Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1193050 | sp|Q9ZPQ3|GEK1_ARATH | 74.051 | 316 | 78 | 1 | 46 | 357 | 1 | 316 | 2.16e-173 | 487 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1193050 | A0A396GML3 | 96.100 | 359 | 12 | 2 | 1 | 358 | 1 | 358 | 0.0 | 705 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1193050 | Msa1250990 | 0.834903 | 2.289950e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1193050 | MtrunA17_Chr8g0366111 | 96.100 | 359 | 12 | 2 | 1 | 358 | 1 | 358 | 0.0 | 705 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1193050 | AT2G03800.2 | 68.966 | 348 | 98 | 3 | 20 | 357 | 13 | 360 | 1.15e-175 | 492 |
| Msa1193050 | AT2G03800.1 | 74.051 | 316 | 78 | 1 | 46 | 357 | 1 | 316 | 2.20e-174 | 487 |
Find 116 sgRNAs with CRISPR-Local
Find 317 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCACATTTGTTTCTCCTTT+TGG | 0.133900 | 8_1:+39187842 | None:intergenic |
| TATAGTGGTGGAAGATTATT+TGG | 0.167588 | 8_1:-39191620 | Msa1193050:CDS |
| GACACTCAAAAGAAGTTATT+TGG | 0.171593 | 8_1:+39187422 | None:intergenic |
| TGGGTTGGTCACCTACTTTC+TGG | 0.174476 | 8_1:-39187887 | Msa1193050:CDS |
| TATGTTCCTATGTATTTATT+TGG | 0.233322 | 8_1:-39187157 | Msa1193050:three_prime_UTR |
| CATACATTTATTATCAATCT+AGG | 0.249400 | 8_1:+39187124 | None:intergenic |
| GCGGAGCAGAATATTAAAAT+TGG | 0.268594 | 8_1:-39187449 | Msa1193050:CDS |
| TTGGATTCGTTCAGTTAGTC+TGG | 0.301378 | 8_1:-39189030 | Msa1193050:intron |
| CAGTCTGATCCCTGAGTTTG+AGG | 0.317256 | 8_1:-39190751 | Msa1193050:intron |
| TCACCTACTTTCTGGATATT+CGG | 0.318220 | 8_1:-39187879 | Msa1193050:CDS |
| AAATAAGCCAACTATGTTTC+TGG | 0.319387 | 8_1:-39190270 | Msa1193050:CDS |
| ATCTAAGGCTGCTGCGGTTT+AGG | 0.321809 | 8_1:+39191950 | None:intergenic |
| AATATAGGAAAGATGGTGTT+TGG | 0.321846 | 8_1:-39187907 | Msa1193050:intron |
| GCAACCCGGACCCCATTTCC+AGG | 0.353692 | 8_1:-39191800 | Msa1193050:intron |
| CCCTCTTAGCCATGCCTGGC+TGG | 0.355358 | 8_1:-39191822 | Msa1193050:CDS |
| GATAAGAAGAAAGTCCTTCT+TGG | 0.358937 | 8_1:-39188323 | Msa1193050:CDS |
| CCAACTATGTTTCTGGAGAT+TGG | 0.370534 | 8_1:-39190263 | Msa1193050:intron |
| GAGGGACTGATGTCGGAAAC+TGG | 0.381603 | 8_1:-39188988 | Msa1193050:CDS |
| CAGTTAGTCTGGGAAGGACT+TGG | 0.381874 | 8_1:-39189019 | Msa1193050:CDS |
| GAGTAAGGCACCTCAAACTC+AGG | 0.385327 | 8_1:+39190741 | None:intergenic |
| ACATTATGTGCCTCGGCATA+TGG | 0.385428 | 8_1:-39188288 | Msa1193050:CDS |
| GCTCTCACTGTTCACCCTAT+TGG | 0.390767 | 8_1:-39191514 | Msa1193050:intron |
| TTGAACCTGGAAATGGGGTC+CGG | 0.403605 | 8_1:+39191795 | None:intergenic |
| TAATATGAATTTATTTGCCT+TGG | 0.408139 | 8_1:-39187095 | Msa1193050:three_prime_UTR |
| ACAAGGTGGGAAGAGGTTAC+TGG | 0.414639 | 8_1:-39191595 | Msa1193050:CDS |
| GGGTTGAGAGTGTTACTTCA+TGG | 0.417052 | 8_1:-39191649 | Msa1193050:CDS |
| AATTTACTGCAGGAGTTTCA+AGG | 0.417491 | 8_1:-39187504 | Msa1193050:intron |
| GTCTGGGAAGGACTTGGACT+TGG | 0.418424 | 8_1:-39189013 | Msa1193050:CDS |
| AATGCCCTCTTAGCCATGCC+TGG | 0.423510 | 8_1:-39191826 | Msa1193050:CDS |
| ATAGTTGGCTTATTTGTCAA+TGG | 0.432303 | 8_1:+39190278 | None:intergenic |
| GTCTATAAAAGCTGCATATG+AGG | 0.434564 | 8_1:-39187798 | Msa1193050:CDS |
| CCACCTCAAGGTGGGAAACC+TGG | 0.443476 | 8_1:-39190843 | Msa1193050:CDS |
| GGAGAAACAAATGTGGAGAT+TGG | 0.443599 | 8_1:-39187836 | Msa1193050:CDS |
| AGAAGATGAAATTACCAATA+GGG | 0.451407 | 8_1:+39191500 | None:intergenic |
| ATAAGAAGAAAGTCCTTCTT+GGG | 0.451631 | 8_1:-39188322 | Msa1193050:CDS |
| TGGGAAGGACTTGGACTTGG+AGG | 0.457377 | 8_1:-39189010 | Msa1193050:CDS |
| TTCCTCAATTTAGATTACTC+TGG | 0.461039 | 8_1:-39190318 | Msa1193050:intron |
| ACAAGATGCTGCTCAAGTTA+TGG | 0.465443 | 8_1:-39189203 | Msa1193050:CDS |
| CGTATCCAAGGTCCAATCCT+AGG | 0.470362 | 8_1:+39190801 | None:intergenic |
| ATGGCTAAGAGGGCATTGGC+AGG | 0.471091 | 8_1:+39191832 | None:intergenic |
| CAAGGTCCAATCCTAGGATT+CGG | 0.473623 | 8_1:+39190807 | None:intergenic |
| GTTGTACATGACATGTTGCT+TGG | 0.474822 | 8_1:-39192027 | Msa1193050:exon |
| GAAGGACTTGGACTTGGAGG+AGG | 0.478522 | 8_1:-39189007 | Msa1193050:CDS |
| GGGCAGCATTGCCGAATCCT+AGG | 0.481352 | 8_1:-39190818 | Msa1193050:CDS |
| TGGAAGATTATTTGGATACA+AGG | 0.483917 | 8_1:-39191612 | Msa1193050:CDS |
| CCAGCCAGGCATGGCTAAGA+GGG | 0.491015 | 8_1:+39191822 | None:intergenic |
| AGGAAAGATGGTGTTTGGGT+TGG | 0.495625 | 8_1:-39187902 | Msa1193050:CDS |
| TTCTGGATATTCGGTGCCAA+TGG | 0.497093 | 8_1:-39187870 | Msa1193050:CDS |
| TTCGGCAATGCTGCCCATCC+AGG | 0.498257 | 8_1:+39190825 | None:intergenic |
| TGAACCTGGAAATGGGGTCC+GGG | 0.500138 | 8_1:+39191796 | None:intergenic |
| ATATAGGAAAGATGGTGTTT+GGG | 0.501627 | 8_1:-39187906 | Msa1193050:intron |
| ACACCATTGGATGACGATGA+TGG | 0.501819 | 8_1:+39191896 | None:intergenic |
| TTGGCAGGGTTGATTGAAGC+AGG | 0.506215 | 8_1:+39191847 | None:intergenic |
| GTCCTTCTTGGGATAGGTGG+TGG | 0.506343 | 8_1:-39188311 | Msa1193050:CDS |
| TGCTGCTCAAGTTATGGCTC+AGG | 0.509122 | 8_1:-39189197 | Msa1193050:intron |
| ATTTACTGCAGGAGTTTCAA+GGG | 0.511764 | 8_1:-39187503 | Msa1193050:intron |
| TTTGGATACAAGGTGGGAAG+AGG | 0.512434 | 8_1:-39191602 | Msa1193050:CDS |
| TAGGTAGTACTGAAGACTAC+TGG | 0.514107 | 8_1:-39189231 | Msa1193050:CDS |
| ATACATTTATTATCAATCTA+GGG | 0.514210 | 8_1:+39187125 | None:intergenic |
| ACTCTGGAGGCCACTCATCA+TGG | 0.517171 | 8_1:-39190302 | Msa1193050:CDS |
| ATGTGGAGATTGGAGGAACT+TGG | 0.519523 | 8_1:-39187826 | Msa1193050:CDS |
| TGGCAGAAGAATGCCATCAC+AGG | 0.525499 | 8_1:-39187479 | Msa1193050:CDS |
| TGGCGGGAGTGGTTTAGTAT+TGG | 0.525717 | 8_1:+39191985 | None:intergenic |
| AGGCATGGCTAAGAGGGCAT+TGG | 0.527431 | 8_1:+39191828 | None:intergenic |
| CTCAAGGTGGGAAACCTGGA+TGG | 0.530408 | 8_1:-39190839 | Msa1193050:CDS |
| GGAGTGGTTTAGTATTGGAC+AGG | 0.530767 | 8_1:+39191990 | None:intergenic |
| AAGAAAGTCCTTCTTGGGAT+AGG | 0.531260 | 8_1:-39188317 | Msa1193050:CDS |
| GGTTGAGAGTGTTACTTCAT+GGG | 0.531477 | 8_1:-39191648 | Msa1193050:CDS |
| CTCAATTTAGATTACTCTGG+AGG | 0.532249 | 8_1:-39190315 | Msa1193050:intron |
| AGATTATTTGGATACAAGGT+GGG | 0.534032 | 8_1:-39191608 | Msa1193050:CDS |
| CCAATCTCCAGAAACATAGT+TGG | 0.538972 | 8_1:+39190263 | None:intergenic |
| TTTGGTTGAACCTGGAAATG+GGG | 0.542428 | 8_1:+39191790 | None:intergenic |
| CATCCAGGTTTCCCACCTTG+AGG | 0.543026 | 8_1:+39190840 | None:intergenic |
| TGGATTCGTTCAGTTAGTCT+GGG | 0.543480 | 8_1:-39189029 | Msa1193050:intron |
| ACTGCAGGAGTTTCAAGGGC+TGG | 0.545446 | 8_1:-39187499 | Msa1193050:intron |
| TTCGTTCAGTTAGTCTGGGA+AGG | 0.551066 | 8_1:-39189025 | Msa1193050:intron |
| GCATTGCCGAATCCTAGGAT+TGG | 0.555307 | 8_1:-39190813 | Msa1193050:CDS |
| ACTTCATGGGAAGAGTATAG+TGG | 0.562543 | 8_1:-39191635 | Msa1193050:CDS |
| AATTCGCCAAATAAATACAT+AGG | 0.564283 | 8_1:+39187151 | None:intergenic |
| CTCCGCGAGGAATCCTGTGA+TGG | 0.566946 | 8_1:+39187466 | None:intergenic |
| CTTGGAGGAGGGACTGATGT+CGG | 0.567295 | 8_1:-39188995 | Msa1193050:CDS |
| TGTGCAATAATTTCGCCACC+AGG | 0.572204 | 8_1:+39187758 | None:intergenic |
| CTTTGACTCAAATATTGCCA+AGG | 0.574252 | 8_1:+39187078 | None:intergenic |
| AGGGTTGATTGAAGCAGGAT+CGG | 0.574754 | 8_1:+39191852 | None:intergenic |
| CCAGGTTTCCCACCTTGAGG+TGG | 0.575933 | 8_1:+39190843 | None:intergenic |
| AAGGACTTGGACTTGGAGGA+GGG | 0.577258 | 8_1:-39189006 | Msa1193050:CDS |
| GCAACAATTGTCTTTCATCA+CGG | 0.578990 | 8_1:+39192052 | None:intergenic |
| GCACCGAATATCCAGAAAGT+AGG | 0.580008 | 8_1:+39187876 | None:intergenic |
| GGAGTTCCACATTTGCGTGA+AGG | 0.582715 | 8_1:-39190873 | Msa1193050:CDS |
| GAAACAAATGTGGAGATTGG+AGG | 0.582932 | 8_1:-39187833 | Msa1193050:CDS |
| GTGCCAATGGAAGATCCAAA+AGG | 0.584393 | 8_1:-39187857 | Msa1193050:CDS |
| AAAGTCCTTCTTGGGATAGG+TGG | 0.587842 | 8_1:-39188314 | Msa1193050:CDS |
| CACCATTGGATGACGATGAT+GGG | 0.591539 | 8_1:+39191897 | None:intergenic |
| AAGATTATTTGGATACAAGG+TGG | 0.591901 | 8_1:-39191609 | Msa1193050:CDS |
| ACATCACCTTCACGCAAATG+TGG | 0.592124 | 8_1:+39190867 | None:intergenic |
| TGGCTAAGAGGGCATTGGCA+GGG | 0.593618 | 8_1:+39191833 | None:intergenic |
| GTGGTGGACATTATGTGCCT+CGG | 0.594821 | 8_1:-39188295 | Msa1193050:CDS |
| CTGATGTCGGAAACTGGAGC+AGG | 0.596002 | 8_1:-39188982 | Msa1193050:intron |
| AATGTGCAGATTGCAGACAT+AGG | 0.599856 | 8_1:-39187370 | Msa1193050:three_prime_UTR |
| AACCCATCATCGTCATCCAA+TGG | 0.604709 | 8_1:-39191899 | Msa1193050:CDS |
| CGAATCCTAGGATTGGACCT+TGG | 0.608468 | 8_1:-39190806 | Msa1193050:CDS |
| GAAGGTGATGTTCCACCTCA+AGG | 0.608473 | 8_1:-39190855 | Msa1193050:CDS |
| ATAGGGTGAACAGTGAGAGC+AGG | 0.610959 | 8_1:+39191517 | None:intergenic |
| TGGATGACGATGATGGGTTG+AGG | 0.622829 | 8_1:+39191903 | None:intergenic |
| GTGATGTTCCACCTCAAGGT+GGG | 0.625555 | 8_1:-39190851 | Msa1193050:CDS |
| TCAAGGTGGGAAACCTGGAT+GGG | 0.628133 | 8_1:-39190838 | Msa1193050:CDS |
| GTCCACCACCTATCCCAAGA+AGG | 0.636477 | 8_1:+39188309 | None:intergenic |
| TTGATGATCTAAGGCTGCTG+CGG | 0.636578 | 8_1:+39191944 | None:intergenic |
| TCCAAAAGGAGAAACAAATG+TGG | 0.637066 | 8_1:-39187843 | Msa1193050:CDS |
| AGTAAGGCACCTCAAACTCA+GGG | 0.641613 | 8_1:+39190742 | None:intergenic |
| GCAACGAGAAGAGACACCAT+TGG | 0.644130 | 8_1:+39191883 | None:intergenic |
| TCATGGGAAGAGTATAGTGG+TGG | 0.644528 | 8_1:-39191632 | Msa1193050:CDS |
| AACACTATATCCATATGCCG+AGG | 0.673664 | 8_1:+39188278 | None:intergenic |
| GGTGATGTTCCACCTCAAGG+TGG | 0.677793 | 8_1:-39190852 | Msa1193050:CDS |
| TGTCAATGGTCCATGATGAG+TGG | 0.698185 | 8_1:+39190292 | None:intergenic |
| TGCCATCACAGGATTCCTCG+CGG | 0.720531 | 8_1:-39187468 | Msa1193050:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAGTAAAAAATATG+TGG | + | chr8_1:39189756-39189775 | None:intergenic | 10.0% |
| !!! | ATTTTCATTTTTTTTATTCA+AGG | + | chr8_1:39191163-39191182 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAGGAAAAAG+GGG | + | chr8_1:39187346-39187365 | None:intergenic | 15.0% |
| !! | GAAAAAAAAAAAAGGAAAAA+GGG | + | chr8_1:39187347-39187366 | None:intergenic | 15.0% |
| !! | AAATGAAGGAAAAAAAAAAA+AGG | + | chr8_1:39187355-39187374 | None:intergenic | 15.0% |
| !!! | ATTTTTTTGTTGTTTTTTGT+TGG | - | chr8_1:39187389-39187408 | Msa1193050:three_prime_UTR | 15.0% |
| !!! | TTTTTTTGTTGTTTTTTGTT+GGG | - | chr8_1:39187390-39187409 | Msa1193050:three_prime_UTR | 15.0% |
| !! | AAAAAGTAAGTAAAGTTTAT+AGG | - | chr8_1:39187953-39187972 | Msa1193050:intron | 15.0% |
| !! | AAAAGTAAGTAAAGTTTATA+GGG | - | chr8_1:39187954-39187973 | Msa1193050:intron | 15.0% |
| !! | TAATTTAATTCCAATTTGAA+CGG | - | chr8_1:39188410-39188429 | Msa1193050:intron | 15.0% |
| !!! | AAATATTATTTAAAAGCGTA+TGG | + | chr8_1:39190346-39190365 | None:intergenic | 15.0% |
| !!! | TTTGATTTTATTTTATCTTC+TGG | - | chr8_1:39190578-39190597 | Msa1193050:intron | 15.0% |
| !!! | AAATTTTCATCAATTTTAGA+AGG | + | chr8_1:39190722-39190741 | None:intergenic | 15.0% |
| !!! | ATTGATGAAAATTTTCTAAA+CGG | - | chr8_1:39190728-39190747 | Msa1193050:intron | 15.0% |
| !!! | TTATAATTGAATTTTCTGAT+TGG | - | chr8_1:39190875-39190894 | Msa1193050:CDS | 15.0% |
| !!! | GTTTGATATATGTTTTTTTT+TGG | - | chr8_1:39191508-39191527 | Msa1193050:intron | 15.0% |
| !! | ATACATTTATTATCAATCTA+GGG | + | chr8_1:39191986-39192005 | None:intergenic | 15.0% |
| !! | GGAAAAAAAAAAAAGGAAAA+AGG | + | chr8_1:39187348-39187367 | None:intergenic | 20.0% |
| !! | CAATAAATTGAGAAAAATGA+AGG | + | chr8_1:39187369-39187388 | None:intergenic | 20.0% |
| !!! | TTTTTTGTTGTTTTTTGTTG+GGG | - | chr8_1:39187391-39187410 | Msa1193050:three_prime_UTR | 20.0% |
| !!! | TTAAAATCTTGTGTTTTTGT+AGG | - | chr8_1:39188214-39188233 | Msa1193050:intron | 20.0% |
| !! | AATTTAATTCCAATTTGAAC+GGG | - | chr8_1:39188411-39188430 | Msa1193050:intron | 20.0% |
| !! | GCTTAATATATTATGTTACA+TGG | - | chr8_1:39188598-39188617 | Msa1193050:intron | 20.0% |
| !!! | TATCAATCTAAAATACATCT+AGG | + | chr8_1:39188890-39188909 | None:intergenic | 20.0% |
| !! | ATCTGAAAACAAAATAATGA+AGG | + | chr8_1:39189003-39189022 | None:intergenic | 20.0% |
| !! | AAGATGAATATGAATTGAAA+AGG | + | chr8_1:39189056-39189075 | None:intergenic | 20.0% |
| !! | TATTGAAAACCAACAAAATA+TGG | + | chr8_1:39189117-39189136 | None:intergenic | 20.0% |
| !!! | TATAAAGTGTTACCAAATAT+CGG | - | chr8_1:39189525-39189544 | Msa1193050:intron | 20.0% |
| !! | AAAAAGCTAAAGATTTGTAT+TGG | - | chr8_1:39190010-39190029 | Msa1193050:intron | 20.0% |
| !! | TTTACTGAAATGATATTGTT+TGG | - | chr8_1:39190059-39190078 | Msa1193050:intron | 20.0% |
| !!! | GAAAATATTTTGTTGTTAGT+TGG | - | chr8_1:39190166-39190185 | Msa1193050:intron | 20.0% |
| !! | ATGAACTAATTTGAGAAAAT+AGG | - | chr8_1:39190385-39190404 | Msa1193050:intron | 20.0% |
| !! | TGAACTAATTTGAGAAAATA+GGG | - | chr8_1:39190386-39190405 | Msa1193050:intron | 20.0% |
| !! | CAATTATAAAGTCACTAAAA+TGG | + | chr8_1:39190864-39190883 | None:intergenic | 20.0% |
| !! | TATGTTCCTATGTATTTATT+TGG | - | chr8_1:39191951-39191970 | Msa1193050:CDS | 20.0% |
| !! | CATACATTTATTATCAATCT+AGG | + | chr8_1:39191987-39192006 | None:intergenic | 20.0% |
| !! | TAATATGAATTTATTTGCCT+TGG | - | chr8_1:39192013-39192032 | Msa1193050:CDS | 20.0% |
| !!! | AAAGTGATTTTGATGATCTA+AGG | + | chr8_1:39187176-39187195 | None:intergenic | 25.0% |
| !!! | ATGAAAAGTTTTGTGAATGA+AGG | - | chr8_1:39187438-39187457 | Msa1193050:CDS | 25.0% |
| !!! | TGAAAAGTTTTGTGAATGAA+GGG | - | chr8_1:39187439-39187458 | Msa1193050:CDS | 25.0% |
| ! | AGAAGATGAAATTACCAATA+GGG | + | chr8_1:39187611-39187630 | None:intergenic | 25.0% |
| !! | TAGTTTCTGTCCAAATTTTT+CGG | - | chr8_1:39187863-39187882 | Msa1193050:CDS | 25.0% |
| ! | AATACTAAAATGTTGGTACA+AGG | - | chr8_1:39187913-39187932 | Msa1193050:intron | 25.0% |
| ! | AAATCATTAAACAACCCAAA+TGG | - | chr8_1:39188174-39188193 | Msa1193050:intron | 25.0% |
| ! | AGAAACATAAGAAAAGAGTA+AGG | + | chr8_1:39188385-39188404 | None:intergenic | 25.0% |
| ! | AGATAAAACTAGAACACAAA+AGG | + | chr8_1:39188509-39188528 | None:intergenic | 25.0% |
| !! | TGAATATTTCTGCAAATACA+TGG | - | chr8_1:39188551-39188570 | Msa1193050:intron | 25.0% |
| ! | ATGCAATATGCTTATAATAG+AGG | + | chr8_1:39188925-39188944 | None:intergenic | 25.0% |
| ! | TCAATACGAAATGAGATATT+AGG | - | chr8_1:39189131-39189150 | Msa1193050:intron | 25.0% |
| !! | TGTTAGTGCTCAATTTTTAT+TGG | - | chr8_1:39189301-39189320 | Msa1193050:intron | 25.0% |
| ! | TTGTCAAATAGTGACTATAA+CGG | - | chr8_1:39189394-39189413 | Msa1193050:intron | 25.0% |
| ! | TTATACTAAATACCATATCG+TGG | + | chr8_1:39189456-39189475 | None:intergenic | 25.0% |
| !! | TATAAAGTGTTACCAAATAC+CGG | - | chr8_1:39189471-39189490 | Msa1193050:intron | 25.0% |
| ! | TTATACAAAATACCATATCG+TGG | + | chr8_1:39189510-39189529 | None:intergenic | 25.0% |
| !! | ATAAAGTGTTACCAAATATC+GGG | - | chr8_1:39189526-39189545 | Msa1193050:intron | 25.0% |
| !!! | ATTTCATCTTTTGAAACAGA+TGG | + | chr8_1:39190264-39190283 | None:intergenic | 25.0% |
| !!! | TTTTGAAATTTTGACCTTGA+TGG | - | chr8_1:39190305-39190324 | Msa1193050:CDS | 25.0% |
| !! | ATTATTTAAAAGCGTATGGA+AGG | + | chr8_1:39190342-39190361 | None:intergenic | 25.0% |
| ! | AAGTACTTATGTCAATAGAT+GGG | + | chr8_1:39190457-39190476 | None:intergenic | 25.0% |
| ! | AATTACATTGATGAACAACA+TGG | - | chr8_1:39190940-39190959 | Msa1193050:intron | 25.0% |
| ! | ATTACATTGATGAACAACAT+GGG | - | chr8_1:39190941-39190960 | Msa1193050:intron | 25.0% |
| ! | TAGAACTCAAGACTAAAAAA+AGG | + | chr8_1:39191080-39191099 | None:intergenic | 25.0% |
| !! | TTTTTGCAATATAGGAAAGA+TGG | - | chr8_1:39191194-39191213 | Msa1193050:intron | 25.0% |
| !!! | AATCACTTTTAATGCAAATC+TGG | + | chr8_1:39191785-39191804 | None:intergenic | 25.0% |
| !! | CTCTATTAGAGATAATTTTC+AGG | - | chr8_1:39191903-39191922 | Msa1193050:CDS | 25.0% |
| ! | AATTCGCCAAATAAATACAT+AGG | + | chr8_1:39191960-39191979 | None:intergenic | 25.0% |
| ! | AAAAAGGAAAAAGGGGTTTT+TGG | + | chr8_1:39187339-39187358 | None:intergenic | 30.0% |
| ! | TATAGTGGTGGAAGATTATT+TGG | - | chr8_1:39187488-39187507 | Msa1193050:CDS | 30.0% |
| TGGAAGATTATTTGGATACA+AGG | - | chr8_1:39187496-39187515 | Msa1193050:intron | 30.0% | |
| AAGATTATTTGGATACAAGG+TGG | - | chr8_1:39187499-39187518 | Msa1193050:intron | 30.0% | |
| AGATTATTTGGATACAAGGT+GGG | - | chr8_1:39187500-39187519 | Msa1193050:intron | 30.0% | |
| GAGAAGATGAAATTACCAAT+AGG | + | chr8_1:39187612-39187631 | None:intergenic | 30.0% | |
| ! | TCGCAATTTTTGAATTCGAA+TGG | + | chr8_1:39187890-39187909 | None:intergenic | 30.0% |
| GCGACTAAATACTAAAATGT+TGG | - | chr8_1:39187906-39187925 | Msa1193050:intron | 30.0% | |
| !! | GTGTTTGGTAATGATATGTT+AGG | - | chr8_1:39188041-39188060 | Msa1193050:intron | 30.0% |
| TGTGTGAATGTTGTAAACTT+TGG | - | chr8_1:39188143-39188162 | Msa1193050:intron | 30.0% | |
| GTGTGAATGTTGTAAACTTT+GGG | - | chr8_1:39188144-39188163 | Msa1193050:intron | 30.0% | |
| TGTGAATGTTGTAAACTTTG+GGG | - | chr8_1:39188145-39188164 | Msa1193050:intron | 30.0% | |
| ! | ACTTCTGAAAAATATTGCTC+AGG | - | chr8_1:39188330-39188349 | Msa1193050:CDS | 30.0% |
| AAAAGAAAACCCGTTCAAAT+TGG | + | chr8_1:39188423-39188442 | None:intergenic | 30.0% | |
| TTCCTCAATTTAGATTACTC+TGG | - | chr8_1:39188790-39188809 | Msa1193050:intron | 30.0% | |
| ! | ATAGTTGGCTTATTTGTCAA+TGG | + | chr8_1:39188833-39188852 | None:intergenic | 30.0% |
| AAATAAGCCAACTATGTTTC+TGG | - | chr8_1:39188838-39188857 | Msa1193050:intron | 30.0% | |
| ! | CAATCTAAAATACATCTAGG+AGG | + | chr8_1:39188887-39188906 | None:intergenic | 30.0% |
| AAGAACTTAAACCATGTTCA+CGG | + | chr8_1:39188975-39188994 | None:intergenic | 30.0% | |
| AAATTACTGGAACTTTCATC+AGG | + | chr8_1:39189082-39189101 | None:intergenic | 30.0% | |
| ! | AAGAAGGTTCCATATTTTGT+TGG | - | chr8_1:39189105-39189124 | Msa1193050:intron | 30.0% |
| ! | GCTTCATTTTATTGCTCTTT+TGG | + | chr8_1:39189159-39189178 | None:intergenic | 30.0% |
| !! | GTGTTGTTTAAAATCCTGAA+TGG | + | chr8_1:39189257-39189276 | None:intergenic | 30.0% |
| ! | TATTTGACAACACTGGTTAA+GGG | + | chr8_1:39189384-39189403 | None:intergenic | 30.0% |
| ! | ATAAAGTGTTACCAAATACC+GGG | - | chr8_1:39189472-39189491 | Msa1193050:intron | 30.0% |
| ! | TAAAGTGTTACCAAATATCG+GGG | - | chr8_1:39189527-39189546 | Msa1193050:intron | 30.0% |
| CTAGAAAAACTCTACAAATG+TGG | + | chr8_1:39189703-39189722 | None:intergenic | 30.0% | |
| !!! | CTTTATTTTGAAGTAGTCTG+TGG | - | chr8_1:39189767-39189786 | Msa1193050:intron | 30.0% |
| ATTTCAGCTAGTATAACAAC+TGG | - | chr8_1:39189842-39189861 | Msa1193050:intron | 30.0% | |
| GTATAACAACTGGATAATTC+TGG | - | chr8_1:39189852-39189871 | Msa1193050:intron | 30.0% | |
| TTCAAAATCAGAGGATCATA+TGG | + | chr8_1:39190292-39190311 | None:intergenic | 30.0% | |
| GGTCAAAATTTCAAAATCAG+AGG | + | chr8_1:39190301-39190320 | None:intergenic | 30.0% | |
| CAAGTACTTATGTCAATAGA+TGG | + | chr8_1:39190458-39190477 | None:intergenic | 30.0% | |
| TCAATGCAGAGACAATATTT+AGG | - | chr8_1:39190669-39190688 | Msa1193050:intron | 30.0% | |
| ATAAGAAGAAAGTCCTTCTT+GGG | - | chr8_1:39190786-39190805 | Msa1193050:CDS | 30.0% | |
| TGCACACTTGAATAGATTAT+GGG | - | chr8_1:39190913-39190932 | Msa1193050:intron | 30.0% | |
| !!! | TGCTTTGCTTTTTGCAATAT+AGG | - | chr8_1:39191186-39191205 | Msa1193050:intron | 30.0% |
| AATATAGGAAAGATGGTGTT+TGG | - | chr8_1:39191201-39191220 | Msa1193050:intron | 30.0% | |
| ATATAGGAAAGATGGTGTTT+GGG | - | chr8_1:39191202-39191221 | Msa1193050:intron | 30.0% | |
| ! | ATGCACATTAAGCTTACTTT+TGG | + | chr8_1:39191382-39191401 | None:intergenic | 30.0% |
| ATGCAAACAATGATTACAGA+AGG | + | chr8_1:39191408-39191427 | None:intergenic | 30.0% | |
| ! | GCTGTAATGCTTTTACTTTA+CGG | - | chr8_1:39191560-39191579 | Msa1193050:CDS | 30.0% |
| TTTACCCTAAAATTTACTGC+AGG | - | chr8_1:39191594-39191613 | Msa1193050:CDS | 30.0% | |
| ! | AACTCCTGCAGTAAATTTTA+GGG | + | chr8_1:39191601-39191620 | None:intergenic | 30.0% |
| ! | AAACTCCTGCAGTAAATTTT+AGG | + | chr8_1:39191602-39191621 | None:intergenic | 30.0% |
| GACACTCAAAAGAAGTTATT+TGG | + | chr8_1:39191689-39191708 | None:intergenic | 30.0% | |
| !!! | CTTTTGAGTGTCGATTTAAA+AGG | - | chr8_1:39191697-39191716 | Msa1193050:intron | 30.0% |
| !! | TAATTTTCAGGCACTTTAGA+AGG | - | chr8_1:39191915-39191934 | Msa1193050:CDS | 30.0% |
| GCAACAATTGTCTTTCATCA+CGG | + | chr8_1:39187059-39187078 | None:intergenic | 35.0% | |
| !! | TTTTGGTTGAACCTGGAAAT+GGG | + | chr8_1:39187322-39187341 | None:intergenic | 35.0% |
| !!! | TTTTTGGTTGAACCTGGAAA+TGG | + | chr8_1:39187323-39187342 | None:intergenic | 35.0% |
| ! | GGGGTGTTTATGATGAATTT+AGG | - | chr8_1:39187410-39187429 | Msa1193050:exon | 35.0% |
| AACCTACGAATTACGAAACA+TGG | - | chr8_1:39187680-39187699 | Msa1193050:intron | 35.0% | |
| TTGAACGTAGCTACATATGT+TGG | - | chr8_1:39187767-39187786 | Msa1193050:CDS | 35.0% | |
| TTCGAATGGACCGAAAAATT+TGG | + | chr8_1:39187876-39187895 | None:intergenic | 35.0% | |
| ! | TGAAGTGAAAAGAGTGTGTT+TGG | - | chr8_1:39188026-39188045 | Msa1193050:intron | 35.0% |
| ATTTGATGTCACTACCCAAA+TGG | - | chr8_1:39188084-39188103 | Msa1193050:intron | 35.0% | |
| TCATTAAACAACCCAAATGG+TGG | - | chr8_1:39188177-39188196 | Msa1193050:intron | 35.0% | |
| !! | TTTTTCAGAAGTCGTATCCA+AGG | + | chr8_1:39188322-39188341 | None:intergenic | 35.0% |
| TAACAATCAACAGGAAACTG+AGG | + | chr8_1:39188450-39188469 | None:intergenic | 35.0% | |
| CAACACAAGTAACAATCAAC+AGG | + | chr8_1:39188459-39188478 | None:intergenic | 35.0% | |
| ! | TTGTTACTTGTGTTGTGTGA+TGG | - | chr8_1:39188464-39188483 | Msa1193050:intron | 35.0% |
| TTAAGCCATCTTCCTCAAAT+GGG | + | chr8_1:39188584-39188603 | None:intergenic | 35.0% | |
| ATTAAGCCATCTTCCTCAAA+TGG | + | chr8_1:39188585-39188604 | None:intergenic | 35.0% | |
| CATAAAACGTATGCAACAAG+TGG | + | chr8_1:39188767-39188786 | None:intergenic | 35.0% | |
| CTCCAGAGTAATCTAAATTG+AGG | + | chr8_1:39188795-39188814 | None:intergenic | 35.0% | |
| CTCAATTTAGATTACTCTGG+AGG | - | chr8_1:39188793-39188812 | Msa1193050:intron | 35.0% | |
| CATACTTCATTTGTGCGTAA+CGG | - | chr8_1:39189206-39189225 | Msa1193050:CDS | 35.0% | |
| ATACTTCATTTGTGCGTAAC+GGG | - | chr8_1:39189207-39189226 | Msa1193050:CDS | 35.0% | |
| GAAATAGCCAACTCATCATT+TGG | - | chr8_1:39189341-39189360 | Msa1193050:intron | 35.0% | |
| ! | ATTTGACAACACTGGTTAAG+GGG | + | chr8_1:39189383-39189402 | None:intergenic | 35.0% |
| ! | CTATTTGACAACACTGGTTA+AGG | + | chr8_1:39189385-39189404 | None:intergenic | 35.0% |
| TAGTCACTATTTGACAACAC+TGG | + | chr8_1:39189391-39189410 | None:intergenic | 35.0% | |
| ! | TAAAGTGTTACCAAATACCG+GGG | - | chr8_1:39189473-39189492 | Msa1193050:intron | 35.0% |
| AGAAAGAGATATCAGGTTTG+GGG | + | chr8_1:39189618-39189637 | None:intergenic | 35.0% | |
| CAGAAAGAGATATCAGGTTT+GGG | + | chr8_1:39189619-39189638 | None:intergenic | 35.0% | |
| ACAGAAAGAGATATCAGGTT+TGG | + | chr8_1:39189620-39189639 | None:intergenic | 35.0% | |
| !! | TATCACTTTTGTTTGATGCC+TGG | - | chr8_1:39189651-39189670 | Msa1193050:intron | 35.0% |
| AAACTCTACAAATGTGGACA+TGG | + | chr8_1:39189697-39189716 | None:intergenic | 35.0% | |
| CAACTGGATAATTCTGGTAT+AGG | - | chr8_1:39189858-39189877 | Msa1193050:intron | 35.0% | |
| TGTTAGTTGGCATTCTTGTT+TGG | - | chr8_1:39190179-39190198 | Msa1193050:intron | 35.0% | |
| AGGAATAGTATAGTCCATCA+AGG | + | chr8_1:39190322-39190341 | None:intergenic | 35.0% | |
| TATTGACATAAGTACTTGCG+AGG | - | chr8_1:39190460-39190479 | Msa1193050:intron | 35.0% | |
| GATAAGAAGAAAGTCCTTCT+TGG | - | chr8_1:39190785-39190804 | Msa1193050:CDS | 35.0% | |
| ! | TGAATTTTCTGATTGGCGAA+AGG | - | chr8_1:39190882-39190901 | Msa1193050:intron | 35.0% |
| ! | GAATTTTCTGATTGGCGAAA+GGG | - | chr8_1:39190883-39190902 | Msa1193050:intron | 35.0% |
| CTGCACACTTGAATAGATTA+TGG | - | chr8_1:39190912-39190931 | Msa1193050:intron | 35.0% | |
| AGGCTAAAGTAGTCTAACTA+AGG | + | chr8_1:39191006-39191025 | None:intergenic | 35.0% | |
| GATGTGTTGCATATGAAATG+AGG | + | chr8_1:39191026-39191045 | None:intergenic | 35.0% | |
| TCACCTACTTTCTGGATATT+CGG | - | chr8_1:39191229-39191248 | Msa1193050:intron | 35.0% | |
| TCCAAAAGGAGAAACAAATG+TGG | - | chr8_1:39191265-39191284 | Msa1193050:intron | 35.0% | |
| !! | TCCACATTTGTTTCTCCTTT+TGG | + | chr8_1:39191269-39191288 | None:intergenic | 35.0% |
| GTCTATAAAAGCTGCATATG+AGG | - | chr8_1:39191310-39191329 | Msa1193050:intron | 35.0% | |
| AATTTACTGCAGGAGTTTCA+AGG | - | chr8_1:39191604-39191623 | Msa1193050:CDS | 35.0% | |
| ATTTACTGCAGGAGTTTCAA+GGG | - | chr8_1:39191605-39191624 | Msa1193050:CDS | 35.0% | |
| GCGGAGCAGAATATTAAAAT+TGG | - | chr8_1:39191659-39191678 | Msa1193050:CDS | 35.0% | |
| CTTTGACTCAAATATTGCCA+AGG | + | chr8_1:39192033-39192052 | None:intergenic | 35.0% | |
| GTTGTACATGACATGTTGCT+TGG | - | chr8_1:39187081-39187100 | Msa1193050:three_prime_UTR | 40.0% | |
| TGCGGTTTAGGTGAAAAAAG+GGG | + | chr8_1:39187149-39187168 | None:intergenic | 40.0% | |
| CTGCGGTTTAGGTGAAAAAA+GGG | + | chr8_1:39187150-39187169 | None:intergenic | 40.0% | |
| TTTGGTTGAACCTGGAAATG+GGG | + | chr8_1:39187321-39187340 | None:intergenic | 40.0% | |
| !! | GGTTGAGAGTGTTACTTCAT+GGG | - | chr8_1:39187460-39187479 | Msa1193050:CDS | 40.0% |
| ! | ACTTCATGGGAAGAGTATAG+TGG | - | chr8_1:39187473-39187492 | Msa1193050:CDS | 40.0% |
| TGCCATGTTTCGTAATTCGT+AGG | + | chr8_1:39187685-39187704 | None:intergenic | 40.0% | |
| TACGAAACATGGCATGTCAT+TGG | - | chr8_1:39187691-39187710 | Msa1193050:intron | 40.0% | |
| TCCACACTTCAAATTGAAGG+CGG | + | chr8_1:39187812-39187831 | None:intergenic | 40.0% | |
| GCATCCACACTTCAAATTGA+AGG | + | chr8_1:39187815-39187834 | None:intergenic | 40.0% | |
| CAAATCGACTGTGACCATTT+GGG | + | chr8_1:39188101-39188120 | None:intergenic | 40.0% | |
| TCAAATCGACTGTGACCATT+TGG | + | chr8_1:39188102-39188121 | None:intergenic | 40.0% | |
| ATTGTCTGTGACCACCATTT+GGG | + | chr8_1:39188191-39188210 | None:intergenic | 40.0% | |
| AATTGTCTGTGACCACCATT+TGG | + | chr8_1:39188192-39188211 | None:intergenic | 40.0% | |
| ! | CATGGATTGTTTCCCATTTG+AGG | - | chr8_1:39188569-39188588 | Msa1193050:intron | 40.0% |
| TGTTTCCCATTTGAGGAAGA+TGG | - | chr8_1:39188576-39188595 | Msa1193050:intron | 40.0% | |
| CCAATCTCCAGAAACATAGT+TGG | + | chr8_1:39188848-39188867 | None:intergenic | 40.0% | |
| !! | CCAACTATGTTTCTGGAGAT+TGG | - | chr8_1:39188845-39188864 | Msa1193050:intron | 40.0% |
| ! | GTTCCAGTAATTTGCGAAGA+AGG | - | chr8_1:39189089-39189108 | Msa1193050:intron | 40.0% |
| GAACCTTCTTCGCAAATTAC+TGG | + | chr8_1:39189095-39189114 | None:intergenic | 40.0% | |
| ! | TTTGACAACACTGGTTAAGG+GGG | + | chr8_1:39189382-39189401 | None:intergenic | 40.0% |
| ATCTCTGTTGTTCCACGATA+TGG | - | chr8_1:39189441-39189460 | Msa1193050:intron | 40.0% | |
| CCAACACAGAAAGAGATATC+AGG | + | chr8_1:39189625-39189644 | None:intergenic | 40.0% | |
| CCTGATATCTCTTTCTGTGT+TGG | - | chr8_1:39189622-39189641 | Msa1193050:intron | 40.0% | |
| ! | TAGGTAGTACTGAAGACTAC+TGG | - | chr8_1:39189877-39189896 | Msa1193050:intron | 40.0% |
| ACAAGATGCTGCTCAAGTTA+TGG | - | chr8_1:39189905-39189924 | Msa1193050:intron | 40.0% | |
| GTAACAGAATGTATGCACAC+AGG | + | chr8_1:39189990-39190009 | None:intergenic | 40.0% | |
| TTGGATTCGTTCAGTTAGTC+TGG | - | chr8_1:39190078-39190097 | Msa1193050:intron | 40.0% | |
| ! | TGGATTCGTTCAGTTAGTCT+GGG | - | chr8_1:39190079-39190098 | Msa1193050:intron | 40.0% |
| !! | TGGCATTCTTGTTTGGTGTT+TGG | - | chr8_1:39190186-39190205 | Msa1193050:intron | 40.0% |
| GACACATGCGAAAGATGTTA+AGG | + | chr8_1:39190223-39190242 | None:intergenic | 40.0% | |
| AAGAAAGTCCTTCTTGGGAT+AGG | - | chr8_1:39190791-39190810 | Msa1193050:CDS | 40.0% | |
| AACACTATATCCATATGCCG+AGG | + | chr8_1:39190833-39190852 | None:intergenic | 40.0% | |
| ! | TCTCCTTTTGGATCTTCCAT+TGG | + | chr8_1:39191257-39191276 | None:intergenic | 40.0% |
| GGAGAAACAAATGTGGAGAT+TGG | - | chr8_1:39191272-39191291 | Msa1193050:intron | 40.0% | |
| GAAACAAATGTGGAGATTGG+AGG | - | chr8_1:39191275-39191294 | Msa1193050:intron | 40.0% | |
| !! | GCAACTAAATCTGCTTTTCC+TGG | - | chr8_1:39191332-39191351 | Msa1193050:intron | 40.0% |
| !! | ACTAAATCTGCTTTTCCTGG+TGG | - | chr8_1:39191335-39191354 | Msa1193050:intron | 40.0% |
| ! | TTTTAATATTCTGCTCCGCG+AGG | + | chr8_1:39191658-39191677 | None:intergenic | 40.0% |
| AATGTGCAGATTGCAGACAT+AGG | - | chr8_1:39191738-39191757 | Msa1193050:intron | 40.0% | |
| ! | GGAGTGGTTTAGTATTGGAC+AGG | + | chr8_1:39187121-39187140 | None:intergenic | 45.0% |
| TTAGGTGAAAAAAGGGGTGG+CGG | + | chr8_1:39187143-39187162 | None:intergenic | 45.0% | |
| GGTTTAGGTGAAAAAAGGGG+TGG | + | chr8_1:39187146-39187165 | None:intergenic | 45.0% | |
| GCTGCGGTTTAGGTGAAAAA+AGG | + | chr8_1:39187151-39187170 | None:intergenic | 45.0% | |
| ! | TTGATGATCTAAGGCTGCTG+CGG | + | chr8_1:39187167-39187186 | None:intergenic | 45.0% |
| AACCCATCATCGTCATCCAA+TGG | - | chr8_1:39187209-39187228 | Msa1193050:three_prime_UTR | 45.0% | |
| CACCATTGGATGACGATGAT+GGG | + | chr8_1:39187214-39187233 | None:intergenic | 45.0% | |
| ACACCATTGGATGACGATGA+TGG | + | chr8_1:39187215-39187234 | None:intergenic | 45.0% | |
| ! | AGGGTTGATTGAAGCAGGAT+CGG | + | chr8_1:39187259-39187278 | None:intergenic | 45.0% |
| !!! | AAGGGGTTTTTGGTTGAACC+TGG | + | chr8_1:39187329-39187348 | None:intergenic | 45.0% |
| !! | GGGTTGAGAGTGTTACTTCA+TGG | - | chr8_1:39187459-39187478 | Msa1193050:CDS | 45.0% |
| ! | TCATGGGAAGAGTATAGTGG+TGG | - | chr8_1:39187476-39187495 | Msa1193050:CDS | 45.0% |
| TTTGGATACAAGGTGGGAAG+AGG | - | chr8_1:39187506-39187525 | Msa1193050:intron | 45.0% | |
| ACTTCAAATTGAAGGCGGTC+TGG | + | chr8_1:39187807-39187826 | None:intergenic | 45.0% | |
| ! | ACCGCCTTCAATTTGAAGTG+TGG | - | chr8_1:39187808-39187827 | Msa1193050:CDS | 45.0% |
| ACATCACCTTCACGCAAATG+TGG | + | chr8_1:39188244-39188263 | None:intergenic | 45.0% | |
| CAAGGTCCAATCCTAGGATT+CGG | + | chr8_1:39188304-39188323 | None:intergenic | 45.0% | |
| ! | AGTAAGGCACCTCAAACTCA+GGG | + | chr8_1:39188369-39188388 | None:intergenic | 45.0% |
| TGTCAATGGTCCATGATGAG+TGG | + | chr8_1:39188819-39188838 | None:intergenic | 45.0% | |
| TCAAGTTCGTACCGTGAACA+TGG | - | chr8_1:39188961-39188980 | Msa1193050:intron | 45.0% | |
| !!! | TGCGTAACGGGTATTTTTGC+TGG | - | chr8_1:39189219-39189238 | Msa1193050:CDS | 45.0% |
| GGTATTGCGAAAGTCCATTC+AGG | - | chr8_1:39189240-39189259 | Msa1193050:intron | 45.0% | |
| GGAAGGACCAAATGATGAGT+TGG | + | chr8_1:39189351-39189370 | None:intergenic | 45.0% | |
| GCTTTAGCAGTTCCACGATA+TGG | - | chr8_1:39189495-39189514 | Msa1193050:intron | 45.0% | |
| TGTGCTAAAGCCCCGATATT+TGG | + | chr8_1:39189540-39189559 | None:intergenic | 45.0% | |
| !! | TGGGGATGAGTTGATCAGTT+GGG | + | chr8_1:39189600-39189619 | None:intergenic | 45.0% |
| !! | TTGGGGATGAGTTGATCAGT+TGG | + | chr8_1:39189601-39189620 | None:intergenic | 45.0% |
| GGACATGGATGAAAGCAGAA+AGG | + | chr8_1:39189682-39189701 | None:intergenic | 45.0% | |
| ! | TTCGTTCAGTTAGTCTGGGA+AGG | - | chr8_1:39190083-39190102 | Msa1193050:intron | 45.0% |
| GAGCGTACAGAAACAACTTG+TGG | - | chr8_1:39190493-39190512 | Msa1193050:intron | 45.0% | |
| AATTCTCACACTCTTCCTGC+AGG | - | chr8_1:39190756-39190775 | Msa1193050:CDS | 45.0% | |
| ATTCTCACACTCTTCCTGCA+GGG | - | chr8_1:39190757-39190776 | Msa1193050:CDS | 45.0% | |
| CTTCTTATCATTCTCCCTGC+AGG | + | chr8_1:39190774-39190793 | None:intergenic | 45.0% | |
| AAAGTCCTTCTTGGGATAGG+TGG | - | chr8_1:39190794-39190813 | Msa1193050:CDS | 45.0% | |
| ACATTATGTGCCTCGGCATA+TGG | - | chr8_1:39190820-39190839 | Msa1193050:CDS | 45.0% | |
| CATGGGAGTTAAAACTCCAC+TGG | - | chr8_1:39190958-39190977 | Msa1193050:intron | 45.0% | |
| CTCCACTGGAATGAAGACAA+AGG | - | chr8_1:39190972-39190991 | Msa1193050:intron | 45.0% | |
| CACCTTTGTCTTCATTCCAG+TGG | + | chr8_1:39190977-39190996 | None:intergenic | 45.0% | |
| CACTGGAATGAAGACAAAGG+TGG | - | chr8_1:39190975-39190994 | Msa1193050:intron | 45.0% | |
| AGGAAAGATGGTGTTTGGGT+TGG | - | chr8_1:39191206-39191225 | Msa1193050:intron | 45.0% | |
| GCACCGAATATCCAGAAAGT+AGG | + | chr8_1:39191235-39191254 | None:intergenic | 45.0% | |
| !! | TTCTGGATATTCGGTGCCAA+TGG | - | chr8_1:39191238-39191257 | Msa1193050:intron | 45.0% |
| GTGCCAATGGAAGATCCAAA+AGG | - | chr8_1:39191251-39191270 | Msa1193050:intron | 45.0% | |
| ATGTGGAGATTGGAGGAACT+TGG | - | chr8_1:39191282-39191301 | Msa1193050:intron | 45.0% | |
| TGTGCAATAATTTCGCCACC+AGG | + | chr8_1:39191353-39191372 | None:intergenic | 45.0% | |
| !! | TAATTCTTATAAAAAAAAAA+TGG | + | chr8_1:39187640-39187659 | None:intergenic | 5.0% |
| TGGCGGGAGTGGTTTAGTAT+TGG | + | chr8_1:39187126-39187145 | None:intergenic | 50.0% | |
| TAGGTGAAAAAAGGGGTGGC+GGG | + | chr8_1:39187142-39187161 | None:intergenic | 50.0% | |
| ! | ATCTAAGGCTGCTGCGGTTT+AGG | + | chr8_1:39187161-39187180 | None:intergenic | 50.0% |
| !! | TGGATGACGATGATGGGTTG+AGG | + | chr8_1:39187208-39187227 | None:intergenic | 50.0% |
| GCAACGAGAAGAGACACCAT+TGG | + | chr8_1:39187228-39187247 | None:intergenic | 50.0% | |
| ! | TTGGCAGGGTTGATTGAAGC+AGG | + | chr8_1:39187264-39187283 | None:intergenic | 50.0% |
| TTGAACCTGGAAATGGGGTC+CGG | + | chr8_1:39187316-39187335 | None:intergenic | 50.0% | |
| ACAAGGTGGGAAGAGGTTAC+TGG | - | chr8_1:39187513-39187532 | Msa1193050:intron | 50.0% | |
| ATAGGGTGAACAGTGAGAGC+AGG | + | chr8_1:39187594-39187613 | None:intergenic | 50.0% | |
| GCTCTCACTGTTCACCCTAT+TGG | - | chr8_1:39187594-39187613 | Msa1193050:intron | 50.0% | |
| ! | AAGAGCACACTGCACACACA+CGG | + | chr8_1:39188005-39188024 | None:intergenic | 50.0% |
| GGAGTTCCACATTTGCGTGA+AGG | - | chr8_1:39188235-39188254 | Msa1193050:intron | 50.0% | |
| GAAGGTGATGTTCCACCTCA+AGG | - | chr8_1:39188253-39188272 | Msa1193050:intron | 50.0% | |
| GTGATGTTCCACCTCAAGGT+GGG | - | chr8_1:39188257-39188276 | Msa1193050:intron | 50.0% | |
| TCAAGGTGGGAAACCTGGAT+GGG | - | chr8_1:39188270-39188289 | Msa1193050:intron | 50.0% | |
| GCATTGCCGAATCCTAGGAT+TGG | - | chr8_1:39188295-39188314 | Msa1193050:CDS | 50.0% | |
| CGAATCCTAGGATTGGACCT+TGG | - | chr8_1:39188302-39188321 | Msa1193050:CDS | 50.0% | |
| CGTATCCAAGGTCCAATCCT+AGG | + | chr8_1:39188310-39188329 | None:intergenic | 50.0% | |
| CAGTCTGATCCCTGAGTTTG+AGG | - | chr8_1:39188357-39188376 | Msa1193050:intron | 50.0% | |
| ! | GAGTAAGGCACCTCAAACTC+AGG | + | chr8_1:39188370-39188389 | None:intergenic | 50.0% |
| TTAAGGGGGTAGAGTGAGGA+AGG | + | chr8_1:39189368-39189387 | None:intergenic | 50.0% | |
| ACTGCTAAAGCCCCGGTATT+TGG | + | chr8_1:39189486-39189505 | None:intergenic | 50.0% | |
| AGTTGATCAGTTGGGGATCG+TGG | + | chr8_1:39189592-39189611 | None:intergenic | 50.0% | |
| !! | GGGGATGAGTTGATCAGTTG+GGG | + | chr8_1:39189599-39189618 | None:intergenic | 50.0% |
| GAAAGCAGAAAGGAGTGACC+AGG | + | chr8_1:39189672-39189691 | None:intergenic | 50.0% | |
| TGCTGCTCAAGTTATGGCTC+AGG | - | chr8_1:39189911-39189930 | Msa1193050:intron | 50.0% | |
| ! | CAGTTAGTCTGGGAAGGACT+TGG | - | chr8_1:39190089-39190108 | Msa1193050:intron | 50.0% |
| AAGGACTTGGACTTGGAGGA+GGG | - | chr8_1:39190102-39190121 | Msa1193050:intron | 50.0% | |
| !! | GTGGTGGACATTATGTGCCT+CGG | - | chr8_1:39190813-39190832 | Msa1193050:CDS | 50.0% |
| !! | TGGGTTGGTCACCTACTTTC+TGG | - | chr8_1:39191221-39191240 | Msa1193050:intron | 50.0% |
| TGGCAGAAGAATGCCATCAC+AGG | - | chr8_1:39191629-39191648 | Msa1193050:CDS | 50.0% | |
| !! | TGGCTAAGAGGGCATTGGCA+GGG | + | chr8_1:39187278-39187297 | None:intergenic | 55.0% |
| !! | ATGGCTAAGAGGGCATTGGC+AGG | + | chr8_1:39187279-39187298 | None:intergenic | 55.0% |
| ! | AGGCATGGCTAAGAGGGCAT+TGG | + | chr8_1:39187283-39187302 | None:intergenic | 55.0% |
| AATGCCCTCTTAGCCATGCC+TGG | - | chr8_1:39187282-39187301 | Msa1193050:three_prime_UTR | 55.0% | |
| TGAACCTGGAAATGGGGTCC+GGG | + | chr8_1:39187315-39187334 | None:intergenic | 55.0% | |
| ATTGAAGGCGGTCTGGTGTC+TGG | + | chr8_1:39187800-39187819 | None:intergenic | 55.0% | |
| AGAGCACACTGCACACACAC+GGG | + | chr8_1:39188004-39188023 | None:intergenic | 55.0% | |
| GGTGATGTTCCACCTCAAGG+TGG | - | chr8_1:39188256-39188275 | Msa1193050:intron | 55.0% | |
| CATCCAGGTTTCCCACCTTG+AGG | + | chr8_1:39188271-39188290 | None:intergenic | 55.0% | |
| CTCAAGGTGGGAAACCTGGA+TGG | - | chr8_1:39188269-39188288 | Msa1193050:intron | 55.0% | |
| ! | ACTCTGGAGGCCACTCATCA+TGG | - | chr8_1:39188806-39188825 | Msa1193050:intron | 55.0% |
| CTGGTTAAGGGGGTAGAGTG+AGG | + | chr8_1:39189372-39189391 | None:intergenic | 55.0% | |
| TCGTGGAACTGCTAAAGCCC+CGG | + | chr8_1:39189493-39189512 | None:intergenic | 55.0% | |
| ! | TCGGGGCTTTAGCACAGTAG+TGG | - | chr8_1:39189544-39189563 | Msa1193050:intron | 55.0% |
| GTCTGGGAAGGACTTGGACT+TGG | - | chr8_1:39190095-39190114 | Msa1193050:intron | 55.0% | |
| TGGGAAGGACTTGGACTTGG+AGG | - | chr8_1:39190098-39190117 | Msa1193050:intron | 55.0% | |
| GAAGGACTTGGACTTGGAGG+AGG | - | chr8_1:39190101-39190120 | Msa1193050:intron | 55.0% | |
| CTTGGAGGAGGGACTGATGT+CGG | - | chr8_1:39190113-39190132 | Msa1193050:intron | 55.0% | |
| GAGGGACTGATGTCGGAAAC+TGG | - | chr8_1:39190120-39190139 | Msa1193050:intron | 55.0% | |
| CTGATGTCGGAAACTGGAGC+AGG | - | chr8_1:39190126-39190145 | Msa1193050:intron | 55.0% | |
| GTCCTTCTTGGGATAGGTGG+TGG | - | chr8_1:39190797-39190816 | Msa1193050:CDS | 55.0% | |
| GTCCACCACCTATCCCAAGA+AGG | + | chr8_1:39190802-39190821 | None:intergenic | 55.0% | |
| ACTGCAGGAGTTTCAAGGGC+TGG | - | chr8_1:39191609-39191628 | Msa1193050:CDS | 55.0% | |
| TGCCATCACAGGATTCCTCG+CGG | - | chr8_1:39191640-39191659 | Msa1193050:CDS | 55.0% | |
| !! | GAAAAAAGGGGTGGCGGGAG+TGG | + | chr8_1:39187137-39187156 | None:intergenic | 60.0% |
| CCAGCCAGGCATGGCTAAGA+GGG | + | chr8_1:39187289-39187308 | None:intergenic | 60.0% | |
| CCAGGTTTCCCACCTTGAGG+TGG | + | chr8_1:39188268-39188287 | None:intergenic | 60.0% | |
| CCACCTCAAGGTGGGAAACC+TGG | - | chr8_1:39188265-39188284 | Msa1193050:intron | 60.0% | |
| TTCGGCAATGCTGCCCATCC+AGG | + | chr8_1:39188286-39188305 | None:intergenic | 60.0% | |
| GGGCAGCATTGCCGAATCCT+AGG | - | chr8_1:39188290-39188309 | Msa1193050:CDS | 60.0% | |
| CTCCGCGAGGAATCCTGTGA+TGG | + | chr8_1:39191645-39191664 | None:intergenic | 60.0% | |
| CCCTCTTAGCCATGCCTGGC+TGG | - | chr8_1:39187286-39187305 | Msa1193050:three_prime_UTR | 65.0% | |
| GCCAGCCAGGCATGGCTAAG+AGG | + | chr8_1:39187290-39187309 | None:intergenic | 65.0% | |
| GCAACCCGGACCCCATTTCC+AGG | - | chr8_1:39187308-39187327 | Msa1193050:three_prime_UTR | 65.0% | |
| GCCATGCCTGGCTGGCAACC+CGG | - | chr8_1:39187294-39187313 | Msa1193050:three_prime_UTR | 70.0% | |
| TCCGGGTTGCCAGCCAGGCA+TGG | + | chr8_1:39187298-39187317 | None:intergenic | 70.0% | |
| TGGGGTCCGGGTTGCCAGCC+AGG | + | chr8_1:39187303-39187322 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 39187049 | 39192081 | 39187049 | ID=Msa1193050;Name=Msa1193050 |
| chr8_1 | mRNA | 39187049 | 39192081 | 39187049 | ID=Msa1193050-mRNA-1;Parent=Msa1193050;Name=Msa1193050-mRNA-1;_AED=0.10;_eAED=0.10;_QI=44|1|1|1|1|1|9|378|358 |
| chr8_1 | exon | 39187049 | 39187514 | 39187049 | ID=Msa1193050-mRNA-1:exon:12839;Parent=Msa1193050-mRNA-1 |
| chr8_1 | exon | 39187746 | 39187922 | 39187746 | ID=Msa1193050-mRNA-1:exon:12838;Parent=Msa1193050-mRNA-1 |
| chr8_1 | exon | 39188278 | 39188352 | 39188278 | ID=Msa1193050-mRNA-1:exon:12837;Parent=Msa1193050-mRNA-1 |
| chr8_1 | exon | 39188983 | 39189038 | 39188983 | ID=Msa1193050-mRNA-1:exon:12836;Parent=Msa1193050-mRNA-1 |
| chr8_1 | exon | 39189198 | 39189250 | 39189198 | ID=Msa1193050-mRNA-1:exon:12835;Parent=Msa1193050-mRNA-1 |
| chr8_1 | exon | 39190264 | 39190327 | 39190264 | ID=Msa1193050-mRNA-1:exon:12834;Parent=Msa1193050-mRNA-1 |
| chr8_1 | exon | 39190752 | 39190894 | 39190752 | ID=Msa1193050-mRNA-1:exon:12833;Parent=Msa1193050-mRNA-1 |
| chr8_1 | exon | 39191515 | 39191698 | 39191515 | ID=Msa1193050-mRNA-1:exon:12832;Parent=Msa1193050-mRNA-1 |
| chr8_1 | exon | 39191801 | 39192081 | 39191801 | ID=Msa1193050-mRNA-1:exon:12831;Parent=Msa1193050-mRNA-1 |
| chr8_1 | five_prime_UTR | 39192038 | 39192081 | 39192038 | ID=Msa1193050-mRNA-1:five_prime_utr;Parent=Msa1193050-mRNA-1 |
| chr8_1 | CDS | 39191801 | 39192037 | 39191801 | ID=Msa1193050-mRNA-1:cds;Parent=Msa1193050-mRNA-1 |
| chr8_1 | CDS | 39191515 | 39191698 | 39191515 | ID=Msa1193050-mRNA-1:cds;Parent=Msa1193050-mRNA-1 |
| chr8_1 | CDS | 39190752 | 39190894 | 39190752 | ID=Msa1193050-mRNA-1:cds;Parent=Msa1193050-mRNA-1 |
| chr8_1 | CDS | 39190264 | 39190327 | 39190264 | ID=Msa1193050-mRNA-1:cds;Parent=Msa1193050-mRNA-1 |
| chr8_1 | CDS | 39189198 | 39189250 | 39189198 | ID=Msa1193050-mRNA-1:cds;Parent=Msa1193050-mRNA-1 |
| chr8_1 | CDS | 39188983 | 39189038 | 39188983 | ID=Msa1193050-mRNA-1:cds;Parent=Msa1193050-mRNA-1 |
| chr8_1 | CDS | 39188278 | 39188352 | 39188278 | ID=Msa1193050-mRNA-1:cds;Parent=Msa1193050-mRNA-1 |
| chr8_1 | CDS | 39187746 | 39187922 | 39187746 | ID=Msa1193050-mRNA-1:cds;Parent=Msa1193050-mRNA-1 |
| chr8_1 | CDS | 39187427 | 39187514 | 39187427 | ID=Msa1193050-mRNA-1:cds;Parent=Msa1193050-mRNA-1 |
| chr8_1 | three_prime_UTR | 39187049 | 39187426 | 39187049 | ID=Msa1193050-mRNA-1:three_prime_utr;Parent=Msa1193050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
