AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1191660

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1191660 MtrunA17_Chr4g0035371 53.936 343 134 9 1 328 1 334 2.78e-103 309
Msa1191660 MtrunA17_Chr8g0380881 55.363 289 93 3 118 396 2 264 1.02e-85 268
Msa1191660 MtrunA17_Chr8g0380881 58.394 137 55 2 6 142 327 461 4.93e-41 151
Msa1191660 MtrunA17_Chr8g0380871 66.116 121 31 2 215 325 1 121 3.27e-45 153
Msa1191660 MtrunA17_Chr1g0186411 31.071 280 164 10 22 273 49 327 1.75e-23 103
Msa1191660 MtrunA17_Chr1g0186421 30.651 261 163 9 22 265 36 295 1.65e-22 97.8
Msa1191660 MtrunA17_Chr1g0168221 29.412 255 163 7 22 261 53 305 5.98e-22 98.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1191660 AT5G52330.4 27.113 284 177 9 15 270 1 282 5.09e-20 91.7
Msa1191660 AT5G52330.3 27.113 284 177 9 15 270 1 282 5.09e-20 91.7
Msa1191660 AT5G52330.1 27.113 284 177 9 15 270 1 282 5.09e-20 91.7
Msa1191660 AT5G43560.2 29.921 254 135 7 50 270 90 333 5.48e-19 90.1
Msa1191660 AT5G43560.1 29.921 254 135 7 50 270 90 333 5.48e-19 90.1
Msa1191660 AT5G52330.2 27.885 208 129 5 82 270 26 231 2.09e-17 83.2
Msa1191660 AT1G04300.1 29.084 251 163 8 25 261 60 309 3.30e-16 81.6
Msa1191660 AT1G04300.4 29.386 228 150 6 44 261 64 290 1.40e-15 79.3
Msa1191660 AT1G04300.3 27.799 259 164 8 25 261 60 317 1.86e-14 75.9
Msa1191660 AT1G04300.5 30.270 185 123 4 82 261 96 279 1.99e-14 75.9
Msa1191660 AT1G04300.2 33.824 136 88 1 128 261 97 232 6.07e-14 74.3

Find 136 sgRNAs with CRISPR-Local

Find 292 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAATCGAATTCGGAAAATTT+TGG 0.132613 8_1:+36362256 Msa1191660:CDS
TATATAGAAGACTCAAATTT+TGG 0.148345 8_1:-36361423 None:intergenic
CACTTTGGCTCAACAATTCT+TGG 0.170812 8_1:-36361648 None:intergenic
AAGAAGAGATTGATCTAAAA+AGG 0.201486 8_1:-36361455 None:intergenic
TCATTTCTCTTTGGTGTAAT+TGG 0.202460 8_1:-36365361 None:intergenic
ACATTTGGTCCTTCGAAATT+TGG 0.203947 8_1:-36364753 None:intergenic
CTGAGAATGCTTTCAGATAT+AGG 0.259223 8_1:-36364994 None:intergenic
GTTTGGTTCAAGTATGATAT+TGG 0.262834 8_1:-36361619 None:intergenic
TTTCGAAGGACCAAATGTTT+TGG 0.266996 8_1:+36364758 Msa1191660:CDS
GGAAGAGGATTTGTCTGTTC+TGG 0.276453 8_1:+36365520 Msa1191660:CDS
CTAATAACCTTATGCACTAT+TGG 0.279351 8_1:+36361799 Msa1191660:five_prime_UTR
TTGTTCTTGACTGGATATTC+AGG 0.309174 8_1:+36365046 Msa1191660:CDS
ACACATTTATCATTTCTCTT+TGG 0.320922 8_1:-36365370 None:intergenic
CCATGCATTGGTTTCTGCTT+TGG 0.325209 8_1:+36365949 Msa1191660:three_prime_UTR
TTGTATTGGTGGTATGAGAT+AGG 0.328758 8_1:+36362154 Msa1191660:five_prime_UTR
TCTACTTGAACATTATCCTT+AGG 0.329531 8_1:-36362810 None:intergenic
CTTGTTCTTCCCAAAACATT+TGG 0.329642 8_1:-36364768 None:intergenic
GAATTGCAGATTCAGATGTT+TGG 0.330521 8_1:+36362831 Msa1191660:CDS
ATGGATGCAGGCATAAAATT+CGG 0.336161 8_1:+36365245 Msa1191660:intron
TAGGGTGATGTTTACTGTCC+TGG 0.337727 8_1:+36366038 Msa1191660:three_prime_UTR
TGAATCGATTGCAGCAGATT+TGG 0.340536 8_1:+36365499 Msa1191660:CDS
ACCATCTTCTTCAACAACTT+TGG 0.352577 8_1:-36362282 None:intergenic
TACCAACAACCTCTGTAAAC+AGG 0.355045 8_1:-36364960 None:intergenic
TTTGGTTCAAGTATGATATT+GGG 0.356816 8_1:-36361618 None:intergenic
AATTGCAGATTCAGATGTTT+GGG 0.358939 8_1:+36362832 Msa1191660:CDS
TTGTCAAAATTGAGGAAGAT+AGG 0.359554 8_1:+36364914 Msa1191660:CDS
AAAATTGAGGAAGATAGGTT+TGG 0.364311 8_1:+36364919 Msa1191660:CDS
TGGATGCAGGCATAAAATTC+GGG 0.367614 8_1:+36365246 Msa1191660:intron
TGTGACATCTCCTTTGCTAA+TGG 0.368780 8_1:+36364837 Msa1191660:CDS
ATCTTGGTGTTTCCATGCAT+TGG 0.374421 8_1:+36365937 Msa1191660:three_prime_UTR
TTGAAGTTGGAGAATATAAA+TGG 0.374642 8_1:+36362381 Msa1191660:CDS
ACAATTCTTGGAATGAGGTT+TGG 0.392315 8_1:-36361636 None:intergenic
GAGCACATTGTCATTCTTGT+TGG 0.399027 8_1:+36365985 Msa1191660:three_prime_UTR
TCGATTCCACTCAGTCTCTA+AGG 0.403616 8_1:+36362731 Msa1191660:CDS
ATAAACTTATTACATTAGAA+AGG 0.405503 8_1:+36361844 Msa1191660:five_prime_UTR
CTACTTGAACATTATCCTTA+GGG 0.406059 8_1:-36362809 None:intergenic
CTCAATACCAATAGTGCATA+AGG 0.411383 8_1:-36361806 None:intergenic
TTCGTAATCGTAATCGAATT+CGG 0.415184 8_1:+36362246 Msa1191660:CDS
GAATCCTCATATCGAGCAAT+CGG 0.420819 8_1:-36362350 None:intergenic
CTCAGTCTCTAAGGCTCACC+GGG 0.424130 8_1:+36362740 Msa1191660:CDS
AGTGTTTATGTATATTGTAT+TGG 0.425445 8_1:+36362140 Msa1191660:five_prime_UTR
AATGACTTGGTTATAAATGC+TGG 0.427903 8_1:+36365563 Msa1191660:CDS
AAATTGAGGAAGATAGGTTT+GGG 0.431067 8_1:+36364920 Msa1191660:CDS
CTAGCAATTAGCACCTTGCT+AGG 0.443656 8_1:+36366019 Msa1191660:three_prime_UTR
TCCAAAGTTGTTGAAGAAGA+TGG 0.446156 8_1:+36362281 Msa1191660:CDS
CTTGAGCGTGCCCGTGAAGA+AGG 0.452362 8_1:+36362777 Msa1191660:CDS
GATTCTAGAGTCATTGAAGT+TGG 0.458905 8_1:+36362368 Msa1191660:CDS
TGGAAATGTTTGTTCTTGAC+TGG 0.459040 8_1:+36365037 Msa1191660:CDS
TGTAACCTAGTATCTCTCCT+AGG 0.470925 8_1:-36361769 None:intergenic
TTGCAGTTTCCGTACTTTCG+TGG 0.470949 8_1:+36364720 Msa1191660:intron
GCTCAACAATTCTTGGAATG+AGG 0.471996 8_1:-36361641 None:intergenic
TGTATTGGTGGTATGAGATA+GGG 0.473194 8_1:+36362155 Msa1191660:five_prime_UTR
ACATATATACATACAACAAT+GGG 0.476719 8_1:+36361484 Msa1191660:five_prime_UTR
TACCTGTACAATTAGTTAGC+AGG 0.478278 8_1:-36362615 None:intergenic
TAAACTTATTACATTAGAAA+GGG 0.478646 8_1:+36361845 Msa1191660:five_prime_UTR
TGAAAGAAAGATGGAGGCGA+AGG 0.479885 8_1:+36362220 Msa1191660:exon
TACCTAGTATCATCAGATCA+AGG 0.482621 8_1:+36361515 Msa1191660:five_prime_UTR
GGCTAAGTTTGTCAAAATTG+AGG 0.490661 8_1:+36364906 Msa1191660:CDS
CAGCTCGATACTTCTTTACA+AGG 0.495077 8_1:-36363041 None:intergenic
TACACTGCTAGATATCCCTT+TGG 0.495112 8_1:-36361565 None:intergenic
CACTTTCTTCCACGAAAGTA+CGG 0.497063 8_1:-36364729 None:intergenic
TGAGGAAGATAGGTTTGGGT+TGG 0.498512 8_1:+36364924 Msa1191660:CDS
TCCCTGTTTACAGAGGTTGT+TGG 0.499489 8_1:+36364958 Msa1191660:CDS
AGATCACAATGCCTCAGGTC+AGG 0.502340 8_1:+36365592 Msa1191660:CDS
ACTTCTTTACAAGGAGAGGC+TGG 0.502762 8_1:-36363032 None:intergenic
TGATAAATGTGTAGAAGAGA+TGG 0.504283 8_1:+36365381 Msa1191660:CDS
TGAAAAGAAGTCCAGGAGAA+AGG 0.506021 8_1:+36365300 Msa1191660:CDS
TTTGAATATGACCATCCAAT+GGG 0.507943 8_1:+36361679 Msa1191660:five_prime_UTR
GGTCAAGAAAACCTTCTTCA+CGG 0.511941 8_1:-36362788 None:intergenic
GAGAGCTGATCTTAATGACT+TGG 0.513006 8_1:+36365550 Msa1191660:CDS
GTTTATGTATATTGTATTGG+TGG 0.514211 8_1:+36362143 Msa1191660:five_prime_UTR
GGGATATCTAGCAGTGTATG+TGG 0.515556 8_1:+36361570 Msa1191660:five_prime_UTR
AGGGTGATGTTTACTGTCCT+GGG 0.516910 8_1:+36366039 Msa1191660:three_prime_UTR
AAACCCGATTGCTCGATATG+AGG 0.516947 8_1:+36362346 Msa1191660:CDS
ATAATCTCAAGAAAACTGTA+AGG 0.518600 8_1:-36365916 None:intergenic
AAAATCTGTGGACGTGCCAA+AGG 0.519714 8_1:+36361549 Msa1191660:five_prime_UTR
ACCTGTACAATTAGTTAGCA+GGG 0.522782 8_1:-36362614 None:intergenic
ACTCAGTCTCTAAGGCTCAC+CGG 0.523587 8_1:+36362739 Msa1191660:CDS
GCCCTTGATCTGATGATACT+AGG 0.523987 8_1:-36361517 None:intergenic
CACATATATACATACAACAA+TGG 0.530806 8_1:+36361483 Msa1191660:five_prime_UTR
GAAGATAGGTTTGGGTTGGT+CGG 0.531326 8_1:+36364928 Msa1191660:CDS
TGTAGAAGAGATGGAGCAAA+CGG 0.533264 8_1:+36365390 Msa1191660:CDS
GTTTGAATTGAATTTGCCCT+AGG 0.534610 8_1:+36361752 Msa1191660:five_prime_UTR
AATCCTCATATCGAGCAATC+GGG 0.535556 8_1:-36362349 None:intergenic
ATCGAACTGAAAAGAAGTCC+AGG 0.536072 8_1:+36365293 Msa1191660:CDS
GTCAAGAAAACCTTCTTCAC+GGG 0.545248 8_1:-36362787 None:intergenic
ATTGAAGATCACAATGCCTC+AGG 0.545760 8_1:+36365587 Msa1191660:CDS
GGTGCTAATTGCTAGCAAGT+TGG 0.556651 8_1:-36366011 None:intergenic
TTTGCCCTAGGAGAGATACT+AGG 0.557518 8_1:+36361764 Msa1191660:five_prime_UTR
TGATCTTCAATCTCAACCAT+TGG 0.558146 8_1:-36365615 None:intergenic
AGATGTAATTCAGAAAGCCT+TGG 0.558336 8_1:+36364789 Msa1191660:CDS
CGATACTTCTTTACAAGGAG+AGG 0.559558 8_1:-36363036 None:intergenic
AAATCTGTGGACGTGCCAAA+GGG 0.563213 8_1:+36361550 Msa1191660:five_prime_UTR
AGCATCGCACTCACAGGCCA+TGG 0.563372 8_1:-36365638 None:intergenic
CATTGAAGCATCGCACTCAC+AGG 0.568292 8_1:-36365644 None:intergenic
CCCCTGCTAACTAATTGTAC+AGG 0.568299 8_1:+36362613 Msa1191660:CDS
GATTGCAGCAGATTTGGAAG+AGG 0.569308 8_1:+36365505 Msa1191660:CDS
CATAGCTCGTGAGATTGATG+AGG 0.572867 8_1:+36362495 Msa1191660:CDS
TATAATATCTCCATTAGCAA+AGG 0.573127 8_1:-36364847 None:intergenic
AATAAATGCTAACAGTACTA+CGG 0.576254 8_1:+36364885 Msa1191660:CDS
AAGAACATTTCTTCTCTGCA+AGG 0.577312 8_1:-36361715 None:intergenic
GTAACCTAGTATCTCTCCTA+GGG 0.580877 8_1:-36361768 None:intergenic
GGCATCATCTTCAAAATCTG+TGG 0.581034 8_1:+36361537 Msa1191660:five_prime_UTR
CTAATGGAGATATTATACAT+TGG 0.587831 8_1:+36364853 Msa1191660:CDS
ACCTAGTATCATCAGATCAA+GGG 0.588343 8_1:+36361516 Msa1191660:five_prime_UTR
AATGCCTCAGGTCAGGCCAA+TGG 0.592426 8_1:+36365599 Msa1191660:CDS
TAGCAATTAGCACCTTGCTA+GGG 0.595589 8_1:+36366020 Msa1191660:three_prime_UTR
TAGTGAGACCACCCATTGGA+TGG 0.596413 8_1:-36361690 None:intergenic
GGAATAGTGAGACCACCCAT+TGG 0.603922 8_1:-36361694 None:intergenic
ATAGCTCGTGAGATTGATGA+GGG 0.611915 8_1:+36362496 Msa1191660:CDS
TCAACCATTGGCCTGACCTG+AGG 0.612095 8_1:-36365603 None:intergenic
GAATATGACCATCCAATGGG+TGG 0.615494 8_1:+36361682 Msa1191660:five_prime_UTR
CCAAAGCAGAAACCAATGCA+TGG 0.621432 8_1:-36365949 None:intergenic
AAGAACTAATAAAGCAACGT+AGG 0.626994 8_1:-36365869 None:intergenic
AGAATTGTTGAGCCAAAGTG+AGG 0.628113 8_1:+36361651 Msa1191660:five_prime_UTR
ACCAACAACCTCTGTAAACA+GGG 0.629542 8_1:-36364959 None:intergenic
GGATGCAGGCATAAAATTCG+GGG 0.630003 8_1:+36365247 Msa1191660:intron
AGAAAGTGACCAAATTTCGA+AGG 0.633181 8_1:+36364744 Msa1191660:CDS
GGATATCTAGCAGTGTATGT+GGG 0.634018 8_1:+36361571 Msa1191660:five_prime_UTR
CGTAAGAGTAGAGAGAGAAG+CGG 0.639894 8_1:+36362041 Msa1191660:five_prime_UTR
CAAGATGAAGTATATACCCC+CGG 0.639997 8_1:-36362758 None:intergenic
TGTGCCATCCCTGTTTACAG+AGG 0.644093 8_1:+36364951 Msa1191660:CDS
ACAACCTCTGTAAACAGGGA+TGG 0.649435 8_1:-36364955 None:intergenic
ACAAAGCAGAAACACAGGTA+GGG 0.650615 8_1:+36362066 Msa1191660:five_prime_UTR
CGGCGACAAAGCAGAAACAC+AGG 0.651202 8_1:+36362061 Msa1191660:five_prime_UTR
CTGACATAGACAATAATCCA+AGG 0.653035 8_1:+36362542 Msa1191660:CDS
CAGTAAACATCACCCTAGCA+AGG 0.653368 8_1:-36366032 None:intergenic
CCTGTACAATTAGTTAGCAG+GGG 0.664701 8_1:-36362613 None:intergenic
GACAAAGCAGAAACACAGGT+AGG 0.670096 8_1:+36362065 Msa1191660:five_prime_UTR
GATGCAGGCATAAAATTCGG+GGG 0.674223 8_1:+36365248 Msa1191660:intron
GGTGAGCCTTAGAGACTGAG+TGG 0.677842 8_1:-36362737 None:intergenic
CTGTACAATTAGTTAGCAGG+GGG 0.693643 8_1:-36362612 None:intergenic
CAGTCTCTAAGGCTCACCGG+GGG 0.728033 8_1:+36362742 Msa1191660:CDS
ATGTGGGCGAGAAAATGAAG+CGG 0.742198 8_1:+36361587 Msa1191660:five_prime_UTR
GTTGAGATTGAAGATCACCA+TGG 0.743567 8_1:+36365621 Msa1191660:exon
TCAGTCTCTAAGGCTCACCG+GGG 0.764800 8_1:+36362741 Msa1191660:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TCTAAAAAAAATTAGTATTA+GGG - chr8_1:36362020-36362039 None:intergenic 10.0%
!! ATCTAAAAAAAATTAGTATT+AGG - chr8_1:36362021-36362040 None:intergenic 10.0%
!! ATATATTAGTAAAATTCAAA+TGG - chr8_1:36363300-36363319 None:intergenic 10.0%
!!! ATTTGAATTTTACTAATATA+TGG + chr8_1:36363299-36363318 Msa1191660:intron 10.0%
!! TTCAACAAAAAAAAAAAAAA+CGG + chr8_1:36364642-36364661 Msa1191660:intron 10.0%
!! ATAAACTTATTACATTAGAA+AGG + chr8_1:36361844-36361863 Msa1191660:five_prime_UTR 15.0%
!! TAAACTTATTACATTAGAAA+GGG + chr8_1:36361845-36361864 Msa1191660:five_prime_UTR 15.0%
!!! TACTTCATTTTAAAACAATT+TGG + chr8_1:36361875-36361894 Msa1191660:five_prime_UTR 15.0%
!!! ATTTATTTTTATTGTCAATC+AGG - chr8_1:36363146-36363165 None:intergenic 15.0%
!! TGATTGACAATAAAAATAAA+TGG + chr8_1:36363145-36363164 Msa1191660:CDS 15.0%
!! ATTTAATTAATTGATGTGTA+TGG + chr8_1:36363269-36363288 Msa1191660:intron 15.0%
!!! ATATTTATTGTTTTTTGCTT+GGG - chr8_1:36363356-36363375 None:intergenic 15.0%
!!! AATATTTATTGTTTTTTGCT+TGG - chr8_1:36363357-36363376 None:intergenic 15.0%
!! AAAACAAATAAAAAGAAGAA+GGG - chr8_1:36363442-36363461 None:intergenic 15.0%
!!! ATATTTTTTATGTGAACTAT+GGG + chr8_1:36363617-36363636 Msa1191660:intron 15.0%
!!! ACTTTAAAGAATATATATGT+TGG + chr8_1:36364187-36364206 Msa1191660:intron 15.0%
!!! CTTTAAAGAATATATATGTT+GGG + chr8_1:36364188-36364207 Msa1191660:intron 15.0%
!! ATTAGATATAAGAAAATCTA+AGG + chr8_1:36364220-36364239 Msa1191660:intron 15.0%
!! TCAACAAAAAAAAAAAAAAC+GGG + chr8_1:36364643-36364662 Msa1191660:intron 15.0%
!! GTCAATAAATAAATGATATA+TGG - chr8_1:36365074-36365093 None:intergenic 15.0%
!!! TATATAGAAGACTCAAATTT+TGG - chr8_1:36361426-36361445 None:intergenic 20.0%
!! ACATATATACATACAACAAT+GGG + chr8_1:36361484-36361503 Msa1191660:five_prime_UTR 20.0%
!!! TTTGTTTTATAATTTGGAGT+GGG - chr8_1:36361983-36362002 None:intergenic 20.0%
!!! ATTTGTTTTATAATTTGGAG+TGG - chr8_1:36361984-36362003 None:intergenic 20.0%
!! AAAAATTAGTATTAGGGTTT+AGG - chr8_1:36362014-36362033 None:intergenic 20.0%
!! AGTGTTTATGTATATTGTAT+TGG + chr8_1:36362140-36362159 Msa1191660:five_prime_UTR 20.0%
!!! TTTTGATTTTGAAAGAAAGA+TGG + chr8_1:36362211-36362230 Msa1191660:exon 20.0%
!! ACAATAAAAATAAATGGCAA+AGG + chr8_1:36363151-36363170 Msa1191660:CDS 20.0%
!!! TGAATTTTACTAATATATGG+TGG + chr8_1:36363302-36363321 Msa1191660:intron 20.0%
!!! TATTTATTGTTTTTTGCTTG+GGG - chr8_1:36363355-36363374 None:intergenic 20.0%
!! AAACAAATAAAAAGAAGAAG+GGG - chr8_1:36363441-36363460 None:intergenic 20.0%
!! CAAAACAAATAAAAAGAAGA+AGG - chr8_1:36363443-36363462 None:intergenic 20.0%
!! CAAAACAACATAACAAATTA+TGG + chr8_1:36363582-36363601 Msa1191660:intron 20.0%
!!! GATATTTTTTATGTGAACTA+TGG + chr8_1:36363616-36363635 Msa1191660:intron 20.0%
!!! TATTGATTTGAGTAACTAAA+TGG - chr8_1:36363866-36363885 None:intergenic 20.0%
!! ATAAAATTAGTATGAGATCA+AGG - chr8_1:36364045-36364064 None:intergenic 20.0%
!!! TTAAGTTATGATTTTCCTAA+AGG + chr8_1:36364150-36364169 Msa1191660:intron 20.0%
!!! AGATGTTTTTAATATCCTTA+CGG + chr8_1:36364326-36364345 Msa1191660:intron 20.0%
!!! GTTAATTATTCCTATTTCTA+AGG - chr8_1:36364434-36364453 None:intergenic 20.0%
!! AAATAGGAATAATTAACTAC+AGG + chr8_1:36364437-36364456 Msa1191660:intron 20.0%
!! TTTGTTGAATAACAAAACAT+GGG - chr8_1:36364631-36364650 None:intergenic 20.0%
!!! TTTTGTTGAATAACAAAACA+TGG - chr8_1:36364632-36364651 None:intergenic 20.0%
!! TTAACAAGCAAAAAATTTGA+GGG - chr8_1:36364676-36364695 None:intergenic 20.0%
!! ATTAACAAGCAAAAAATTTG+AGG - chr8_1:36364677-36364696 None:intergenic 20.0%
!! ATATCATTTATTTATTGACC+TGG + chr8_1:36365075-36365094 Msa1191660:intron 20.0%
!! TATCATTTATTTATTGACCT+GGG + chr8_1:36365076-36365095 Msa1191660:intron 20.0%
!!! ATTATTTATTTAATGGATGC+AGG + chr8_1:36365233-36365252 Msa1191660:intron 20.0%
! AGAAGAGATTGATCTAAAAA+GGG - chr8_1:36361457-36361476 None:intergenic 25.0%
! AAGAAGAGATTGATCTAAAA+AGG - chr8_1:36361458-36361477 None:intergenic 25.0%
! CACATATATACATACAACAA+TGG + chr8_1:36361483-36361502 Msa1191660:five_prime_UTR 25.0%
!! TTTGGTTCAAGTATGATATT+GGG - chr8_1:36361621-36361640 None:intergenic 25.0%
! ATTCAAAAATTTCCTCACTT+TGG - chr8_1:36361666-36361685 None:intergenic 25.0%
!!! TCAGAACATTTTTTGAAGAA+AGG + chr8_1:36361898-36361917 Msa1191660:five_prime_UTR 25.0%
!!! AACATTTTTTGAAGAAAGGA+GGG + chr8_1:36361902-36361921 Msa1191660:five_prime_UTR 25.0%
! GTTTATGTATATTGTATTGG+TGG + chr8_1:36362143-36362162 Msa1191660:five_prime_UTR 25.0%
!! TAATCGAATTCGGAAAATTT+TGG + chr8_1:36362256-36362275 Msa1191660:CDS 25.0%
! TTGAAGTTGGAGAATATAAA+TGG + chr8_1:36362381-36362400 Msa1191660:CDS 25.0%
! AAATATTGATATGCCAATAC+AGG + chr8_1:36362467-36362486 Msa1191660:intron 25.0%
! GGTCAATATAGTTAGTAATA+TGG - chr8_1:36362932-36362951 None:intergenic 25.0%
! TGACCAATAATTATAAGCAT+TGG + chr8_1:36362947-36362966 Msa1191660:intron 25.0%
! GACCAATAATTATAAGCATT+GGG + chr8_1:36362948-36362967 Msa1191660:intron 25.0%
!!! ATTTATTGTTTTTTGCTTGG+GGG - chr8_1:36363354-36363373 None:intergenic 25.0%
! AACAAATAAAAAGAAGAAGG+GGG - chr8_1:36363440-36363459 None:intergenic 25.0%
!!! ATTTTGATCTGTTTGAAATC+AGG - chr8_1:36363554-36363573 None:intergenic 25.0%
! AACAACATAACAAATTATGG+TGG + chr8_1:36363585-36363604 Msa1191660:intron 25.0%
! TAACATTGCAGTAGTTATAA+GGG - chr8_1:36363650-36363669 None:intergenic 25.0%
! TTAACATTGCAGTAGTTATA+AGG - chr8_1:36363651-36363670 None:intergenic 25.0%
! TGTGTAATCTTACTATTAGA+CGG + chr8_1:36364015-36364034 Msa1191660:intron 25.0%
! ACATGTAAGAGTAAAACATA+AGG + chr8_1:36364270-36364289 Msa1191660:intron 25.0%
! CATGTAAGAGTAAAACATAA+GGG + chr8_1:36364271-36364290 Msa1191660:intron 25.0%
! AAATGTTGTACAAACTTTGT+AGG + chr8_1:36364500-36364519 Msa1191660:intron 25.0%
! TATAATATCTCCATTAGCAA+AGG - chr8_1:36364850-36364869 None:intergenic 25.0%
! CTAATGGAGATATTATACAT+TGG + chr8_1:36364853-36364872 Msa1191660:CDS 25.0%
! AATAAATGCTAACAGTACTA+CGG + chr8_1:36364885-36364904 Msa1191660:CDS 25.0%
! ACACATTTATCATTTCTCTT+TGG - chr8_1:36365373-36365392 None:intergenic 25.0%
!!! TGATTTTGGCTGTAAATAAA+TGG + chr8_1:36365419-36365438 Msa1191660:intron 25.0%
!!! GATTTTGGCTGTAAATAAAT+GGG + chr8_1:36365420-36365439 Msa1191660:intron 25.0%
!!! GTTTAGTTCTGTTTATTTTG+TGG + chr8_1:36365780-36365799 Msa1191660:intron 25.0%
! ATAATCTCAAGAAAACTGTA+AGG - chr8_1:36365919-36365938 None:intergenic 25.0%
! GTTTGGTTCAAGTATGATAT+TGG - chr8_1:36361622-36361641 None:intergenic 30.0%
! TTTTGAATATGACCATCCAA+TGG + chr8_1:36361678-36361697 Msa1191660:five_prime_UTR 30.0%
TTTGAATATGACCATCCAAT+GGG + chr8_1:36361679-36361698 Msa1191660:five_prime_UTR 30.0%
CTAATAACCTTATGCACTAT+TGG + chr8_1:36361799-36361818 Msa1191660:five_prime_UTR 30.0%
!!! GAACATTTTTTGAAGAAAGG+AGG + chr8_1:36361901-36361920 Msa1191660:five_prime_UTR 30.0%
!! TGATTTTGAAAGAAAGATGG+AGG + chr8_1:36362214-36362233 Msa1191660:exon 30.0%
TTCGTAATCGTAATCGAATT+CGG + chr8_1:36362246-36362265 Msa1191660:CDS 30.0%
! AGTGCATAAATTTTCAACCT+TGG - chr8_1:36362562-36362581 None:intergenic 30.0%
CTACTTGAACATTATCCTTA+GGG - chr8_1:36362812-36362831 None:intergenic 30.0%
TCTACTTGAACATTATCCTT+AGG - chr8_1:36362813-36362832 None:intergenic 30.0%
AATTGCAGATTCAGATGTTT+GGG + chr8_1:36362832-36362851 Msa1191660:CDS 30.0%
CACCCAATGCTTATAATTAT+TGG - chr8_1:36362953-36362972 None:intergenic 30.0%
!!! TTTATTGTTTTTTGCTTGGG+GGG - chr8_1:36363353-36363372 None:intergenic 30.0%
TTAGCATGTCTTAGTTGATT+CGG + chr8_1:36363399-36363418 Msa1191660:intron 30.0%
!!! TTGTTTTTGAAGCAATGTCT+TGG + chr8_1:36363460-36363479 Msa1191660:intron 30.0%
ACTACTGCAATGTTAAACAA+TGG + chr8_1:36363655-36363674 Msa1191660:intron 30.0%
! TAATAATCTCCTTGCTGTAA+TGG + chr8_1:36363684-36363703 Msa1191660:intron 30.0%
TTGTAAATTCCATTACAGCA+AGG - chr8_1:36363696-36363715 None:intergenic 30.0%
AAAGAAGGGAAAATGTGAAA+CGG - chr8_1:36363920-36363939 None:intergenic 30.0%
TATAAGAGAAGGGGTAAAAT+GGG - chr8_1:36363956-36363975 None:intergenic 30.0%
ACATATGTGTATAAGAGAAG+GGG - chr8_1:36363965-36363984 None:intergenic 30.0%
GACATATGTGTATAAGAGAA+GGG - chr8_1:36363966-36363985 None:intergenic 30.0%
TGACATATGTGTATAAGAGA+AGG - chr8_1:36363967-36363986 None:intergenic 30.0%
TCTCTTATACACATATGTCA+AGG + chr8_1:36363967-36363986 Msa1191660:intron 30.0%
GTTCATAAGTATGTAGTCAT+AGG + chr8_1:36364102-36364121 Msa1191660:intron 30.0%
TTACTCTTACATGTACATCA+TGG - chr8_1:36364264-36364283 None:intergenic 30.0%
!! AGTGGACTCATTTTATTTAG+TGG - chr8_1:36364363-36364382 None:intergenic 30.0%
!!! ACAATTCACGTTTTAGTTAG+TGG - chr8_1:36364381-36364400 None:intergenic 30.0%
ACTAACTAAAACGTGAATTG+TGG + chr8_1:36364380-36364399 Msa1191660:intron 30.0%
GGAATAATTAACTACAGGAT+AGG + chr8_1:36364442-36364461 Msa1191660:intron 30.0%
TACAAAAAAGTGATTCACCA+AGG - chr8_1:36364809-36364828 None:intergenic 30.0%
!!! GTGAATCACTTTTTTGTAGA+TGG + chr8_1:36364811-36364830 Msa1191660:CDS 30.0%
TTGTCAAAATTGAGGAAGAT+AGG + chr8_1:36364914-36364933 Msa1191660:CDS 30.0%
AAAATTGAGGAAGATAGGTT+TGG + chr8_1:36364919-36364938 Msa1191660:CDS 30.0%
AAATTGAGGAAGATAGGTTT+GGG + chr8_1:36364920-36364939 Msa1191660:CDS 30.0%
AATATAAAGAAACAAGACCC+AGG - chr8_1:36365096-36365115 None:intergenic 30.0%
! TCATTTCTCTTTGGTGTAAT+TGG - chr8_1:36365364-36365383 None:intergenic 30.0%
TGATAAATGTGTAGAAGAGA+TGG + chr8_1:36365381-36365400 Msa1191660:CDS 30.0%
TACTTGATAGAAACTGTTTG+TGG + chr8_1:36365462-36365481 Msa1191660:intron 30.0%
!! AATGACTTGGTTATAAATGC+TGG + chr8_1:36365563-36365582 Msa1191660:CDS 30.0%
AAGAACTAATAAAGCAACGT+AGG - chr8_1:36365872-36365891 None:intergenic 30.0%
! CAGTTTTCTTGAGATTATCT+TGG + chr8_1:36365921-36365940 Msa1191660:three_prime_UTR 30.0%
TACCTAGTATCATCAGATCA+AGG + chr8_1:36361515-36361534 Msa1191660:five_prime_UTR 35.0%
ACCTAGTATCATCAGATCAA+GGG + chr8_1:36361516-36361535 Msa1191660:five_prime_UTR 35.0%
ACAATTCTTGGAATGAGGTT+TGG - chr8_1:36361639-36361658 None:intergenic 35.0%
AAGAACATTTCTTCTCTGCA+AGG - chr8_1:36361718-36361737 None:intergenic 35.0%
GTTTGAATTGAATTTGCCCT+AGG + chr8_1:36361752-36361771 Msa1191660:five_prime_UTR 35.0%
CTCAATACCAATAGTGCATA+AGG - chr8_1:36361809-36361828 None:intergenic 35.0%
! TTGTATTGGTGGTATGAGAT+AGG + chr8_1:36362154-36362173 Msa1191660:five_prime_UTR 35.0%
! TGTATTGGTGGTATGAGATA+GGG + chr8_1:36362155-36362174 Msa1191660:five_prime_UTR 35.0%
!!! AGATAGGGTTTTGTTTCAAC+AGG + chr8_1:36362170-36362189 Msa1191660:five_prime_UTR 35.0%
TCCAAAGTTGTTGAAGAAGA+TGG + chr8_1:36362281-36362300 Msa1191660:CDS 35.0%
ACCATCTTCTTCAACAACTT+TGG - chr8_1:36362285-36362304 None:intergenic 35.0%
!! GATTCTAGAGTCATTGAAGT+TGG + chr8_1:36362368-36362387 Msa1191660:CDS 35.0%
CTGACATAGACAATAATCCA+AGG + chr8_1:36362542-36362561 Msa1191660:CDS 35.0%
ACCTGTACAATTAGTTAGCA+GGG - chr8_1:36362617-36362636 None:intergenic 35.0%
TACCTGTACAATTAGTTAGC+AGG - chr8_1:36362618-36362637 None:intergenic 35.0%
TGCTAACTAATTGTACAGGT+AGG + chr8_1:36362617-36362636 Msa1191660:intron 35.0%
GAATTGCAGATTCAGATGTT+TGG + chr8_1:36362831-36362850 Msa1191660:CDS 35.0%
CAATCTCATTCTACTGTTGT+TGG + chr8_1:36362883-36362902 Msa1191660:intron 35.0%
CAATCATACAATGAGTTGCA+TGG - chr8_1:36362986-36363005 None:intergenic 35.0%
CATCAGATTCGAATGAAAGA+GGG - chr8_1:36363517-36363536 None:intergenic 35.0%
TCATCAGATTCGAATGAAAG+AGG - chr8_1:36363518-36363537 None:intergenic 35.0%
CTGCAATGTTAAACAATGGA+TGG + chr8_1:36363659-36363678 Msa1191660:intron 35.0%
! ATGTGAAACGGTTAGTCAAT+GGG - chr8_1:36363908-36363927 None:intergenic 35.0%
! AATGTGAAACGGTTAGTCAA+TGG - chr8_1:36363909-36363928 None:intergenic 35.0%
GTATAAGAGAAGGGGTAAAA+TGG - chr8_1:36363957-36363976 None:intergenic 35.0%
TTACACTACACAAGTTCACT+AGG - chr8_1:36364072-36364091 None:intergenic 35.0%
!! CACACAATTCGTCATTTTCT+AGG - chr8_1:36364129-36364148 None:intergenic 35.0%
TTTCCTAAAGGACTGAAACT+TGG + chr8_1:36364162-36364181 Msa1191660:intron 35.0%
TTACCAAGTTTCAGTCCTTT+AGG - chr8_1:36364168-36364187 None:intergenic 35.0%
ACTAAAACGTGAATTGTGGA+AGG + chr8_1:36364384-36364403 Msa1191660:intron 35.0%
!! TATTTCTAAGGAAGTGCTAG+TGG - chr8_1:36364422-36364441 None:intergenic 35.0%
ACTAGCACTTCCTTAGAAAT+AGG + chr8_1:36364421-36364440 Msa1191660:intron 35.0%
AGAAAGTGACCAAATTTCGA+AGG + chr8_1:36364744-36364763 Msa1191660:CDS 35.0%
ACATTTGGTCCTTCGAAATT+TGG - chr8_1:36364756-36364775 None:intergenic 35.0%
! TTTCGAAGGACCAAATGTTT+TGG + chr8_1:36364758-36364777 Msa1191660:CDS 35.0%
! TTCGAAGGACCAAATGTTTT+GGG + chr8_1:36364759-36364778 Msa1191660:CDS 35.0%
CTTGTTCTTCCCAAAACATT+TGG - chr8_1:36364771-36364790 None:intergenic 35.0%
AGATGTAATTCAGAAAGCCT+TGG + chr8_1:36364789-36364808 Msa1191660:CDS 35.0%
GGCTAAGTTTGTCAAAATTG+AGG + chr8_1:36364906-36364925 Msa1191660:CDS 35.0%
CTGAGAATGCTTTCAGATAT+AGG - chr8_1:36364997-36365016 None:intergenic 35.0%
!!! AGAGTTTTGTTGCATGATAG+TGG + chr8_1:36365017-36365036 Msa1191660:CDS 35.0%
TGGAAATGTTTGTTCTTGAC+TGG + chr8_1:36365037-36365056 Msa1191660:CDS 35.0%
TTGTTCTTGACTGGATATTC+AGG + chr8_1:36365046-36365065 Msa1191660:CDS 35.0%
ATGGATGCAGGCATAAAATT+CGG + chr8_1:36365245-36365264 Msa1191660:intron 35.0%
CAGGAGAAAGGTGAAAAAAA+CGG + chr8_1:36365312-36365331 Msa1191660:CDS 35.0%
AGGAGAAAGGTGAAAAAAAC+GGG + chr8_1:36365313-36365332 Msa1191660:CDS 35.0%
! GCAAACGGTAAACTTGATTT+TGG + chr8_1:36365405-36365424 Msa1191660:intron 35.0%
TGATCTTCAATCTCAACCAT+TGG - chr8_1:36365618-36365637 None:intergenic 35.0%
GGCATCATCTTCAAAATCTG+TGG + chr8_1:36361537-36361556 Msa1191660:five_prime_UTR 40.0%
TACACTGCTAGATATCCCTT+TGG - chr8_1:36361568-36361587 None:intergenic 40.0%
GGATATCTAGCAGTGTATGT+GGG + chr8_1:36361571-36361590 Msa1191660:five_prime_UTR 40.0%
GCTCAACAATTCTTGGAATG+AGG - chr8_1:36361644-36361663 None:intergenic 40.0%
! CACTTTGGCTCAACAATTCT+TGG - chr8_1:36361651-36361670 None:intergenic 40.0%
AGAATTGTTGAGCCAAAGTG+AGG + chr8_1:36361651-36361670 Msa1191660:five_prime_UTR 40.0%
GTAACCTAGTATCTCTCCTA+GGG - chr8_1:36361771-36361790 None:intergenic 40.0%
TGTAACCTAGTATCTCTCCT+AGG - chr8_1:36361772-36361791 None:intergenic 40.0%
ACAAAGCAGAAACACAGGTA+GGG + chr8_1:36362066-36362085 Msa1191660:five_prime_UTR 40.0%
AATCCTCATATCGAGCAATC+GGG - chr8_1:36362352-36362371 None:intergenic 40.0%
GAATCCTCATATCGAGCAAT+CGG - chr8_1:36362353-36362372 None:intergenic 40.0%
GAGCTATGAAAGTCCTGTAT+TGG - chr8_1:36362483-36362502 None:intergenic 40.0%
ATAGCTCGTGAGATTGATGA+GGG + chr8_1:36362496-36362515 Msa1191660:CDS 40.0%
CTGTACAATTAGTTAGCAGG+GGG - chr8_1:36362615-36362634 None:intergenic 40.0%
CCTGTACAATTAGTTAGCAG+GGG - chr8_1:36362616-36362635 None:intergenic 40.0%
CAAGATGAAGTATATACCCC+CGG - chr8_1:36362761-36362780 None:intergenic 40.0%
GTCAAGAAAACCTTCTTCAC+GGG - chr8_1:36362790-36362809 None:intergenic 40.0%
GGTCAAGAAAACCTTCTTCA+CGG - chr8_1:36362791-36362810 None:intergenic 40.0%
! AGAAGGTTTTCTTGACCCTA+AGG + chr8_1:36362794-36362813 Msa1191660:CDS 40.0%
CGATACTTCTTTACAAGGAG+AGG - chr8_1:36363039-36363058 None:intergenic 40.0%
CAGCTCGATACTTCTTTACA+AGG - chr8_1:36363044-36363063 None:intergenic 40.0%
AATCTGATGATATGCCCTGA+TGG + chr8_1:36363528-36363547 Msa1191660:intron 40.0%
! TGTTTGAAATCAGGCCATCA+GGG - chr8_1:36363545-36363564 None:intergenic 40.0%
AGAACCATTCTCATCTCAGA+GGG - chr8_1:36363748-36363767 None:intergenic 40.0%
!!! GAAGAAGAGCATACTGGTTT+TGG - chr8_1:36363796-36363815 None:intergenic 40.0%
GAGGAAAAGATTGACCGAAA+GGG - chr8_1:36363822-36363841 None:intergenic 40.0%
TGAGTAACTAAATGGACACG+TGG - chr8_1:36363858-36363877 None:intergenic 40.0%
GAAGCAAAGAGGAGAAAGAA+GGG - chr8_1:36363934-36363953 None:intergenic 40.0%
ATATGTCAAGGATACTTCCC+AGG + chr8_1:36363979-36363998 Msa1191660:intron 40.0%
TATGTCAAGGATACTTCCCA+GGG + chr8_1:36363980-36363999 Msa1191660:intron 40.0%
CACACAATTTGATATGCCCT+GGG - chr8_1:36363999-36364018 None:intergenic 40.0%
ACACACAATTTGATATGCCC+TGG - chr8_1:36364000-36364019 None:intergenic 40.0%
CACTTTCTTCCACGAAAGTA+CGG - chr8_1:36364732-36364751 None:intergenic 40.0%
TGTGACATCTCCTTTGCTAA+TGG + chr8_1:36364837-36364856 Msa1191660:CDS 40.0%
ACCAACAACCTCTGTAAACA+GGG - chr8_1:36364962-36364981 None:intergenic 40.0%
TACCAACAACCTCTGTAAAC+AGG - chr8_1:36364963-36364982 None:intergenic 40.0%
! TGTGATGCAATAGTGTTGCT+AGG + chr8_1:36365164-36365183 Msa1191660:intron 40.0%
!! CAATAGTGTTGCTAGGCTTT+TGG + chr8_1:36365171-36365190 Msa1191660:intron 40.0%
TGGATGCAGGCATAAAATTC+GGG + chr8_1:36365246-36365265 Msa1191660:intron 40.0%
ATCGAACTGAAAAGAAGTCC+AGG + chr8_1:36365293-36365312 Msa1191660:CDS 40.0%
TGAAAAGAAGTCCAGGAGAA+AGG + chr8_1:36365300-36365319 Msa1191660:CDS 40.0%
!!! CGTTTTTTTCACCTTTCTCC+TGG - chr8_1:36365314-36365333 None:intergenic 40.0%
TGTAGAAGAGATGGAGCAAA+CGG + chr8_1:36365390-36365409 Msa1191660:CDS 40.0%
TGAATCGATTGCAGCAGATT+TGG + chr8_1:36365499-36365518 Msa1191660:CDS 40.0%
GAGAGCTGATCTTAATGACT+TGG + chr8_1:36365550-36365569 Msa1191660:CDS 40.0%
ATTGAAGATCACAATGCCTC+AGG + chr8_1:36365587-36365606 Msa1191660:CDS 40.0%
GTTGAGATTGAAGATCACCA+TGG + chr8_1:36365621-36365640 Msa1191660:exon 40.0%
!! ATCTTGGTGTTTCCATGCAT+TGG + chr8_1:36365937-36365956 Msa1191660:three_prime_UTR 40.0%
GAGCACATTGTCATTCTTGT+TGG + chr8_1:36365985-36366004 Msa1191660:three_prime_UTR 40.0%
TAGCAATTAGCACCTTGCTA+GGG + chr8_1:36366020-36366039 Msa1191660:three_prime_UTR 40.0%
GCCCTTGATCTGATGATACT+AGG - chr8_1:36361520-36361539 None:intergenic 45.0%
AAAATCTGTGGACGTGCCAA+AGG + chr8_1:36361549-36361568 Msa1191660:five_prime_UTR 45.0%
AAATCTGTGGACGTGCCAAA+GGG + chr8_1:36361550-36361569 Msa1191660:five_prime_UTR 45.0%
GGGATATCTAGCAGTGTATG+TGG + chr8_1:36361570-36361589 Msa1191660:five_prime_UTR 45.0%
ATGTGGGCGAGAAAATGAAG+CGG + chr8_1:36361587-36361606 Msa1191660:five_prime_UTR 45.0%
GAATATGACCATCCAATGGG+TGG + chr8_1:36361682-36361701 Msa1191660:five_prime_UTR 45.0%
TTTGCCCTAGGAGAGATACT+AGG + chr8_1:36361764-36361783 Msa1191660:five_prime_UTR 45.0%
CGTAAGAGTAGAGAGAGAAG+CGG + chr8_1:36362041-36362060 Msa1191660:five_prime_UTR 45.0%
GACAAAGCAGAAACACAGGT+AGG + chr8_1:36362065-36362084 Msa1191660:five_prime_UTR 45.0%
TGAAAGAAAGATGGAGGCGA+AGG + chr8_1:36362220-36362239 Msa1191660:exon 45.0%
AAACCCGATTGCTCGATATG+AGG + chr8_1:36362346-36362365 Msa1191660:CDS 45.0%
CATAGCTCGTGAGATTGATG+AGG + chr8_1:36362495-36362514 Msa1191660:CDS 45.0%
CCCCTGCTAACTAATTGTAC+AGG + chr8_1:36362613-36362632 Msa1191660:CDS 45.0%
TCGATTCCACTCAGTCTCTA+AGG + chr8_1:36362731-36362750 Msa1191660:CDS 45.0%
ACTTCTTTACAAGGAGAGGC+TGG - chr8_1:36363035-36363054 None:intergenic 45.0%
! CTGTTTGAAATCAGGCCATC+AGG - chr8_1:36363546-36363565 None:intergenic 45.0%
AACCATTCTCATCTCAGAGG+GGG - chr8_1:36363746-36363765 None:intergenic 45.0%
GAACCATTCTCATCTCAGAG+GGG - chr8_1:36363747-36363766 None:intergenic 45.0%
GAGAACCATTCTCATCTCAG+AGG - chr8_1:36363749-36363768 None:intergenic 45.0%
!!! CTGGTTTTGGAGATGGAAGT+GGG - chr8_1:36363783-36363802 None:intergenic 45.0%
!!! ACTGGTTTTGGAGATGGAAG+TGG - chr8_1:36363784-36363803 None:intergenic 45.0%
!!! GAGCATACTGGTTTTGGAGA+TGG - chr8_1:36363790-36363809 None:intergenic 45.0%
TGCTCTTCTTCACACCCTTT+CGG + chr8_1:36363805-36363824 Msa1191660:intron 45.0%
GGAGGAAAAGATTGACCGAA+AGG - chr8_1:36363823-36363842 None:intergenic 45.0%
! GGTTAGTCAATGGGAGCAAA+AGG - chr8_1:36363899-36363918 None:intergenic 45.0%
GGAAGCAAAGAGGAGAAAGA+AGG - chr8_1:36363935-36363954 None:intergenic 45.0%
GGGTAAAATGGGAAGCAAAG+AGG - chr8_1:36363945-36363964 None:intergenic 45.0%
! GTGGTTTTCATCTCTCCGTA+AGG - chr8_1:36364344-36364363 None:intergenic 45.0%
TTGCAGTTTCCGTACTTTCG+TGG + chr8_1:36364720-36364739 Msa1191660:intron 45.0%
TGAGGAAGATAGGTTTGGGT+TGG + chr8_1:36364924-36364943 Msa1191660:CDS 45.0%
!! GAAGATAGGTTTGGGTTGGT+CGG + chr8_1:36364928-36364947 Msa1191660:CDS 45.0%
ACAACCTCTGTAAACAGGGA+TGG - chr8_1:36364958-36364977 None:intergenic 45.0%
TCCCTGTTTACAGAGGTTGT+TGG + chr8_1:36364958-36364977 Msa1191660:CDS 45.0%
AGAATATGATCAGCCTGCAC+AGG - chr8_1:36365212-36365231 None:intergenic 45.0%
GGATGCAGGCATAAAATTCG+GGG + chr8_1:36365247-36365266 Msa1191660:intron 45.0%
GATGCAGGCATAAAATTCGG+GGG + chr8_1:36365248-36365267 Msa1191660:intron 45.0%
GATTGCAGCAGATTTGGAAG+AGG + chr8_1:36365505-36365524 Msa1191660:CDS 45.0%
GGAAGAGGATTTGTCTGTTC+TGG + chr8_1:36365520-36365539 Msa1191660:CDS 45.0%
CCAAAGCAGAAACCAATGCA+TGG - chr8_1:36365952-36365971 None:intergenic 45.0%
!! CCATGCATTGGTTTCTGCTT+TGG + chr8_1:36365949-36365968 Msa1191660:three_prime_UTR 45.0%
GGTGCTAATTGCTAGCAAGT+TGG - chr8_1:36366014-36366033 None:intergenic 45.0%
CTAGCAATTAGCACCTTGCT+AGG + chr8_1:36366019-36366038 Msa1191660:three_prime_UTR 45.0%
CAGTAAACATCACCCTAGCA+AGG - chr8_1:36366035-36366054 None:intergenic 45.0%
!!! AATTTATTTGTTTTATAATT+TGG - chr8_1:36361989-36362008 None:intergenic 5.0%
!! TATTCTAATTATTTATTTAA+TGG + chr8_1:36365226-36365245 Msa1191660:intron 5.0%
TAGTGAGACCACCCATTGGA+TGG - chr8_1:36361693-36361712 None:intergenic 50.0%
GGAATAGTGAGACCACCCAT+TGG - chr8_1:36361697-36361716 None:intergenic 50.0%
!! ACTCAGTCTCTAAGGCTCAC+CGG + chr8_1:36362739-36362758 Msa1191660:CDS 50.0%
ACCATTCTCATCTCAGAGGG+GGG - chr8_1:36363745-36363764 None:intergenic 50.0%
TTTGGAGATGGAAGTGGGAC+TGG - chr8_1:36363778-36363797 None:intergenic 50.0%
! GGGTGTGAAGAAGAGCATAC+TGG - chr8_1:36363802-36363821 None:intergenic 50.0%
TAAATGGACACGTGGCAGCA+GGG - chr8_1:36363850-36363869 None:intergenic 50.0%
TGTGCCATCCCTGTTTACAG+AGG + chr8_1:36364951-36364970 Msa1191660:CDS 50.0%
TGATATCCAGTAGCCTGTGC+AGG + chr8_1:36365196-36365215 Msa1191660:intron 50.0%
AGATCACAATGCCTCAGGTC+AGG + chr8_1:36365592-36365611 Msa1191660:CDS 50.0%
!! CATTGAAGCATCGCACTCAC+AGG - chr8_1:36365647-36365666 None:intergenic 50.0%
CGGCGACAAAGCAGAAACAC+AGG + chr8_1:36362061-36362080 Msa1191660:five_prime_UTR 55.0%
TAGTTAGCAGGGGGTCACTG+TGG - chr8_1:36362606-36362625 None:intergenic 55.0%
GGTGAGCCTTAGAGACTGAG+TGG - chr8_1:36362740-36362759 None:intergenic 55.0%
!! CTCAGTCTCTAAGGCTCACC+GGG + chr8_1:36362740-36362759 Msa1191660:CDS 55.0%
!! TCAGTCTCTAAGGCTCACCG+GGG + chr8_1:36362741-36362760 Msa1191660:CDS 55.0%
TCTCAGAGGGGGGATTCTCT+TGG - chr8_1:36363735-36363754 None:intergenic 55.0%
!! TCCCCCCTCTGAGATGAGAA+TGG + chr8_1:36363741-36363760 Msa1191660:intron 55.0%
AAATGGACACGTGGCAGCAG+GGG - chr8_1:36363849-36363868 None:intergenic 55.0%
CTAAATGGACACGTGGCAGC+AGG - chr8_1:36363851-36363870 None:intergenic 55.0%
AATGCCTCAGGTCAGGCCAA+TGG + chr8_1:36365599-36365618 Msa1191660:CDS 55.0%
! TCAACCATTGGCCTGACCTG+AGG - chr8_1:36365606-36365625 None:intergenic 55.0%
!! CAGTCTCTAAGGCTCACCGG+GGG + chr8_1:36362742-36362761 Msa1191660:CDS 60.0%
CTTGAGCGTGCCCGTGAAGA+AGG + chr8_1:36362777-36362796 Msa1191660:CDS 60.0%
GATCAGCCTGCACAGGCTAC+TGG - chr8_1:36365205-36365224 None:intergenic 60.0%
AGCATCGCACTCACAGGCCA+TGG - chr8_1:36365641-36365660 None:intergenic 60.0%
ACGTGGCAGCAGGGGAATGG+AGG - chr8_1:36363841-36363860 None:intergenic 65.0%
GACACGTGGCAGCAGGGGAA+TGG - chr8_1:36363844-36363863 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 36361409 36366059 36361409 ID=Msa1191660;Name=Msa1191660
chr8_1 mRNA 36361409 36366059 36361409 ID=Msa1191660-mRNA-1;Parent=Msa1191660;Name=Msa1191660-mRNA-1;_AED=0.05;_eAED=0.05;_QI=821|1|1|1|0.85|0.75|8|335|409
chr8_1 exon 36361409 36362402 36361409 ID=Msa1191660-mRNA-1:exon:11970;Parent=Msa1191660-mRNA-1
chr8_1 exon 36362489 36362634 36362489 ID=Msa1191660-mRNA-1:exon:11971;Parent=Msa1191660-mRNA-1
chr8_1 exon 36362730 36362853 36362730 ID=Msa1191660-mRNA-1:exon:11972;Parent=Msa1191660-mRNA-1
chr8_1 exon 36363020 36363172 36363020 ID=Msa1191660-mRNA-1:exon:11973;Parent=Msa1191660-mRNA-1
chr8_1 exon 36364726 36365067 36364726 ID=Msa1191660-mRNA-1:exon:11974;Parent=Msa1191660-mRNA-1
chr8_1 exon 36365255 36365411 36365255 ID=Msa1191660-mRNA-1:exon:11975;Parent=Msa1191660-mRNA-1
chr8_1 exon 36365491 36365703 36365491 ID=Msa1191660-mRNA-1:exon:11976;Parent=Msa1191660-mRNA-1
chr8_1 exon 36365803 36366059 36365803 ID=Msa1191660-mRNA-1:exon:11977;Parent=Msa1191660-mRNA-1
chr8_1 five_prime_UTR 36361409 36362229 36361409 ID=Msa1191660-mRNA-1:five_prime_utr;Parent=Msa1191660-mRNA-1
chr8_1 CDS 36362230 36362402 36362230 ID=Msa1191660-mRNA-1:cds;Parent=Msa1191660-mRNA-1
chr8_1 CDS 36362489 36362634 36362489 ID=Msa1191660-mRNA-1:cds;Parent=Msa1191660-mRNA-1
chr8_1 CDS 36362730 36362853 36362730 ID=Msa1191660-mRNA-1:cds;Parent=Msa1191660-mRNA-1
chr8_1 CDS 36363020 36363172 36363020 ID=Msa1191660-mRNA-1:cds;Parent=Msa1191660-mRNA-1
chr8_1 CDS 36364726 36365067 36364726 ID=Msa1191660-mRNA-1:cds;Parent=Msa1191660-mRNA-1
chr8_1 CDS 36365255 36365411 36365255 ID=Msa1191660-mRNA-1:cds;Parent=Msa1191660-mRNA-1
chr8_1 CDS 36365491 36365625 36365491 ID=Msa1191660-mRNA-1:cds;Parent=Msa1191660-mRNA-1
chr8_1 three_prime_UTR 36365626 36365703 36365626 ID=Msa1191660-mRNA-1:three_prime_utr;Parent=Msa1191660-mRNA-1
chr8_1 three_prime_UTR 36365803 36366059 36365803 ID=Msa1191660-mRNA-1:three_prime_utr;Parent=Msa1191660-mRNA-1
Gene Sequence

>Msa1191660

ATGGAGGCGAAGGATATTCGTAATCGTAATCGAATTCGGAAAATTTTGGAATCCAAAGTTGTTGAAGAAGATGGTTGTGATGCGTCAAAACTATATATAAAAAAATTGTTTAGACTAAACCCGATTGCTCGATATGAGGATTCTAGAGTCATTGAAGTTGGAGAATATAAATGGACTTTCATAGCTCGTGAGATTGATGAGGGAACGTTGCAATTTGAGTTACTTGCTGACATAGACAATAATCCAAGGTTGAAAATTTATGCACTGATCACAATAGCGATAATTCACCACAGTGACCCCCTGCTAACTAATTGTACAGATCGATTCCACTCAGTCTCTAAGGCTCACCGGGGGTATATACTTCATCTTGAGCGTGCCCGTGAAGAAGGTTTTCTTGACCCTAAGGATAATGTTCAAGTAGAATTGCAGATTCAGATGTTTGGAAAAAATGTCTTCCAGCCTCTCCTTGTAAAGAAGTATCGAGCTGAGCTTCTTTTGACTAAAATGCATTTTGTGAACATGATTTGTTCTAGTTTTTTTAAGAAGACAGTAGATAACTTGAAGAGCCTGATTGACAATAAAAATAAATGGCAAAGTTTCCGTACTTTCGTGGAAGAAAGTGACCAAATTTCGAAGGACCAAATGTTTTGGGAAGAACAAGATGTAATTCAGAAAGCCTTGGTGAATCACTTTTTTGTAGATGGTATTGTGACATCTCCTTTGCTAATGGAGATATTATACATTGGTTATACATCAATAAATGCTAACAGTACTACGGCTAAGTTTGTCAAAATTGAGGAAGATAGGTTTGGGTTGGTCGGTGTGCCATCCCTGTTTACAGAGGTTGTTGGTAGAGAGTATAAACCTATATCTGAAAGCATTCTCAGAGAGTTTTGTTGCATGATAGTGGAAATGTTTGTTCTTGACTGGATATTCAGGCATAAAATTCGGGGGAACTTTACTCAAAGTGAGCTCAATCGAACTGAAAAGAAGTCCAGGAGAAAGGTGAAAAAAACGGGAAAAACTATTGTTTTGACTGTTATACCAATTACACCAAAGAGAAATGATAAATGTGTAGAAGAGATGGAGCAAACGCAAAATGATGAATCGATTGCAGCAGATTTGGAAGAGGATTTGTCTGTTCTGGATACAGTGAGAGCTGATCTTAATGACTTGGTTATAAATGCTGGAATTGAAGATCACAATGCCTCAGGTCAGGCCAATGGTTGA
Protein sequence

>Msa1191660

MEAKDIRNRNRIRKILESKVVEEDGCDASKLYIKKLFRLNPIARYEDSRVIEVGEYKWTFIAREIDEGTLQFELLADIDNNPRLKIYALITIAIIHHSDPLLTNCTDRFHSVSKAHRGYILHLERAREEGFLDPKDNVQVELQIQMFGKNVFQPLLVKKYRAELLLTKMHFVNMICSSFFKKTVDNLKSLIDNKNKWQSFRTFVEESDQISKDQMFWEEQDVIQKALVNHFFVDGIVTSPLLMEILYIGYTSINANSTTAKFVKIEEDRFGLVGVPSLFTEVVGREYKPISESILREFCCMIVEMFVLDWIFRHKIRGNFTQSELNRTEKKSRRKVKKTGKTIVLTVIPITPKRNDKCVEEMEQTQNDESIAADLEEDLSVLDTVRADLNDLVINAGIEDHNASGQANG*