtrunA17_Chr4g0014861 48.499 433 200 8 121 550 16 428 2.95e-144 423
Msa1186510 MtrunA17_Chr7g0261791 39.555 584 299 9 19 567 30 594 2.74e-141 422
Msa1186510 MtrunA17_Chr8g0375291 41.621 543 281 9 22 541 44 573 6.54e-141 420
Msa1186510 MtrunA17_Chr7g0261811 40.215 557 289 7 19 549 28 566 6.86e-141 421
Msa1186510 MtrunA17_Chr7g0261881 39.531 554 299 6 19 550 28 567 1.05e-139 417
Msa1186510 MtrunA17_Chr8g0375351 39.091 550 307 7 22 552 44 584 1.39e-138 414
Msa1186510 MtrunA17_Chr1g0187241 40.463 561 294 7 19 555 27 571 1.69e-136 409
Msa1186510 MtrunA17_Chr8g0375361 40.433 554 296 7 20 551 41 582 1.88e-136 409
Msa1186510 MtrunA17_Chr8g0375341 38.545 550 310 7 22 552 44 584 2.82e-136 408
Msa1186510 MtrunA17_Chr7g0261771 38.850 574 304 8 19 566 32 584 8.49e-136 408
Msa1186510 MtrunA17_Chr8g0375321 39.416 548 304 7 22 550 41 579 1.02e-135 407
Msa1186510 MtrunA17_Chr8g0375331 40.364 550 298 9 22 551 28 567 5.44e-134 402
Msa1186510 MtrunA17_Chr7g0261851 39.655 580 306 8 19 572 29 590 3.84e-131 395
Msa1186510 MtrunA17_Chr1g0166791 37.993 558 312 6 19 555 25 569 2.90e-129 390
Msa1186510 MtrunA17_Chr3g0142091 39.273 550 295 9 22 551 30 560 3.12e-128 387
Msa1186510 MtrunA17_Chr5g0399061 37.986 566 316 7 19 562 28 580 2.09e-127 385
Msa1186510 MtrunA17_Chr3g0142101 37.778 540 301 6 22 544 39 560 5.96e-127 384
Msa1186510 MtrunA17_Chr5g0422881 36.427 571 327 7 20 566 22 580 2.92e-126 383
Msa1186510 MtrunA17_Chr1g0166711 38.889 558 306 6 19 555 26 569 1.10e-123 376
Msa1186510 MtrunA17_Chr1g0166741 38.095 546 290 8 9 531 21 541 1.97e-123 375
Msa1186510 MtrunA17_Chr7g0255621 36.655 562 327 7 20 560 22 575 5.75e-123 375
Msa1186510 MtrunA17_Chr7g0255611 37.037 567 320 9 20 561 31 585 1.20e-122 374
Msa1186510 MtrunA17_Chr7g0255601 36.021 583 340 8 1 561 13 584 1.47e-119 366
Msa1186510 MtrunA17_Chr5g0399071 36.684 567 326 8 16 562 25 578 3.62e-119 364
Msa1186510 MtrunA17_Chr4g0056431 38.556 568 313 9 19 562 26 581 1.10e-118 363
Msa1186510 MtrunA17_Chr1g0166771 38.031 518 280 7 37 533 10 507 6.47e-118 360
Msa1186510 MtrunA17_Chr7g0217461 36.189 572 320 8 20 560 26 583 1.48e-115 355
Msa1186510 MtrunA17_Chr6g0451841 36.266 557 301 14 25 555 12 540 1.60e-114 351
Msa1186510 MtrunA17_Chr7g0261661 40.046 437 239 6 118 549 34 452 2.48e-112 344
Msa1186510 MtrunA17_Chr4g0054891 34.276 566 333 8 22 563 114 664 3.20e-110 344
Msa1186510 MtrunA17_Chr7g0214461 33.688 564 336 9 20 563 80 625 7.70e-110 342
Msa1186510 MtrunA17_Chr7g0214731 34.820 583 330 10 19 564 62 631 1.17e-109 341
Msa1186510 MtrunA17_Chr5g0400371 32.750 571 350 9 20 566 114 674 7.76e-108 338
Msa1186510 MtrunA17_Chr1g0213711 32.206 562 339 8 19 557 22 564 2.15e-107 334
Msa1186510 MtrunA17_Chr5g0415791 35.214 585 342 9 1 557 10 585 3.04e-106 332
Msa1186510 MtrunA17_Chr4g0059991 32.542 590 359 9 1 564 8 584 1.04e-104 327
Msa1186510 MtrunA17_Chr4g0059981 32.526 578 344 8 23 564 36 603 1.45e-104 327
Msa1186510 MtrunA17_Chr7g0218851 34.225 561 329 9 20 558 48 590 6.83e-103 323
Msa1186510 MtrunA17_Chr7g0240271 32.812 576 345 11 15 561 19 581 1.77e-102 321
Msa1186510 MtrunA17_Chr4g0059971 32.252 555 342 8 23 551 39 585 1.17e-100 317
Msa1186510 MtrunA17_Chr7g0261751 38.013 463 243 8 19 437 32 494 4.12e-100 313
Msa1186510 MtrunA17_Chr2g0284701 32.118 576 349 9 20 560 34 602 1.60e-99 314
Msa1186510 MtrunA17_Chr3g0133341 34.159 565 320 10 20 556 16 556 9.17e-99 311
Msa1186510 MtrunA17_Chr1g0166731 38.991 436 251 5 121 555 45 466 3.68e-97 304
Msa1186510 MtrunA17_Chr8g0379971 32.812 576 336 9 20 550 22 591 2.50e-96 306
Msa1186510 MtrunA17_Chr5g0439381 34.271 569 316 10 19 560 29 566 7.04e-96 304
Msa1186510 MtrunA17_Chr8g0362781 32.168 572 346 9 9 551 24 582 1.09e-95 303
Msa1186510 MtrunA17_Chr8g0362711 32.504 563 331 8 20 550 26 571 2.83e-95 302
Msa1186510 MtrunA17_Chr4g0069581 35.685 496 278 12 76 551 44 518 4.12e-95 301
Msa1186510 MtrunA17_Chr5g0415961 31.972 563 335 9 20 550 26 572 7.24e-95 301
Msa1186510 MtrunA17_Chr2g0276751 32.971 552 317 9 22 550 42 563 7.35e-95 301
Msa1186510 MtrunA17_Chr7g0240281 30.233 602 377 9 2 572 5 594 2.86e-93 297
Msa1186510 MtrunA17_Chr8g0390331 31.926 592 350 12 9 567 6 577 3.42e-93 297
Msa1186510 MtrunA17_Chr1g0193391 29.452 584 370 10 1 565 1 561 8.88e-93 296
Msa1186510 MtrunA17_Chr1g0147631 31.746 567 343 8 20 560 27 575 1.62e-92 295
Msa1186510 MtrunA17_Chr4g0011471 32.519 532 318 9 40 545 38 554 5.04e-92 293
Msa1186510 MtrunA17_Chr4g0063591 33.979 568 334 11 19 563 23 572 2.67e-91 292
Msa1186510 MtrunA17_Chr7g0271221 30.903 576 354 10 1 556 1 552 1.19e-89 288
Msa1186510 MtrunA17_Chr8g0379991 32.689 569 313 11 43 550 5 564 1.33e-89 287
Msa1186510 MtrunA17_Chr4g0060001 32.969 549 323 10 17 537 28 559 2.53e-89 287
Msa1186510 MtrunA17_Chr2g0331521 31.325 581 350 12 11 561 14 575 6.91e-88 283
Msa1186510 MtrunA17_Chr3g0112631 45.161 279 150 2 280 556 3 280 2.55e-87 272
Msa1186510 MtrunA17_Chr4g0011041 29.211 558 352 12 22 552 40 581 4.20e-83 270
Msa1186510 MtrunA17_Chr4g0003761 30.442 565 345 9 6 541 18 563 3.50e-82 268
Msa1186510 MtrunA17_Chr2g0326211 31.239 573 342 12 3 552 6 549 7.40e-82 266
Msa1186510 MtrunA17_Chr7g0235521 33.181 437 270 8 120 547 33 456 7.62e-82 264
Msa1186510 MtrunA17_Chr2g0331511 31.752 548 336 8 15 537 18 552 1.40e-81 268
Msa1186510 MtrunA17_Chr7g0240181 32.952 437 271 8 120 547 33 456 8.53e-81 261
Msa1186510 MtrunA17_Chr7g0240131 32.952 437 271 8 120 547 33 456 8.53e-81 261
Msa1186510 MtrunA17_Chr7g0240211 32.952 437 271 8 120 547 33 456 8.90e-81 261
Msa1186510 MtrunA17_Chr2g0331481 32.117 548 330 9 21 541 28 560 2.40e-80 265
Msa1186510 MtrunA17_Chr2g0331471 32.369 553 324 11 20 541 90 623 1.23e-79 264
Msa1186510 MtrunA17_Chr5g0415841 34.107 431 258 6 129 550 46 459 3.15e-79 257
Msa1186510 MtrunA17_Chr1g0177591 31.397 551 333 12 10 541 34 558 7.22e-78 256
Msa1186510 MtrunA17_Chr8g0362801 33.703 451 276 7 120 561 37 473 1.10e-77 253
Msa1186510 MtrunA17_Chr7g0240151 32.110 436 258 8 120 547 33 438 1.14e-74 245
Msa1186510 MtrunA17_Chr2g0331461 30.172 580 344 9 21 561 28 585 1.63e-74 249
Msa1186510 MtrunA17_Chr1g0157601 27.018 570 369 9 6 547 3 553 2.37e-74 247
Msa1186510 MtrunA17_Chr7g0261731 39.701 335 158 6 19 327 32 348 3.44e-74 240
Msa1186510 MtrunA17_Chr1g0157621 28.729 543 345 12 43 561 5 529 4.77e-71 238
Msa1186510 MtrunA17_Chr2g0325951 29.636 577 346 14 3 552 6 549 6.64e-71 237
Msa1186510 MtrunA17_Chr2g0325961 29.494 573 353 10 3 552 6 550 6.72e-71 237
Msa1186510 MtrunA17_Chr1g0157611 27.965 565 364 12 21 560 19 565 1.47e-69 234
Msa1186510 MtrunA17_Chr1g0177611 32.080 452 274 11 99 541 2 429 6.99e-68 226
Msa1186510 MtrunA17_Chr1g0177631 32.151 451 275 9 99 541 2 429 9.61e-67 223
Msa1186510 MtrunA17_Chr3g0142121 39.015 264 149 2 281 544 11 262 3.97e-65 214
Msa1186510 MtrunA17_Chr4g0060071 38.267 277 159 6 276 550 32 298 7.38e-58 196
Msa1186510 MtrunA17_Chr3g0142111 37.809 283 153 4 22 287 50 326 3.07e-54 187
Msa1186510 MtrunA17_Chr7g0261721 39.906 213 126 2 350 561 1 212 5.59e-50 172
Msa1186510 MtrunA17_Chr7g0234151 27.211 441 255 12 119 545 28 416 4.99e-46 167
Msa1186510 MtrunA17_Chr7g0234381 25.641 429 277 7 119 545 28 416 8.36e-46 166
Msa1186510 MtrunA17_Chr7g0234181 26.316 437 264 10 119 545 23 411 3.76e-45 164
Msa1186510 MtrunA17_Chr3g0112651 44.355 124 69 0 118 241 49 172 6.41e-32 122
Msa1186510 MtrunA17_Chr1g0147591 32.524 206 114 5 128 324 9 198 4.36e-29 114
Msa1186510 MtrunA17_Chr3g0112661 46.667 105 56 0 20 124 33 137 2.47e-26 104
Msa1186510 MtrunA17_Chr3g0082621 68.056 72 23 0 33 104 1 72 5.38e-26 102
Msa1186510 MtrunA17_Chr7g0261831 36.527 167 82 4 228 388 1 149 1.15e-25 105
Msa1186510 MtrunA17_Chr4g0014851 58.889 90 36 1 19 107 31 120 6.18e-25 101
Msa1186510 MtrunA17_Chr2g0326221 29.302 215 115 5 342 552 44 225 8.01e-22 94.4
Msa1186510 MtrunA17_Chr4g0060061 38.739 111 68 0 121 231 18 128 1.53e-20 87.8
Msa1186510 MtrunA17_Chr1g0166721 44.000 100 53 2 19 118 26 122 1.45e-18 82.8
Msa1186510 MtrunA17_Chr7g0261671 43.023 86 49 0 19 104 33 118 1.13e-16 76.3
Msa1186510 MtrunA17_Chr1g0147581 31.667 120 77 1 404 523 1 115 4.05e-13 66.2
Msa1186510 MtrunA17_Chr7g0240141 34.783 92 58 1 15 104 22 113 2.09e-11 61.2
Msa1186510 MtrunA17_Chr8g0362791 37.209 86 54 0 23 108 41 126 5.74e-11 60.8
Msa1186510 MtrunA17_Chr7g0240221 33.696 92 59 1 15 104 22 113 7.90e-11 59.7
Msa1186510 MtrunA17_Chr7g0240191 33.696 92 59 1 15 104 22 113 7.90e-11 59.7
Msa1186510 MtrunA17_Chr7g0240161 33.696 92 59 1 15 104 22 113 7.90e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1186510 AT3G54450.1 55.556 558 239 6 8 561 2 554 0.0 651
Msa1186510 AT1G72125.1 44.665 553 261 6 22 553 31 559 1.69e-161 473
Msa1186510 AT1G22540.1 45.389 553 258 9 19 553 29 555 7.29e-160 468
Msa1186510 AT3G53960.1 42.059 573 289 10 3 552 23 575 4.21e-159 468
Msa1186510 AT1G72120.1 44.585 554 262 9 19 553 28 555 1.57e-158 465
Msa1186510 AT2G37900.1 41.756 558 281 9 20 556 38 572 2.80e-155 457
Msa1186510 AT3G54140.1 42.315 553 292 6 20 554 24 567 1.96e-151 447
Msa1186510 AT3G54140.2 42.315 553 292 6 20 554 24 567 1.96e-151 447
Msa1186510 AT5G01180.2 41.547 556 291 8 20 554 25 567 2.10e-150 444
Msa1186510 AT5G01180.3 41.547 556 291 8 20 554 25 567 2.10e-150 444
Msa1186510 AT5G01180.1 41.547 556 291 8 20 554 25 567 2.10e-150 444
Msa1186510 AT1G22550.1 41.696 578 286 7 1 553 11 562 1.33e-149 442
Msa1186510 AT1G72140.1 42.397 559 258 8 19 551 33 553 1.28e-146 434
Msa1186510 AT1G72130.1 42.125 546 268 8 21 553 26 536 1.27e-143 426
Msa1186510 AT1G22570.1 40.830 578 292 6 1 553 11 563 2.22e-143 426
Msa1186510 AT2G02040.1 41.261 555 290 9 20 551 41 582 2.39e-141 422
Msa1186510 AT1G22570.2 41.392 546 270 6 33 553 6 526 9.94e-139 413
Msa1186510 AT2G37900.2 40.971 515 260 9 63 556 2 493 2.70e-138 411
Msa1186510 AT1G62200.1 39.677 557 295 8 17 551 49 586 3.22e-137 411
Msa1186510 AT2G40460.1 41.416 565 290 10 19 562 23 567 9.31e-135 405
Msa1186510 AT5G46040.1 39.076 563 309 5 19 561 26 574 1.04e-132 400
Msa1186510 AT5G46050.1 40.075 534 279 5 21 530 28 544 1.57e-132 399
Msa1186510 AT1G62200.2 38.382 581 298 9 17 551 49 615 6.49e-132 399
Msa1186510 AT1G62200.3 38.382 581 298 9 17 551 63 629 1.06e-131 399
Msa1186510 AT2G02020.1 37.887 549 276 7 22 552 44 545 6.82e-126 380
Msa1186510 AT1G68570.1 39.459 555 307 7 21 553 24 571 9.52e-125 379
Msa1186510 AT1G68570.2 39.483 542 299 7 34 553 7 541 2.87e-123 375
Msa1186510 AT5G14940.1 35.765 562 315 12 20 556 7 547 1.06e-115 355
Msa1186510 AT3G01350.1 35.915 568 320 10 21 559 8 560 1.19e-114 352
Msa1186510 AT5G13400.1 34.929 564 332 8 19 556 63 617 4.74e-112 347
Msa1186510 AT1G72130.2 40.183 438 223 7 118 551 14 416 2.32e-111 339
Msa1186510 AT1G72130.3 40.183 438 223 7 118 551 14 416 2.32e-111 339
Msa1186510 AT1G32450.1 33.798 574 346 10 19 566 36 601 2.93e-111 345
Msa1186510 AT1G69870.1 34.838 554 328 6 20 550 51 594 1.25e-108 338
Msa1186510 AT1G12110.1 36.282 554 323 8 19 551 26 570 1.85e-108 337
Msa1186510 AT5G46050.2 40.449 445 244 4 121 561 36 463 2.63e-107 330
Msa1186510 AT2G26690.1 35.325 569 323 11 19 562 23 571 3.72e-103 323
Msa1186510 AT1G59740.1 34.234 555 313 9 20 545 41 572 5.01e-103 323
Msa1186510 AT1G18880.1 33.392 569 340 6 23 563 22 579 1.70e-102 322
Msa1186510 AT4G21680.1 33.393 560 334 9 22 554 30 577 7.20e-102 320
Msa1186510 AT5G19640.1 32.686 566 330 11 21 564 60 596 6.32e-100 315
Msa1186510 AT2G26690.2 35.135 555 315 11 33 562 4 538 2.91e-99 312
Msa1186510 AT1G69850.1 34.452 566 325 10 20 550 25 579 6.87e-98 310
Msa1186510 AT1G52190.1 32.465 576 338 10 1 541 1 560 9.53e-97 307
Msa1186510 AT1G27040.1 35.572 551 317 9 20 549 27 560 1.09e-96 306
Msa1186510 AT1G27040.2 35.572 551 317 9 20 549 23 556 1.19e-96 306
Msa1186510 AT2G26690.3 35.229 545 308 11 43 562 2 526 1.23e-96 305
Msa1186510 AT1G33440.1 35.443 553 301 13 19 542 37 562 1.77e-96 306
Msa1186510 AT3G16180.1 32.392 602 350 10 1 561 1 586 7.60e-94 299
Msa1186510 AT1G27040.3 35.502 538 309 9 33 549 8 528 9.11e-94 297
Msa1186510 AT3G21670.1 34.938 561 306 13 19 550 28 558 3.64e-93 297
Msa1186510 AT5G62680.1 31.524 571 345 11 23 561 46 602 1.16e-88 286
Msa1186510 AT1G27080.1 31.524 571 341 10 20 563 14 561 9.64e-88 283
Msa1186510 AT5G62730.1 33.031 551 336 12 20 554 56 589 9.73e-88 283
Msa1186510 AT5G62730.2 33.028 545 332 12 26 554 3 530 1.22e-86 278
Msa1186510 AT5G28470.2 31.250 560 340 11 2 537 5 543 5.27e-86 278
Msa1186510 AT3G47960.1 29.643 560 359 7 23 556 64 614 7.41e-85 277
Msa1186510 AT5G28470.1 31.071 560 339 12 2 537 5 541 4.43e-83 270
Msa1186510 AT1G69860.1 30.070 572 357 8 7 556 5 555 9.71e-82 266
Msa1186510 AT3G45660.1 31.414 573 327 14 17 559 18 554 3.12e-81 265
Msa1186510 AT3G45660.3 31.414 573 327 14 17 559 18 554 3.12e-81 265
Msa1186510 AT3G45660.2 31.414 573 327 14 17 559 39 575 6.29e-81 265
Msa1186510 AT1G27080.2 31.296 540 321 10 51 563 3 519 7.06e-81 263
Msa1186510 AT3G45650.1 30.637 581 346 13 1 556 1 549 6.31e-80 262
Msa1186510 AT3G45720.1 30.087 575 329 12 19 561 18 551 1.24e-76 253
Msa1186510 AT3G45680.1 28.183 589 365 12 1 564 1 556 6.09e-76 251
Msa1186510 AT3G45700.1 28.696 575 354 11 1 556 1 538 4.83e-75 249
Msa1186510 AT3G45650.2 29.325 607 346 14 1 556 1 575 2.39e-74 248
Msa1186510 AT3G25260.1 29.889 542 315 10 20 545 21 513 3.12e-74 246
Msa1186510 AT3G45710.1 27.551 588 364 12 1 560 1 554 8.17e-74 246
Msa1186510 AT3G25280.1 28.386 539 333 9 20 545 21 519 9.38e-68 229
Msa1186510 AT3G45690.1 26.549 565 324 12 18 561 16 510 2.55e-63 217
Msa1186510 AT2G38100.2 28.814 531 325 15 48 561 2 496 4.35e-56 197
Msa1186510 AT2G38100.3 28.814 531 325 15 48 561 24 518 7.84e-56 197
Msa1186510 AT2G38100.1 28.814 531 325 15 48 561 18 512 8.90e-56 196
Msa1186510 AT2G02020.2 35.395 291 171 1 22 295 44 334 7.01e-51 183
Msa1186510 AT2G02020.2 39.726 219 127 4 335 552 310 524 3.85e-46 170
Msa1186510 AT5G11570.1 25.853 557 309 14 11 547 4 476 9.54e-45 165

Find 145 sgRNAs with CRISPR-Local

Find 402 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAGTACTATGTTTGGATTT+TGG 0.145938 8_1:+24913740 None:intergenic
AAAGGAGCATTACTAGAAAT+TGG 0.198498 8_1:+24913778 None:intergenic
CACACCTTGATGATTATTAT+TGG 0.205565 8_1:-24907491 Msa1186510:CDS
TGTGTTAAGTGCTGTTAATT+TGG 0.220123 8_1:-24907460 Msa1186510:CDS
CCATCACTCCACAACCAAAA+AGG 0.253088 8_1:-24913553 Msa1186510:CDS
CAATACTACCGATGTATATT+TGG 0.262174 8_1:-24907743 Msa1186510:CDS
GGCATTGGCACTCTTCCTAT+TGG 0.263753 8_1:-24909353 Msa1186510:CDS
AGGATGTTTGGGTCTTATAT+AGG 0.278963 8_1:+24913707 None:intergenic
TGCAACACGGTTATCCCATT+TGG 0.279245 8_1:+24907879 None:intergenic
GTCTTATATAGGGAAAATTA+TGG 0.289839 8_1:+24913718 None:intergenic
TGGAGCAAAGTATGATATTT+AGG 0.291619 8_1:+24909160 None:intergenic
GTTGGGTGGGGTGTGGGGTT+AGG 0.297522 8_1:-24909400 Msa1186510:CDS
TCTCTTAGTTATGGTCATAT+TGG 0.298682 8_1:+24913829 None:intergenic
ACTTGGGCCAGTCTTGTAAA+TGG 0.307105 8_1:+24909292 None:intergenic
GGACAATGTTGGGTGGGGTG+TGG 0.309070 8_1:-24909407 Msa1186510:CDS
CTCTTTCTATCTCTTAGTTA+TGG 0.309462 8_1:+24913820 None:intergenic
GACAATGTTGGGTGGGGTGT+GGG 0.321840 8_1:-24909406 Msa1186510:CDS
TTCATAGCTGATTCATATCT+TGG 0.330954 8_1:-24913179 Msa1186510:CDS
GTGTTAAGTGCTGTTAATTT+GGG 0.332355 8_1:-24907459 Msa1186510:CDS
CTCTTAGCATCCTTCTCTTC+CGG 0.334697 8_1:+24911202 None:intergenic
ACGAAGACTCGGTCGTATAT+TGG 0.344839 8_1:+24907930 None:intergenic
AAGGAGCATTACTAGAAATT+GGG 0.344987 8_1:+24913779 None:intergenic
AAGTTTGAACACAAGGCTTA+TGG 0.351768 8_1:+24911254 None:intergenic
ACACCTTGATGATTATTATT+GGG 0.352520 8_1:-24907490 Msa1186510:CDS
GATTAATGTGCCACCTTGTT+TGG 0.353072 8_1:+24908031 None:intergenic
GGATGTTTGGGTCTTATATA+GGG 0.358242 8_1:+24913708 None:intergenic
TGATGATTATTATTGGGTTA+TGG 0.358619 8_1:-24907484 Msa1186510:CDS
TAAGAACATGATTGTTACTT+TGG 0.360556 8_1:-24907194 Msa1186510:three_prime_UTR
GGTTGGGAGATAACATCAAT+AGG 0.363887 8_1:-24907515 Msa1186510:CDS
CCCACCTATATTGATTTGTA+TGG 0.364822 8_1:+24909140 None:intergenic
GCATTGGCACTCTTCCTATT+GGG 0.365353 8_1:-24909352 Msa1186510:CDS
TCCTCACTATTCCCTTTGCT+TGG 0.365982 8_1:-24913206 Msa1186510:CDS
GCCGGACGGACTGAGAAGTT+TGG 0.368505 8_1:-24907637 Msa1186510:CDS
AATTATGGGAGTACTATGTT+TGG 0.371072 8_1:+24913733 None:intergenic
TTGGGCTATCTGCCATGATT+TGG 0.371956 8_1:+24913601 None:intergenic
ACAATGTTGGGTGGGGTGTG+GGG 0.374470 8_1:-24909405 Msa1186510:CDS
GCAACACGGTTATCCCATTT+GGG 0.378471 8_1:+24907880 None:intergenic
AGAAGTAACCAAGAGGGTTC+TGG 0.380275 8_1:-24907381 Msa1186510:CDS
TAGTTTACCTGAAGATATAC+TGG 0.387756 8_1:+24911118 None:intergenic
TGGTACTTGGGCATTGTGGC+TGG 0.394291 8_1:-24911163 Msa1186510:CDS
TATACTCACAATGGTTGTTT+CGG 0.398118 8_1:-24907829 Msa1186510:CDS
CATCTTTCTCCTCTTCACTA+TGG 0.400638 8_1:+24909206 None:intergenic
TTCCCTCCAGCATCACTTCA+AGG 0.400965 8_1:-24907984 Msa1186510:CDS
GTCTTCACTCATTTATCTTG+TGG 0.402311 8_1:-24913135 Msa1186510:intron
ATTAAACAAGTTAGCCATAC+AGG 0.402683 8_1:+24908092 None:intergenic
GGGTGTGGGGTTAGGAGTAT+TGG 0.406293 8_1:-24909392 Msa1186510:CDS
TACAGAAAGGAAAGCCCTAC+AGG 0.407761 8_1:-24909319 Msa1186510:CDS
CGGCTCTTGTAGAAACGAAA+AGG 0.407993 8_1:-24907809 Msa1186510:CDS
CCGGACGGACTGAGAAGTTT+GGG 0.413910 8_1:-24907636 Msa1186510:CDS
GGCTATCTGCCATGATTTGG+TGG 0.414389 8_1:+24913604 None:intergenic
TCACTATTCCCTTTGCTTGG+TGG 0.418464 8_1:-24913203 Msa1186510:CDS
AATTATAGTAGCATTATCTA+TGG 0.422696 8_1:+24907303 None:intergenic
CGTGTCGTCGTCGAACTGAT+TGG 0.423639 8_1:+24911225 None:intergenic
AAATTCACCGGTCACCCAAA+TGG 0.425786 8_1:-24907894 Msa1186510:CDS
AATGAGTGAAGACAAGAGTA+TGG 0.428043 8_1:+24913145 None:intergenic
GAGATTTGCATACCAAGGTT+TGG 0.431626 8_1:-24913315 Msa1186510:CDS
TGGGGTGTGGGGATGAGAAA+AGG 0.434894 8_1:+24913760 None:intergenic
TATATAAGTATAGTAGGAGT+TGG 0.438611 8_1:-24907603 Msa1186510:CDS
TCTGATGCGTTTACTATCGT+TGG 0.439738 8_1:-24907687 Msa1186510:CDS
GCACTTTATGTGCTTTCCAT+TGG 0.444806 8_1:-24911286 Msa1186510:CDS
TTAATTTGGGTGTTTATATG+TGG 0.449648 8_1:-24907446 Msa1186510:CDS
AGGAGTGTTGGCATTGGCAT+TGG 0.457677 8_1:-24909368 Msa1186510:CDS
GGCTACAATAGATATCGTTC+TGG 0.462037 8_1:-24907360 Msa1186510:CDS
TGCTCCATACAAATCAATAT+AGG 0.469329 8_1:-24909144 Msa1186510:intron
GTTTATACCAGTATATCTTC+AGG 0.469782 8_1:-24911125 Msa1186510:intron
AATTCACCGGTCACCCAAAT+GGG 0.480800 8_1:-24907893 Msa1186510:CDS
TTGTCGCCGCAGCTCGCAAG+TGG 0.488259 8_1:-24909267 Msa1186510:CDS
GGTTATCCCATTTGGGTGAC+CGG 0.488655 8_1:+24907887 None:intergenic
TAGCAAGTGGCACGAAGACT+CGG 0.490850 8_1:+24907919 None:intergenic
GCGGCGTATATAAGTATAGT+AGG 0.493249 8_1:-24907609 Msa1186510:CDS
GGCTCTTGTAGAAACGAAAA+GGG 0.495860 8_1:-24907808 Msa1186510:CDS
GGTTGTGGAGTGATGGATGA+GGG 0.501318 8_1:+24913560 None:intergenic
TATTGTAGCCAGAACCCTCT+TGG 0.501499 8_1:+24907373 None:intergenic
ACGAGGCCTTGAAGTGATGC+TGG 0.507942 8_1:+24907978 None:intergenic
AGGAGTATTGGCAGGAGTGT+TGG 0.511573 8_1:-24909380 Msa1186510:CDS
TCTTATATAGGGAAAATTAT+GGG 0.512640 8_1:+24913719 None:intergenic
CACGCGCCACTTGCGAGCTG+CGG 0.524318 8_1:+24909261 None:intergenic
CTTGTAAATGGACTCCCTGT+AGG 0.524715 8_1:+24909304 None:intergenic
CGTATATTGGAACAACGAAA+AGG 0.524827 8_1:+24907943 None:intergenic
CAAAACTCACCACCAAATCA+TGG 0.526335 8_1:-24913613 Msa1186510:exon
CATTATAATTGAAGTTGTTG+AGG 0.528014 8_1:-24907565 Msa1186510:CDS
TGGTTGTGGAGTGATGGATG+AGG 0.528098 8_1:+24913559 None:intergenic
TCTTCCTATTGGGAATCAAA+AGG 0.529313 8_1:-24909342 Msa1186510:CDS
GTGCAAAAGCTGGTGAGAAA+TGG 0.533099 8_1:-24907536 Msa1186510:CDS
TACTACCGATGTATATTTGG+TGG 0.535981 8_1:-24907740 Msa1186510:CDS
CCCAAACTTCTCAGTCCGTC+CGG 0.536644 8_1:+24907636 None:intergenic
CGACGACACGCCGGAAGAGA+AGG 0.536664 8_1:-24911212 Msa1186510:CDS
TTCTTCGTCTAATCCCTGTA+TGG 0.537187 8_1:-24908106 Msa1186510:CDS
AGGAGCATTACTAGAAATTG+GGG 0.540093 8_1:+24913780 None:intergenic
TAACCCAATAATAATCATCA+AGG 0.540319 8_1:+24907487 None:intergenic
CTATGAAGCCACCAAGCAAA+GGG 0.542359 8_1:+24913195 None:intergenic
TTTCTTGACACTTTCAGTGT+CGG 0.543156 8_1:-24911338 Msa1186510:CDS
AGTAGCATTATCTATGGCAA+AGG 0.544789 8_1:+24907309 None:intergenic
ATAACCGTGTTGCAAAGAAT+CGG 0.549285 8_1:-24907870 Msa1186510:CDS
GTGCTTTCCATTGGTGAAGG+AGG 0.549336 8_1:-24911277 Msa1186510:CDS
TTGTAAATGGACTCCCTGTA+GGG 0.551151 8_1:+24909305 None:intergenic
GTCGTCGTCGAACTGATTGG+CGG 0.553261 8_1:+24911228 None:intergenic
AGGGAGTCCATTTACAAGAC+TGG 0.553305 8_1:-24909299 Msa1186510:CDS
AATTCAGGACAATGTTGGGT+GGG 0.554992 8_1:-24909413 Msa1186510:intron
TATGTGCTTTCCATTGGTGA+AGG 0.555245 8_1:-24911280 Msa1186510:CDS
GAACTTACATATGATGAAGA+TGG 0.559904 8_1:+24913515 None:intergenic
CAAACAAAACAAGAAATCCA+TGG 0.560424 8_1:-24908169 Msa1186510:CDS
ATTGGCAGGAGTGTTGGCAT+TGG 0.560470 8_1:-24909374 Msa1186510:CDS
CACACATATTTCACCAAACA+AGG 0.565863 8_1:-24908044 Msa1186510:CDS
GTTGGGAGATAACATCAATA+GGG 0.567469 8_1:-24907514 Msa1186510:CDS
TGAGATTTGATGCCAAACCT+TGG 0.567641 8_1:+24913303 None:intergenic
GTCACTGAACATAATCTCCA+TGG 0.569399 8_1:+24908152 None:intergenic
AGTAAACGCATCAGAGATGC+CGG 0.575326 8_1:+24907695 None:intergenic
GCTATGAAGCCACCAAGCAA+AGG 0.578420 8_1:+24913194 None:intergenic
GGGAATCAAAAGGTACAGAA+AGG 0.580406 8_1:-24909332 Msa1186510:CDS
CTTCCTCAATATATGATCAC+CGG 0.580732 8_1:-24907714 Msa1186510:CDS
ATTCAGGACAATGTTGGGTG+GGG 0.582595 8_1:-24909412 Msa1186510:intron
GCGGCGAAAGTTTGAACACA+AGG 0.586189 8_1:+24911247 None:intergenic
GCTGAGAGATTTGCATACCA+AGG 0.590021 8_1:-24913320 Msa1186510:CDS
TTAAACAAGTTAGCCATACA+GGG 0.590363 8_1:+24908093 None:intergenic
AAAGCTGGTGAGAAATGGTT+GGG 0.591814 8_1:-24907531 Msa1186510:CDS
GGCCTTGAAGTGATGCTGGA+GGG 0.597498 8_1:+24907982 None:intergenic
GTGTTGCAAAGAATCGGAGT+TGG 0.599308 8_1:-24907864 Msa1186510:CDS
CTTATGGCCTCCTTCACCAA+TGG 0.600332 8_1:+24911270 None:intergenic
GTGGGGTTAGGAGTATTGGC+AGG 0.603352 8_1:-24909388 Msa1186510:CDS
ATGCCGGTGATCATATATTG+AGG 0.604323 8_1:+24907711 None:intergenic
GTTAATGTTGCTAAAAGTCA+CGG 0.605449 8_1:-24907786 Msa1186510:CDS
AAATTCAGGACAATGTTGGG+TGG 0.606854 8_1:-24909414 Msa1186510:intron
AACTCCGATTCTTTGCAACA+CGG 0.606929 8_1:+24907866 None:intergenic
AGGCCTTGAAGTGATGCTGG+AGG 0.615708 8_1:+24907981 None:intergenic
AAAAGCTGGTGAGAAATGGT+TGG 0.619989 8_1:-24907532 Msa1186510:CDS
ACTGAGAAGTTTGGGAGCCG+CGG 0.621017 8_1:-24907628 Msa1186510:CDS
TTCTGGAGTGTAGTAAAACA+AGG 0.625507 8_1:-24907343 Msa1186510:exon
TTTAGTGATGATAATGTTGG+GGG 0.628840 8_1:+24913667 None:intergenic
GGTCGAACATGAACATGATG+AGG 0.633947 8_1:+24909181 None:intergenic
ACAGAAAGGAAAGCCCTACA+GGG 0.634031 8_1:-24909318 Msa1186510:CDS
CCACTTGCTAGAAAATTCAC+CGG 0.636988 8_1:-24907906 Msa1186510:CDS
AACTAAGAGATAGAAAGAGA+AGG 0.637674 8_1:-24913816 Msa1186510:five_prime_UTR
TTGGTGGTACTTGGGCATTG+TGG 0.645431 8_1:-24911167 Msa1186510:CDS
GAGGCAATTAGTGCAAAAGC+TGG 0.647395 8_1:-24907546 Msa1186510:CDS
GGCACATTAATCCATACCCT+AGG 0.652827 8_1:-24908020 Msa1186510:CDS
GATGAAAGAAGTAACCAAGA+GGG 0.661163 8_1:-24907387 Msa1186510:CDS
GCATCACTTCAAGGCCTCGT+CGG 0.670950 8_1:-24907975 Msa1186510:CDS
TCAGTTCGACGACGACACGC+CGG 0.672280 8_1:-24911221 Msa1186510:CDS
ACCAAGCAAAGGGAATAGTG+AGG 0.678777 8_1:+24913205 None:intergenic
AGTAACCACCAAATATACAT+CGG 0.684698 8_1:+24907735 None:intergenic
AGATGAAAGAAGTAACCAAG+AGG 0.693348 8_1:-24907388 Msa1186510:CDS
ACATATTTCACCAAACAAGG+TGG 0.708994 8_1:-24908041 Msa1186510:CDS
TACTATACTTATATACGCCG+CGG 0.710647 8_1:+24907611 None:intergenic
AAAGGATCGTGACTCCGACG+AGG 0.738339 8_1:+24907961 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTATATGATATAATATTAAA+AGG + chr8_1:24907676-24907695 None:intergenic 10.0%
!! AAAATTATATGGTTTAATTA+GGG + chr8_1:24909127-24909146 None:intergenic 10.0%
!! AAAAATTATATGGTTTAATT+AGG + chr8_1:24909128-24909147 None:intergenic 10.0%
!!! TTATTTTATTAGTTGAAATT+TGG + chr8_1:24911409-24911428 None:intergenic 10.0%
!!! ATAAATAAATAGTTTTGATT+GGG + chr8_1:24912327-24912346 None:intergenic 10.0%
!! ATAATCGAATTAAATATATA+TGG + chr8_1:24912471-24912490 None:intergenic 10.0%
!! GATCAATTATATAATGAAAA+GGG + chr8_1:24907551-24907570 None:intergenic 15.0%
!! TGATCAATTATATAATGAAA+AGG + chr8_1:24907552-24907571 None:intergenic 15.0%
!! CAATTACATGATTAAAAAAT+GGG + chr8_1:24907645-24907664 None:intergenic 15.0%
!! TCAATTACATGATTAAAAAA+TGG + chr8_1:24907646-24907665 None:intergenic 15.0%
!! AATATTATATCATATAGTTG+TGG - chr8_1:24907679-24907698 Msa1186510:CDS 15.0%
!! AGGTTAAAAATTAAGTATAA+AGG + chr8_1:24908975-24908994 None:intergenic 15.0%
!! AAAAATATTCTTAATTGAAG+GGG + chr8_1:24909038-24909057 None:intergenic 15.0%
!! CAAAAATATTCTTAATTGAA+GGG + chr8_1:24909039-24909058 None:intergenic 15.0%
!! TCAAAAATATTCTTAATTGA+AGG + chr8_1:24909040-24909059 None:intergenic 15.0%
!! AGAAAATATGATATTATGAT+GGG + chr8_1:24909408-24909427 None:intergenic 15.0%
!! AAGAAAATATGATATTATGA+TGG + chr8_1:24909409-24909428 None:intergenic 15.0%
!! AAAAATTATTCACATAAAGT+TGG + chr8_1:24909435-24909454 None:intergenic 15.0%
!! CAAAGAATTTCTTTATATTA+AGG + chr8_1:24910532-24910551 None:intergenic 15.0%
!!! ACAAATTAAGTTGTTTATTA+CGG + chr8_1:24910566-24910585 None:intergenic 15.0%
!!! AAGTTTTTTACATTTTTTTC+TGG - chr8_1:24910848-24910867 Msa1186510:intron 15.0%
!! AAAGTAATTAACAAAATGAT+TGG - chr8_1:24911021-24911040 Msa1186510:intron 15.0%
!!! GATTTTTATTTATAAAAGAC+TGG - chr8_1:24911077-24911096 Msa1186510:intron 15.0%
!! ATGTATGATTCTAATTATAA+TGG - chr8_1:24911549-24911568 Msa1186510:intron 15.0%
!!! TAATTTAAAGTTAGAAAGAA+TGG + chr8_1:24911915-24911934 None:intergenic 15.0%
!! TGAAATGAATATATTAACAA+AGG + chr8_1:24911939-24911958 None:intergenic 15.0%
!!! CATAAATAAATAGTTTTGAT+TGG + chr8_1:24912328-24912347 None:intergenic 15.0%
!! CATATAAAAATTTGATGAAT+TGG + chr8_1:24912436-24912455 None:intergenic 15.0%
!!! CAATTCATCAAATTTTTATA+TGG - chr8_1:24912434-24912453 Msa1186510:intron 15.0%
!!! TTAATAGGTTAATTTGTTTA+TGG - chr8_1:24912622-24912641 Msa1186510:intron 15.0%
!!! TAATAGGTTAATTTGTTTAT+GGG - chr8_1:24912623-24912642 Msa1186510:intron 15.0%
!! TCTTATATAGGGAAAATTAT+GGG + chr8_1:24907311-24907330 None:intergenic 20.0%
!!! TTTTTAGTGATGATAATGTT+GGG + chr8_1:24907365-24907384 None:intergenic 20.0%
!!! ATTTTTAGTGATGATAATGT+TGG + chr8_1:24907366-24907385 None:intergenic 20.0%
!! TTTAATCATGTAATTGACTA+TGG - chr8_1:24907649-24907668 Msa1186510:CDS 20.0%
!!! TTGATAATTTATACATAGAG+CGG - chr8_1:24908030-24908049 Msa1186510:CDS 20.0%
!!! TTTGTATCGTTCAATTTTAT+AGG - chr8_1:24908202-24908221 Msa1186510:CDS 20.0%
!!! GGAGTTTTATTATAATGAAT+GGG - chr8_1:24908358-24908377 Msa1186510:intron 20.0%
!!! GAGTTTTATTATAATGAATG+GGG - chr8_1:24908359-24908378 Msa1186510:intron 20.0%
!!! TTAAAGGGACAATTATTTTA+AGG + chr8_1:24908681-24908700 None:intergenic 20.0%
!!! TGTTGTCTTGATATTTTAAA+GGG + chr8_1:24908696-24908715 None:intergenic 20.0%
!!! ATGTTGTCTTGATATTTTAA+AGG + chr8_1:24908697-24908716 None:intergenic 20.0%
!! TAGTTGACCAAAATAAATAA+AGG + chr8_1:24908902-24908921 None:intergenic 20.0%
!! TTCCAAATAATTTCAAATCT+AGG - chr8_1:24908936-24908955 Msa1186510:intron 20.0%
!!! ATCCTAGATTTGAAATTATT+TGG + chr8_1:24908941-24908960 None:intergenic 20.0%
!! TCCCATATATTAATTAAGTT+GGG + chr8_1:24909152-24909171 None:intergenic 20.0%
!! TTCCCATATATTAATTAAGT+TGG + chr8_1:24909153-24909172 None:intergenic 20.0%
!!! GATAACTTTTGAAACTTTTA+AGG + chr8_1:24909253-24909272 None:intergenic 20.0%
!!! TATTGACTTATATAATAGAG+AGG - chr8_1:24910160-24910179 Msa1186510:intron 20.0%
!! ATTGTAAAAGTTAGTGTATA+TGG + chr8_1:24910199-24910218 None:intergenic 20.0%
!!! GAATCAAATTTTCTTAATTG+TGG - chr8_1:24910296-24910315 Msa1186510:intron 20.0%
!! TTTCTAAATCTTTATCTACA+AGG + chr8_1:24910470-24910489 None:intergenic 20.0%
!! TATGAAAATATCTTACGATA+TGG + chr8_1:24910756-24910775 None:intergenic 20.0%
!!! TTATCAGTCACTTTTTTTTT+TGG - chr8_1:24910934-24910953 Msa1186510:intron 20.0%
!! ATATATGTGACAAAAAATTC+AGG - chr8_1:24911599-24911618 Msa1186510:intron 20.0%
!!! TACTTTTGAAAAGAAAATTG+AGG - chr8_1:24912094-24912113 Msa1186510:intron 20.0%
!! AAAGAAAATTGAGGATTATT+AGG - chr8_1:24912103-24912122 Msa1186510:intron 20.0%
!!! TCATCAAATTTTTATATGGT+AGG - chr8_1:24912438-24912457 Msa1186510:intron 20.0%
!!! TAAGAATATGCTTTTTAGTA+TGG + chr8_1:24912761-24912780 None:intergenic 20.0%
!!! ATACTAAAAAGCATATTCTT+AGG - chr8_1:24912760-24912779 Msa1186510:intron 20.0%
!!! AATAATTTGCAACAGATTTT+TGG - chr8_1:24912802-24912821 Msa1186510:intron 20.0%
!!! ATTTTTATCTATACTCACAA+TGG - chr8_1:24913189-24913208 Msa1186510:CDS 20.0%
!!! AATTTTTTATGATCAAATGC+CGG - chr8_1:24913372-24913391 Msa1186510:intron 20.0%
!!! AAAGTGTTTTGAGTATAAAA+AGG - chr8_1:24913609-24913628 Msa1186510:exon 20.0%
!! AATTATAGTAGCATTATCTA+TGG + chr8_1:24913727-24913746 None:intergenic 20.0%
! GTCTTATATAGGGAAAATTA+TGG + chr8_1:24907312-24907331 None:intergenic 25.0%
!!! TTTTAGTGATGATAATGTTG+GGG + chr8_1:24907364-24907383 None:intergenic 25.0%
! AGGAAAGAATAATAATTGAG+GGG + chr8_1:24907608-24907627 None:intergenic 25.0%
! GAGGAAAGAATAATAATTGA+GGG + chr8_1:24907609-24907628 None:intergenic 25.0%
! TCACATTATATAGACATTAG+CGG + chr8_1:24908082-24908101 None:intergenic 25.0%
! ATACAAACAAGATTAGCATA+AGG + chr8_1:24908189-24908208 None:intergenic 25.0%
!!! CAATTTATAGCTTTAGTTCA+TGG - chr8_1:24908266-24908285 Msa1186510:intron 25.0%
!!! CGGAGTTTTATTATAATGAA+TGG - chr8_1:24908357-24908376 Msa1186510:intron 25.0%
! TTGTATAGGATTTGGATTTA+CGG + chr8_1:24908408-24908427 None:intergenic 25.0%
! CATTATTGTTGTATAGGATT+TGG + chr8_1:24908416-24908435 None:intergenic 25.0%
! AATCCTATACAACAATAATG+TGG - chr8_1:24908416-24908435 Msa1186510:intron 25.0%
! AGAGAGAGAAAGAAAATAAA+GGG + chr8_1:24908471-24908490 None:intergenic 25.0%
! AAGAGAGAGAAAGAAAATAA+AGG + chr8_1:24908472-24908491 None:intergenic 25.0%
!! ATTAAAGGCACATAATAGTT+CGG + chr8_1:24908820-24908839 None:intergenic 25.0%
! GTGACAGTTATTAATAAAGT+TGG + chr8_1:24908852-24908871 None:intergenic 25.0%
!!! ATGCACTCCTTTATTTATTT+TGG - chr8_1:24908892-24908911 Msa1186510:intron 25.0%
!! TAAGTTGGGGAAAAATTATA+TGG + chr8_1:24909138-24909157 None:intergenic 25.0%
! TCCCCAACTTAATTAATATA+TGG - chr8_1:24909147-24909166 Msa1186510:CDS 25.0%
!! CCCATATATTAATTAAGTTG+GGG + chr8_1:24909151-24909170 None:intergenic 25.0%
! CCCCAACTTAATTAATATAT+GGG - chr8_1:24909148-24909167 Msa1186510:CDS 25.0%
! ATAAGTTAAGAAACCAAATG+TGG - chr8_1:24909196-24909215 Msa1186510:CDS 25.0%
! CAAGAAAAAATTTCCACATT+TGG + chr8_1:24909212-24909231 None:intergenic 25.0%
!!! CAAATGTGGAAATTTTTTCT+TGG - chr8_1:24909210-24909229 Msa1186510:CDS 25.0%
! CAAATCTTGAAATGGAATAT+TGG + chr8_1:24909515-24909534 None:intergenic 25.0%
! GACAAATAATATACAGGAAT+AGG + chr8_1:24909545-24909564 None:intergenic 25.0%
! AATGAGGACAAATAATATAC+AGG + chr8_1:24909551-24909570 None:intergenic 25.0%
!!! CAAAATTTTGCTTTAGCTTA+TGG - chr8_1:24909620-24909639 Msa1186510:intron 25.0%
!!! CTAAGAGTTCATTTTTCAAT+TGG - chr8_1:24909841-24909860 Msa1186510:intron 25.0%
! TTTAGAGAAAAAACAAGACA+AGG - chr8_1:24910081-24910100 Msa1186510:intron 25.0%
! TTAGAGAAAAAACAAGACAA+GGG - chr8_1:24910082-24910101 Msa1186510:intron 25.0%
! AAAAGTTAGTGTATATGGTA+GGG + chr8_1:24910194-24910213 None:intergenic 25.0%
! TAAAAGTTAGTGTATATGGT+AGG + chr8_1:24910195-24910214 None:intergenic 25.0%
! TAAAGAATTTCTGATCAGTT+TGG + chr8_1:24910493-24910512 None:intergenic 25.0%
! TTGTTTATTACGGAGTTTAT+TGG + chr8_1:24910556-24910575 None:intergenic 25.0%
!! TAAAAAACTTAGAGCTTGTT+TGG + chr8_1:24910838-24910857 None:intergenic 25.0%
!! CAATAGAACTCAATTACTTT+TGG + chr8_1:24910874-24910893 None:intergenic 25.0%
! ATCAATATTTGATTCTGCAT+TGG + chr8_1:24911060-24911079 None:intergenic 25.0%
! TAATTGGAAAATTAGGTGAA+TGG - chr8_1:24911325-24911344 Msa1186510:CDS 25.0%
! AAAAAATTCAGGACAATGTT+GGG - chr8_1:24911610-24911629 Msa1186510:intron 25.0%
! AGTGAAAGACAAGTTATATA+TGG - chr8_1:24912181-24912200 Msa1186510:intron 25.0%
! TTTACCCATTGATAAAAAGT+CGG - chr8_1:24912278-24912297 Msa1186510:intron 25.0%
! GAATTAAATATATATGGCGT+AGG + chr8_1:24912465-24912484 None:intergenic 25.0%
!! TGTTTGATGATAAATGTTAG+AGG - chr8_1:24912552-24912571 Msa1186510:intron 25.0%
!!! GAATTGAAATTTTGATCCTA+GGG + chr8_1:24913026-24913045 None:intergenic 25.0%
! TATATAAGTATAGTAGGAGT+TGG - chr8_1:24913424-24913443 Msa1186510:intron 25.0%
! CATTATAATTGAAGTTGTTG+AGG - chr8_1:24913462-24913481 Msa1186510:intron 25.0%
!! ACACCTTGATGATTATTATT+GGG - chr8_1:24913537-24913556 Msa1186510:CDS 25.0%
! TAACCCAATAATAATCATCA+AGG + chr8_1:24913543-24913562 None:intergenic 25.0%
! TGATGATTATTATTGGGTTA+TGG - chr8_1:24913543-24913562 Msa1186510:CDS 25.0%
!! TTAATTTGGGTGTTTATATG+TGG - chr8_1:24913581-24913600 Msa1186510:CDS 25.0%
! TTTGAGTATAAAAAGGTAGA+TGG - chr8_1:24913616-24913635 Msa1186510:exon 25.0%
!! TAAGAACATGATTGTTACTT+TGG - chr8_1:24913833-24913852 Msa1186510:five_prime_UTR 25.0%
TCTCTTAGTTATGGTCATAT+TGG + chr8_1:24907201-24907220 None:intergenic 30.0%
CTCTTTCTATCTCTTAGTTA+TGG + chr8_1:24907210-24907229 None:intergenic 30.0%
AACTAAGAGATAGAAAGAGA+AGG - chr8_1:24907211-24907230 Msa1186510:three_prime_UTR 30.0%
!!! TAGAAATTGGGGTTTTGATT+TGG + chr8_1:24907239-24907258 None:intergenic 30.0%
!! AAGGAGCATTACTAGAAATT+GGG + chr8_1:24907251-24907270 None:intergenic 30.0%
!! AAAGGAGCATTACTAGAAAT+TGG + chr8_1:24907252-24907271 None:intergenic 30.0%
! AGTACTATGTTTGGATTTTG+GGG + chr8_1:24907288-24907307 None:intergenic 30.0%
! GAGTACTATGTTTGGATTTT+GGG + chr8_1:24907289-24907308 None:intergenic 30.0%
!! AATTATGGGAGTACTATGTT+TGG + chr8_1:24907297-24907316 None:intergenic 30.0%
! TTTAGTGATGATAATGTTGG+GGG + chr8_1:24907363-24907382 None:intergenic 30.0%
!! TTTTGTTTAGGATGATGAGT+TGG + chr8_1:24907399-24907418 None:intergenic 30.0%
GAACTTACATATGATGAAGA+TGG + chr8_1:24907515-24907534 None:intergenic 30.0%
GGAAAGAATAATAATTGAGG+GGG + chr8_1:24907607-24907626 None:intergenic 30.0%
GGAGGAAAGAATAATAATTG+AGG + chr8_1:24907610-24907629 None:intergenic 30.0%
CATGATTAAAAAATGGGTGT+TGG + chr8_1:24907639-24907658 None:intergenic 30.0%
! GTTCATTCAGAAATTTTGTG+AGG + chr8_1:24907757-24907776 None:intergenic 30.0%
! TTCATAGCTGATTCATATCT+TGG - chr8_1:24907848-24907867 Msa1186510:CDS 30.0%
TTTATACATAGAGCGGAAAA+CGG - chr8_1:24908037-24908056 Msa1186510:CDS 30.0%
ATATAGACATTAGCGGAAAA+CGG + chr8_1:24908075-24908094 None:intergenic 30.0%
ACAAGATTAGCATAAGGTAA+AGG + chr8_1:24908183-24908202 None:intergenic 30.0%
CAACCACATTATTGTTGTAT+AGG + chr8_1:24908422-24908441 None:intergenic 30.0%
AAGTTCCTTAAAGAATGATC+CGG - chr8_1:24908740-24908759 Msa1186510:intron 30.0%
! TTGCTCACTTTAAAGATACA+GGG - chr8_1:24908793-24908812 Msa1186510:intron 30.0%
! TATTAATAAAGTTGGCTCCA+AGG + chr8_1:24908844-24908863 None:intergenic 30.0%
GAGCTAAGTGATAAAAAAAG+AGG + chr8_1:24908995-24909014 None:intergenic 30.0%
TTTCTTAACTTATGCCTCAA+GGG + chr8_1:24909189-24909208 None:intergenic 30.0%
GAAATGTGCAAATCTTGAAA+TGG + chr8_1:24909523-24909542 None:intergenic 30.0%
!! AGAGTTCATTTTTCAATTGG+TGG - chr8_1:24909844-24909863 Msa1186510:intron 30.0%
!! ATTTTTCAATTGGTGGTACT+TGG - chr8_1:24909851-24909870 Msa1186510:intron 30.0%
!! TTTTTCAATTGGTGGTACTT+GGG - chr8_1:24909852-24909871 Msa1186510:intron 30.0%
GTTTATACCAGTATATCTTC+AGG - chr8_1:24909902-24909921 Msa1186510:intron 30.0%
TAGTTTACCTGAAGATATAC+TGG + chr8_1:24909912-24909931 None:intergenic 30.0%
!!! TACTTTTTCATCTAGCATAG+AGG - chr8_1:24910129-24910148 Msa1186510:intron 30.0%
! GTGACATATCTCAACTATTT+TGG - chr8_1:24910368-24910387 Msa1186510:intron 30.0%
!!! AGTCACTTTTTTTTTTGGAG+AGG - chr8_1:24910939-24910958 Msa1186510:intron 30.0%
CATAGTTATACAAGTTAACG+TGG + chr8_1:24910983-24911002 None:intergenic 30.0%
!! TTATAAAAGACTGGTTTGCA+AGG - chr8_1:24911086-24911105 Msa1186510:intron 30.0%
! TGAAGAATATGTTCCCATTT+TGG + chr8_1:24911275-24911294 None:intergenic 30.0%
CACCATCTAATTGGAAAATT+AGG - chr8_1:24911318-24911337 Msa1186510:CDS 30.0%
! CACCTAATTTTCCAATTAGA+TGG + chr8_1:24911323-24911342 None:intergenic 30.0%
GAATGGAATTAGTTCACTAA+AGG - chr8_1:24911342-24911361 Msa1186510:CDS 30.0%
CAAAAAATTCAGGACAATGT+TGG - chr8_1:24911609-24911628 Msa1186510:intron 30.0%
GGCAAAAATTGTTACTATGA+AGG + chr8_1:24911803-24911822 None:intergenic 30.0%
TGGAGCAAAGTATGATATTT+AGG + chr8_1:24911870-24911889 None:intergenic 30.0%
TGCTCCATACAAATCAATAT+AGG - chr8_1:24911883-24911902 Msa1186510:intron 30.0%
TCCATACAAATCAATATAGG+TGG - chr8_1:24911886-24911905 Msa1186510:intron 30.0%
CCATACAAATCAATATAGGT+GGG - chr8_1:24911887-24911906 Msa1186510:intron 30.0%
! TCTCTTTTTACACTAGATGA+TGG - chr8_1:24912015-24912034 Msa1186510:intron 30.0%
!!! TTTTTACACTAGATGATGGA+TGG - chr8_1:24912019-24912038 Msa1186510:intron 30.0%
!!! TTTTACACTAGATGATGGAT+GGG - chr8_1:24912020-24912039 Msa1186510:intron 30.0%
ATGGTTGAGCAAAATTTATG+TGG - chr8_1:24912143-24912162 Msa1186510:intron 30.0%
TTATGTGGTTGAGGATTATT+AGG - chr8_1:24912158-24912177 Msa1186510:intron 30.0%
ATGGTTGAGCAAAATTTATG+TGG - chr8_1:24912143-24912162 Msa1186510:intron 30.0%
TGGTTGAGCAAAATTTATGT+GGG - chr8_1:24912144-24912163 Msa1186510:intron 30.0%
!!! GTTACCGACTTTTTATCAAT+GGG + chr8_1:24912285-24912304 None:intergenic 30.0%
!!! TGTTACCGACTTTTTATCAA+TGG + chr8_1:24912286-24912305 None:intergenic 30.0%
CTTTGTTACCCATCAATAAA+AGG + chr8_1:24912407-24912426 None:intergenic 30.0%
GACAAGTGACAAACTTTAAT+AGG - chr8_1:24912607-24912626 Msa1186510:intron 30.0%
!! TAATTTGTTTATGGGCATGT+AGG - chr8_1:24912631-24912650 Msa1186510:intron 30.0%
CTATCAAACAACAAACACAA+AGG + chr8_1:24912715-24912734 None:intergenic 30.0%
!!! TGGATTTCTTGTTTTGTTTG+AGG + chr8_1:24912858-24912877 None:intergenic 30.0%
CAAACAAAACAAGAAATCCA+TGG - chr8_1:24912858-24912877 Msa1186510:intron 30.0%
TTAAACAAGTTAGCCATACA+GGG + chr8_1:24912937-24912956 None:intergenic 30.0%
ATTAAACAAGTTAGCCATAC+AGG + chr8_1:24912938-24912957 None:intergenic 30.0%
!! GGAATTGAAATTTTGATCCT+AGG + chr8_1:24913027-24913046 None:intergenic 30.0%
TATACTCACAATGGTTGTTT+CGG - chr8_1:24913198-24913217 Msa1186510:CDS 30.0%
GTTAATGTTGCTAAAAGTCA+CGG - chr8_1:24913241-24913260 Msa1186510:CDS 30.0%
CAATACTACCGATGTATATT+TGG - chr8_1:24913284-24913303 Msa1186510:CDS 30.0%
AGTAACCACCAAATATACAT+CGG + chr8_1:24913295-24913314 None:intergenic 30.0%
! CACACCTTGATGATTATTAT+TGG - chr8_1:24913536-24913555 Msa1186510:CDS 30.0%
! TGTGTTAAGTGCTGTTAATT+TGG - chr8_1:24913567-24913586 Msa1186510:CDS 30.0%
! GTGTTAAGTGCTGTTAATTT+GGG - chr8_1:24913568-24913587 Msa1186510:CDS 30.0%
!! AGGAGCATTACTAGAAATTG+GGG + chr8_1:24907250-24907269 None:intergenic 35.0%
!! GGAGTACTATGTTTGGATTT+TGG + chr8_1:24907290-24907309 None:intergenic 35.0%
! GGATGTTTGGGTCTTATATA+GGG + chr8_1:24907322-24907341 None:intergenic 35.0%
! AGGATGTTTGGGTCTTATAT+AGG + chr8_1:24907323-24907342 None:intergenic 35.0%
!! TGATTTTGGAGAGGATGTTT+GGG + chr8_1:24907334-24907353 None:intergenic 35.0%
!! ATGATTTTGGAGAGGATGTT+TGG + chr8_1:24907335-24907354 None:intergenic 35.0%
!!! TTTGGTGGTGAGTTTTGTTT+AGG + chr8_1:24907411-24907430 None:intergenic 35.0%
!!! AGTTACTTTTGCTCTTGCTT+GGG + chr8_1:24907447-24907466 None:intergenic 35.0%
!! AAAAATGGGTGTTGGAGATT+TGG + chr8_1:24907631-24907650 None:intergenic 35.0%
AGTGAAAAACGTGAACACAT+GGG - chr8_1:24907790-24907809 Msa1186510:CDS 35.0%
AATGAGTGAAGACAAGAGTA+TGG + chr8_1:24907885-24907904 None:intergenic 35.0%
GTCTTCACTCATTTATCTTG+TGG - chr8_1:24907892-24907911 Msa1186510:CDS 35.0%
TAGTTCATGGTTCTTGATTC+TGG - chr8_1:24908279-24908298 Msa1186510:intron 35.0%
! ATGCAACACTTTGTCTTTTG+CGG - chr8_1:24908337-24908356 Msa1186510:intron 35.0%
TGTGTGATATGTTAGTGATG+TGG + chr8_1:24908501-24908520 None:intergenic 35.0%
ATACTCCGGATCATTCTTTA+AGG + chr8_1:24908748-24908767 None:intergenic 35.0%
! GTTGCTCACTTTAAAGATAC+AGG - chr8_1:24908792-24908811 Msa1186510:intron 35.0%
ATTATGTGCCTTTAATGCCT+TGG - chr8_1:24908824-24908843 Msa1186510:intron 35.0%
AATGTTAAATTGTGCCCTTG+AGG - chr8_1:24909172-24909191 Msa1186510:CDS 35.0%
GTTTCTTAACTTATGCCTCA+AGG + chr8_1:24909190-24909209 None:intergenic 35.0%
TTTCTTATCTTGTGCCCTAA+GGG - chr8_1:24909311-24909330 Msa1186510:CDS 35.0%
!! CATGTTAACTTGTACCCTTA+GGG + chr8_1:24909328-24909347 None:intergenic 35.0%
!! TCATGTTAACTTGTACCCTT+AGG + chr8_1:24909329-24909348 None:intergenic 35.0%
!! ATGGGCTTAGTTTGATAATG+AGG + chr8_1:24909567-24909586 None:intergenic 35.0%
TAAATTGCAAGTGCATGCAT+GGG + chr8_1:24909585-24909604 None:intergenic 35.0%
TTAAATTGCAAGTGCATGCA+TGG + chr8_1:24909586-24909605 None:intergenic 35.0%
! TTGCTTTAGCTTATGGTTGA+TGG - chr8_1:24909627-24909646 Msa1186510:intron 35.0%
TTTCTTGACACTTTCAGTGT+CGG - chr8_1:24909689-24909708 Msa1186510:intron 35.0%
AAGTTTGAACACAAGGCTTA+TGG + chr8_1:24909776-24909795 None:intergenic 35.0%
TTAGTGTATATGGTAGGGTT+TGG + chr8_1:24910189-24910208 None:intergenic 35.0%
! TGGCTTTTACTTTGTACCTT+TGG - chr8_1:24910388-24910407 Msa1186510:intron 35.0%
! GACTAGTTATAGTCTTGGTT+TGG + chr8_1:24910448-24910467 None:intergenic 35.0%
!! ACAAGGACTAGTTATAGTCT+TGG + chr8_1:24910453-24910472 None:intergenic 35.0%
AAACACTTGTGAGATTGCTT+AGG + chr8_1:24910785-24910804 None:intergenic 35.0%
AGAAACCAGTTTCACCAAAA+TGG - chr8_1:24911258-24911277 Msa1186510:CDS 35.0%
GAAACCAGTTTCACCAAAAT+GGG - chr8_1:24911259-24911278 Msa1186510:CDS 35.0%
CAATTTGCACACCATCTAAT+TGG - chr8_1:24911309-24911328 Msa1186510:CDS 35.0%
TTCACTAAAGGTAAGAGAAG+TGG - chr8_1:24911354-24911373 Msa1186510:intron 35.0%
TCTTCCTATTGGGAATCAAA+AGG - chr8_1:24911685-24911704 Msa1186510:intron 35.0%
!! TGTACCTTTTGATTCCCAAT+AGG + chr8_1:24911692-24911711 None:intergenic 35.0%
! CAATTTTTGCCATAGTGAAG+AGG - chr8_1:24911812-24911831 Msa1186510:intron 35.0%
!! CCCACCTATATTGATTTGTA+TGG + chr8_1:24911890-24911909 None:intergenic 35.0%
!!! ATGGGTGGGTTAATTTTGAT+AGG - chr8_1:24912038-24912057 Msa1186510:intron 35.0%
!!! TGGGTGGGTTAATTTTGATA+GGG - chr8_1:24912039-24912058 Msa1186510:intron 35.0%
GGAGTGAAAGACAAGTTATA+TGG - chr8_1:24912124-24912143 Msa1186510:intron 35.0%
GAGCAAAATTTATGTGGTTG+AGG - chr8_1:24912149-24912168 Msa1186510:intron 35.0%
TAACACTACTCATGCTTAGT+TGG - chr8_1:24912301-24912320 Msa1186510:intron 35.0%
! TGTTACCCACCTTTTATTGA+TGG - chr8_1:24912395-24912414 Msa1186510:intron 35.0%
! GTTACCCACCTTTTATTGAT+GGG - chr8_1:24912396-24912415 Msa1186510:intron 35.0%
GTTACCCATCAATAAAAGGT+GGG + chr8_1:24912403-24912422 None:intergenic 35.0%
TGTTACCCATCAATAAAAGG+TGG + chr8_1:24912404-24912423 None:intergenic 35.0%
TTCGATTATTGAATGAGCGT+TGG - chr8_1:24912482-24912501 Msa1186510:intron 35.0%
TGGATACCAACAACTTATTG+TGG - chr8_1:24912672-24912691 Msa1186510:intron 35.0%
GGATACCAACAACTTATTGT+GGG - chr8_1:24912673-24912692 Msa1186510:intron 35.0%
CTAAACCCACAATAAGTTGT+TGG + chr8_1:24912681-24912700 None:intergenic 35.0%
CACACATATTTCACCAAACA+AGG - chr8_1:24912983-24913002 Msa1186510:intron 35.0%
ACATATTTCACCAAACAAGG+TGG - chr8_1:24912986-24913005 Msa1186510:intron 35.0%
!! GAAATTTTGATCCTAGGGTA+TGG + chr8_1:24913021-24913040 None:intergenic 35.0%
CGTATATTGGAACAACGAAA+AGG + chr8_1:24913087-24913106 None:intergenic 35.0%
ATAACCGTGTTGCAAAGAAT+CGG - chr8_1:24913157-24913176 Msa1186510:CDS 35.0%
TACTACCGATGTATATTTGG+TGG - chr8_1:24913287-24913306 Msa1186510:CDS 35.0%
CTTCCTCAATATATGATCAC+CGG - chr8_1:24913313-24913332 Msa1186510:CDS 35.0%
! TTTTATGATCAAATGCCGGA+CGG - chr8_1:24913376-24913395 Msa1186510:intron 35.0%
TACTATACTTATATACGCCG+CGG + chr8_1:24913419-24913438 None:intergenic 35.0%
GTTGGGAGATAACATCAATA+GGG - chr8_1:24913513-24913532 Msa1186510:intron 35.0%
AGATGAAAGAAGTAACCAAG+AGG - chr8_1:24913639-24913658 Msa1186510:five_prime_UTR 35.0%
GATGAAAGAAGTAACCAAGA+GGG - chr8_1:24913640-24913659 Msa1186510:five_prime_UTR 35.0%
!! TTCTGGAGTGTAGTAAAACA+AGG - chr8_1:24913684-24913703 Msa1186510:five_prime_UTR 35.0%
AGTAGCATTATCTATGGCAA+AGG + chr8_1:24913721-24913740 None:intergenic 35.0%
!!! ATGTTTGGATTTTGGGGTGT+GGG + chr8_1:24907282-24907301 None:intergenic 40.0%
!!! TATGTTTGGATTTTGGGGTG+TGG + chr8_1:24907283-24907302 None:intergenic 40.0%
!! GGGAAATCATGATTTTGGAG+AGG + chr8_1:24907343-24907362 None:intergenic 40.0%
! GTTGGGGGAAATCATGATTT+TGG + chr8_1:24907348-24907367 None:intergenic 40.0%
CAAAACTCACCACCAAATCA+TGG - chr8_1:24907414-24907433 Msa1186510:CDS 40.0%
!!! GAGTTACTTTTGCTCTTGCT+TGG + chr8_1:24907448-24907467 None:intergenic 40.0%
CATCACTCCACAACCAAAAA+GGG - chr8_1:24907475-24907494 Msa1186510:CDS 40.0%
GAGATTTGCATACCAAGGTT+TGG - chr8_1:24907712-24907731 Msa1186510:CDS 40.0%
TGAGATTTGATGCCAAACCT+TGG + chr8_1:24907727-24907746 None:intergenic 40.0%
! TTTTTCACTGCTGTGGTTGT+TGG + chr8_1:24907779-24907798 None:intergenic 40.0%
CAGTGAAAAACGTGAACACA+TGG - chr8_1:24907789-24907808 Msa1186510:CDS 40.0%
AAAAACGTGAACACATGGGT+TGG - chr8_1:24907794-24907813 Msa1186510:CDS 40.0%
!! CAAAGTGTTGCATCACAAAG+AGG + chr8_1:24908330-24908349 None:intergenic 40.0%
GTGCGAATTAGACAATACTC+CGG + chr8_1:24908762-24908781 None:intergenic 40.0%
GTTTCTTATCTTGTGCCCTA+AGG - chr8_1:24909310-24909329 Msa1186510:CDS 40.0%
TAACGTTTCTCACGTCACAT+AGG - chr8_1:24909659-24909678 Msa1186510:intron 40.0%
AACGTTTCTCACGTCACATA+GGG - chr8_1:24909660-24909679 Msa1186510:intron 40.0%
GCACTTTATGTGCTTTCCAT+TGG - chr8_1:24909741-24909760 Msa1186510:intron 40.0%
TATGTGCTTTCCATTGGTGA+AGG - chr8_1:24909747-24909766 Msa1186510:intron 40.0%
CTTGTGTACAACTTGACCAA+AGG + chr8_1:24910407-24910426 None:intergenic 40.0%
!! AAAAGACTGGTTTGCAAGGT+TGG - chr8_1:24911090-24911109 Msa1186510:intron 40.0%
!! TGTTCCCATTTTGGTGAAAC+TGG + chr8_1:24911266-24911285 None:intergenic 40.0%
ACTAAAGGTAAGAGAAGTGG+TGG - chr8_1:24911357-24911376 Msa1186510:intron 40.0%
AAATTCAGGACAATGTTGGG+TGG - chr8_1:24911613-24911632 Msa1186510:intron 40.0%
AATTCAGGACAATGTTGGGT+GGG - chr8_1:24911614-24911633 Msa1186510:intron 40.0%
! GGGAATCAAAAGGTACAGAA+AGG - chr8_1:24911695-24911714 Msa1186510:intron 40.0%
! TTGTAAATGGACTCCCTGTA+GGG + chr8_1:24911725-24911744 None:intergenic 40.0%
CATCTTTCTCCTCTTCACTA+TGG + chr8_1:24911824-24911843 None:intergenic 40.0%
TTGTCACTCATCCAACAACA+TGG + chr8_1:24912592-24912611 None:intergenic 40.0%
TTGTTTATGGGCATGTAGGT+TGG - chr8_1:24912635-24912654 Msa1186510:intron 40.0%
TGTTTATGGGCATGTAGGTT+GGG - chr8_1:24912636-24912655 Msa1186510:intron 40.0%
GTCACTGAACATAATCTCCA+TGG + chr8_1:24912878-24912897 None:intergenic 40.0%
TTCTTCGTCTAATCCCTGTA+TGG - chr8_1:24912921-24912940 Msa1186510:intron 40.0%
GATTAATGTGCCACCTTGTT+TGG + chr8_1:24912999-24913018 None:intergenic 40.0%
! CCACTTGCTAGAAAATTCAC+CGG - chr8_1:24913121-24913140 Msa1186510:intron 40.0%
AACTCCGATTCTTTGCAACA+CGG + chr8_1:24913164-24913183 None:intergenic 40.0%
GGCTCTTGTAGAAACGAAAA+GGG - chr8_1:24913219-24913238 Msa1186510:CDS 40.0%
ATGCCGGTGATCATATATTG+AGG + chr8_1:24913319-24913338 None:intergenic 40.0%
TCTGATGCGTTTACTATCGT+TGG - chr8_1:24913340-24913359 Msa1186510:intron 40.0%
GCGGCGTATATAAGTATAGT+AGG - chr8_1:24913418-24913437 Msa1186510:intron 40.0%
AAAAGCTGGTGAGAAATGGT+TGG - chr8_1:24913495-24913514 Msa1186510:intron 40.0%
AAAGCTGGTGAGAAATGGTT+GGG - chr8_1:24913496-24913515 Msa1186510:intron 40.0%
GGTTGGGAGATAACATCAAT+AGG - chr8_1:24913512-24913531 Msa1186510:intron 40.0%
GGCTACAATAGATATCGTTC+TGG - chr8_1:24913667-24913686 Msa1186510:five_prime_UTR 40.0%
!!! TGTTTGGATTTTGGGGTGTG+GGG + chr8_1:24907281-24907300 None:intergenic 45.0%
TTGGGCTATCTGCCATGATT+TGG + chr8_1:24907429-24907448 None:intergenic 45.0%
!!! CCTTTTTGGTTGTGGAGTGA+TGG + chr8_1:24907477-24907496 None:intergenic 45.0%
CCATCACTCCACAACCAAAA+AGG - chr8_1:24907474-24907493 Msa1186510:CDS 45.0%
! AGCATTCCAACCACCCTTTT+TGG + chr8_1:24907491-24907510 None:intergenic 45.0%
!! AATGGGTGTTGGAGATTTGG+AGG + chr8_1:24907628-24907647 None:intergenic 45.0%
GCTGAGAGATTTGCATACCA+AGG - chr8_1:24907707-24907726 Msa1186510:CDS 45.0%
! GTTCACGTTTTTCACTGCTG+TGG + chr8_1:24907786-24907805 None:intergenic 45.0%
TCCTCACTATTCCCTTTGCT+TGG - chr8_1:24907821-24907840 Msa1186510:CDS 45.0%
ACCAAGCAAAGGGAATAGTG+AGG + chr8_1:24907825-24907844 None:intergenic 45.0%
TCACTATTCCCTTTGCTTGG+TGG - chr8_1:24907824-24907843 Msa1186510:CDS 45.0%
CTATGAAGCCACCAAGCAAA+GGG + chr8_1:24907835-24907854 None:intergenic 45.0%
! AGTTGGCTCCAAGGCATTAA+AGG + chr8_1:24908835-24908854 None:intergenic 45.0%
CTCTTAGCATCCTTCTCTTC+CGG + chr8_1:24909828-24909847 None:intergenic 45.0%
CACTTGTGAGATTGCTTAGG+AGG + chr8_1:24910782-24910801 None:intergenic 45.0%
ATTCAGGACAATGTTGGGTG+GGG - chr8_1:24911615-24911634 Msa1186510:intron 45.0%
! GCATTGGCACTCTTCCTATT+GGG - chr8_1:24911675-24911694 Msa1186510:intron 45.0%
TACAGAAAGGAAAGCCCTAC+AGG - chr8_1:24911708-24911727 Msa1186510:intron 45.0%
ACAGAAAGGAAAGCCCTACA+GGG - chr8_1:24911709-24911728 Msa1186510:intron 45.0%
! CTTGTAAATGGACTCCCTGT+AGG + chr8_1:24911726-24911745 None:intergenic 45.0%
AGGGAGTCCATTTACAAGAC+TGG - chr8_1:24911728-24911747 Msa1186510:intron 45.0%
! ACTTGGGCCAGTCTTGTAAA+TGG + chr8_1:24911738-24911757 None:intergenic 45.0%
GGTCGAACATGAACATGATG+AGG + chr8_1:24911849-24911868 None:intergenic 45.0%
!! TACACTAGATGATGGATGGG+TGG - chr8_1:24912023-24912042 Msa1186510:intron 45.0%
!! ACACTAGATGATGGATGGGT+GGG - chr8_1:24912024-24912043 Msa1186510:intron 45.0%
! CAACAACATGGCTTGGATGT+TGG + chr8_1:24912580-24912599 None:intergenic 45.0%
CAACATCCAAGCCATGTTGT+TGG - chr8_1:24912578-24912597 Msa1186510:intron 45.0%
ACTCATCCAACAACATGGCT+TGG + chr8_1:24912587-24912606 None:intergenic 45.0%
GGCACATTAATCCATACCCT+AGG - chr8_1:24913007-24913026 Msa1186510:intron 45.0%
! ACGAAGACTCGGTCGTATAT+TGG + chr8_1:24913100-24913119 None:intergenic 45.0%
!! CCGGTGAATTTTCTAGCAAG+TGG + chr8_1:24913124-24913143 None:intergenic 45.0%
AAATTCACCGGTCACCCAAA+TGG - chr8_1:24913133-24913152 Msa1186510:intron 45.0%
AATTCACCGGTCACCCAAAT+GGG - chr8_1:24913134-24913153 Msa1186510:intron 45.0%
GCAACACGGTTATCCCATTT+GGG + chr8_1:24913150-24913169 None:intergenic 45.0%
TGCAACACGGTTATCCCATT+TGG + chr8_1:24913151-24913170 None:intergenic 45.0%
GTGTTGCAAAGAATCGGAGT+TGG - chr8_1:24913163-24913182 Msa1186510:CDS 45.0%
CGGCTCTTGTAGAAACGAAA+AGG - chr8_1:24913218-24913237 Msa1186510:CDS 45.0%
AGTAAACGCATCAGAGATGC+CGG + chr8_1:24913335-24913354 None:intergenic 45.0%
GAGGCAATTAGTGCAAAAGC+TGG - chr8_1:24913481-24913500 Msa1186510:intron 45.0%
GTGCAAAAGCTGGTGAGAAA+TGG - chr8_1:24913491-24913510 Msa1186510:intron 45.0%
AGAAGTAACCAAGAGGGTTC+TGG - chr8_1:24913646-24913665 Msa1186510:five_prime_UTR 45.0%
TATTGTAGCCAGAACCCTCT+TGG + chr8_1:24913657-24913676 None:intergenic 45.0%
!! TATAAATTGAAATTTAATAT+TGG + chr8_1:24908255-24908274 None:intergenic 5.0%
!! TTAGTATAATAATATATTAA+GGG + chr8_1:24909352-24909371 None:intergenic 5.0%
!! TTTAGTATAATAATATATTA+AGG + chr8_1:24909353-24909372 None:intergenic 5.0%
!!! ATTTAAAATAAAATAAAATG+AGG + chr8_1:24910900-24910919 None:intergenic 5.0%
! GGCTATCTGCCATGATTTGG+TGG + chr8_1:24907426-24907445 None:intergenic 50.0%
!! GGTTGTGGAGTGATGGATGA+GGG + chr8_1:24907470-24907489 None:intergenic 50.0%
!! TGGTTGTGGAGTGATGGATG+AGG + chr8_1:24907471-24907490 None:intergenic 50.0%
CACTCCACAACCAAAAAGGG+TGG - chr8_1:24907478-24907497 Msa1186510:CDS 50.0%
!!! CCAACCACCCTTTTTGGTTG+TGG + chr8_1:24907485-24907504 None:intergenic 50.0%
CCACAACCAAAAAGGGTGGT+TGG - chr8_1:24907482-24907501 Msa1186510:CDS 50.0%
GCTATGAAGCCACCAAGCAA+AGG + chr8_1:24907836-24907855 None:intergenic 50.0%
TGGTTCTTGATTCTGGCAGC+TGG - chr8_1:24908286-24908305 Msa1186510:intron 50.0%
TTCCTACTTCCCACACGTAG+GGG + chr8_1:24908385-24908404 None:intergenic 50.0%
GTTCCTACTTCCCACACGTA+GGG + chr8_1:24908386-24908405 None:intergenic 50.0%
GTGCTTTCCATTGGTGAAGG+AGG - chr8_1:24909750-24909769 Msa1186510:intron 50.0%
CTTATGGCCTCCTTCACCAA+TGG + chr8_1:24909760-24909779 None:intergenic 50.0%
GCGGCGAAAGTTTGAACACA+AGG + chr8_1:24909783-24909802 None:intergenic 50.0%
! TTGGTGGTACTTGGGCATTG+TGG - chr8_1:24909860-24909879 Msa1186510:intron 50.0%
!! GACTGGTTTGCAAGGTTGGT+AGG - chr8_1:24911094-24911113 Msa1186510:intron 50.0%
!! AGGAGTATTGGCAGGAGTGT+TGG - chr8_1:24911647-24911666 Msa1186510:intron 50.0%
!! ATTGGCAGGAGTGTTGGCAT+TGG - chr8_1:24911653-24911672 Msa1186510:intron 50.0%
!! AGGAGTGTTGGCATTGGCAT+TGG - chr8_1:24911659-24911678 Msa1186510:intron 50.0%
!! GGCATTGGCACTCTTCCTAT+TGG - chr8_1:24911674-24911693 Msa1186510:intron 50.0%
AGCTGCGGCGACAAAAACTT+GGG + chr8_1:24911754-24911773 None:intergenic 50.0%
! TGGGCATGTAGGTTGGGTTT+CGG - chr8_1:24912642-24912661 Msa1186510:intron 50.0%
! CATGTAGGTTGGGTTTCGGT+TGG - chr8_1:24912646-24912665 Msa1186510:intron 50.0%
TTCCCTCCAGCATCACTTCA+AGG - chr8_1:24913043-24913062 Msa1186510:intron 50.0%
TAGCAAGTGGCACGAAGACT+CGG + chr8_1:24913111-24913130 None:intergenic 50.0%
GGTTATCCCATTTGGGTGAC+CGG + chr8_1:24913143-24913162 None:intergenic 50.0%
TGGGGTGTGGGGATGAGAAA+AGG + chr8_1:24907270-24907289 None:intergenic 55.0%
GGTTCCTACTTCCCACACGT+AGG + chr8_1:24908387-24908406 None:intergenic 55.0%
GTCGTCGTCGAACTGATTGG+CGG + chr8_1:24909802-24909821 None:intergenic 55.0%
CGTGTCGTCGTCGAACTGAT+TGG + chr8_1:24909805-24909824 None:intergenic 55.0%
! TGGTACTTGGGCATTGTGGC+TGG - chr8_1:24909864-24909883 Msa1186510:intron 55.0%
GACAATGTTGGGTGGGGTGT+GGG - chr8_1:24911621-24911640 Msa1186510:intron 55.0%
ACAATGTTGGGTGGGGTGTG+GGG - chr8_1:24911622-24911641 Msa1186510:intron 55.0%
! GGGTGTGGGGTTAGGAGTAT+TGG - chr8_1:24911635-24911654 Msa1186510:intron 55.0%
!! GTGGGGTTAGGAGTATTGGC+AGG - chr8_1:24911639-24911658 Msa1186510:intron 55.0%
GAGCTGCGGCGACAAAAACT+TGG + chr8_1:24911755-24911774 None:intergenic 55.0%
GGTTGGGTTTCGGTTGGAGT+TGG - chr8_1:24912652-24912671 Msa1186510:intron 55.0%
GGCCTTGAAGTGATGCTGGA+GGG + chr8_1:24913048-24913067 None:intergenic 55.0%
AGGCCTTGAAGTGATGCTGG+AGG + chr8_1:24913049-24913068 None:intergenic 55.0%
ACGAGGCCTTGAAGTGATGC+TGG + chr8_1:24913052-24913071 None:intergenic 55.0%
GCATCACTTCAAGGCCTCGT+CGG - chr8_1:24913052-24913071 Msa1186510:intron 55.0%
AAAGGATCGTGACTCCGACG+AGG + chr8_1:24913069-24913088 None:intergenic 55.0%
CCCAAACTTCTCAGTCCGTC+CGG + chr8_1:24913394-24913413 None:intergenic 55.0%
!! CCGGACGGACTGAGAAGTTT+GGG - chr8_1:24913391-24913410 Msa1186510:intron 55.0%
ACTGAGAAGTTTGGGAGCCG+CGG - chr8_1:24913399-24913418 Msa1186510:intron 55.0%
ATGAATGGGGCCCCTACGTG+TGG - chr8_1:24908372-24908391 Msa1186510:intron 60.0%
TGAATGGGGCCCCTACGTGT+GGG - chr8_1:24908373-24908392 Msa1186510:intron 60.0%
TCAGTTCGACGACGACACGC+CGG - chr8_1:24909806-24909825 Msa1186510:intron 60.0%
GGACAATGTTGGGTGGGGTG+TGG - chr8_1:24911620-24911639 Msa1186510:intron 60.0%
!! GCCGGACGGACTGAGAAGTT+TGG - chr8_1:24913390-24913409 Msa1186510:intron 60.0%
GGCCCCTACGTGTGGGAAGT+AGG - chr8_1:24908380-24908399 Msa1186510:intron 65.0%
CGACGACACGCCGGAAGAGA+AGG - chr8_1:24909815-24909834 Msa1186510:intron 65.0%
GTTGGGTGGGGTGTGGGGTT+AGG - chr8_1:24911627-24911646 Msa1186510:intron 65.0%
TTGTCGCCGCAGCTCGCAAG+TGG - chr8_1:24911760-24911779 Msa1186510:intron 65.0%
CACGCGCCACTTGCGAGCTG+CGG + chr8_1:24911769-24911788 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 24907174 24913875 24907174 ID=Msa1186510;Name=Msa1186510
chr8_1 mRNA 24907174 24913875 24907174 ID=Msa1186510-mRNA-1;Parent=Msa1186510;Name=Msa1186510-mRNA-1;_AED=0.05;_eAED=0.05;_QI=259|1|1|1|1|1|5|179|572
chr8_1 exon 24907174 24908232 24907174 ID=Msa1186510-mRNA-1:exon:9039;Parent=Msa1186510-mRNA-1
chr8_1 exon 24909145 24909428 24909145 ID=Msa1186510-mRNA-1:exon:9038;Parent=Msa1186510-mRNA-1
chr8_1 exon 24911126 24911368 24911126 ID=Msa1186510-mRNA-1:exon:9037;Parent=Msa1186510-mRNA-1
chr8_1 exon 24913136 24913353 24913136 ID=Msa1186510-mRNA-1:exon:9036;Parent=Msa1186510-mRNA-1
chr8_1 exon 24913523 24913875 24913523 ID=Msa1186510-mRNA-1:exon:9035;Parent=Msa1186510-mRNA-1
chr8_1 five_prime_UTR 24913617 24913875 24913617 ID=Msa1186510-mRNA-1:five_prime_utr;Parent=Msa1186510-mRNA-1
chr8_1 CDS 24913523 24913616 24913523 ID=Msa1186510-mRNA-1:cds;Parent=Msa1186510-mRNA-1
chr8_1 CDS 24913136 24913353 24913136 ID=Msa1186510-mRNA-1:cds;Parent=Msa1186510-mRNA-1
chr8_1 CDS 24911126 24911368 24911126 ID=Msa1186510-mRNA-1:cds;Parent=Msa1186510-mRNA-1
chr8_1 CDS 24909145 24909428 24909145 ID=Msa1186510-mRNA-1:cds;Parent=Msa1186510-mRNA-1
chr8_1 CDS 24907353 24908232 24907353 ID=Msa1186510-mRNA-1:cds;Parent=Msa1186510-mRNA-1
chr8_1 three_prime_UTR 24907174 24907352 24907174 ID=Msa1186510-mRNA-1:three_prime_utr;Parent=Msa1186510-mRNA-1
Gene Sequence

>Msa1186510

ATGGCAGATAGCCCAAGCAAGAGCAAAAGTAACTCCCTCATCCATCACTCCACAACCAAAAAGGGTGGTTGGAATGCTGCCATCTTCATCATATTTGTGGAATTTGCTGAGAGATTTGCATACCAAGGTTTGGCATCAAATCTCATAAACTACCTCACAAAATTTCTGAATGAACCAACAACCACAGCAGTGAAAAACGTGAACACATGGGTTGGTGTCTCCTCACTATTCCCTTTGCTTGGTGGCTTCATAGCTGATTCATATCTTGGTCGATTCAACACCATACTCTTGTCTTCACTCATTTATCTTGTGGGCATGATTTTCTTGACACTTTCAGTGTCGGCACTTAGACACAAGACACTTTTCTTCTTTGCACTTTATGTGCTTTCCATTGGTGAAGGAGGCCATAAGCCTTGTGTTCAAACTTTCGCCGCCAATCAGTTCGACGACGACACGCCGGAAGAGAAGGATGCTAAGAGTTCATTTTTCAATTGGTGGTACTTGGGCATTGTGGCTGGTTCAACTGCTGCTGTGTTTATACCAGTATATCTTCAGGACAATGTTGGGTGGGGTGTGGGGTTAGGAGTATTGGCAGGAGTGTTGGCATTGGCATTGGCACTCTTCCTATTGGGAATCAAAAGGTACAGAAAGGAAAGCCCTACAGGGAGTCCATTTACAAGACTGGCCCAAGTTTTTGTCGCCGCAGCTCGCAAGTGGCGCGTGCAAGACACTCTCCTTCATAGTAACAATTTTTGCCATAGTGAAGAGGAGAAAGATGAGCCTCATCATGTTCATGTTCGACCTAAATATCATACTTTGCTCCATACAAATCAATATAGATTTTTGGACAAAGCAGCAATAATTGATGAAGTTGATTCCTCAAACAAAACAAGAAATCCATGGAGATTATGTTCAGTGACTCAAGTTGAAGAAGTGAAACTAGTTCTTCGTCTAATCCCTGTATGGCTAACTTGTTTAATGTTCACTGTTGTTCAAGCTCAAGTACACACATATTTCACCAAACAAGGTGGCACATTAATCCATACCCTAGGATCAAAATTTCAATTCCCTCCAGCATCACTTCAAGGCCTCGTCGGAGTCACGATCCTTTTCGTTGTTCCAATATACGACCGAGTCTTCGTGCCACTTGCTAGAAAATTCACCGGTCACCCAAATGGGATAACCGTGTTGCAAAGAATCGGAGTTGGTTTATTTTTATCTATACTCACAATGGTTGTTTCGGCTCTTGTAGAAACGAAAAGGGTTAATGTTGCTAAAAGTCACGGTCTAATAGACGATCAAAGTGCAATACTACCGATGTATATTTGGTGGTTACTTCCTCAATATATGATCACCGGCATCTCTGATGCGTTTACTATCGTTGGATTACAAGAAATTTTTTATGATCAAATGCCGGACGGACTGAGAAGTTTGGGAGCCGCGGCGTATATAAGTATAGTAGGAGTTGGAAGCTTTGTTAGTAACATTATAATTGAAGTTGTTGAGGCAATTAGTGCAAAAGCTGGTGAGAAATGGTTGGGAGATAACATCAATAGGGCACACCTTGATGATTATTATTGGGTTATGGCTGTGTTAAGTGCTGTTAATTTGGGTGTTTATATGTGGATTGCAAAGTGTTTTGAGTATAAAAAGGTAGATGGAGATGAAAGAAGTAACCAAGAGGGTTCTGGCTACAATAGATATCGTTCTGGAGTGTAG
Protein sequence

>Msa1186510

MADSPSKSKSNSLIHHSTTKKGGWNAAIFIIFVEFAERFAYQGLASNLINYLTKFLNEPTTTAVKNVNTWVGVSSLFPLLGGFIADSYLGRFNTILLSSLIYLVGMIFLTLSVSALRHKTLFFFALYVLSIGEGGHKPCVQTFAANQFDDDTPEEKDAKSSFFNWWYLGIVAGSTAAVFIPVYLQDNVGWGVGLGVLAGVLALALALFLLGIKRYRKESPTGSPFTRLAQVFVAAARKWRVQDTLLHSNNFCHSEEEKDEPHHVHVRPKYHTLLHTNQYRFLDKAAIIDEVDSSNKTRNPWRLCSVTQVEEVKLVLRLIPVWLTCLMFTVVQAQVHTYFTKQGGTLIHTLGSKFQFPPASLQGLVGVTILFVVPIYDRVFVPLARKFTGHPNGITVLQRIGVGLFLSILTMVVSALVETKRVNVAKSHGLIDDQSAILPMYIWWLLPQYMITGISDAFTIVGLQEIFYDQMPDGLRSLGAAAYISIVGVGSFVSNIIIEVVEAISAKAGEKWLGDNINRAHLDDYYWVMAVLSAVNLGVYMWIAKCFEYKKVDGDERSNQEGSGYNRYRSGV*