AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1321330

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1321330 MtrunA17_Chr8g0353031 96.154 572 22 0 1 572 1 572 0.0 1095
Msa1321330 MtrunA17_Chr3g0082631 65.880 466 155 2 100 563 9 472 0.0 610
Msa1321330 MtrunA17_Chr4g0014871 48.435 543 249 7 19 550 31 553 3.79e-176 509
Msa1321330 MtrunA17_Chr4g0014841 48.435 543 246 8 19 550 30 549 1.79e-175 508
Msa1321330 MtrunA17_Chr3g0077151 47.689 541 250 7 19 551 29 544 6.61e-175 506
Msa1321330 MtrunA17_Chr4g0014781 48.066 543 250 8 19 550 30 551 2.44e-173 502
Msa1321330 MtrunA17_Chr4g0014791 48.066 543 248 6 19 550 30 549 1.22e-171 498
Msa1321330 MtrunA17_Chr4g0014801 48.339 542 248 7 20 550 31 551 1.80e-170 495
Msa1321330 MtrunA17_Chr3g0112611 43.750 560 287 7 22 566 36 582 2.29e-165 483
Msa1321330 MtrunA17_Chr7g0240381 40.411 584 310 6 3 570 17 578 3.37e-163 477
Msa1321330 MtrunA17_Chr3g0112671 42.419 554 282 7 20 556 35 568 2.53e-161 472
Msa1321330 MtrunA17_Chr4g0008651 40.949 569 294 7 22 564 38 590 2.85e-160 470
Msa1321330 MtrunA17_Chr7g0241741 42.572 552 292 6 20 555 24 566 1.79e-158 464
Msa1321330 MtrunA17_Chr3g0104011 44.107 560 278 9 20 557 24 570 3.17e-155 456
Msa1321330 MtrunA17_Chr8g0375311 42.077 549 290 9 22 551 44 583 4.10e-147 436
Msa1321330 MtrunA17_Chr4g0005901 41.410 553 291 6 20 552 34 573 2.17e-146 434
Msa1321330 MtrunA17_Chr3g0114501 42.468 551 288 8 19 551 23 562 3.33e-145 431
Msa1321330 MtrunA17_Chr4g0014861 48.730 433 199 8 121 550 16 428 5.24e-145 425
Msa1321330 MtrunA17_Chr7g0261791 39.726 584 298 9 19 567 30 594 5.84e-142 424
Msa1321330 MtrunA17_Chr8g0375291 41.805 543 280 9 22 541 44 573 1.17e-141 422
Msa1321330 MtrunA17_Chr7g0261811 40.395 557 288 7 19 549 28 566 1.18e-141 423
Msa1321330 MtrunA17_Chr7g0261881 39.711 554 298 6 19 550 28 567 1.83e-140 419
Msa1321330 MtrunA17_Chr8g0375351 39.273 550 306 7 22 552 44 584 2.63e-139 416
Msa1321330 MtrunA17_Chr1g0187241 40.642 561 293 7 19 555 27 571 2.84e-137 411
Msa1321330 MtrunA17_Chr8g0375361 40.614 554 295 7 20 551 41 582 3.77e-137 410
Msa1321330 MtrunA17_Chr8g0375341 38.727 550 309 7 22 552 44 584 5.70e-137 410
Msa1321330 MtrunA17_Chr7g0261771 39.024 574 303 8 19 566 32 584 1.43e-136 410
Msa1321330 MtrunA17_Chr8g0375321 39.599 548 303 7 22 550 41 579 1.92e-136 409
Msa1321330 MtrunA17_Chr8g0375331 40.545 550 297 9 22 551 28 567 9.66e-135 404
Msa1321330 MtrunA17_Chr7g0261851 39.828 580 305 8 19 572 29 590 5.41e-132 398
Msa1321330 MtrunA17_Chr1g0166791 38.172 558 311 6 19 555 25 569 4.90e-130 392
Msa1321330 MtrunA17_Chr3g0142091 39.455 550 294 9 22 551 30 560 5.99e-129 389
Msa1321330 MtrunA17_Chr5g0399061 38.163 566 315 7 19 562 28 580 4.11e-128 387
Msa1321330 MtrunA17_Chr3g0142101 37.963 540 300 6 22 544 39 560 1.09e-127 386
Msa1321330 MtrunA17_Chr5g0422881 36.602 571 326 7 20 566 22 580 4.83e-127 385
Msa1321330 MtrunA17_Chr1g0166711 39.068 558 305 6 19 555 26 569 1.81e-124 378
Msa1321330 MtrunA17_Chr1g0166741 38.278 546 289 8 9 531 21 541 3.09e-124 377
Msa1321330 MtrunA17_Chr7g0255621 36.833 562 326 7 20 560 22 575 1.02e-123 377
Msa1321330 MtrunA17_Chr7g0255611 37.037 567 320 9 20 561 31 585 4.65e-123 375
Msa1321330 MtrunA17_Chr7g0255601 36.192 583 339 8 1 561 13 584 2.37e-120 368
Msa1321330 MtrunA17_Chr4g0056431 38.732 568 312 9 19 562 26 581 1.99e-119 365
Msa1321330 MtrunA17_Chr5g0399071 36.861 567 325 8 16 562 25 578 4.30e-119 364
Msa1321330 MtrunA17_Chr1g0166771 38.224 518 279 7 37 533 10 507 9.43e-119 362
Msa1321330 MtrunA17_Chr7g0217461 36.364 572 319 8 20 560 26 583 2.60e-116 357
Msa1321330 MtrunA17_Chr6g0451841 36.445 557 300 14 25 555 12 540 2.75e-115 353
Msa1321330 MtrunA17_Chr7g0261661 40.275 437 238 6 118 549 34 452 4.49e-113 346
Msa1321330 MtrunA17_Chr4g0054891 34.452 566 332 8 22 563 114 664 5.88e-111 346
Msa1321330 MtrunA17_Chr7g0214461 33.865 564 335 9 20 563 80 625 1.24e-110 343
Msa1321330 MtrunA17_Chr7g0214731 34.991 583 329 10 19 564 62 631 2.05e-110 343
Msa1321330 MtrunA17_Chr5g0400371 32.982 570 348 9 20 565 114 673 1.47e-108 340
Msa1321330 MtrunA17_Chr1g0213711 32.384 562 338 8 19 557 22 564 3.61e-108 336
Msa1321330 MtrunA17_Chr5g0415791 35.385 585 341 9 1 557 10 585 5.00e-107 333
Msa1321330 MtrunA17_Chr4g0059991 32.712 590 358 9 1 564 8 584 1.56e-105 330
Msa1321330 MtrunA17_Chr4g0059981 32.699 578 343 8 23 564 36 603 1.98e-105 329
Msa1321330 MtrunA17_Chr7g0218851 34.403 561 328 9 20 558 48 590 1.02e-103 325
Msa1321330 MtrunA17_Chr7g0240271 32.986 576 344 11 15 561 19 581 2.43e-103 323
Msa1321330 MtrunA17_Chr4g0059971 32.432 555 341 8 23 551 39 585 1.96e-101 319
Msa1321330 MtrunA17_Chr7g0261751 38.229 463 242 8 19 437 32 494 6.91e-101 315
Msa1321330 MtrunA17_Chr2g0284701 32.292 576 348 9 20 560 34 602 3.18e-100 316
Msa1321330 MtrunA17_Chr3g0133341 34.336 565 319 10 20 556 16 556 1.37e-99 313
Msa1321330 MtrunA17_Chr1g0166731 39.220 436 250 5 121 555 45 466 5.96e-98 306
Msa1321330 MtrunA17_Chr8g0379971 32.986 576 335 9 20 550 22 591 4.20e-97 308
Msa1321330 MtrunA17_Chr5g0439381 34.507 568 314 10 19 559 29 565 1.38e-96 306
Msa1321330 MtrunA17_Chr8g0362781 32.343 572 345 9 9 551 24 582 1.76e-96 305
Msa1321330 MtrunA17_Chr4g0069581 35.887 496 277 12 76 551 44 518 6.27e-96 303
Msa1321330 MtrunA17_Chr8g0362711 32.504 563 331 8 20 550 26 571 9.35e-96 303
Msa1321330 MtrunA17_Chr5g0415961 31.972 563 335 9 20 550 26 572 2.09e-95 303
Msa1321330 MtrunA17_Chr2g0276751 32.971 552 317 9 22 550 42 563 1.08e-94 301
Msa1321330 MtrunA17_Chr7g0240281 30.399 602 376 9 2 572 5 594 4.23e-94 300
Msa1321330 MtrunA17_Chr8g0390331 32.095 592 349 12 9 567 6 577 4.55e-94 299
Msa1321330 MtrunA17_Chr1g0147631 31.746 567 343 8 20 560 27 575 6.73e-93 296
Msa1321330 MtrunA17_Chr4g0011471 32.707 532 317 9 40 545 38 554 8.37e-93 296
Msa1321330 MtrunA17_Chr1g0193391 29.281 584 371 10 1 565 1 561 4.26e-92 295
Msa1321330 MtrunA17_Chr4g0063591 34.155 568 333 11 19 563 23 572 5.27e-92 293
Msa1321330 MtrunA17_Chr7g0271221 31.076 576 353 10 1 556 1 552 1.89e-90 290
Msa1321330 MtrunA17_Chr8g0379991 32.865 569 312 11 43 550 5 564 2.36e-90 289
Msa1321330 MtrunA17_Chr4g0060001 33.151 549 322 10 17 537 28 559 4.14e-90 290
Msa1321330 MtrunA17_Chr2g0331521 31.497 581 349 12 11 561 14 575 1.30e-88 285
Msa1321330 MtrunA17_Chr3g0112631 45.161 279 150 2 280 556 3 280 2.50e-87 272
Msa1321330 MtrunA17_Chr4g0011041 29.391 558 351 12 22 552 40 581 7.52e-84 272
Msa1321330 MtrunA17_Chr4g0003761 30.619 565 344 9 6 541 18 563 5.11e-83 271
Msa1321330 MtrunA17_Chr7g0235521 33.410 437 269 8 120 547 33 456 1.31e-82 266
Msa1321330 MtrunA17_Chr2g0331511 31.934 548 335 8 15 537 18 552 1.89e-82 270
Msa1321330 MtrunA17_Chr7g0240211 33.181 437 270 8 120 547 33 456 1.35e-81 263
Msa1321330 MtrunA17_Chr7g0240181 33.181 437 270 8 120 547 33 456 1.35e-81 263
Msa1321330 MtrunA17_Chr7g0240131 33.181 437 270 8 120 547 33 456 1.52e-81 263
Msa1321330 MtrunA17_Chr2g0326211 31.065 573 343 12 3 552 6 549 3.56e-81 265
Msa1321330 MtrunA17_Chr2g0331481 32.299 548 329 9 21 541 28 560 4.58e-81 266
Msa1321330 MtrunA17_Chr2g0331471 32.550 553 323 11 20 541 90 623 2.21e-80 266
Msa1321330 MtrunA17_Chr5g0415841 34.339 431 257 6 129 550 46 459 6.18e-80 259
Msa1321330 MtrunA17_Chr1g0177591 31.579 551 332 12 10 541 34 558 1.02e-78 259
Msa1321330 MtrunA17_Chr8g0362801 33.925 451 275 7 120 561 37 473 1.94e-78 255
Msa1321330 MtrunA17_Chr7g0240151 32.339 436 257 8 120 547 33 438 1.84e-75 247
Msa1321330 MtrunA17_Chr2g0331461 30.345 580 343 9 21 561 28 585 2.46e-75 251
Msa1321330 MtrunA17_Chr1g0157601 27.193 570 368 9 6 547 3 553 4.05e-75 249
Msa1321330 MtrunA17_Chr7g0261731 40.000 335 157 6 19 327 32 348 5.98e-75 242
Msa1321330 MtrunA17_Chr1g0157621 28.913 543 344 12 43 561 5 529 8.17e-72 240
Msa1321330 MtrunA17_Chr2g0325951 29.463 577 347 14 3 552 6 549 3.05e-70 236
Msa1321330 MtrunA17_Chr2g0325961 29.319 573 354 10 3 552 6 550 3.28e-70 236
Msa1321330 MtrunA17_Chr1g0157611 28.142 565 363 12 21 560 19 565 3.38e-70 236
Msa1321330 MtrunA17_Chr1g0177611 32.301 452 273 11 99 541 2 429 1.16e-68 228
Msa1321330 MtrunA17_Chr1g0177631 32.373 451 274 9 99 541 2 429 1.65e-67 225
Msa1321330 MtrunA17_Chr3g0142121 39.015 264 149 2 281 544 11 262 4.14e-65 214
Msa1321330 MtrunA17_Chr4g0060071 38.267 277 159 6 276 550 32 298 7.15e-58 196
Msa1321330 MtrunA17_Chr3g0142111 38.163 283 152 4 22 287 50 326 5.94e-55 189
Msa1321330 MtrunA17_Chr7g0261721 39.906 213 126 2 350 561 1 212 5.65e-50 172
Msa1321330 MtrunA17_Chr7g0234151 27.438 441 254 12 119 545 28 416 7.95e-47 169
Msa1321330 MtrunA17_Chr7g0234381 25.874 429 276 7 119 545 28 416 1.32e-46 169
Msa1321330 MtrunA17_Chr7g0234181 26.545 437 263 10 119 545 23 411 5.72e-46 167
Msa1321330 MtrunA17_Chr3g0112651 45.161 124 68 0 118 241 49 172 1.16e-32 124
Msa1321330 MtrunA17_Chr1g0147591 32.524 206 114 5 128 324 9 198 4.76e-29 114
Msa1321330 MtrunA17_Chr3g0112661 46.667 105 56 0 20 124 33 137 2.47e-26 104
Msa1321330 MtrunA17_Chr3g0082621 68.056 72 23 0 33 104 1 72 5.71e-26 101
Msa1321330 MtrunA17_Chr7g0261831 36.527 167 82 4 228 388 1 149 1.14e-25 105
Msa1321330 MtrunA17_Chr4g0014851 58.889 90 36 1 19 107 31 120 6.12e-25 101
Msa1321330 MtrunA17_Chr2g0326221 29.302 215 115 5 342 552 44 225 8.24e-22 94.4
Msa1321330 MtrunA17_Chr4g0060061 38.739 111 68 0 121 231 18 128 7.04e-21 89.0
Msa1321330 MtrunA17_Chr1g0166721 44.000 100 53 2 19 118 26 122 1.46e-18 82.8
Msa1321330 MtrunA17_Chr7g0261671 43.023 86 49 0 19 104 33 118 1.12e-16 76.3
Msa1321330 MtrunA17_Chr1g0147581 31.667 120 77 1 404 523 1 115 3.90e-13 66.2
Msa1321330 MtrunA17_Chr7g0240141 34.783 92 58 1 15 104 22 113 2.15e-11 61.2
Msa1321330 MtrunA17_Chr8g0362791 37.209 86 54 0 23 108 41 126 5.47e-11 60.8
Msa1321330 MtrunA17_Chr7g0240221 33.696 92 59 1 15 104 22 113 8.13e-11 59.7
Msa1321330 MtrunA17_Chr7g0240191 33.696 92 59 1 15 104 22 113 8.13e-11 59.7
Msa1321330 MtrunA17_Chr7g0240161 33.696 92 59 1 15 104 22 113 8.13e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1321330 AT3G54450.1 55.735 558 238 6 8 561 2 554 0.0 653
Msa1321330 AT1G72125.1 44.846 553 260 6 22 553 31 559 2.91e-162 474
Msa1321330 AT1G22540.1 45.570 553 257 9 19 553 29 555 1.88e-160 469
Msa1321330 AT3G53960.1 42.234 573 288 10 3 552 23 575 7.68e-160 470
Msa1321330 AT1G72120.1 44.765 554 261 9 19 553 28 555 2.71e-159 467
Msa1321330 AT2G37900.1 41.935 558 280 9 20 556 38 572 4.49e-156 459
Msa1321330 AT3G54140.1 42.495 553 291 6 20 554 24 567 3.70e-152 449
Msa1321330 AT3G54140.2 42.495 553 291 6 20 554 24 567 3.70e-152 449
Msa1321330 AT5G01180.2 41.727 556 290 8 20 554 25 567 2.77e-151 447
Msa1321330 AT5G01180.3 41.727 556 290 8 20 554 25 567 2.77e-151 447
Msa1321330 AT5G01180.1 41.727 556 290 8 20 554 25 567 2.77e-151 447
Msa1321330 AT1G22550.1 41.869 578 285 7 1 553 11 562 2.35e-150 444
Msa1321330 AT1G72140.1 42.576 559 257 8 19 551 33 553 2.17e-147 436
Msa1321330 AT1G72130.1 42.308 546 267 8 21 553 26 536 1.99e-144 428
Msa1321330 AT1G22570.1 41.003 578 291 6 1 553 11 563 4.48e-144 428
Msa1321330 AT2G02040.1 41.441 555 289 9 20 551 41 582 4.53e-142 424
Msa1321330 AT1G22570.2 41.575 546 269 6 33 553 6 526 1.92e-139 415
Msa1321330 AT2G37900.2 41.165 515 259 9 63 556 2 493 4.72e-139 413
Msa1321330 AT1G62200.1 39.856 557 294 8 17 551 49 586 7.49e-138 413
Msa1321330 AT2G40460.1 42.086 556 281 10 19 553 23 558 1.73e-135 407
Msa1321330 AT5G46040.1 39.254 563 308 5 19 561 26 574 1.69e-133 402
Msa1321330 AT5G46050.1 40.075 534 279 5 21 530 28 544 2.59e-133 401
Msa1321330 AT1G62200.2 38.554 581 297 9 17 551 49 615 1.25e-132 400
Msa1321330 AT1G62200.3 38.554 581 297 9 17 551 63 629 1.97e-132 400
Msa1321330 AT2G02020.1 38.069 549 275 7 22 552 44 545 1.46e-126 382
Msa1321330 AT1G68570.1 39.640 555 306 7 21 553 24 571 1.65e-125 381
Msa1321330 AT1G68570.2 39.668 542 298 7 34 553 7 541 5.12e-124 377
Msa1321330 AT5G14940.1 35.943 562 314 12 20 556 7 547 2.01e-116 357
Msa1321330 AT3G01350.1 36.092 568 319 10 21 559 8 560 2.91e-115 354
Msa1321330 AT5G13400.1 35.106 564 331 8 19 556 63 617 8.30e-113 349
Msa1321330 AT1G72130.2 40.411 438 222 7 118 551 14 416 4.28e-112 341
Msa1321330 AT1G72130.3 40.411 438 222 7 118 551 14 416 4.28e-112 341
Msa1321330 AT1G32450.1 33.972 574 345 10 19 566 36 601 6.22e-112 347
Msa1321330 AT1G69870.1 35.018 554 327 6 20 550 51 594 2.29e-109 340
Msa1321330 AT1G12110.1 36.462 554 322 8 19 551 26 570 3.31e-109 339
Msa1321330 AT5G46050.2 40.674 445 243 4 121 561 36 463 4.47e-108 332
Msa1321330 AT2G26690.1 35.501 569 322 11 19 562 23 571 6.53e-104 325
Msa1321330 AT1G59740.1 34.353 556 313 9 19 545 40 572 9.68e-104 325
Msa1321330 AT1G18880.1 33.568 569 339 6 23 563 22 579 3.16e-103 323
Msa1321330 AT4G21680.1 33.571 560 333 9 22 554 30 577 1.44e-102 322
Msa1321330 AT5G19640.1 32.862 566 329 11 21 564 60 596 1.25e-100 317
Msa1321330 AT2G26690.2 35.315 555 314 11 33 562 4 538 5.93e-100 313
Msa1321330 AT1G69850.1 34.452 566 325 10 20 550 25 579 3.30e-98 310
Msa1321330 AT1G52190.1 32.639 576 337 10 1 541 1 560 1.55e-97 309
Msa1321330 AT2G26690.3 35.413 545 307 11 43 562 2 526 2.86e-97 306
Msa1321330 AT1G27040.1 35.572 551 317 9 20 549 27 560 4.61e-97 307
Msa1321330 AT1G27040.2 35.572 551 317 9 20 549 23 556 5.70e-97 306
Msa1321330 AT1G33440.1 35.262 553 302 13 19 542 37 562 6.54e-96 305
Msa1321330 AT3G16180.1 32.558 602 349 10 1 561 1 586 1.42e-94 301
Msa1321330 AT1G27040.3 35.502 538 309 9 33 549 8 528 3.80e-94 298
Msa1321330 AT3G21670.1 35.116 561 305 13 19 550 28 558 6.38e-94 299
Msa1321330 AT5G62680.1 31.699 571 344 11 23 561 46 602 2.31e-89 288
Msa1321330 AT1G27080.1 31.699 571 340 10 20 563 14 561 1.97e-88 285
Msa1321330 AT5G62730.1 33.031 551 336 12 20 554 56 589 3.88e-88 284
Msa1321330 AT5G62730.2 33.028 545 332 12 26 554 3 530 5.02e-87 280
Msa1321330 AT5G28470.2 31.429 560 339 11 2 537 5 543 7.28e-87 280
Msa1321330 AT3G47960.1 29.821 560 358 7 23 556 64 614 1.36e-85 279
Msa1321330 AT5G28470.1 31.250 560 338 12 2 537 5 541 6.62e-84 272
Msa1321330 AT1G69860.1 30.245 572 356 8 7 556 5 555 1.48e-82 268
Msa1321330 AT1G27080.2 31.481 540 320 10 51 563 3 519 1.48e-81 265
Msa1321330 AT3G45660.1 31.239 573 328 14 17 559 18 554 1.27e-80 263
Msa1321330 AT3G45660.3 31.239 573 328 14 17 559 18 554 1.27e-80 263
Msa1321330 AT3G45660.2 31.239 573 328 14 17 559 39 575 2.45e-80 263
Msa1321330 AT3G45650.1 30.465 581 347 13 1 556 1 549 2.90e-79 260
Msa1321330 AT3G45720.1 29.913 575 330 12 19 561 18 551 4.37e-76 251
Msa1321330 AT3G45680.1 28.014 589 366 12 1 564 1 556 2.43e-75 249
Msa1321330 AT3G25260.1 30.074 542 314 10 20 545 21 513 5.07e-75 248
Msa1321330 AT3G45700.1 28.522 575 355 11 1 556 1 538 2.08e-74 247
Msa1321330 AT3G45650.2 29.160 607 347 14 1 556 1 575 1.27e-73 246
Msa1321330 AT3G45710.1 27.179 585 370 11 1 560 1 554 3.22e-73 244
Msa1321330 AT3G25280.1 28.571 539 332 9 20 545 21 519 1.56e-68 231
Msa1321330 AT3G45690.1 26.372 565 325 12 18 561 16 510 9.24e-63 215
Msa1321330 AT2G38100.2 29.002 531 324 15 48 561 2 496 6.19e-57 199
Msa1321330 AT2G38100.3 29.002 531 324 15 48 561 24 518 1.35e-56 199
Msa1321330 AT2G38100.1 29.002 531 324 15 48 561 18 512 1.51e-56 199
Msa1321330 AT2G02020.2 35.739 291 170 1 22 295 44 334 1.30e-51 185
Msa1321330 AT2G02020.2 39.726 219 127 4 335 552 310 524 3.81e-46 170
Msa1321330 AT5G11570.1 26.032 557 308 14 11 547 4 476 1.68e-45 167

Find 145 sgRNAs with CRISPR-Local

Find 404 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGAGTACTATGTTTGGATTT+TGG 0.145938 8_4:-26801754 None:intergenic
CACACCTTGATGATTATTAT+TGG 0.205565 8_4:+26808575 Msa1321330:CDS
TGTGTTAAGTGCTGTTAATT+TGG 0.220123 8_4:+26808606 Msa1321330:CDS
AAAGGAGCACTACTAGAAAT+TGG 0.235775 8_4:-26801716 None:intergenic
CCATCACTCCACAACCAAAA+AGG 0.253088 8_4:+26801941 Msa1321330:CDS
CAATACTACCGATGTATATT+TGG 0.262174 8_4:+26808323 Msa1321330:CDS
AGGATGTTTGGGTCTTATAT+AGG 0.278963 8_4:-26801787 None:intergenic
TGCAACACGGTTATCCCATT+TGG 0.279245 8_4:-26808187 None:intergenic
GTCTTATATAGGGAAAATTA+TGG 0.289839 8_4:-26801776 None:intergenic
TGGAGCAAAGTATGATATTT+AGG 0.291619 8_4:-26806907 None:intergenic
GGCACTGGCACTCTTCCTAT+TGG 0.295547 8_4:+26806714 Msa1321330:CDS
GTTGGGTGGGGTGTGGGGTT+AGG 0.297522 8_4:+26806667 Msa1321330:CDS
ACTTGGGCCAGTCTTGTAAA+TGG 0.307105 8_4:-26806775 None:intergenic
GGACAATGTTGGGTGGGGTG+TGG 0.309070 8_4:+26806660 Msa1321330:intron
GACAATGTTGGGTGGGGTGT+GGG 0.321840 8_4:+26806661 Msa1321330:CDS
TTCATAGCTGATTCATATCT+TGG 0.330954 8_4:+26802314 Msa1321330:CDS
GTGTTAAGTGCTGTTAATTT+GGG 0.332355 8_4:+26808607 Msa1321330:CDS
CTCTTAGCATCCTTCTCTTC+CGG 0.334697 8_4:-26804863 None:intergenic
ACGAAGACTCGGTCGTATAT+TGG 0.344839 8_4:-26808136 None:intergenic
AAGTTTGAACACAAGGCTTA+TGG 0.351768 8_4:-26804811 None:intergenic
ACACCTTGATGATTATTATT+GGG 0.352520 8_4:+26808576 Msa1321330:CDS
GATTAATGTGCCACCTTGTT+TGG 0.353072 8_4:-26808035 None:intergenic
TCTCTTAGTCATGGTCATAT+TGG 0.356804 8_4:-26801665 None:intergenic
GGATGTTTGGGTCTTATATA+GGG 0.358242 8_4:-26801786 None:intergenic
TGATGATTATTATTGGGTTA+TGG 0.358619 8_4:+26808582 Msa1321330:CDS
GCCGGATGGACTGAGAAGTT+TGG 0.359481 8_4:+26808429 Msa1321330:CDS
TAAGAACATGATTGTTACTT+TGG 0.360556 8_4:+26808872 Msa1321330:three_prime_UTR
GGTTGGGAGATAACATCAAT+AGG 0.363887 8_4:+26808551 Msa1321330:CDS
CCCACCTATATTGATTTGTA+TGG 0.364822 8_4:-26806927 None:intergenic
TCCTCACTATTCCCTTTGCT+TGG 0.365982 8_4:+26802287 Msa1321330:CDS
AAGGAGCACTACTAGAAATT+GGG 0.368703 8_4:-26801715 None:intergenic
AATTATGGGAGTACTATGTT+TGG 0.371072 8_4:-26801761 None:intergenic
TTGGGCTATCTGCCATGATT+TGG 0.371956 8_4:-26801893 None:intergenic
ACAATGTTGGGTGGGGTGTG+GGG 0.374470 8_4:+26806662 Msa1321330:CDS
GCAACACGGTTATCCCATTT+GGG 0.378471 8_4:-26808186 None:intergenic
AGAAGTAACCAAGAGGGTTC+TGG 0.380275 8_4:+26808685 Msa1321330:CDS
TAGTTTACCTGAAGATATAC+TGG 0.387756 8_4:-26804947 None:intergenic
TGGTACTTGGGCATTGTGGC+TGG 0.394291 8_4:+26804902 Msa1321330:CDS
TATACTCACAATGGTTGTTT+CGG 0.398118 8_4:+26808237 Msa1321330:CDS
GCACTGGCACTCTTCCTATT+GGG 0.399093 8_4:+26806715 Msa1321330:CDS
CATCTTTCTCCTCTTCACTA+TGG 0.400638 8_4:-26806861 None:intergenic
TTCCCTCCAGCATCACTTCA+AGG 0.400965 8_4:+26808082 Msa1321330:CDS
GTCTTCACTCATTTATCTTG+TGG 0.402311 8_4:+26802358 Msa1321330:CDS
ATTAAACAAGTTAGCCATAC+AGG 0.402683 8_4:-26807974 None:intergenic
CCGGATGGACTGAGAAGTTT+GGG 0.404496 8_4:+26808430 Msa1321330:CDS
GGGTGTGGGGTTAGGAGTAT+TGG 0.406293 8_4:+26806675 Msa1321330:CDS
TACAGAAAGGAAAGCCCTAC+AGG 0.407761 8_4:+26806748 Msa1321330:CDS
CGGCTCTTGTAGAAACGAAA+AGG 0.407993 8_4:+26808257 Msa1321330:CDS
GGCTATCTGCCATGATTTGG+TGG 0.414389 8_4:-26801890 None:intergenic
TCACTATTCCCTTTGCTTGG+TGG 0.418464 8_4:+26802290 Msa1321330:CDS
AATTATAGTAGCATTATCTA+TGG 0.422696 8_4:-26808763 None:intergenic
AAATTCACCGGTCACCCAAA+TGG 0.425786 8_4:+26808172 Msa1321330:CDS
AATGAGTGAAGACAAGAGTA+TGG 0.428043 8_4:-26802348 None:intergenic
GAGATTTGCATACCAAGGTT+TGG 0.431626 8_4:+26802178 Msa1321330:CDS
TGGGGTGTGGGGATGAGAAA+AGG 0.434894 8_4:-26801734 None:intergenic
TATATAAGTATAGTAGGAGT+TGG 0.438611 8_4:+26808463 Msa1321330:CDS
TCTGATGCGTTTACTATCGT+TGG 0.439738 8_4:+26808379 Msa1321330:CDS
GCACTTTATGTGCTTTCCAT+TGG 0.444806 8_4:+26804779 Msa1321330:CDS
CTCTTTCTATCTCTTAGTCA+TGG 0.448007 8_4:-26801674 None:intergenic
TTAATTTGGGTGTTTATATG+TGG 0.449648 8_4:+26808620 Msa1321330:CDS
GGCTACAATAGATATCGTTC+TGG 0.462037 8_4:+26808706 Msa1321330:CDS
TGCTCCATACAAATCAATAT+AGG 0.469329 8_4:+26806923 Msa1321330:CDS
GTTTATACCAGTATATCTTC+AGG 0.469782 8_4:+26804940 Msa1321330:CDS
AGGAGTGTTGGCATTGGCAC+TGG 0.470976 8_4:+26806699 Msa1321330:CDS
AATTCACCGGTCACCCAAAT+GGG 0.480800 8_4:+26808173 Msa1321330:CDS
TTGTCGCCGCAGCTCGCAAG+TGG 0.488259 8_4:+26806800 Msa1321330:CDS
GGTTATCCCATTTGGGTGAC+CGG 0.488655 8_4:-26808179 None:intergenic
TAGCAAGTGGCACGAAGACT+CGG 0.490850 8_4:-26808147 None:intergenic
GCGGCGTATATAAGTATAGT+AGG 0.493249 8_4:+26808457 Msa1321330:CDS
GGCTCTTGTAGAAACGAAAA+GGG 0.495860 8_4:+26808258 Msa1321330:CDS
GGTTGTGGAGTGATGGATGA+GGG 0.501318 8_4:-26801934 None:intergenic
TATTGTAGCCAGAACCCTCT+TGG 0.501499 8_4:-26808693 None:intergenic
ACGAGGCCTTGAAGTGATGC+TGG 0.507942 8_4:-26808088 None:intergenic
AGGAGTATTGGCAGGAGTGT+TGG 0.511573 8_4:+26806687 Msa1321330:CDS
TCTTATATAGGGAAAATTAT+GGG 0.512640 8_4:-26801775 None:intergenic
CGTGTCGTCGTCGAACTGAT+CGG 0.522709 8_4:-26804840 None:intergenic
CACGCGCCACTTGCGAGCTG+CGG 0.524318 8_4:-26806806 None:intergenic
CTTGTAAATGGACTCCCTGT+AGG 0.524715 8_4:-26806763 None:intergenic
CGTATATTGGAACAACGAAA+AGG 0.524827 8_4:-26808123 None:intergenic
CAAAACTCACCACCAAATCA+TGG 0.526335 8_4:+26801881 Msa1321330:exon
CATTATAATTGAAGTTGTTG+AGG 0.528014 8_4:+26808501 Msa1321330:CDS
TGGTTGTGGAGTGATGGATG+AGG 0.528098 8_4:-26801935 None:intergenic
TCTTCCTATTGGGAATCAAA+AGG 0.529313 8_4:+26806725 Msa1321330:CDS
CCCAAACTTCTCAGTCCATC+CGG 0.530963 8_4:-26808430 None:intergenic
GTGCAAAAGCTGGTGAGAAA+TGG 0.533099 8_4:+26808530 Msa1321330:CDS
TACTACCGATGTATATTTGG+TGG 0.535981 8_4:+26808326 Msa1321330:CDS
CGACGACACGCCGGAAGAGA+AGG 0.536664 8_4:+26804853 Msa1321330:CDS
TTCTTCGTCTAATCCCTGTA+TGG 0.537187 8_4:+26807960 Msa1321330:CDS
TAACCCAATAATAATCATCA+AGG 0.540319 8_4:-26808579 None:intergenic
CTATGAAGCCACCAAGCAAA+GGG 0.542359 8_4:-26802298 None:intergenic
TTTCTTGACACTTTCAGTGT+CGG 0.543156 8_4:+26804727 Msa1321330:CDS
AGTAGCATTATCTATGGCAA+AGG 0.544789 8_4:-26808757 None:intergenic
ATAACCGTGTTGCAAAGAAT+CGG 0.549285 8_4:+26808196 Msa1321330:CDS
GTGCTTTCCATTGGTGAAGG+AGG 0.549336 8_4:+26804788 Msa1321330:CDS
TTGTAAATGGACTCCCTGTA+GGG 0.551151 8_4:-26806762 None:intergenic
AGGGAGTCCATTTACAAGAC+TGG 0.553305 8_4:+26806768 Msa1321330:CDS
AATTCAGGACAATGTTGGGT+GGG 0.554992 8_4:+26806654 Msa1321330:intron
TATGTGCTTTCCATTGGTGA+AGG 0.555245 8_4:+26804785 Msa1321330:CDS
GAACTTACATATGATGAAGA+TGG 0.559904 8_4:-26801979 None:intergenic
CAAACAAAACAAGAAATCCA+TGG 0.560424 8_4:+26807897 Msa1321330:CDS
ATTGGCAGGAGTGTTGGCAT+TGG 0.560470 8_4:+26806693 Msa1321330:CDS
CACACATATTTCACCAAACA+AGG 0.565863 8_4:+26808022 Msa1321330:CDS
GTTGGGAGATAACATCAATA+GGG 0.567469 8_4:+26808552 Msa1321330:CDS
TGAGATTTGATGCCAAACCT+TGG 0.567641 8_4:-26802190 None:intergenic
GTCACTGAACATAATCTCCA+TGG 0.569399 8_4:-26807914 None:intergenic
AGTAAACGCATCAGAGATGC+CGG 0.575326 8_4:-26808371 None:intergenic
AGGAGCACTACTAGAAATTG+GGG 0.577948 8_4:-26801714 None:intergenic
GCTATGAAGCCACCAAGCAA+AGG 0.578420 8_4:-26802299 None:intergenic
GGGAATCAAAAGGTACAGAA+AGG 0.580406 8_4:+26806735 Msa1321330:CDS
CTTCCTCAATATATGATCAC+CGG 0.580732 8_4:+26808352 Msa1321330:CDS
ATTCAGGACAATGTTGGGTG+GGG 0.582595 8_4:+26806655 Msa1321330:intron
GCTGAGAGATTTGCATACCA+AGG 0.590021 8_4:+26802173 Msa1321330:CDS
TTAAACAAGTTAGCCATACA+GGG 0.590363 8_4:-26807973 None:intergenic
AAAGCTGGTGAGAAATGGTT+GGG 0.591814 8_4:+26808535 Msa1321330:CDS
GGCCTTGAAGTGATGCTGGA+GGG 0.597498 8_4:-26808084 None:intergenic
GTGTTGCAAAGAATCGGAGT+TGG 0.599308 8_4:+26808202 Msa1321330:CDS
CTTATGGCCTCCTTCACCAA+TGG 0.600332 8_4:-26804795 None:intergenic
GTGGGGTTAGGAGTATTGGC+AGG 0.603352 8_4:+26806679 Msa1321330:CDS
ATGCCGGTGATCATATATTG+AGG 0.604323 8_4:-26808355 None:intergenic
GTTAATGTTGCTAAAAGTCA+CGG 0.605449 8_4:+26808280 Msa1321330:CDS
AAATTCAGGACAATGTTGGG+TGG 0.606854 8_4:+26806653 Msa1321330:intron
AACTCCGATTCTTTGCAACA+CGG 0.606929 8_4:-26808200 None:intergenic
GCGGCGAAAGTTTGAACACA+AGG 0.613912 8_4:-26804818 None:intergenic
AGGCCTTGAAGTGATGCTGG+AGG 0.615708 8_4:-26808085 None:intergenic
AAAAGCTGGTGAGAAATGGT+TGG 0.619989 8_4:+26808534 Msa1321330:CDS
ACTGAGAAGTTTGGGAGCCG+CGG 0.621166 8_4:+26808438 Msa1321330:CDS
TTCTGGAGTGTAGTAAAACA+AGG 0.625507 8_4:+26808723 Msa1321330:exon
TTTAGTGATGATAATGTTGG+GGG 0.628840 8_4:-26801827 None:intergenic
GGTCGAACATGAACATGATG+AGG 0.633947 8_4:-26806886 None:intergenic
ACAGAAAGGAAAGCCCTACA+GGG 0.634031 8_4:+26806749 Msa1321330:CDS
CCACTTGCTAGAAAATTCAC+CGG 0.636988 8_4:+26808160 Msa1321330:CDS
GACTAAGAGATAGAAAGAGA+AGG 0.637674 8_4:+26801678 Msa1321330:five_prime_UTR
TTGGTGGTACTTGGGCATTG+TGG 0.645431 8_4:+26804898 Msa1321330:CDS
GTCGTCGTCGAACTGATCGG+CGG 0.646189 8_4:-26804837 None:intergenic
GAGGCAATTAGTGCAAAAGC+TGG 0.647395 8_4:+26808520 Msa1321330:CDS
GGCACATTAATCCATACCCT+AGG 0.652827 8_4:+26808046 Msa1321330:CDS
GATGAAAGAAGTAACCAAGA+GGG 0.661163 8_4:+26808679 Msa1321330:CDS
GCATCACTTCAAGGCCTCGT+CGG 0.670950 8_4:+26808091 Msa1321330:CDS
ACCAAGCAAAGGGAATAGTG+AGG 0.678777 8_4:-26802288 None:intergenic
TCAGTTCGACGACGACACGC+CGG 0.683054 8_4:+26804844 Msa1321330:CDS
AGTAACCACCAAATATACAT+CGG 0.684698 8_4:-26808331 None:intergenic
AGATGAAAGAAGTAACCAAG+AGG 0.693348 8_4:+26808678 Msa1321330:CDS
ACATATTTCACCAAACAAGG+TGG 0.708994 8_4:+26808025 Msa1321330:CDS
TACTATACTTATATACGCCG+CGG 0.710647 8_4:-26808455 None:intergenic
AAAGGATCGTGACTCCGACG+AGG 0.738339 8_4:-26808105 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTATATGATATAATATAAAA+AGG - chr8_4:26802142-26802161 None:intergenic 10.0%
!! TATACATTAGTTAAAAAATA+TGG - chr8_4:26803570-26803589 None:intergenic 10.0%
!! TAGATAATTAAAGTTATTAA+CGG + chr8_4:26803663-26803682 Msa1321330:intron 10.0%
!! AAAATTATATGGTTTAATTA+GGG - chr8_4:26804358-26804377 None:intergenic 10.0%
!! AAAAATTATATGGTTTAATT+AGG - chr8_4:26804359-26804378 None:intergenic 10.0%
!! ACTAATATATTAATTAAGTT+GGG - chr8_4:26804383-26804402 None:intergenic 10.0%
!! TACTAATATATTAATTAAGT+TGG - chr8_4:26804384-26804403 None:intergenic 10.0%
!!! TTATTTTATTAGTTGAAATT+TGG - chr8_4:26806445-26806464 None:intergenic 10.0%
!!! ATAAATAAATAGTTTTGATT+GGG - chr8_4:26807367-26807386 None:intergenic 10.0%
!! ATAATCGAATTAAATATATA+TGG - chr8_4:26807511-26807530 None:intergenic 10.0%
!! GATCAATTATATAATGAAAA+GGG - chr8_4:26802018-26802037 None:intergenic 15.0%
!! TGATCAATTATATAATGAAA+AGG - chr8_4:26802019-26802038 None:intergenic 15.0%
!! TTTCATTATATAATTGATCA+TGG + chr8_4:26802019-26802038 Msa1321330:intron 15.0%
!! CAATTACATGATTAAAAAAT+GGG - chr8_4:26802111-26802130 None:intergenic 15.0%
!! TCAATTACATGATTAAAAAA+TGG - chr8_4:26802112-26802131 None:intergenic 15.0%
!! TATATTATATCATATAGTTG+TGG + chr8_4:26802145-26802164 Msa1321330:intron 15.0%
!!! TTGATAATTTATATATAGAG+CGG + chr8_4:26802495-26802514 Msa1321330:intron 15.0%
!!! TTTATTGATTGTAATTAATG+CGG - chr8_4:26803291-26803310 None:intergenic 15.0%
!! AAATTAAAGATAGATATCAT+AGG - chr8_4:26803783-26803802 None:intergenic 15.0%
!! AGGTTAAAAATTAAGTATAA+AGG - chr8_4:26804206-26804225 None:intergenic 15.0%
!! AAAAATATTCTTAATTGAAG+GGG - chr8_4:26804269-26804288 None:intergenic 15.0%
!! CAAAAATATTCTTAATTGAA+GGG - chr8_4:26804270-26804289 None:intergenic 15.0%
!! TCAAAAATATTCTTAATTGA+AGG - chr8_4:26804271-26804290 None:intergenic 15.0%
!!! CTAATATATTAATTAAGTTG+GGG - chr8_4:26804382-26804401 None:intergenic 15.0%
!! AGAAAATATGATATTATGAT+GGG - chr8_4:26804446-26804465 None:intergenic 15.0%
!! AAGAAAATATGATATTATGA+TGG - chr8_4:26804447-26804466 None:intergenic 15.0%
!! AAAAATTATTCACATAAAGT+TGG - chr8_4:26804473-26804492 None:intergenic 15.0%
!! CAAAGAATTTCTTTATATTA+AGG - chr8_4:26805572-26805591 None:intergenic 15.0%
!!! ACAAATTAAGTTGTTTATTA+CGG - chr8_4:26805606-26805625 None:intergenic 15.0%
!!! AAGTTTTTTACATTTTTTTC+TGG + chr8_4:26805888-26805907 Msa1321330:intron 15.0%
!!! GATTTTTATTTATAAAAGAC+TGG + chr8_4:26806116-26806135 Msa1321330:intron 15.0%
!! ATGTATGATTCTAATTATAA+TGG + chr8_4:26806587-26806606 Msa1321330:intron 15.0%
!!! TAATTTAAAGTTAGAAAGAA+TGG - chr8_4:26806955-26806974 None:intergenic 15.0%
!! TGAAATGAATATATTAACAA+AGG - chr8_4:26806979-26806998 None:intergenic 15.0%
!!! CATAAATAAATAGTTTTGAT+TGG - chr8_4:26807368-26807387 None:intergenic 15.0%
!! CATATAAAAATTTGATGAAT+TGG - chr8_4:26807476-26807495 None:intergenic 15.0%
!!! CAATTCATCAAATTTTTATA+TGG + chr8_4:26807474-26807493 Msa1321330:intron 15.0%
!!! TTTAATAGGTTAATTTGTTA+TGG + chr8_4:26807661-26807680 Msa1321330:intron 15.0%
!!! TTAATAGGTTAATTTGTTAT+GGG + chr8_4:26807662-26807681 Msa1321330:intron 15.0%
!! TCTTATATAGGGAAAATTAT+GGG - chr8_4:26801778-26801797 None:intergenic 20.0%
!!! TTTTTAGTGATGATAATGTT+GGG - chr8_4:26801832-26801851 None:intergenic 20.0%
!!! ATTTTTAGTGATGATAATGT+TGG - chr8_4:26801833-26801852 None:intergenic 20.0%
!! TTTAATCATGTAATTGACTA+TGG + chr8_4:26802115-26802134 Msa1321330:intron 20.0%
!!! TTTGTATCGTTCAATTTTAT+AGG + chr8_4:26802663-26802682 Msa1321330:intron 20.0%
!!! GGAGTTTTATTATAATGAAT+GGG + chr8_4:26802819-26802838 Msa1321330:intron 20.0%
!!! GAGTTTTATTATAATGAATG+GGG + chr8_4:26802820-26802839 Msa1321330:intron 20.0%
!! TATTATTGTTGTATAGGATT+TGG - chr8_4:26802877-26802896 None:intergenic 20.0%
!! AATCCTATACAACAATAATA+TGG + chr8_4:26802877-26802896 Msa1321330:intron 20.0%
!!! TTAAAGGGACAATTATTTTA+AGG - chr8_4:26803195-26803214 None:intergenic 20.0%
!!! TGTTGTCTTGATATTTTAAA+GGG - chr8_4:26803210-26803229 None:intergenic 20.0%
!!! ATGTTGTCTTGATATTTTAA+AGG - chr8_4:26803211-26803230 None:intergenic 20.0%
!! ATTGTAAAGTTAGAAAATCA+AGG + chr8_4:26803464-26803483 Msa1321330:intron 20.0%
!! TTGTAAAGTTAGAAAATCAA+GGG + chr8_4:26803465-26803484 Msa1321330:intron 20.0%
!! TAGTTGACCAAAATAAATAA+AGG - chr8_4:26804132-26804151 None:intergenic 20.0%
!! TTCCAAATAATTTCAAATCT+AGG + chr8_4:26804166-26804185 Msa1321330:intron 20.0%
!!! ATCCTAGATTTGAAATTATT+TGG - chr8_4:26804171-26804190 None:intergenic 20.0%
!!! TATTGACTTATATAATAGAG+AGG + chr8_4:26805199-26805218 Msa1321330:intron 20.0%
!!! GAATCAAATTTTCTTAATTG+TGG + chr8_4:26805335-26805354 Msa1321330:intron 20.0%
!! TTTCTAAATCTTTATCTACA+AGG - chr8_4:26805510-26805529 None:intergenic 20.0%
!! TATGAAAATATCTTACGATA+TGG - chr8_4:26805796-26805815 None:intergenic 20.0%
!!! TTATCAGTCACTTTTTTTTT+TGG + chr8_4:26805974-26805993 Msa1321330:intron 20.0%
!! AAAGTAATCAACAAAATGAT+TGG + chr8_4:26806060-26806079 Msa1321330:intron 20.0%
!! TAATTGGAAAATTATGTGAT+TGG + chr8_4:26806364-26806383 Msa1321330:intron 20.0%
!!! TACTTTTGAAAAGAAAATTG+AGG + chr8_4:26807134-26807153 Msa1321330:intron 20.0%
!! AAAGAAAATTGAGGATTATT+AGG + chr8_4:26807143-26807162 Msa1321330:intron 20.0%
!!! TCATCAAATTTTTATATGGT+AGG + chr8_4:26807478-26807497 Msa1321330:intron 20.0%
!!! TAAGAATATGCTTTTTAGTA+TGG - chr8_4:26807800-26807819 None:intergenic 20.0%
!!! ATACTAAAAAGCATATTCTT+AGG + chr8_4:26807799-26807818 Msa1321330:intron 20.0%
!!! AATAATTTGCAACAGATTTT+TGG + chr8_4:26807841-26807860 Msa1321330:intron 20.0%
!!! ATTTTTATCTATACTCACAA+TGG + chr8_4:26808228-26808247 Msa1321330:CDS 20.0%
!!! AATTTTTTATGATCAAATGC+CGG + chr8_4:26808411-26808430 Msa1321330:CDS 20.0%
!!! AAAGTGTTTTGAGTATAAAA+AGG + chr8_4:26808648-26808667 Msa1321330:CDS 20.0%
!! AATTATAGTAGCATTATCTA+TGG - chr8_4:26808766-26808785 None:intergenic 20.0%
! GTCTTATATAGGGAAAATTA+TGG - chr8_4:26801779-26801798 None:intergenic 25.0%
!!! TTTTAGTGATGATAATGTTG+GGG - chr8_4:26801831-26801850 None:intergenic 25.0%
! AGGAAAGAATAATAATTGAG+GGG - chr8_4:26802074-26802093 None:intergenic 25.0%
! GAGGAAAGAATAATAATTGA+GGG - chr8_4:26802075-26802094 None:intergenic 25.0%
! TTTATATATAGAGCGGAAAA+CGG + chr8_4:26802502-26802521 Msa1321330:intron 25.0%
! TCACATTATATAGACATTAG+CGG - chr8_4:26802547-26802566 None:intergenic 25.0%
! ATACAAACAAGATTAGCATA+AGG - chr8_4:26802650-26802669 None:intergenic 25.0%
!!! CAATTTATAGCTTTAGTTCA+TGG + chr8_4:26802727-26802746 Msa1321330:intron 25.0%
!!! CGGAGTTTTATTATAATGAA+TGG + chr8_4:26802818-26802837 Msa1321330:intron 25.0%
! TTGTATAGGATTTGGATTTA+CGG - chr8_4:26802869-26802888 None:intergenic 25.0%
! CAACCATATTATTGTTGTAT+AGG - chr8_4:26802883-26802902 None:intergenic 25.0%
! AGAGAGAGAAAGAAAATAAA+GGG - chr8_4:26802932-26802951 None:intergenic 25.0%
! AAGAGAGAGAAAGAAAATAA+AGG - chr8_4:26802933-26802952 None:intergenic 25.0%
! TGAAGTAGTACTGTATTATT+TGG + chr8_4:26803417-26803436 Msa1321330:intron 25.0%
! GAAGTAGTACTGTATTATTT+GGG + chr8_4:26803418-26803437 Msa1321330:intron 25.0%
!!! ATTGGACAAGTATTTTGAAA+CGG - chr8_4:26803511-26803530 None:intergenic 25.0%
!! AAGTTCTTTAAAGAATGATC+CGG + chr8_4:26803934-26803953 Msa1321330:intron 25.0%
!! ATTAAAGGCACATAATAGTT+CGG - chr8_4:26804050-26804069 None:intergenic 25.0%
! GTGACAGTTATTAATAAAGT+TGG - chr8_4:26804082-26804101 None:intergenic 25.0%
!!! ATGCACTCCTTTATTTATTT+TGG + chr8_4:26804122-26804141 Msa1321330:intron 25.0%
!! TAAGTTGGGGAAAAATTATA+TGG - chr8_4:26804369-26804388 None:intergenic 25.0%
! CAAATCTTGAAATGGAATAT+TGG - chr8_4:26804553-26804572 None:intergenic 25.0%
! GACAAATAATATACAGGAAT+AGG - chr8_4:26804583-26804602 None:intergenic 25.0%
! AATGAGGACAAATAATATAC+AGG - chr8_4:26804589-26804608 None:intergenic 25.0%
!!! CAAAATTTTGCTTTAGCTTA+TGG + chr8_4:26804658-26804677 Msa1321330:intron 25.0%
!!! CTAAGAGTTCATTTTTCAAT+TGG + chr8_4:26804879-26804898 Msa1321330:CDS 25.0%
! TTACAGAAAAAAACAAGACA+AGG + chr8_4:26805120-26805139 Msa1321330:intron 25.0%
! TACAGAAAAAAACAAGACAA+GGG + chr8_4:26805121-26805140 Msa1321330:intron 25.0%
! ATTGTAAAAGTCAGTGTATA+TGG - chr8_4:26805238-26805257 None:intergenic 25.0%
! TAAAGAATTTCTGATCAGTT+TGG - chr8_4:26805533-26805552 None:intergenic 25.0%
! TTGTTTATTACGGAGTTTAT+TGG - chr8_4:26805596-26805615 None:intergenic 25.0%
!! TAAAAAACTTAGAGCTTGTT+TGG - chr8_4:26805878-26805897 None:intergenic 25.0%
!! CAATAGAACTCAATTACTTT+TGG - chr8_4:26805914-26805933 None:intergenic 25.0%
! ATCAATATTTGATTCTGCAT+TGG - chr8_4:26806099-26806118 None:intergenic 25.0%
!! CACATAATTTTCCAATTAGA+TGG - chr8_4:26806362-26806381 None:intergenic 25.0%
! AAAAAATTCAGGACAATGTT+GGG + chr8_4:26806650-26806669 Msa1321330:intron 25.0%
! AGTGAAAGACAAGTTATATA+TGG + chr8_4:26807221-26807240 Msa1321330:intron 25.0%
! TTTACCCATTGATAAAAAGT+CGG + chr8_4:26807318-26807337 Msa1321330:intron 25.0%
! GAATTAAATATATATGGCGT+AGG - chr8_4:26807505-26807524 None:intergenic 25.0%
!! TGTTTGATGATAAATGTTAG+AGG + chr8_4:26807592-26807611 Msa1321330:intron 25.0%
!!! GAATTGAAATTTTGATCCTA+GGG - chr8_4:26808065-26808084 None:intergenic 25.0%
! TATATAAGTATAGTAGGAGT+TGG + chr8_4:26808463-26808482 Msa1321330:CDS 25.0%
! CATTATAATTGAAGTTGTTG+AGG + chr8_4:26808501-26808520 Msa1321330:CDS 25.0%
!! ACACCTTGATGATTATTATT+GGG + chr8_4:26808576-26808595 Msa1321330:CDS 25.0%
! TAACCCAATAATAATCATCA+AGG - chr8_4:26808582-26808601 None:intergenic 25.0%
! TGATGATTATTATTGGGTTA+TGG + chr8_4:26808582-26808601 Msa1321330:CDS 25.0%
!! TTAATTTGGGTGTTTATATG+TGG + chr8_4:26808620-26808639 Msa1321330:CDS 25.0%
! TTTGAGTATAAAAAGGTAGA+TGG + chr8_4:26808655-26808674 Msa1321330:CDS 25.0%
!! TAAGAACATGATTGTTACTT+TGG + chr8_4:26808872-26808891 Msa1321330:three_prime_UTR 25.0%
!!! TAGAAATTGGGGTTTTGATT+TGG - chr8_4:26801706-26801725 None:intergenic 30.0%
! AGTACTATGTTTGGATTTTG+GGG - chr8_4:26801755-26801774 None:intergenic 30.0%
! GAGTACTATGTTTGGATTTT+GGG - chr8_4:26801756-26801775 None:intergenic 30.0%
!! AATTATGGGAGTACTATGTT+TGG - chr8_4:26801764-26801783 None:intergenic 30.0%
! TTTAGTGATGATAATGTTGG+GGG - chr8_4:26801830-26801849 None:intergenic 30.0%
!! TTTTGTTTAGGATGATGAGT+TGG - chr8_4:26801866-26801885 None:intergenic 30.0%
GAACTTACATATGATGAAGA+TGG - chr8_4:26801982-26802001 None:intergenic 30.0%
GGAAAGAATAATAATTGAGG+GGG - chr8_4:26802073-26802092 None:intergenic 30.0%
GGAGGAAAGAATAATAATTG+AGG - chr8_4:26802076-26802095 None:intergenic 30.0%
CATGATTAAAAAATGGGTGT+TGG - chr8_4:26802105-26802124 None:intergenic 30.0%
! GTTCATTCAGAAATTTTGTG+AGG - chr8_4:26802223-26802242 None:intergenic 30.0%
! TTCATAGCTGATTCATATCT+TGG + chr8_4:26802314-26802333 Msa1321330:CDS 30.0%
ATATAGACATTAGCGGAAAA+CGG - chr8_4:26802540-26802559 None:intergenic 30.0%
! TTACAATTCACTCGTTTTAC+AGG - chr8_4:26803451-26803470 None:intergenic 30.0%
ATAGTGCACATTGCAAAAAT+TGG - chr8_4:26803529-26803548 None:intergenic 30.0%
!! CTTGGACATGTATTTTGAAA+CGG + chr8_4:26803723-26803742 Msa1321330:intron 30.0%
!! TTCTAAATTAAGAGTGCTTC+AGG - chr8_4:26803838-26803857 None:intergenic 30.0%
! TTGCTCACTTTAAAGAAACA+GGG + chr8_4:26804023-26804042 Msa1321330:intron 30.0%
! TATTAATAAAGTTGGCTCCA+AGG - chr8_4:26804074-26804093 None:intergenic 30.0%
GAGCTAAGTGATAAAAAAAG+AGG - chr8_4:26804226-26804245 None:intergenic 30.0%
GAAATGTGCAAATCTTGAAA+TGG - chr8_4:26804561-26804580 None:intergenic 30.0%
!! AGAGTTCATTTTTCAATTGG+TGG + chr8_4:26804882-26804901 Msa1321330:CDS 30.0%
!! ATTTTTCAATTGGTGGTACT+TGG + chr8_4:26804889-26804908 Msa1321330:CDS 30.0%
!! TTTTTCAATTGGTGGTACTT+GGG + chr8_4:26804890-26804909 Msa1321330:CDS 30.0%
GTTTATACCAGTATATCTTC+AGG + chr8_4:26804940-26804959 Msa1321330:CDS 30.0%
TAGTTTACCTGAAGATATAC+TGG - chr8_4:26804950-26804969 None:intergenic 30.0%
!!! TACTTTTTCATCTAGCATAG+AGG + chr8_4:26805168-26805187 Msa1321330:intron 30.0%
AAAAGTCAGTGTATATGGTA+GGG - chr8_4:26805233-26805252 None:intergenic 30.0%
TAAAAGTCAGTGTATATGGT+AGG - chr8_4:26805234-26805253 None:intergenic 30.0%
! GTGACATATCTCAACTATTT+TGG + chr8_4:26805408-26805427 Msa1321330:intron 30.0%
!!! AGTCACTTTTTTTTTTGGAG+AGG + chr8_4:26805979-26805998 Msa1321330:intron 30.0%
CATAGTTATACAAGTTAACG+TGG - chr8_4:26806022-26806041 None:intergenic 30.0%
!! TTATAAAAGACTGGTTTGCA+AGG + chr8_4:26806125-26806144 Msa1321330:intron 30.0%
GATTGGAATTAGTTCACTAA+AGG + chr8_4:26806381-26806400 Msa1321330:intron 30.0%
CAAAAAATTCAGGACAATGT+TGG + chr8_4:26806649-26806668 Msa1321330:intron 30.0%
GGCAAAAATTGTTACTATGA+AGG - chr8_4:26806843-26806862 None:intergenic 30.0%
TGGAGCAAAGTATGATATTT+AGG - chr8_4:26806910-26806929 None:intergenic 30.0%
TGCTCCATACAAATCAATAT+AGG + chr8_4:26806923-26806942 Msa1321330:CDS 30.0%
TCCATACAAATCAATATAGG+TGG + chr8_4:26806926-26806945 Msa1321330:intron 30.0%
CCATACAAATCAATATAGGT+GGG + chr8_4:26806927-26806946 Msa1321330:intron 30.0%
! TCTCTTTTTACACTAGATGA+TGG + chr8_4:26807055-26807074 Msa1321330:intron 30.0%
!!! TTTTTACACTAGATGATGGA+TGG + chr8_4:26807059-26807078 Msa1321330:intron 30.0%
!!! TTTTACACTAGATGATGGAT+GGG + chr8_4:26807060-26807079 Msa1321330:intron 30.0%
ATGGTTGAGCAAAATTTATG+TGG + chr8_4:26807183-26807202 Msa1321330:intron 30.0%
TTATGTGGTTGAGGATTATT+AGG + chr8_4:26807198-26807217 Msa1321330:intron 30.0%
ATGGTTGAGCAAAATTTATG+TGG + chr8_4:26807183-26807202 Msa1321330:intron 30.0%
TGGTTGAGCAAAATTTATGT+GGG + chr8_4:26807184-26807203 Msa1321330:intron 30.0%
!!! GTTACCGACTTTTTATCAAT+GGG - chr8_4:26807325-26807344 None:intergenic 30.0%
!!! TGTTACCGACTTTTTATCAA+TGG - chr8_4:26807326-26807345 None:intergenic 30.0%
CTTTGTTACCCATCAATAAA+AGG - chr8_4:26807447-26807466 None:intergenic 30.0%
GACAAGTGACAAACTTTAAT+AGG + chr8_4:26807647-26807666 Msa1321330:intron 30.0%
!! TTAATTTGTTATGGGCATGT+AGG + chr8_4:26807670-26807689 Msa1321330:intron 30.0%
CTATCAAACAACAAACACAA+AGG - chr8_4:26807754-26807773 None:intergenic 30.0%
!!! TGGATTTCTTGTTTTGTTTG+AGG - chr8_4:26807897-26807916 None:intergenic 30.0%
CAAACAAAACAAGAAATCCA+TGG + chr8_4:26807897-26807916 Msa1321330:CDS 30.0%
TTAAACAAGTTAGCCATACA+GGG - chr8_4:26807976-26807995 None:intergenic 30.0%
ATTAAACAAGTTAGCCATAC+AGG - chr8_4:26807977-26807996 None:intergenic 30.0%
!! GGAATTGAAATTTTGATCCT+AGG - chr8_4:26808066-26808085 None:intergenic 30.0%
TATACTCACAATGGTTGTTT+CGG + chr8_4:26808237-26808256 Msa1321330:CDS 30.0%
GTTAATGTTGCTAAAAGTCA+CGG + chr8_4:26808280-26808299 Msa1321330:CDS 30.0%
CAATACTACCGATGTATATT+TGG + chr8_4:26808323-26808342 Msa1321330:CDS 30.0%
AGTAACCACCAAATATACAT+CGG - chr8_4:26808334-26808353 None:intergenic 30.0%
! CACACCTTGATGATTATTAT+TGG + chr8_4:26808575-26808594 Msa1321330:CDS 30.0%
! TGTGTTAAGTGCTGTTAATT+TGG + chr8_4:26808606-26808625 Msa1321330:CDS 30.0%
! GTGTTAAGTGCTGTTAATTT+GGG + chr8_4:26808607-26808626 Msa1321330:CDS 30.0%
TCTCTTAGTCATGGTCATAT+TGG - chr8_4:26801668-26801687 None:intergenic 35.0%
CTCTTTCTATCTCTTAGTCA+TGG - chr8_4:26801677-26801696 None:intergenic 35.0%
GACTAAGAGATAGAAAGAGA+AGG + chr8_4:26801678-26801697 Msa1321330:five_prime_UTR 35.0%
!! AAGGAGCACTACTAGAAATT+GGG - chr8_4:26801718-26801737 None:intergenic 35.0%
!! AAAGGAGCACTACTAGAAAT+TGG - chr8_4:26801719-26801738 None:intergenic 35.0%
!! GGAGTACTATGTTTGGATTT+TGG - chr8_4:26801757-26801776 None:intergenic 35.0%
! GGATGTTTGGGTCTTATATA+GGG - chr8_4:26801789-26801808 None:intergenic 35.0%
! AGGATGTTTGGGTCTTATAT+AGG - chr8_4:26801790-26801809 None:intergenic 35.0%
!! TGATTTTGGAGAGGATGTTT+GGG - chr8_4:26801801-26801820 None:intergenic 35.0%
!! ATGATTTTGGAGAGGATGTT+TGG - chr8_4:26801802-26801821 None:intergenic 35.0%
!!! TTTGGTGGTGAGTTTTGTTT+AGG - chr8_4:26801878-26801897 None:intergenic 35.0%
!!! AGTTACTTTTGCTCTTGCTT+GGG - chr8_4:26801914-26801933 None:intergenic 35.0%
!! AAAAATGGGTGTTGGAGATT+TGG - chr8_4:26802097-26802116 None:intergenic 35.0%
AGTGAAAAACGTGAACACAT+GGG + chr8_4:26802256-26802275 Msa1321330:CDS 35.0%
AATGAGTGAAGACAAGAGTA+TGG - chr8_4:26802351-26802370 None:intergenic 35.0%
GTCTTCACTCATTTATCTTG+TGG + chr8_4:26802358-26802377 Msa1321330:CDS 35.0%
ACAAGATTAGCATAAGGTAG+AGG - chr8_4:26802644-26802663 None:intergenic 35.0%
TAGTTCATGGTTCTTGATTC+TGG + chr8_4:26802740-26802759 Msa1321330:intron 35.0%
! ATGCAACACTTTGTCTTTTG+CGG + chr8_4:26802798-26802817 Msa1321330:intron 35.0%
TGTGTGATATGTTAGTGATG+TGG - chr8_4:26802962-26802981 None:intergenic 35.0%
!!! GACAAGTATTTTGAAACGGA+TGG - chr8_4:26803507-26803526 None:intergenic 35.0%
!!! GACATGTATTTTGAAACGGA+GGG + chr8_4:26803727-26803746 Msa1321330:intron 35.0%
! TTCTTTAAAGAATGATCCGG+AGG + chr8_4:26803937-26803956 Msa1321330:intron 35.0%
! GTTGCTCACTTTAAAGAAAC+AGG + chr8_4:26804022-26804041 Msa1321330:intron 35.0%
ATTATGTGCCTTTAATGCCT+TGG + chr8_4:26804054-26804073 Msa1321330:intron 35.0%
!! ATGGGCTTAGTTTGATAATG+AGG - chr8_4:26804605-26804624 None:intergenic 35.0%
TAAATTGCAAGTGCATGCAT+GGG - chr8_4:26804623-26804642 None:intergenic 35.0%
TTAAATTGCAAGTGCATGCA+TGG - chr8_4:26804624-26804643 None:intergenic 35.0%
! TTGCTTTAGCTTATGGTTGA+TGG + chr8_4:26804665-26804684 Msa1321330:intron 35.0%
TTTCTTGACACTTTCAGTGT+CGG + chr8_4:26804727-26804746 Msa1321330:CDS 35.0%
AAGTTTGAACACAAGGCTTA+TGG - chr8_4:26804814-26804833 None:intergenic 35.0%
! TGGCTTTTACTTTGTACCTT+TGG + chr8_4:26805428-26805447 Msa1321330:intron 35.0%
! GACTAGTTATAGTCTTGGTT+TGG - chr8_4:26805488-26805507 None:intergenic 35.0%
!! ACAAGGACTAGTTATAGTCT+TGG - chr8_4:26805493-26805512 None:intergenic 35.0%
AAACACTTGTGAGATTGCTT+AGG - chr8_4:26805825-26805844 None:intergenic 35.0%
AGAAACCAGTTTCACCAAAA+TGG + chr8_4:26806297-26806316 Msa1321330:intron 35.0%
GAAACCAGTTTCACCAAAAT+GGG + chr8_4:26806298-26806317 Msa1321330:intron 35.0%
! TGAGGAATATGTTCCCATTT+TGG - chr8_4:26806314-26806333 None:intergenic 35.0%
ATTGAAAAGACAGTTCTGTG+AGG - chr8_4:26806332-26806351 None:intergenic 35.0%
CAATTTGCACACCATCTAAT+TGG + chr8_4:26806348-26806367 Msa1321330:intron 35.0%
TTCACTAAAGGTAAGAGAAG+TGG + chr8_4:26806393-26806412 Msa1321330:intron 35.0%
TCTTCCTATTGGGAATCAAA+AGG + chr8_4:26806725-26806744 Msa1321330:CDS 35.0%
!! TGTACCTTTTGATTCCCAAT+AGG - chr8_4:26806732-26806751 None:intergenic 35.0%
! CAATTTTTGCCATAGTGAAG+AGG + chr8_4:26806852-26806871 Msa1321330:CDS 35.0%
!! CCCACCTATATTGATTTGTA+TGG - chr8_4:26806930-26806949 None:intergenic 35.0%
!!! ATGGGTGGGTTAATTTTGAT+AGG + chr8_4:26807078-26807097 Msa1321330:intron 35.0%
!!! TGGGTGGGTTAATTTTGATA+GGG + chr8_4:26807079-26807098 Msa1321330:intron 35.0%
GGAGTGAAAGACAAGTTATA+TGG + chr8_4:26807164-26807183 Msa1321330:intron 35.0%
GAGCAAAATTTATGTGGTTG+AGG + chr8_4:26807189-26807208 Msa1321330:intron 35.0%
TAACACTACTCATGCTTAGT+TGG + chr8_4:26807341-26807360 Msa1321330:intron 35.0%
! TGTTACCCACCTTTTATTGA+TGG + chr8_4:26807435-26807454 Msa1321330:intron 35.0%
! GTTACCCACCTTTTATTGAT+GGG + chr8_4:26807436-26807455 Msa1321330:intron 35.0%
GTTACCCATCAATAAAAGGT+GGG - chr8_4:26807443-26807462 None:intergenic 35.0%
TGTTACCCATCAATAAAAGG+TGG - chr8_4:26807444-26807463 None:intergenic 35.0%
TTCGATTATTGAATGAGCGT+TGG + chr8_4:26807522-26807541 Msa1321330:intron 35.0%
TGGATACCAACAACTTATTG+TGG + chr8_4:26807711-26807730 Msa1321330:intron 35.0%
GGATACCAACAACTTATTGT+GGG + chr8_4:26807712-26807731 Msa1321330:intron 35.0%
CTAAACCCACAATAAGTTGT+TGG - chr8_4:26807720-26807739 None:intergenic 35.0%
CACACATATTTCACCAAACA+AGG + chr8_4:26808022-26808041 Msa1321330:CDS 35.0%
ACATATTTCACCAAACAAGG+TGG + chr8_4:26808025-26808044 Msa1321330:CDS 35.0%
!! GAAATTTTGATCCTAGGGTA+TGG - chr8_4:26808060-26808079 None:intergenic 35.0%
CGTATATTGGAACAACGAAA+AGG - chr8_4:26808126-26808145 None:intergenic 35.0%
ATAACCGTGTTGCAAAGAAT+CGG + chr8_4:26808196-26808215 Msa1321330:CDS 35.0%
TACTACCGATGTATATTTGG+TGG + chr8_4:26808326-26808345 Msa1321330:CDS 35.0%
CTTCCTCAATATATGATCAC+CGG + chr8_4:26808352-26808371 Msa1321330:CDS 35.0%
! TTTTATGATCAAATGCCGGA+TGG + chr8_4:26808415-26808434 Msa1321330:CDS 35.0%
TACTATACTTATATACGCCG+CGG - chr8_4:26808458-26808477 None:intergenic 35.0%
GTTGGGAGATAACATCAATA+GGG + chr8_4:26808552-26808571 Msa1321330:CDS 35.0%
AGATGAAAGAAGTAACCAAG+AGG + chr8_4:26808678-26808697 Msa1321330:CDS 35.0%
GATGAAAGAAGTAACCAAGA+GGG + chr8_4:26808679-26808698 Msa1321330:CDS 35.0%
!! TTCTGGAGTGTAGTAAAACA+AGG + chr8_4:26808723-26808742 Msa1321330:exon 35.0%
AGTAGCATTATCTATGGCAA+AGG - chr8_4:26808760-26808779 None:intergenic 35.0%
!! AGGAGCACTACTAGAAATTG+GGG - chr8_4:26801717-26801736 None:intergenic 40.0%
!!! ATGTTTGGATTTTGGGGTGT+GGG - chr8_4:26801749-26801768 None:intergenic 40.0%
!!! TATGTTTGGATTTTGGGGTG+TGG - chr8_4:26801750-26801769 None:intergenic 40.0%
!! GGGAAATCATGATTTTGGAG+AGG - chr8_4:26801810-26801829 None:intergenic 40.0%
! GTTGGGGGAAATCATGATTT+TGG - chr8_4:26801815-26801834 None:intergenic 40.0%
CAAAACTCACCACCAAATCA+TGG + chr8_4:26801881-26801900 Msa1321330:exon 40.0%
!!! GAGTTACTTTTGCTCTTGCT+TGG - chr8_4:26801915-26801934 None:intergenic 40.0%
CATCACTCCACAACCAAAAA+GGG + chr8_4:26801942-26801961 Msa1321330:CDS 40.0%
GAGATTTGCATACCAAGGTT+TGG + chr8_4:26802178-26802197 Msa1321330:CDS 40.0%
TGAGATTTGATGCCAAACCT+TGG - chr8_4:26802193-26802212 None:intergenic 40.0%
! TTTTTCACTGCTGTGGTTGT+TGG - chr8_4:26802245-26802264 None:intergenic 40.0%
CAGTGAAAAACGTGAACACA+TGG + chr8_4:26802255-26802274 Msa1321330:CDS 40.0%
AAAAACGTGAACACATGGGT+TGG + chr8_4:26802260-26802279 Msa1321330:CDS 40.0%
!! CAAAGTGTTGCATCACAAAG+AGG - chr8_4:26802791-26802810 None:intergenic 40.0%
! GCATTGACATATGTGAAGTG+TGG + chr8_4:26803696-26803715 Msa1321330:intron 40.0%
TATGTGAAGTGTGGTTGACT+TGG + chr8_4:26803705-26803724 Msa1321330:intron 40.0%
!!! GGACATGTATTTTGAAACGG+AGG + chr8_4:26803726-26803745 Msa1321330:intron 40.0%
AATGCTAACGAATGTACCTC+CGG - chr8_4:26803956-26803975 None:intergenic 40.0%
TAACGTTTCTCACGTCACAT+AGG + chr8_4:26804697-26804716 Msa1321330:intron 40.0%
AACGTTTCTCACGTCACATA+GGG + chr8_4:26804698-26804717 Msa1321330:intron 40.0%
GCACTTTATGTGCTTTCCAT+TGG + chr8_4:26804779-26804798 Msa1321330:CDS 40.0%
TATGTGCTTTCCATTGGTGA+AGG + chr8_4:26804785-26804804 Msa1321330:CDS 40.0%
TCAGTGTATATGGTAGGGTT+TGG - chr8_4:26805228-26805247 None:intergenic 40.0%
CTTGTGTACAACTTGACCAA+AGG - chr8_4:26805447-26805466 None:intergenic 40.0%
!! AAAAGACTGGTTTGCAAGGT+TGG + chr8_4:26806129-26806148 Msa1321330:intron 40.0%
!! TGTTCCCATTTTGGTGAAAC+TGG - chr8_4:26806305-26806324 None:intergenic 40.0%
AAATTCAGGACAATGTTGGG+TGG + chr8_4:26806653-26806672 Msa1321330:intron 40.0%
AATTCAGGACAATGTTGGGT+GGG + chr8_4:26806654-26806673 Msa1321330:intron 40.0%
! GGGAATCAAAAGGTACAGAA+AGG + chr8_4:26806735-26806754 Msa1321330:CDS 40.0%
! TTGTAAATGGACTCCCTGTA+GGG - chr8_4:26806765-26806784 None:intergenic 40.0%
CATCTTTCTCCTCTTCACTA+TGG - chr8_4:26806864-26806883 None:intergenic 40.0%
TTGTCACTCATCCAACAACA+TGG - chr8_4:26807632-26807651 None:intergenic 40.0%
! TTTGTTATGGGCATGTAGGT+TGG + chr8_4:26807674-26807693 Msa1321330:intron 40.0%
TTGTTATGGGCATGTAGGTT+GGG + chr8_4:26807675-26807694 Msa1321330:intron 40.0%
GTCACTGAACATAATCTCCA+TGG - chr8_4:26807917-26807936 None:intergenic 40.0%
TTCTTCGTCTAATCCCTGTA+TGG + chr8_4:26807960-26807979 Msa1321330:CDS 40.0%
GATTAATGTGCCACCTTGTT+TGG - chr8_4:26808038-26808057 None:intergenic 40.0%
! CCACTTGCTAGAAAATTCAC+CGG + chr8_4:26808160-26808179 Msa1321330:CDS 40.0%
AACTCCGATTCTTTGCAACA+CGG - chr8_4:26808203-26808222 None:intergenic 40.0%
GGCTCTTGTAGAAACGAAAA+GGG + chr8_4:26808258-26808277 Msa1321330:CDS 40.0%
ATGCCGGTGATCATATATTG+AGG - chr8_4:26808358-26808377 None:intergenic 40.0%
TCTGATGCGTTTACTATCGT+TGG + chr8_4:26808379-26808398 Msa1321330:CDS 40.0%
GCGGCGTATATAAGTATAGT+AGG + chr8_4:26808457-26808476 Msa1321330:CDS 40.0%
AAAAGCTGGTGAGAAATGGT+TGG + chr8_4:26808534-26808553 Msa1321330:CDS 40.0%
AAAGCTGGTGAGAAATGGTT+GGG + chr8_4:26808535-26808554 Msa1321330:CDS 40.0%
GGTTGGGAGATAACATCAAT+AGG + chr8_4:26808551-26808570 Msa1321330:CDS 40.0%
GGCTACAATAGATATCGTTC+TGG + chr8_4:26808706-26808725 Msa1321330:CDS 40.0%
!!! TGTTTGGATTTTGGGGTGTG+GGG - chr8_4:26801748-26801767 None:intergenic 45.0%
TTGGGCTATCTGCCATGATT+TGG - chr8_4:26801896-26801915 None:intergenic 45.0%
!!! CCTTTTTGGTTGTGGAGTGA+TGG - chr8_4:26801944-26801963 None:intergenic 45.0%
CCATCACTCCACAACCAAAA+AGG + chr8_4:26801941-26801960 Msa1321330:CDS 45.0%
! AGCATTCCAACCACCCTTTT+TGG - chr8_4:26801958-26801977 None:intergenic 45.0%
!! AATGGGTGTTGGAGATTTGG+AGG - chr8_4:26802094-26802113 None:intergenic 45.0%
GCTGAGAGATTTGCATACCA+AGG + chr8_4:26802173-26802192 Msa1321330:CDS 45.0%
! GTTCACGTTTTTCACTGCTG+TGG - chr8_4:26802252-26802271 None:intergenic 45.0%
TCCTCACTATTCCCTTTGCT+TGG + chr8_4:26802287-26802306 Msa1321330:CDS 45.0%
ACCAAGCAAAGGGAATAGTG+AGG - chr8_4:26802291-26802310 None:intergenic 45.0%
TCACTATTCCCTTTGCTTGG+TGG + chr8_4:26802290-26802309 Msa1321330:CDS 45.0%
CTATGAAGCCACCAAGCAAA+GGG - chr8_4:26802301-26802320 None:intergenic 45.0%
! AGTTGGCTCCAAGGCATTAA+AGG - chr8_4:26804065-26804084 None:intergenic 45.0%
CTCTTAGCATCCTTCTCTTC+CGG - chr8_4:26804866-26804885 None:intergenic 45.0%
CACTTGTGAGATTGCTTAGG+AGG - chr8_4:26805822-26805841 None:intergenic 45.0%
ATTCAGGACAATGTTGGGTG+GGG + chr8_4:26806655-26806674 Msa1321330:intron 45.0%
TACAGAAAGGAAAGCCCTAC+AGG + chr8_4:26806748-26806767 Msa1321330:CDS 45.0%
ACAGAAAGGAAAGCCCTACA+GGG + chr8_4:26806749-26806768 Msa1321330:CDS 45.0%
! CTTGTAAATGGACTCCCTGT+AGG - chr8_4:26806766-26806785 None:intergenic 45.0%
AGGGAGTCCATTTACAAGAC+TGG + chr8_4:26806768-26806787 Msa1321330:CDS 45.0%
! ACTTGGGCCAGTCTTGTAAA+TGG - chr8_4:26806778-26806797 None:intergenic 45.0%
GGTCGAACATGAACATGATG+AGG - chr8_4:26806889-26806908 None:intergenic 45.0%
!! TACACTAGATGATGGATGGG+TGG + chr8_4:26807063-26807082 Msa1321330:intron 45.0%
!! ACACTAGATGATGGATGGGT+GGG + chr8_4:26807064-26807083 Msa1321330:intron 45.0%
! CAACAACATGGCTTGGATGT+TGG - chr8_4:26807620-26807639 None:intergenic 45.0%
CAACATCCAAGCCATGTTGT+TGG + chr8_4:26807618-26807637 Msa1321330:intron 45.0%
ACTCATCCAACAACATGGCT+TGG - chr8_4:26807627-26807646 None:intergenic 45.0%
GGCACATTAATCCATACCCT+AGG + chr8_4:26808046-26808065 Msa1321330:CDS 45.0%
! ACGAAGACTCGGTCGTATAT+TGG - chr8_4:26808139-26808158 None:intergenic 45.0%
!! CCGGTGAATTTTCTAGCAAG+TGG - chr8_4:26808163-26808182 None:intergenic 45.0%
AAATTCACCGGTCACCCAAA+TGG + chr8_4:26808172-26808191 Msa1321330:CDS 45.0%
AATTCACCGGTCACCCAAAT+GGG + chr8_4:26808173-26808192 Msa1321330:CDS 45.0%
GCAACACGGTTATCCCATTT+GGG - chr8_4:26808189-26808208 None:intergenic 45.0%
TGCAACACGGTTATCCCATT+TGG - chr8_4:26808190-26808209 None:intergenic 45.0%
GTGTTGCAAAGAATCGGAGT+TGG + chr8_4:26808202-26808221 Msa1321330:CDS 45.0%
CGGCTCTTGTAGAAACGAAA+AGG + chr8_4:26808257-26808276 Msa1321330:CDS 45.0%
AGTAAACGCATCAGAGATGC+CGG - chr8_4:26808374-26808393 None:intergenic 45.0%
GAGGCAATTAGTGCAAAAGC+TGG + chr8_4:26808520-26808539 Msa1321330:CDS 45.0%
GTGCAAAAGCTGGTGAGAAA+TGG + chr8_4:26808530-26808549 Msa1321330:CDS 45.0%
AGAAGTAACCAAGAGGGTTC+TGG + chr8_4:26808685-26808704 Msa1321330:CDS 45.0%
TATTGTAGCCAGAACCCTCT+TGG - chr8_4:26808696-26808715 None:intergenic 45.0%
!! TATAAATTGAAATTTAATAT+TGG - chr8_4:26802716-26802735 None:intergenic 5.0%
!!! ATTTAAAATAAAATAAAATG+AGG - chr8_4:26805940-26805959 None:intergenic 5.0%
! GGCTATCTGCCATGATTTGG+TGG - chr8_4:26801893-26801912 None:intergenic 50.0%
!! GGTTGTGGAGTGATGGATGA+GGG - chr8_4:26801937-26801956 None:intergenic 50.0%
!! TGGTTGTGGAGTGATGGATG+AGG - chr8_4:26801938-26801957 None:intergenic 50.0%
CACTCCACAACCAAAAAGGG+TGG + chr8_4:26801945-26801964 Msa1321330:CDS 50.0%
!!! CCAACCACCCTTTTTGGTTG+TGG - chr8_4:26801952-26801971 None:intergenic 50.0%
CCACAACCAAAAAGGGTGGT+TGG + chr8_4:26801949-26801968 Msa1321330:CDS 50.0%
GCTATGAAGCCACCAAGCAA+AGG - chr8_4:26802302-26802321 None:intergenic 50.0%
TGGTTCTTGATTCTGGCAGC+TGG + chr8_4:26802747-26802766 Msa1321330:intron 50.0%
TTCCTACTTCCCACACGTAG+GGG - chr8_4:26802846-26802865 None:intergenic 50.0%
GTTCCTACTTCCCACACGTA+GGG - chr8_4:26802847-26802866 None:intergenic 50.0%
GTGCTTTCCATTGGTGAAGG+AGG + chr8_4:26804788-26804807 Msa1321330:CDS 50.0%
CTTATGGCCTCCTTCACCAA+TGG - chr8_4:26804798-26804817 None:intergenic 50.0%
GCGGCGAAAGTTTGAACACA+AGG - chr8_4:26804821-26804840 None:intergenic 50.0%
! TTGGTGGTACTTGGGCATTG+TGG + chr8_4:26804898-26804917 Msa1321330:CDS 50.0%
!! GACTGGTTTGCAAGGTTGGT+AGG + chr8_4:26806133-26806152 Msa1321330:intron 50.0%
!! AGGAGTATTGGCAGGAGTGT+TGG + chr8_4:26806687-26806706 Msa1321330:CDS 50.0%
!! ATTGGCAGGAGTGTTGGCAT+TGG + chr8_4:26806693-26806712 Msa1321330:CDS 50.0%
! GCACTGGCACTCTTCCTATT+GGG + chr8_4:26806715-26806734 Msa1321330:CDS 50.0%
AGCTGCGGCGACAAAAACTT+GGG - chr8_4:26806794-26806813 None:intergenic 50.0%
! TGGGCATGTAGGTTGGGTTT+CGG + chr8_4:26807681-26807700 Msa1321330:intron 50.0%
! CATGTAGGTTGGGTTTCGGT+TGG + chr8_4:26807685-26807704 Msa1321330:intron 50.0%
TTCCCTCCAGCATCACTTCA+AGG + chr8_4:26808082-26808101 Msa1321330:CDS 50.0%
TAGCAAGTGGCACGAAGACT+CGG - chr8_4:26808150-26808169 None:intergenic 50.0%
GGTTATCCCATTTGGGTGAC+CGG - chr8_4:26808182-26808201 None:intergenic 50.0%
CCCAAACTTCTCAGTCCATC+CGG - chr8_4:26808433-26808452 None:intergenic 50.0%
!! CCGGATGGACTGAGAAGTTT+GGG + chr8_4:26808430-26808449 Msa1321330:CDS 50.0%
TGGGGTGTGGGGATGAGAAA+AGG - chr8_4:26801737-26801756 None:intergenic 55.0%
GGTTCCTACTTCCCACACGT+AGG - chr8_4:26802848-26802867 None:intergenic 55.0%
CGTGTCGTCGTCGAACTGAT+CGG - chr8_4:26804843-26804862 None:intergenic 55.0%
! TGGTACTTGGGCATTGTGGC+TGG + chr8_4:26804902-26804921 Msa1321330:CDS 55.0%
GACAATGTTGGGTGGGGTGT+GGG + chr8_4:26806661-26806680 Msa1321330:CDS 55.0%
ACAATGTTGGGTGGGGTGTG+GGG + chr8_4:26806662-26806681 Msa1321330:CDS 55.0%
! GGGTGTGGGGTTAGGAGTAT+TGG + chr8_4:26806675-26806694 Msa1321330:CDS 55.0%
!! GTGGGGTTAGGAGTATTGGC+AGG + chr8_4:26806679-26806698 Msa1321330:CDS 55.0%
!! AGGAGTGTTGGCATTGGCAC+TGG + chr8_4:26806699-26806718 Msa1321330:CDS 55.0%
!! GGCACTGGCACTCTTCCTAT+TGG + chr8_4:26806714-26806733 Msa1321330:CDS 55.0%
GAGCTGCGGCGACAAAAACT+TGG - chr8_4:26806795-26806814 None:intergenic 55.0%
GGTTGGGTTTCGGTTGGAGT+TGG + chr8_4:26807691-26807710 Msa1321330:intron 55.0%
GGCCTTGAAGTGATGCTGGA+GGG - chr8_4:26808087-26808106 None:intergenic 55.0%
AGGCCTTGAAGTGATGCTGG+AGG - chr8_4:26808088-26808107 None:intergenic 55.0%
ACGAGGCCTTGAAGTGATGC+TGG - chr8_4:26808091-26808110 None:intergenic 55.0%
GCATCACTTCAAGGCCTCGT+CGG + chr8_4:26808091-26808110 Msa1321330:CDS 55.0%
AAAGGATCGTGACTCCGACG+AGG - chr8_4:26808108-26808127 None:intergenic 55.0%
!! GCCGGATGGACTGAGAAGTT+TGG + chr8_4:26808429-26808448 Msa1321330:CDS 55.0%
ACTGAGAAGTTTGGGAGCCG+CGG + chr8_4:26808438-26808457 Msa1321330:CDS 55.0%
ATGAATGGGGCCCCTACGTG+TGG + chr8_4:26802833-26802852 Msa1321330:intron 60.0%
TGAATGGGGCCCCTACGTGT+GGG + chr8_4:26802834-26802853 Msa1321330:intron 60.0%
GTCGTCGTCGAACTGATCGG+CGG - chr8_4:26804840-26804859 None:intergenic 60.0%
TCAGTTCGACGACGACACGC+CGG + chr8_4:26804844-26804863 Msa1321330:CDS 60.0%
GGACAATGTTGGGTGGGGTG+TGG + chr8_4:26806660-26806679 Msa1321330:intron 60.0%
GGCCCCTACGTGTGGGAAGT+AGG + chr8_4:26802841-26802860 Msa1321330:intron 65.0%
CGACGACACGCCGGAAGAGA+AGG + chr8_4:26804853-26804872 Msa1321330:CDS 65.0%
GTTGGGTGGGGTGTGGGGTT+AGG + chr8_4:26806667-26806686 Msa1321330:CDS 65.0%
TTGTCGCCGCAGCTCGCAAG+TGG + chr8_4:26806800-26806819 Msa1321330:CDS 65.0%
CACGCGCCACTTGCGAGCTG+CGG - chr8_4:26806809-26806828 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 26801641 26808914 26801641 ID=Msa1321330;Name=Msa1321330
chr8_4 mRNA 26801641 26808914 26801641 ID=Msa1321330-mRNA-1;Parent=Msa1321330;Name=Msa1321330-mRNA-1;_AED=0.07;_eAED=0.07;_QI=259|1|1|1|1|1|5|179|572
chr8_4 exon 26801641 26801993 26801641 ID=Msa1321330-mRNA-1:exon:9153;Parent=Msa1321330-mRNA-1
chr8_4 exon 26802162 26802379 26802162 ID=Msa1321330-mRNA-1:exon:9154;Parent=Msa1321330-mRNA-1
chr8_4 exon 26804719 26804961 26804719 ID=Msa1321330-mRNA-1:exon:9155;Parent=Msa1321330-mRNA-1
chr8_4 exon 26806661 26806944 26806661 ID=Msa1321330-mRNA-1:exon:9156;Parent=Msa1321330-mRNA-1
chr8_4 exon 26807856 26808914 26807856 ID=Msa1321330-mRNA-1:exon:9157;Parent=Msa1321330-mRNA-1
chr8_4 five_prime_UTR 26801641 26801899 26801641 ID=Msa1321330-mRNA-1:five_prime_utr;Parent=Msa1321330-mRNA-1
chr8_4 CDS 26801900 26801993 26801900 ID=Msa1321330-mRNA-1:cds;Parent=Msa1321330-mRNA-1
chr8_4 CDS 26802162 26802379 26802162 ID=Msa1321330-mRNA-1:cds;Parent=Msa1321330-mRNA-1
chr8_4 CDS 26804719 26804961 26804719 ID=Msa1321330-mRNA-1:cds;Parent=Msa1321330-mRNA-1
chr8_4 CDS 26806661 26806944 26806661 ID=Msa1321330-mRNA-1:cds;Parent=Msa1321330-mRNA-1
chr8_4 CDS 26807856 26808735 26807856 ID=Msa1321330-mRNA-1:cds;Parent=Msa1321330-mRNA-1
chr8_4 three_prime_UTR 26808736 26808914 26808736 ID=Msa1321330-mRNA-1:three_prime_utr;Parent=Msa1321330-mRNA-1
Gene Sequence

>Msa1321330

ATGGCAGATAGCCCAAGCAAGAGCAAAAGTAACTCCCTCATCCATCACTCCACAACCAAAAAGGGTGGTTGGAATGCTGCCATCTTCATCATATTTGTGGAATTTGCTGAGAGATTTGCATACCAAGGTTTGGCATCAAATCTCATAAACTACCTCACAAAATTTCTGAATGAACCAACAACCACAGCAGTGAAAAACGTGAACACATGGGTTGGTGTCTCCTCACTATTCCCTTTGCTTGGTGGCTTCATAGCTGATTCATATCTTGGTCGATTCAACACCATACTCTTGTCTTCACTCATTTATCTTGTGGGCATGATTTTCTTGACACTTTCAGTGTCGGCACTTAGACACAAGACACTTTTCTTCTTTGCACTTTATGTGCTTTCCATTGGTGAAGGAGGCCATAAGCCTTGTGTTCAAACTTTCGCCGCCGATCAGTTCGACGACGACACGCCGGAAGAGAAGGATGCTAAGAGTTCATTTTTCAATTGGTGGTACTTGGGCATTGTGGCTGGTTCAACTGCTGCTGTGTTTATACCAGTATATCTTCAGGACAATGTTGGGTGGGGTGTGGGGTTAGGAGTATTGGCAGGAGTGTTGGCATTGGCACTGGCACTCTTCCTATTGGGAATCAAAAGGTACAGAAAGGAAAGCCCTACAGGGAGTCCATTTACAAGACTGGCCCAAGTTTTTGTCGCCGCAGCTCGCAAGTGGCGCGTGCAAGACACTCTCCTTCATAGTAACAATTTTTGCCATAGTGAAGAGGAGAAAGATGAGCCTCATCATGTTCATGTTCGACCTAAATATCATACTTTGCTCCATACAAATCAATATAGATTTTTGGACAAAGCAGCAATAATTGATGAAGTTGATTCCTCAAACAAAACAAGAAATCCATGGAGATTATGTTCAGTGACTCAAGTTGAAGAAGTGAAACTAGTTCTTCGTCTAATCCCTGTATGGCTAACTTGTTTAATGTTCACTGTTGTTCAAGCTCAAGTACACACATATTTCACCAAACAAGGTGGCACATTAATCCATACCCTAGGATCAAAATTTCAATTCCCTCCAGCATCACTTCAAGGCCTCGTCGGAGTCACGATCCTTTTCGTTGTTCCAATATACGACCGAGTCTTCGTGCCACTTGCTAGAAAATTCACCGGTCACCCAAATGGGATAACCGTGTTGCAAAGAATCGGAGTTGGTTTATTTTTATCTATACTCACAATGGTTGTTTCGGCTCTTGTAGAAACGAAAAGGGTTAATGTTGCTAAAAGTCACGGTCTAATAGACGATCAAAGTGCAATACTACCGATGTATATTTGGTGGTTACTTCCTCAATATATGATCACCGGCATCTCTGATGCGTTTACTATCGTTGGATTACAAGAAATTTTTTATGATCAAATGCCGGATGGACTGAGAAGTTTGGGAGCCGCGGCGTATATAAGTATAGTAGGAGTTGGAAGCTTTGTTAGTAACATTATAATTGAAGTTGTTGAGGCAATTAGTGCAAAAGCTGGTGAGAAATGGTTGGGAGATAACATCAATAGGGCACACCTTGATGATTATTATTGGGTTATGGCTGTGTTAAGTGCTGTTAATTTGGGTGTTTATATGTGGATTGCAAAGTGTTTTGAGTATAAAAAGGTAGATGGAGATGAAAGAAGTAACCAAGAGGGTTCTGGCTACAATAGATATCGTTCTGGAGTGTAG
Protein sequence

>Msa1321330

MADSPSKSKSNSLIHHSTTKKGGWNAAIFIIFVEFAERFAYQGLASNLINYLTKFLNEPTTTAVKNVNTWVGVSSLFPLLGGFIADSYLGRFNTILLSSLIYLVGMIFLTLSVSALRHKTLFFFALYVLSIGEGGHKPCVQTFAADQFDDDTPEEKDAKSSFFNWWYLGIVAGSTAAVFIPVYLQDNVGWGVGLGVLAGVLALALALFLLGIKRYRKESPTGSPFTRLAQVFVAAARKWRVQDTLLHSNNFCHSEEEKDEPHHVHVRPKYHTLLHTNQYRFLDKAAIIDEVDSSNKTRNPWRLCSVTQVEEVKLVLRLIPVWLTCLMFTVVQAQVHTYFTKQGGTLIHTLGSKFQFPPASLQGLVGVTILFVVPIYDRVFVPLARKFTGHPNGITVLQRIGVGLFLSILTMVVSALVETKRVNVAKSHGLIDDQSAILPMYIWWLLPQYMITGISDAFTIVGLQEIFYDQMPDGLRSLGAAAYISIVGVGSFVSNIIIEVVEAISAKAGEKWLGDNINRAHLDDYYWVMAVLSAVNLGVYMWIAKCFEYKKVDGDERSNQEGSGYNRYRSGV*