Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1190660 | TKY45627.1 | 97.647 | 85 | 2 | 0 | 175 | 259 | 15 | 99 | 1.38e-50 | 171 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0902770 | Msa1190660 | 0.805728 | 1.160492e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1190660 | MtrunA17_Chr8g0355441 | 44.755 | 143 | 76 | 2 | 12 | 154 | 27 | 166 | 1.74e-32 | 122 |
| Msa1190660 | MtrunA17_Chr8g0355451 | 46.154 | 117 | 62 | 1 | 38 | 154 | 1 | 116 | 5.92e-29 | 109 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 51 sgRNAs with CRISPR-Local
Find 354 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATATTTCAAATGAGCGATTT+TGG | 0.191025 | 8_1:-33805246 | None:intergenic |
| TTCATAAATGTCACAGAAAC+TGG | 0.276433 | 8_1:-33804970 | None:intergenic |
| AGAGAGGTAGCGTATGTTAT+TGG | 0.292436 | 8_1:+33805047 | Msa1190660:CDS |
| CACTGAACCTTATCATTTAG+AGG | 0.311158 | 8_1:+33806751 | Msa1190660:CDS |
| AAGCTTGCACATAGCTTAAC+AGG | 0.318970 | 8_1:-33804825 | None:intergenic |
| ACTGACGAAAGGGGTAAATA+TGG | 0.332264 | 8_1:+33805221 | Msa1190660:CDS |
| AATCGCTCATTTGAAATATA+AGG | 0.354971 | 8_1:+33805250 | Msa1190660:CDS |
| GCTGATGACTCGCGCTTACT+AGG | 0.371143 | 8_1:-33806603 | None:intergenic |
| CGGCGACGTGGGCGGTTCGC+TGG | 0.382116 | 8_1:+33806708 | Msa1190660:CDS |
| GCTGAGGTCTCGTTCGTTAA+CGG | 0.392502 | 8_1:-33806336 | None:intergenic |
| GGTTTCCTAGAAATAGAAAA+TGG | 0.414422 | 8_1:+33804921 | Msa1190660:CDS |
| AAGGTCAAAATCACTCGTTT+AGG | 0.424743 | 8_1:+33805269 | Msa1190660:CDS |
| GGATAGATCATTGCAATTGT+TGG | 0.426288 | 8_1:+33806564 | Msa1190660:intron |
| GATTGCTAAACTACTAGTTC+CGG | 0.431031 | 8_1:-33805081 | None:intergenic |
| TCTCCTTCCTCTAAATGATA+AGG | 0.431905 | 8_1:-33806758 | None:intergenic |
| CCTACTATCAAGGCAAAAGA+TGG | 0.445153 | 8_1:+33806291 | Msa1190660:intron |
| TTTCTGTGACATTTATGAAC+CGG | 0.452720 | 8_1:+33804974 | Msa1190660:CDS |
| TTCAAGTCAAAGATAAATTG+AGG | 0.453535 | 8_1:-33805122 | None:intergenic |
| AATGGACATAACTGACGAAA+GGG | 0.462070 | 8_1:+33805211 | Msa1190660:CDS |
| GAATGGTCCGGTGAAGTGTT+CGG | 0.463833 | 8_1:+33806681 | Msa1190660:CDS |
| AGTTTAGCAATCTCTCATAA+AGG | 0.471854 | 8_1:+33805092 | Msa1190660:CDS |
| AAGATGGGACACCTGCTGTC+TGG | 0.491038 | 8_1:+33806307 | Msa1190660:CDS |
| CGTCGCTCCTACCGATTGAA+TGG | 0.492411 | 8_1:+33806664 | Msa1190660:CDS |
| TGTTCGGATTGCGGCGACGT+GGG | 0.497493 | 8_1:+33806697 | Msa1190660:CDS |
| GGGCGGTGTGTACAAAGGGC+AGG | 0.504637 | 8_1:-33806642 | None:intergenic |
| ATTCAATCGGTAGGAGCGAC+GGG | 0.524836 | 8_1:-33806662 | None:intergenic |
| GGTAGCGTATGTTATTGGTA+TGG | 0.539102 | 8_1:+33805052 | Msa1190660:CDS |
| CTCCTACCGATTGAATGGTC+CGG | 0.539660 | 8_1:+33806669 | Msa1190660:CDS |
| CCTCCACATAGCTATTTAGC+AGG | 0.541023 | 8_1:-33806358 | None:intergenic |
| GTTATTGGTATGGAAAATAC+CGG | 0.541068 | 8_1:+33805062 | Msa1190660:CDS |
| CATTCAATCGGTAGGAGCGA+CGG | 0.544887 | 8_1:-33806663 | None:intergenic |
| GCGACGGGCGGTGTGTACAA+AGG | 0.546864 | 8_1:-33806647 | None:intergenic |
| CCGCAATCCGAACACTTCAC+CGG | 0.552003 | 8_1:-33806688 | None:intergenic |
| GTGTTCGGATTGCGGCGACG+TGG | 0.564158 | 8_1:+33806696 | Msa1190660:CDS |
| CATAGCTATTTAGCAGGCTG+AGG | 0.570202 | 8_1:-33806352 | None:intergenic |
| ACTTCACCGGACCATTCAAT+CGG | 0.572754 | 8_1:-33806675 | None:intergenic |
| AACGGAATTAACCAGACAGC+AGG | 0.587701 | 8_1:-33806318 | None:intergenic |
| TCGGATTGCGGCGACGTGGG+CGG | 0.588831 | 8_1:+33806700 | Msa1190660:CDS |
| AAATGGACATAACTGACGAA+AGG | 0.591092 | 8_1:+33805210 | Msa1190660:CDS |
| CTCTAAATGATAAGGTTCAG+TGG | 0.599053 | 8_1:-33806750 | None:intergenic |
| CTACTATCAAGGCAAAAGAT+GGG | 0.600011 | 8_1:+33806292 | Msa1190660:intron |
| TTCAATGGCAATGTCAACAA+AGG | 0.600060 | 8_1:+33804519 | None:intergenic |
| CCGGTGAAGTGTTCGGATTG+CGG | 0.622249 | 8_1:+33806688 | Msa1190660:CDS |
| GGCGGTGTGTACAAAGGGCA+GGG | 0.622370 | 8_1:-33806641 | None:intergenic |
| CAGCCTGCTAAATAGCTATG+TGG | 0.642696 | 8_1:+33806355 | Msa1190660:CDS |
| GCAATTGTTGGTCTTCAACG+AGG | 0.654640 | 8_1:+33806576 | Msa1190660:CDS |
| CACCGGACCATTCAATCGGT+AGG | 0.660438 | 8_1:-33806671 | None:intergenic |
| ATGGACATAACTGACGAAAG+GGG | 0.670055 | 8_1:+33805212 | Msa1190660:CDS |
| CCTGCTAAATAGCTATGTGG+AGG | 0.670649 | 8_1:+33806358 | Msa1190660:CDS |
| CAATCGGTAGGAGCGACGGG+CGG | 0.692481 | 8_1:-33806659 | None:intergenic |
| GTGGACTTCTCACAACGTCG+CGG | 0.737221 | 8_1:-33806731 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTGTTAATTTTTTTTGT+AGG | + | chr8_1:33804785-33804804 | Msa1190660:intron | 10.0% |
| !!! | TAAAACTATTTTAGAAAAAA+TGG | + | chr8_1:33805193-33805212 | Msa1190660:CDS | 10.0% |
| !! | TATATATATGTATGTAAATA+TGG | + | chr8_1:33805361-33805380 | Msa1190660:intron | 10.0% |
| !!! | TAATATATGATTTTTATAGT+TGG | + | chr8_1:33805560-33805579 | Msa1190660:intron | 10.0% |
| !!! | ATTTTGTTAATTTTTTTTGT+AGG | + | chr8_1:33804785-33804804 | Msa1190660:intron | 10.0% |
| !!! | TAAAACTATTTTAGAAAAAA+TGG | + | chr8_1:33805193-33805212 | Msa1190660:CDS | 10.0% |
| !! | TATATATATGTATGTAAATA+TGG | + | chr8_1:33805361-33805380 | Msa1190660:intron | 10.0% |
| !!! | TAATATATGATTTTTATAGT+TGG | + | chr8_1:33805560-33805579 | Msa1190660:intron | 10.0% |
| !! | AAAATTAACAAAATAAACTG+CGG | - | chr8_1:33804779-33804798 | None:intergenic | 15.0% |
| !!! | GTTTTTAATTTTTTTGATTC+TGG | - | chr8_1:33805164-33805183 | None:intergenic | 15.0% |
| !!! | ATTTCTTAATTGTATTTTGA+AGG | + | chr8_1:33805652-33805671 | Msa1190660:intron | 15.0% |
| !!! | TTTCTTAATTGTATTTTGAA+GGG | + | chr8_1:33805653-33805672 | Msa1190660:intron | 15.0% |
| !! | AAAATTAACAAAATAAACTG+CGG | - | chr8_1:33804779-33804798 | None:intergenic | 15.0% |
| !!! | GTTTTTAATTTTTTTGATTC+TGG | - | chr8_1:33805164-33805183 | None:intergenic | 15.0% |
| !!! | ATTTCTTAATTGTATTTTGA+AGG | + | chr8_1:33805652-33805671 | Msa1190660:intron | 15.0% |
| !!! | TTTCTTAATTGTATTTTGAA+GGG | + | chr8_1:33805653-33805672 | Msa1190660:intron | 15.0% |
| !! | TTAGTATTTATGTATGTTGT+TGG | + | chr8_1:33804701-33804720 | Msa1190660:intron | 20.0% |
| !!! | TTATGTTTAATTTTGAGAGT+CGG | + | chr8_1:33804727-33804746 | Msa1190660:intron | 20.0% |
| !!! | GGTAAAATAATACTTTTTGT+CGG | + | chr8_1:33805581-33805600 | Msa1190660:intron | 20.0% |
| !! | TAAGAAATATACATGACTAA+CGG | - | chr8_1:33805640-33805659 | None:intergenic | 20.0% |
| !! | TGTGAATAAATTTCCAATTT+AGG | + | chr8_1:33805792-33805811 | Msa1190660:intron | 20.0% |
| !! | AATAAATTTCCAATTTAGGT+GGG | + | chr8_1:33805796-33805815 | Msa1190660:intron | 20.0% |
| !! | AGCAATATAACATAATTGTT+AGG | + | chr8_1:33805881-33805900 | Msa1190660:intron | 20.0% |
| !!! | AATTGTAGTTTTCATACTTA+GGG | - | chr8_1:33805957-33805976 | None:intergenic | 20.0% |
| !!! | AAATTGTAGTTTTCATACTT+AGG | - | chr8_1:33805958-33805977 | None:intergenic | 20.0% |
| !!! | AAGTATGAAAACTACAATTT+TGG | + | chr8_1:33805958-33805977 | Msa1190660:intron | 20.0% |
| !!! | ACAACATTTTGAAAAGATAA+GGG | - | chr8_1:33806048-33806067 | None:intergenic | 20.0% |
| !!! | TTTTCAAAATGTTGTGATTA+TGG | + | chr8_1:33806053-33806072 | Msa1190660:intron | 20.0% |
| !! | ACAAAGTGATTATAACAATT+AGG | - | chr8_1:33806200-33806219 | None:intergenic | 20.0% |
| !!! | TAATCACTTTGTAGAATTTT+TGG | + | chr8_1:33806208-33806227 | Msa1190660:intron | 20.0% |
| !!! | AATCACTTTGTAGAATTTTT+GGG | + | chr8_1:33806209-33806228 | Msa1190660:intron | 20.0% |
| !! | TTAGTATTTATGTATGTTGT+TGG | + | chr8_1:33804701-33804720 | Msa1190660:intron | 20.0% |
| !!! | TTATGTTTAATTTTGAGAGT+CGG | + | chr8_1:33804727-33804746 | Msa1190660:intron | 20.0% |
| !!! | GGTAAAATAATACTTTTTGT+CGG | + | chr8_1:33805581-33805600 | Msa1190660:intron | 20.0% |
| !! | TAAGAAATATACATGACTAA+CGG | - | chr8_1:33805640-33805659 | None:intergenic | 20.0% |
| !! | TGTGAATAAATTTCCAATTT+AGG | + | chr8_1:33805792-33805811 | Msa1190660:intron | 20.0% |
| !! | AATAAATTTCCAATTTAGGT+GGG | + | chr8_1:33805796-33805815 | Msa1190660:intron | 20.0% |
| !! | AGCAATATAACATAATTGTT+AGG | + | chr8_1:33805881-33805900 | Msa1190660:intron | 20.0% |
| !!! | AATTGTAGTTTTCATACTTA+GGG | - | chr8_1:33805957-33805976 | None:intergenic | 20.0% |
| !!! | AAATTGTAGTTTTCATACTT+AGG | - | chr8_1:33805958-33805977 | None:intergenic | 20.0% |
| !!! | AAGTATGAAAACTACAATTT+TGG | + | chr8_1:33805958-33805977 | Msa1190660:intron | 20.0% |
| !!! | ACAACATTTTGAAAAGATAA+GGG | - | chr8_1:33806048-33806067 | None:intergenic | 20.0% |
| !!! | TTTTCAAAATGTTGTGATTA+TGG | + | chr8_1:33806053-33806072 | Msa1190660:intron | 20.0% |
| !! | ACAAAGTGATTATAACAATT+AGG | - | chr8_1:33806200-33806219 | None:intergenic | 20.0% |
| !!! | TAATCACTTTGTAGAATTTT+TGG | + | chr8_1:33806208-33806227 | Msa1190660:intron | 20.0% |
| !!! | AATCACTTTGTAGAATTTTT+GGG | + | chr8_1:33806209-33806228 | Msa1190660:intron | 20.0% |
| ! | AAAAGCTATGATGTTAATAG+CGG | + | chr8_1:33804566-33804585 | Msa1190660:intron | 25.0% |
| ! | TAACTTAACTCCTGAAAAAA+AGG | + | chr8_1:33804872-33804891 | Msa1190660:CDS | 25.0% |
| ! | TTCAAGTCAAAGATAAATTG+AGG | - | chr8_1:33805125-33805144 | None:intergenic | 25.0% |
| !! | ATATTTCAAATGAGCGATTT+TGG | - | chr8_1:33805249-33805268 | None:intergenic | 25.0% |
| !! | AATCGCTCATTTGAAATATA+AGG | + | chr8_1:33805250-33805269 | Msa1190660:CDS | 25.0% |
| !! | ATATTTCAAATGAGCGATTT+TGG | - | chr8_1:33805249-33805268 | None:intergenic | 25.0% |
| ! | TGAGAATGTAAAGATTTCTT+AGG | + | chr8_1:33805703-33805722 | Msa1190660:intron | 25.0% |
| ! | GAATAAATTTCCAATTTAGG+TGG | + | chr8_1:33805795-33805814 | Msa1190660:intron | 25.0% |
| !! | ATTGTAGTTTTCATACTTAG+GGG | - | chr8_1:33805956-33805975 | None:intergenic | 25.0% |
| !!! | CAACATTTTGAAAAGATAAG+GGG | - | chr8_1:33806047-33806066 | None:intergenic | 25.0% |
| !!! | CACAACATTTTGAAAAGATA+AGG | - | chr8_1:33806049-33806068 | None:intergenic | 25.0% |
| ! | AGTTAATATTCCTACTATCA+AGG | + | chr8_1:33806281-33806300 | Msa1190660:intron | 25.0% |
| ! | ATGAAATTTCAAAGATTACC+CGG | - | chr8_1:33806536-33806555 | None:intergenic | 25.0% |
| ! | AAAAGCTATGATGTTAATAG+CGG | + | chr8_1:33804566-33804585 | Msa1190660:intron | 25.0% |
| ! | TAACTTAACTCCTGAAAAAA+AGG | + | chr8_1:33804872-33804891 | Msa1190660:CDS | 25.0% |
| ! | TTCAAGTCAAAGATAAATTG+AGG | - | chr8_1:33805125-33805144 | None:intergenic | 25.0% |
| !! | ATATTTCAAATGAGCGATTT+TGG | - | chr8_1:33805249-33805268 | None:intergenic | 25.0% |
| !! | AATCGCTCATTTGAAATATA+AGG | + | chr8_1:33805250-33805269 | Msa1190660:CDS | 25.0% |
| !! | ATATTTCAAATGAGCGATTT+TGG | - | chr8_1:33805249-33805268 | None:intergenic | 25.0% |
| ! | TGAGAATGTAAAGATTTCTT+AGG | + | chr8_1:33805703-33805722 | Msa1190660:intron | 25.0% |
| ! | GAATAAATTTCCAATTTAGG+TGG | + | chr8_1:33805795-33805814 | Msa1190660:intron | 25.0% |
| !! | ATTGTAGTTTTCATACTTAG+GGG | - | chr8_1:33805956-33805975 | None:intergenic | 25.0% |
| !!! | CAACATTTTGAAAAGATAAG+GGG | - | chr8_1:33806047-33806066 | None:intergenic | 25.0% |
| !!! | CACAACATTTTGAAAAGATA+AGG | - | chr8_1:33806049-33806068 | None:intergenic | 25.0% |
| ! | AGTTAATATTCCTACTATCA+AGG | + | chr8_1:33806281-33806300 | Msa1190660:intron | 25.0% |
| ! | ATGAAATTTCAAAGATTACC+CGG | - | chr8_1:33806536-33806555 | None:intergenic | 25.0% |
| ATAAATACTAAACACACAGC+GGG | - | chr8_1:33804692-33804711 | None:intergenic | 30.0% | |
| CATAAATACTAAACACACAG+CGG | - | chr8_1:33804693-33804712 | None:intergenic | 30.0% | |
| GGTTTCCTAGAAATAGAAAA+TGG | + | chr8_1:33804921-33804940 | Msa1190660:CDS | 30.0% | |
| !! | CTCTACCATTTTCTATTTCT+AGG | - | chr8_1:33804929-33804948 | None:intergenic | 30.0% |
| TTCATAAATGTCACAGAAAC+TGG | - | chr8_1:33804973-33804992 | None:intergenic | 30.0% | |
| TTTCTGTGACATTTATGAAC+CGG | + | chr8_1:33804974-33804993 | Msa1190660:CDS | 30.0% | |
| CTCTCTAACACAAAAAGAAA+AGG | - | chr8_1:33805033-33805052 | None:intergenic | 30.0% | |
| ! | CTTTTCTTTTTGTGTTAGAG+AGG | + | chr8_1:33805031-33805050 | Msa1190660:CDS | 30.0% |
| GTTATTGGTATGGAAAATAC+CGG | + | chr8_1:33805062-33805081 | Msa1190660:CDS | 30.0% | |
| AGTTTAGCAATCTCTCATAA+AGG | + | chr8_1:33805092-33805111 | Msa1190660:CDS | 30.0% | |
| ! | AATCGCTCATTTGAAATATG+AGG | + | chr8_1:33805390-33805409 | Msa1190660:intron | 30.0% |
| CTTAGGATTATTACTTCAAG+AGG | + | chr8_1:33805720-33805739 | Msa1190660:intron | 30.0% | |
| !! | TCGCAACTTTTTGAAAGATA+GGG | - | chr8_1:33806155-33806174 | None:intergenic | 30.0% |
| !! | ATCGCAACTTTTTGAAAGAT+AGG | - | chr8_1:33806154-33806173 | None:intergenic | 30.0% |
| ! | CTTTCAAAAAGTTGCGATTT+TGG | + | chr8_1:33805929-33805948 | Msa1190660:intron | 30.0% |
| ! | TTGTAGTTTTCATACTTAGG+GGG | - | chr8_1:33805955-33805974 | None:intergenic | 30.0% |
| ! | AGCATATTTTCCTAAACATG+GGG | - | chr8_1:33805986-33806005 | None:intergenic | 30.0% |
| ! | GAGCATATTTTCCTAAACAT+GGG | - | chr8_1:33805987-33806006 | None:intergenic | 30.0% |
| ! | AGAGCATATTTTCCTAAACA+TGG | - | chr8_1:33805988-33806007 | None:intergenic | 30.0% |
| ACATATTTCCCTTAAGTTAG+GGG | - | chr8_1:33806017-33806036 | None:intergenic | 30.0% | |
| GACATATTTCCCTTAAGTTA+GGG | - | chr8_1:33806018-33806037 | None:intergenic | 30.0% | |
| AGACATATTTCCCTTAAGTT+AGG | - | chr8_1:33806019-33806038 | None:intergenic | 30.0% | |
| !!! | TTCAAAATGGCCCTTTTTTT+TGG | + | chr8_1:33806087-33806106 | Msa1190660:intron | 30.0% |
| ! | CTTTCAAAAAGTTGCGATTT+TGG | - | chr8_1:33805929-33805948 | None:intergenic | 30.0% |
| !! | TCGCAACTTTTTGAAAGATA+AGG | + | chr8_1:33806155-33806174 | Msa1190660:intron | 30.0% |
| !! | CGCAACTTTTTGAAAGATAA+GGG | + | chr8_1:33806156-33806175 | Msa1190660:intron | 30.0% |
| !! | GCAACTTTTTGAAAGATAAG+GGG | + | chr8_1:33806157-33806176 | Msa1190660:intron | 30.0% |
| TGAAATTTCAAAGATTACCC+GGG | - | chr8_1:33806535-33806554 | None:intergenic | 30.0% | |
| !! | TCTTTGAAATTTCATCGTGA+TGG | + | chr8_1:33806541-33806560 | Msa1190660:intron | 30.0% |
| !! | CTTTGAAATTTCATCGTGAT+GGG | + | chr8_1:33806542-33806561 | Msa1190660:intron | 30.0% |
| ! | TTTGAAATTTCATCGTGATG+GGG | + | chr8_1:33806543-33806562 | Msa1190660:intron | 30.0% |
| ATAAATACTAAACACACAGC+GGG | - | chr8_1:33804692-33804711 | None:intergenic | 30.0% | |
| CATAAATACTAAACACACAG+CGG | - | chr8_1:33804693-33804712 | None:intergenic | 30.0% | |
| GGTTTCCTAGAAATAGAAAA+TGG | + | chr8_1:33804921-33804940 | Msa1190660:CDS | 30.0% | |
| !! | CTCTACCATTTTCTATTTCT+AGG | - | chr8_1:33804929-33804948 | None:intergenic | 30.0% |
| TTCATAAATGTCACAGAAAC+TGG | - | chr8_1:33804973-33804992 | None:intergenic | 30.0% | |
| TTTCTGTGACATTTATGAAC+CGG | + | chr8_1:33804974-33804993 | Msa1190660:CDS | 30.0% | |
| CTCTCTAACACAAAAAGAAA+AGG | - | chr8_1:33805033-33805052 | None:intergenic | 30.0% | |
| ! | CTTTTCTTTTTGTGTTAGAG+AGG | + | chr8_1:33805031-33805050 | Msa1190660:CDS | 30.0% |
| GTTATTGGTATGGAAAATAC+CGG | + | chr8_1:33805062-33805081 | Msa1190660:CDS | 30.0% | |
| AGTTTAGCAATCTCTCATAA+AGG | + | chr8_1:33805092-33805111 | Msa1190660:CDS | 30.0% | |
| ! | AATCGCTCATTTGAAATATG+AGG | + | chr8_1:33805390-33805409 | Msa1190660:intron | 30.0% |
| CTTAGGATTATTACTTCAAG+AGG | + | chr8_1:33805720-33805739 | Msa1190660:intron | 30.0% | |
| !! | TCGCAACTTTTTGAAAGATA+GGG | - | chr8_1:33806155-33806174 | None:intergenic | 30.0% |
| !! | ATCGCAACTTTTTGAAAGAT+AGG | - | chr8_1:33806154-33806173 | None:intergenic | 30.0% |
| ! | CTTTCAAAAAGTTGCGATTT+TGG | + | chr8_1:33805929-33805948 | Msa1190660:intron | 30.0% |
| ! | TTGTAGTTTTCATACTTAGG+GGG | - | chr8_1:33805955-33805974 | None:intergenic | 30.0% |
| ! | AGCATATTTTCCTAAACATG+GGG | - | chr8_1:33805986-33806005 | None:intergenic | 30.0% |
| ! | GAGCATATTTTCCTAAACAT+GGG | - | chr8_1:33805987-33806006 | None:intergenic | 30.0% |
| ! | AGAGCATATTTTCCTAAACA+TGG | - | chr8_1:33805988-33806007 | None:intergenic | 30.0% |
| ACATATTTCCCTTAAGTTAG+GGG | - | chr8_1:33806017-33806036 | None:intergenic | 30.0% | |
| GACATATTTCCCTTAAGTTA+GGG | - | chr8_1:33806018-33806037 | None:intergenic | 30.0% | |
| AGACATATTTCCCTTAAGTT+AGG | - | chr8_1:33806019-33806038 | None:intergenic | 30.0% | |
| !!! | TTCAAAATGGCCCTTTTTTT+TGG | + | chr8_1:33806087-33806106 | Msa1190660:intron | 30.0% |
| ! | CTTTCAAAAAGTTGCGATTT+TGG | - | chr8_1:33805929-33805948 | None:intergenic | 30.0% |
| !! | TCGCAACTTTTTGAAAGATA+AGG | + | chr8_1:33806155-33806174 | Msa1190660:intron | 30.0% |
| !! | CGCAACTTTTTGAAAGATAA+GGG | + | chr8_1:33806156-33806175 | Msa1190660:intron | 30.0% |
| !! | GCAACTTTTTGAAAGATAAG+GGG | + | chr8_1:33806157-33806176 | Msa1190660:intron | 30.0% |
| TGAAATTTCAAAGATTACCC+GGG | - | chr8_1:33806535-33806554 | None:intergenic | 30.0% | |
| !! | TCTTTGAAATTTCATCGTGA+TGG | + | chr8_1:33806541-33806560 | Msa1190660:intron | 30.0% |
| !! | CTTTGAAATTTCATCGTGAT+GGG | + | chr8_1:33806542-33806561 | Msa1190660:intron | 30.0% |
| ! | TTTGAAATTTCATCGTGATG+GGG | + | chr8_1:33806543-33806562 | Msa1190660:intron | 30.0% |
| ATTTCCGCTTCTCTAAATAG+CGG | - | chr8_1:33804643-33804662 | None:intergenic | 35.0% | |
| ATTTAGAGAAGCGGAAATAG+CGG | + | chr8_1:33804645-33804664 | Msa1190660:intron | 35.0% | |
| ! | GGTTTTTATCCTGCAAATAG+CGG | - | chr8_1:33804671-33804690 | None:intergenic | 35.0% |
| !!! | CTCATCAGAACCTTTTTTTC+AGG | - | chr8_1:33804885-33804904 | None:intergenic | 35.0% |
| ! | CTGAAAAAAAGGTTCTGATG+AGG | + | chr8_1:33804883-33804902 | Msa1190660:CDS | 35.0% |
| AACACAAAAACTTTCGTTGC+CGG | - | chr8_1:33804996-33805015 | None:intergenic | 35.0% | |
| GATTGCTAAACTACTAGTTC+CGG | - | chr8_1:33805084-33805103 | None:intergenic | 35.0% | |
| AAATGGACATAACTGACGAA+AGG | + | chr8_1:33805210-33805229 | Msa1190660:CDS | 35.0% | |
| AATGGACATAACTGACGAAA+GGG | + | chr8_1:33805211-33805230 | Msa1190660:CDS | 35.0% | |
| AAGGTCAAAATCACTCGTTT+AGG | + | chr8_1:33805269-33805288 | Msa1190660:CDS | 35.0% | |
| ! | ACTTCAAGAGGCTCAAATTT+TGG | + | chr8_1:33805732-33805751 | Msa1190660:intron | 35.0% |
| CTAAACTATCCCACCTAAAT+TGG | - | chr8_1:33805808-33805827 | None:intergenic | 35.0% | |
| !! | GCAACTTTTTGAAAGATAGG+GGG | - | chr8_1:33805924-33805943 | None:intergenic | 35.0% |
| !! | CGCAACTTTTTGAAAGATAG+GGG | - | chr8_1:33805925-33805944 | None:intergenic | 35.0% |
| ! | GCATATTTTCCTAAACATGG+GGG | - | chr8_1:33805985-33806004 | None:intergenic | 35.0% |
| ! | TCTTTTAACCCCCTAACTTA+AGG | + | chr8_1:33806005-33806024 | Msa1190660:intron | 35.0% |
| ! | CTTTTAACCCCCTAACTTAA+GGG | + | chr8_1:33806006-33806025 | Msa1190660:intron | 35.0% |
| CATATTTCCCTTAAGTTAGG+GGG | - | chr8_1:33806016-33806035 | None:intergenic | 35.0% | |
| !! | GGCCATTTTGAAAAGATAAG+GGG | - | chr8_1:33806079-33806098 | None:intergenic | 35.0% |
| !! | GGGCCATTTTGAAAAGATAA+GGG | - | chr8_1:33806080-33806099 | None:intergenic | 35.0% |
| !! | AGGGCCATTTTGAAAAGATA+AGG | - | chr8_1:33806081-33806100 | None:intergenic | 35.0% |
| ! | AACTTTGAAAACTGCTGAGA+AGG | - | chr8_1:33806123-33806142 | None:intergenic | 35.0% |
| ! | TCTCAGCAGTTTTCAAAGTT+AGG | + | chr8_1:33806123-33806142 | Msa1190660:intron | 35.0% |
| ! | CTCAGCAGTTTTCAAAGTTA+GGG | + | chr8_1:33806124-33806143 | Msa1190660:intron | 35.0% |
| ! | TCAGCAGTTTTCAAAGTTAG+GGG | + | chr8_1:33806125-33806144 | Msa1190660:intron | 35.0% |
| ATTAGGCTAAAGTGCAACTT+TGG | - | chr8_1:33806183-33806202 | None:intergenic | 35.0% | |
| CTACTATCAAGGCAAAAGAT+GGG | + | chr8_1:33806292-33806311 | Msa1190660:intron | 35.0% | |
| GGATAGATCATTGCAATTGT+TGG | + | chr8_1:33806564-33806583 | Msa1190660:intron | 35.0% | |
| ATTTCCGCTTCTCTAAATAG+CGG | - | chr8_1:33804643-33804662 | None:intergenic | 35.0% | |
| ATTTAGAGAAGCGGAAATAG+CGG | + | chr8_1:33804645-33804664 | Msa1190660:intron | 35.0% | |
| ! | GGTTTTTATCCTGCAAATAG+CGG | - | chr8_1:33804671-33804690 | None:intergenic | 35.0% |
| !!! | CTCATCAGAACCTTTTTTTC+AGG | - | chr8_1:33804885-33804904 | None:intergenic | 35.0% |
| ! | CTGAAAAAAAGGTTCTGATG+AGG | + | chr8_1:33804883-33804902 | Msa1190660:CDS | 35.0% |
| AACACAAAAACTTTCGTTGC+CGG | - | chr8_1:33804996-33805015 | None:intergenic | 35.0% | |
| GATTGCTAAACTACTAGTTC+CGG | - | chr8_1:33805084-33805103 | None:intergenic | 35.0% | |
| AAATGGACATAACTGACGAA+AGG | + | chr8_1:33805210-33805229 | Msa1190660:CDS | 35.0% | |
| AATGGACATAACTGACGAAA+GGG | + | chr8_1:33805211-33805230 | Msa1190660:CDS | 35.0% | |
| AAGGTCAAAATCACTCGTTT+AGG | + | chr8_1:33805269-33805288 | Msa1190660:CDS | 35.0% | |
| ! | ACTTCAAGAGGCTCAAATTT+TGG | + | chr8_1:33805732-33805751 | Msa1190660:intron | 35.0% |
| CTAAACTATCCCACCTAAAT+TGG | - | chr8_1:33805808-33805827 | None:intergenic | 35.0% | |
| !! | GCAACTTTTTGAAAGATAGG+GGG | - | chr8_1:33805924-33805943 | None:intergenic | 35.0% |
| !! | CGCAACTTTTTGAAAGATAG+GGG | - | chr8_1:33805925-33805944 | None:intergenic | 35.0% |
| ! | GCATATTTTCCTAAACATGG+GGG | - | chr8_1:33805985-33806004 | None:intergenic | 35.0% |
| ! | TCTTTTAACCCCCTAACTTA+AGG | + | chr8_1:33806005-33806024 | Msa1190660:intron | 35.0% |
| ! | CTTTTAACCCCCTAACTTAA+GGG | + | chr8_1:33806006-33806025 | Msa1190660:intron | 35.0% |
| CATATTTCCCTTAAGTTAGG+GGG | - | chr8_1:33806016-33806035 | None:intergenic | 35.0% | |
| !! | GGCCATTTTGAAAAGATAAG+GGG | - | chr8_1:33806079-33806098 | None:intergenic | 35.0% |
| !! | GGGCCATTTTGAAAAGATAA+GGG | - | chr8_1:33806080-33806099 | None:intergenic | 35.0% |
| !! | AGGGCCATTTTGAAAAGATA+AGG | - | chr8_1:33806081-33806100 | None:intergenic | 35.0% |
| ! | AACTTTGAAAACTGCTGAGA+AGG | - | chr8_1:33806123-33806142 | None:intergenic | 35.0% |
| ! | TCTCAGCAGTTTTCAAAGTT+AGG | + | chr8_1:33806123-33806142 | Msa1190660:intron | 35.0% |
| ! | CTCAGCAGTTTTCAAAGTTA+GGG | + | chr8_1:33806124-33806143 | Msa1190660:intron | 35.0% |
| ! | TCAGCAGTTTTCAAAGTTAG+GGG | + | chr8_1:33806125-33806144 | Msa1190660:intron | 35.0% |
| ATTAGGCTAAAGTGCAACTT+TGG | - | chr8_1:33806183-33806202 | None:intergenic | 35.0% | |
| CTACTATCAAGGCAAAAGAT+GGG | + | chr8_1:33806292-33806311 | Msa1190660:intron | 35.0% | |
| GGATAGATCATTGCAATTGT+TGG | + | chr8_1:33806564-33806583 | Msa1190660:intron | 35.0% | |
| TTAATAGCGGCGTTATAGCA+TGG | + | chr8_1:33804579-33804598 | Msa1190660:intron | 40.0% | |
| ! | CTTCTCTAAATAGCGGAAAG+CGG | - | chr8_1:33804636-33804655 | None:intergenic | 40.0% |
| CTTTCCGCTATTTAGAGAAG+CGG | + | chr8_1:33804636-33804655 | Msa1190660:intron | 40.0% | |
| AAGCTTGCACATAGCTTAAC+AGG | - | chr8_1:33804828-33804847 | None:intergenic | 40.0% | |
| ! | ATGAGGAACTCTGTTTTCAG+AGG | + | chr8_1:33804900-33804919 | Msa1190660:CDS | 40.0% |
| AGAGAGGTAGCGTATGTTAT+TGG | + | chr8_1:33805047-33805066 | Msa1190660:CDS | 40.0% | |
| GGTAGCGTATGTTATTGGTA+TGG | + | chr8_1:33805052-33805071 | Msa1190660:CDS | 40.0% | |
| ATGGACATAACTGACGAAAG+GGG | + | chr8_1:33805212-33805231 | Msa1190660:CDS | 40.0% | |
| ACTGACGAAAGGGGTAAATA+TGG | + | chr8_1:33805221-33805240 | Msa1190660:CDS | 40.0% | |
| GAGGTCAAAATCACTCGTTT+AGG | + | chr8_1:33805409-33805428 | Msa1190660:intron | 40.0% | |
| GTTAGGCTAAAGTGCAACTT+TGG | + | chr8_1:33805898-33805917 | Msa1190660:intron | 40.0% | |
| !! | AATTTTGGTCCCCCATGTTT+AGG | + | chr8_1:33805973-33805992 | Msa1190660:intron | 40.0% |
| ! | GGCCCCTTATCTTTTCAAAA+TGG | + | chr8_1:33806074-33806093 | Msa1190660:intron | 40.0% |
| CGACACGTGTCCAAAAAAAA+GGG | - | chr8_1:33806100-33806119 | None:intergenic | 40.0% | |
| ! | CAGCAGTTTTCAAAGTTAGG+GGG | + | chr8_1:33806126-33806145 | Msa1190660:intron | 40.0% |
| ! | TAGCCAAATCAAAGCATCAC+AGG | - | chr8_1:33806258-33806277 | None:intergenic | 40.0% |
| !! | CCATCTTTTGCCTTGATAGT+AGG | - | chr8_1:33806294-33806313 | None:intergenic | 40.0% |
| CCTACTATCAAGGCAAAAGA+TGG | + | chr8_1:33806291-33806310 | Msa1190660:intron | 40.0% | |
| ATTCAACGAGTCTATAGCCT+TGG | + | chr8_1:33806501-33806520 | Msa1190660:intron | 40.0% | |
| TTAATAGCGGCGTTATAGCA+TGG | + | chr8_1:33804579-33804598 | Msa1190660:intron | 40.0% | |
| ! | CTTCTCTAAATAGCGGAAAG+CGG | - | chr8_1:33804636-33804655 | None:intergenic | 40.0% |
| CTTTCCGCTATTTAGAGAAG+CGG | + | chr8_1:33804636-33804655 | Msa1190660:intron | 40.0% | |
| AAGCTTGCACATAGCTTAAC+AGG | - | chr8_1:33804828-33804847 | None:intergenic | 40.0% | |
| ! | ATGAGGAACTCTGTTTTCAG+AGG | + | chr8_1:33804900-33804919 | Msa1190660:CDS | 40.0% |
| AGAGAGGTAGCGTATGTTAT+TGG | + | chr8_1:33805047-33805066 | Msa1190660:CDS | 40.0% | |
| GGTAGCGTATGTTATTGGTA+TGG | + | chr8_1:33805052-33805071 | Msa1190660:CDS | 40.0% | |
| ATGGACATAACTGACGAAAG+GGG | + | chr8_1:33805212-33805231 | Msa1190660:CDS | 40.0% | |
| ACTGACGAAAGGGGTAAATA+TGG | + | chr8_1:33805221-33805240 | Msa1190660:CDS | 40.0% | |
| GAGGTCAAAATCACTCGTTT+AGG | + | chr8_1:33805409-33805428 | Msa1190660:intron | 40.0% | |
| GTTAGGCTAAAGTGCAACTT+TGG | + | chr8_1:33805898-33805917 | Msa1190660:intron | 40.0% | |
| !! | AATTTTGGTCCCCCATGTTT+AGG | + | chr8_1:33805973-33805992 | Msa1190660:intron | 40.0% |
| ! | GGCCCCTTATCTTTTCAAAA+TGG | + | chr8_1:33806074-33806093 | Msa1190660:intron | 40.0% |
| CGACACGTGTCCAAAAAAAA+GGG | - | chr8_1:33806100-33806119 | None:intergenic | 40.0% | |
| ! | CAGCAGTTTTCAAAGTTAGG+GGG | + | chr8_1:33806126-33806145 | Msa1190660:intron | 40.0% |
| ! | TAGCCAAATCAAAGCATCAC+AGG | - | chr8_1:33806258-33806277 | None:intergenic | 40.0% |
| !! | CCATCTTTTGCCTTGATAGT+AGG | - | chr8_1:33806294-33806313 | None:intergenic | 40.0% |
| CCTACTATCAAGGCAAAAGA+TGG | + | chr8_1:33806291-33806310 | Msa1190660:intron | 40.0% | |
| ATTCAACGAGTCTATAGCCT+TGG | + | chr8_1:33806501-33806520 | Msa1190660:intron | 40.0% | |
| ! | AAAGCGGCCTTATAGCATAG+CGG | - | chr8_1:33804620-33804639 | None:intergenic | 45.0% |
| GCGACACGTGTCCAAAAAAA+AGG | - | chr8_1:33806101-33806120 | None:intergenic | 45.0% | |
| CGCCTGTTGTTGTGTTTGTT+TGG | + | chr8_1:33806232-33806251 | Msa1190660:intron | 45.0% | |
| GGCCAAACAAACACAACAAC+AGG | - | chr8_1:33806237-33806256 | None:intergenic | 45.0% | |
| TGGCCTGTGATGCTTTGATT+TGG | + | chr8_1:33806252-33806271 | Msa1190660:intron | 45.0% | |
| AACGGAATTAACCAGACAGC+AGG | - | chr8_1:33806321-33806340 | None:intergenic | 45.0% | |
| CATAGCTATTTAGCAGGCTG+AGG | - | chr8_1:33806355-33806374 | None:intergenic | 45.0% | |
| CAGCCTGCTAAATAGCTATG+TGG | + | chr8_1:33806355-33806374 | Msa1190660:CDS | 45.0% | |
| CCTCCACATAGCTATTTAGC+AGG | - | chr8_1:33806361-33806380 | None:intergenic | 45.0% | |
| CCTGCTAAATAGCTATGTGG+AGG | + | chr8_1:33806358-33806377 | Msa1190660:CDS | 45.0% | |
| GTTATTGCCTCAAACTTCCG+TGG | - | chr8_1:33806429-33806448 | None:intergenic | 45.0% | |
| ! | CGGAAGTTTGAGGCAATAAC+AGG | + | chr8_1:33806429-33806448 | Msa1190660:intron | 45.0% |
| TGTGATGCCCTTAGATGTTC+TGG | + | chr8_1:33806454-33806473 | Msa1190660:intron | 45.0% | |
| GTGATGCCCTTAGATGTTCT+GGG | + | chr8_1:33806455-33806474 | Msa1190660:intron | 45.0% | |
| !! | GCAATTGTTGGTCTTCAACG+AGG | + | chr8_1:33806576-33806595 | Msa1190660:CDS | 45.0% |
| ACTTCACCGGACCATTCAAT+CGG | - | chr8_1:33806678-33806697 | None:intergenic | 45.0% | |
| ! | AAAGCGGCCTTATAGCATAG+CGG | - | chr8_1:33804620-33804639 | None:intergenic | 45.0% |
| GCGACACGTGTCCAAAAAAA+AGG | - | chr8_1:33806101-33806120 | None:intergenic | 45.0% | |
| CGCCTGTTGTTGTGTTTGTT+TGG | + | chr8_1:33806232-33806251 | Msa1190660:intron | 45.0% | |
| GGCCAAACAAACACAACAAC+AGG | - | chr8_1:33806237-33806256 | None:intergenic | 45.0% | |
| TGGCCTGTGATGCTTTGATT+TGG | + | chr8_1:33806252-33806271 | Msa1190660:intron | 45.0% | |
| AACGGAATTAACCAGACAGC+AGG | - | chr8_1:33806321-33806340 | None:intergenic | 45.0% | |
| CATAGCTATTTAGCAGGCTG+AGG | - | chr8_1:33806355-33806374 | None:intergenic | 45.0% | |
| CAGCCTGCTAAATAGCTATG+TGG | + | chr8_1:33806355-33806374 | Msa1190660:CDS | 45.0% | |
| CCTCCACATAGCTATTTAGC+AGG | - | chr8_1:33806361-33806380 | None:intergenic | 45.0% | |
| CCTGCTAAATAGCTATGTGG+AGG | + | chr8_1:33806358-33806377 | Msa1190660:CDS | 45.0% | |
| GTTATTGCCTCAAACTTCCG+TGG | - | chr8_1:33806429-33806448 | None:intergenic | 45.0% | |
| ! | CGGAAGTTTGAGGCAATAAC+AGG | + | chr8_1:33806429-33806448 | Msa1190660:intron | 45.0% |
| TGTGATGCCCTTAGATGTTC+TGG | + | chr8_1:33806454-33806473 | Msa1190660:intron | 45.0% | |
| GTGATGCCCTTAGATGTTCT+GGG | + | chr8_1:33806455-33806474 | Msa1190660:intron | 45.0% | |
| !! | GCAATTGTTGGTCTTCAACG+AGG | + | chr8_1:33806576-33806595 | Msa1190660:CDS | 45.0% |
| ACTTCACCGGACCATTCAAT+CGG | - | chr8_1:33806678-33806697 | None:intergenic | 45.0% | |
| ! | CTTATAGCATAGCGGAGAGG+TGG | - | chr8_1:33804612-33804631 | None:intergenic | 50.0% |
| CACCTCTCCGCTATGCTATA+AGG | + | chr8_1:33804610-33804629 | Msa1190660:intron | 50.0% | |
| AAATAGCGGCCGCTATTTGC+AGG | + | chr8_1:33804659-33804678 | Msa1190660:intron | 50.0% | |
| CTGCGGAACTTTCTCCAATG+TGG | - | chr8_1:33804762-33804781 | None:intergenic | 50.0% | |
| GCTGAGGTCTCGTTCGTTAA+CGG | - | chr8_1:33806339-33806358 | None:intergenic | 50.0% | |
| TATGTGGAGGTAACCCTCCA+CGG | + | chr8_1:33806371-33806390 | Msa1190660:intron | 50.0% | |
| ! | CCATAGTCCCTCTAAGAAGC+TGG | - | chr8_1:33806397-33806416 | None:intergenic | 50.0% |
| CCAGCTTCTTAGAGGGACTA+TGG | + | chr8_1:33806394-33806413 | Msa1190660:intron | 50.0% | |
| TCAAACTTCCGTGGCCTAAG+CGG | - | chr8_1:33806420-33806439 | None:intergenic | 50.0% | |
| ATTCAATCGGTAGGAGCGAC+GGG | - | chr8_1:33806665-33806684 | None:intergenic | 50.0% | |
| CATTCAATCGGTAGGAGCGA+CGG | - | chr8_1:33806666-33806685 | None:intergenic | 50.0% | |
| ! | CTCCTACCGATTGAATGGTC+CGG | + | chr8_1:33806669-33806688 | Msa1190660:CDS | 50.0% |
| ! | GAATGGTCCGGTGAAGTGTT+CGG | + | chr8_1:33806681-33806700 | Msa1190660:CDS | 50.0% |
| ! | CTTATAGCATAGCGGAGAGG+TGG | - | chr8_1:33804612-33804631 | None:intergenic | 50.0% |
| CACCTCTCCGCTATGCTATA+AGG | + | chr8_1:33804610-33804629 | Msa1190660:intron | 50.0% | |
| AAATAGCGGCCGCTATTTGC+AGG | + | chr8_1:33804659-33804678 | Msa1190660:intron | 50.0% | |
| CTGCGGAACTTTCTCCAATG+TGG | - | chr8_1:33804762-33804781 | None:intergenic | 50.0% | |
| GCTGAGGTCTCGTTCGTTAA+CGG | - | chr8_1:33806339-33806358 | None:intergenic | 50.0% | |
| TATGTGGAGGTAACCCTCCA+CGG | + | chr8_1:33806371-33806390 | Msa1190660:intron | 50.0% | |
| ! | CCATAGTCCCTCTAAGAAGC+TGG | - | chr8_1:33806397-33806416 | None:intergenic | 50.0% |
| CCAGCTTCTTAGAGGGACTA+TGG | + | chr8_1:33806394-33806413 | Msa1190660:intron | 50.0% | |
| TCAAACTTCCGTGGCCTAAG+CGG | - | chr8_1:33806420-33806439 | None:intergenic | 50.0% | |
| ATTCAATCGGTAGGAGCGAC+GGG | - | chr8_1:33806665-33806684 | None:intergenic | 50.0% | |
| CATTCAATCGGTAGGAGCGA+CGG | - | chr8_1:33806666-33806685 | None:intergenic | 50.0% | |
| ! | CTCCTACCGATTGAATGGTC+CGG | + | chr8_1:33806669-33806688 | Msa1190660:CDS | 50.0% |
| ! | GAATGGTCCGGTGAAGTGTT+CGG | + | chr8_1:33806681-33806700 | Msa1190660:CDS | 50.0% |
| ! | GGCCTTATAGCATAGCGGAG+AGG | - | chr8_1:33804615-33804634 | None:intergenic | 55.0% |
| AAGATGGGACACCTGCTGTC+TGG | + | chr8_1:33806307-33806326 | Msa1190660:CDS | 55.0% | |
| TCTAAGAAGCTGGCCGTGGA+GGG | - | chr8_1:33806387-33806406 | None:intergenic | 55.0% | |
| TCCACGGCCAGCTTCTTAGA+GGG | + | chr8_1:33806387-33806406 | Msa1190660:intron | 55.0% | |
| TAGAGGGACTATGGCCGCTT+AGG | + | chr8_1:33806403-33806422 | Msa1190660:intron | 55.0% | |
| GCTTAGGCCACGGAAGTTTG+AGG | + | chr8_1:33806419-33806438 | Msa1190660:intron | 55.0% | |
| GTGCGGCCCAGAACATCTAA+GGG | - | chr8_1:33806464-33806483 | None:intergenic | 55.0% | |
| ! | AGTCTATAGCCTTGGCCGAC+AGG | + | chr8_1:33806509-33806528 | Msa1190660:intron | 55.0% |
| CAAAGATTACCCGGGCCTGT+CGG | - | chr8_1:33806527-33806546 | None:intergenic | 55.0% | |
| GCTGATGACTCGCGCTTACT+AGG | - | chr8_1:33806606-33806625 | None:intergenic | 55.0% | |
| ! | CGTCGCTCCTACCGATTGAA+TGG | + | chr8_1:33806664-33806683 | Msa1190660:CDS | 55.0% |
| CACCGGACCATTCAATCGGT+AGG | - | chr8_1:33806674-33806693 | None:intergenic | 55.0% | |
| CCGCAATCCGAACACTTCAC+CGG | - | chr8_1:33806691-33806710 | None:intergenic | 55.0% | |
| ! | CCGGTGAAGTGTTCGGATTG+CGG | + | chr8_1:33806688-33806707 | Msa1190660:CDS | 55.0% |
| GTGGACTTCTCACAACGTCG+CGG | - | chr8_1:33806734-33806753 | None:intergenic | 55.0% | |
| ! | GGCCTTATAGCATAGCGGAG+AGG | - | chr8_1:33804615-33804634 | None:intergenic | 55.0% |
| AAGATGGGACACCTGCTGTC+TGG | + | chr8_1:33806307-33806326 | Msa1190660:CDS | 55.0% | |
| TCTAAGAAGCTGGCCGTGGA+GGG | - | chr8_1:33806387-33806406 | None:intergenic | 55.0% | |
| TCCACGGCCAGCTTCTTAGA+GGG | + | chr8_1:33806387-33806406 | Msa1190660:intron | 55.0% | |
| TAGAGGGACTATGGCCGCTT+AGG | + | chr8_1:33806403-33806422 | Msa1190660:intron | 55.0% | |
| GCTTAGGCCACGGAAGTTTG+AGG | + | chr8_1:33806419-33806438 | Msa1190660:intron | 55.0% | |
| GTGCGGCCCAGAACATCTAA+GGG | - | chr8_1:33806464-33806483 | None:intergenic | 55.0% | |
| ! | AGTCTATAGCCTTGGCCGAC+AGG | + | chr8_1:33806509-33806528 | Msa1190660:intron | 55.0% |
| CAAAGATTACCCGGGCCTGT+CGG | - | chr8_1:33806527-33806546 | None:intergenic | 55.0% | |
| GCTGATGACTCGCGCTTACT+AGG | - | chr8_1:33806606-33806625 | None:intergenic | 55.0% | |
| ! | CGTCGCTCCTACCGATTGAA+TGG | + | chr8_1:33806664-33806683 | Msa1190660:CDS | 55.0% |
| CACCGGACCATTCAATCGGT+AGG | - | chr8_1:33806674-33806693 | None:intergenic | 55.0% | |
| CCGCAATCCGAACACTTCAC+CGG | - | chr8_1:33806691-33806710 | None:intergenic | 55.0% | |
| ! | CCGGTGAAGTGTTCGGATTG+CGG | + | chr8_1:33806688-33806707 | Msa1190660:CDS | 55.0% |
| GTGGACTTCTCACAACGTCG+CGG | - | chr8_1:33806734-33806753 | None:intergenic | 55.0% | |
| ! | CTCTAAGAAGCTGGCCGTGG+AGG | - | chr8_1:33806388-33806407 | None:intergenic | 60.0% |
| CTCCACGGCCAGCTTCTTAG+AGG | + | chr8_1:33806386-33806405 | Msa1190660:intron | 60.0% | |
| ! | TCCCTCTAAGAAGCTGGCCG+TGG | - | chr8_1:33806391-33806410 | None:intergenic | 60.0% |
| GACTATGGCCGCTTAGGCCA+CGG | + | chr8_1:33806409-33806428 | Msa1190660:intron | 60.0% | |
| CGTGCGGCCCAGAACATCTA+AGG | - | chr8_1:33806465-33806484 | None:intergenic | 60.0% | |
| ACATCAGTGTAGCGCGCGTG+CGG | - | chr8_1:33806481-33806500 | None:intergenic | 60.0% | |
| GGCGGTGTGTACAAAGGGCA+GGG | - | chr8_1:33806644-33806663 | None:intergenic | 60.0% | |
| CGACGGGCGGTGTGTACAAA+GGG | - | chr8_1:33806649-33806668 | None:intergenic | 60.0% | |
| TGTTCGGATTGCGGCGACGT+GGG | + | chr8_1:33806697-33806716 | Msa1190660:CDS | 60.0% | |
| ! | CTCTAAGAAGCTGGCCGTGG+AGG | - | chr8_1:33806388-33806407 | None:intergenic | 60.0% |
| CTCCACGGCCAGCTTCTTAG+AGG | + | chr8_1:33806386-33806405 | Msa1190660:intron | 60.0% | |
| ! | TCCCTCTAAGAAGCTGGCCG+TGG | - | chr8_1:33806391-33806410 | None:intergenic | 60.0% |
| GACTATGGCCGCTTAGGCCA+CGG | + | chr8_1:33806409-33806428 | Msa1190660:intron | 60.0% | |
| CGTGCGGCCCAGAACATCTA+AGG | - | chr8_1:33806465-33806484 | None:intergenic | 60.0% | |
| ACATCAGTGTAGCGCGCGTG+CGG | - | chr8_1:33806481-33806500 | None:intergenic | 60.0% | |
| GGCGGTGTGTACAAAGGGCA+GGG | - | chr8_1:33806644-33806663 | None:intergenic | 60.0% | |
| CGACGGGCGGTGTGTACAAA+GGG | - | chr8_1:33806649-33806668 | None:intergenic | 60.0% | |
| TGTTCGGATTGCGGCGACGT+GGG | + | chr8_1:33806697-33806716 | Msa1190660:CDS | 60.0% | |
| GTCGGCGTTACGCGCCACAT+TGG | + | chr8_1:33804745-33804764 | Msa1190660:intron | 65.0% | |
| ! | ATAGCCTTGGCCGACAGGCC+CGG | + | chr8_1:33806514-33806533 | Msa1190660:intron | 65.0% |
| GGGCGGTGTGTACAAAGGGC+AGG | - | chr8_1:33806645-33806664 | None:intergenic | 65.0% | |
| GCGACGGGCGGTGTGTACAA+AGG | - | chr8_1:33806650-33806669 | None:intergenic | 65.0% | |
| CAATCGGTAGGAGCGACGGG+CGG | - | chr8_1:33806662-33806681 | None:intergenic | 65.0% | |
| GTGTTCGGATTGCGGCGACG+TGG | + | chr8_1:33806696-33806715 | Msa1190660:CDS | 65.0% | |
| GTCGGCGTTACGCGCCACAT+TGG | + | chr8_1:33804745-33804764 | Msa1190660:intron | 65.0% | |
| ! | ATAGCCTTGGCCGACAGGCC+CGG | + | chr8_1:33806514-33806533 | Msa1190660:intron | 65.0% |
| GGGCGGTGTGTACAAAGGGC+AGG | - | chr8_1:33806645-33806664 | None:intergenic | 65.0% | |
| GCGACGGGCGGTGTGTACAA+AGG | - | chr8_1:33806650-33806669 | None:intergenic | 65.0% | |
| CAATCGGTAGGAGCGACGGG+CGG | - | chr8_1:33806662-33806681 | None:intergenic | 65.0% | |
| GTGTTCGGATTGCGGCGACG+TGG | + | chr8_1:33806696-33806715 | Msa1190660:CDS | 65.0% | |
| ! | TAGCCTTGGCCGACAGGCCC+GGG | + | chr8_1:33806515-33806534 | Msa1190660:intron | 70.0% |
| TTACCCGGGCCTGTCGGCCA+AGG | - | chr8_1:33806521-33806540 | None:intergenic | 70.0% | |
| TCGGATTGCGGCGACGTGGG+CGG | + | chr8_1:33806700-33806719 | Msa1190660:CDS | 70.0% | |
| ! | TAGCCTTGGCCGACAGGCCC+GGG | + | chr8_1:33806515-33806534 | Msa1190660:intron | 70.0% |
| TTACCCGGGCCTGTCGGCCA+AGG | - | chr8_1:33806521-33806540 | None:intergenic | 70.0% | |
| TCGGATTGCGGCGACGTGGG+CGG | + | chr8_1:33806700-33806719 | Msa1190660:CDS | 70.0% | |
| ! | CGGCGACGTGGGCGGTTCGC+TGG | + | chr8_1:33806708-33806727 | Msa1190660:CDS | 80.0% |
| ! | CGGCGACGTGGGCGGTTCGC+TGG | + | chr8_1:33806708-33806727 | Msa1190660:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 33804523 | 33806770 | 33804523 | ID=Msa1190660;Name=Msa1190660 |
| chr8_1 | mRNA | 33804523 | 33806770 | 33804523 | ID=Msa1190660-mRNA-1;Parent=Msa1190660;Name=Msa1190660-mRNA-1;_AED=0.33;_eAED=0.37;_QI=0|0|0|0.5|1|1|4|0|259 |
| chr8_1 | exon | 33804523 | 33804540 | 33804523 | ID=Msa1190660-mRNA-1:exon:11401;Parent=Msa1190660-mRNA-1 |
| chr8_1 | exon | 33804807 | 33805290 | 33804807 | ID=Msa1190660-mRNA-1:exon:11402;Parent=Msa1190660-mRNA-1 |
| chr8_1 | exon | 33806303 | 33806379 | 33806303 | ID=Msa1190660-mRNA-1:exon:11403;Parent=Msa1190660-mRNA-1 |
| chr8_1 | exon | 33806570 | 33806770 | 33806570 | ID=Msa1190660-mRNA-1:exon:11404;Parent=Msa1190660-mRNA-1 |
| chr8_1 | CDS | 33804523 | 33804540 | 33804523 | ID=Msa1190660-mRNA-1:cds;Parent=Msa1190660-mRNA-1 |
| chr8_1 | CDS | 33804807 | 33805290 | 33804807 | ID=Msa1190660-mRNA-1:cds;Parent=Msa1190660-mRNA-1 |
| chr8_1 | CDS | 33806303 | 33806379 | 33806303 | ID=Msa1190660-mRNA-1:cds;Parent=Msa1190660-mRNA-1 |
| chr8_1 | CDS | 33806570 | 33806770 | 33806570 | ID=Msa1190660-mRNA-1:cds;Parent=Msa1190660-mRNA-1 |
| Gene Sequence |
| Protein sequence |
