Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1250990 | XP_003628728.3 | 93.056 | 360 | 23 | 1 | 1 | 360 | 1 | 358 | 0.0 | 673 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1250990 | sp|Q9ZPQ3|GEK1_ARATH | 74.051 | 316 | 78 | 1 | 48 | 359 | 1 | 316 | 1.90e-173 | 488 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1250990 | A0A396GML3 | 93.056 | 360 | 23 | 1 | 1 | 360 | 1 | 358 | 0.0 | 673 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1193050 | Msa1250990 | 0.834903 | 2.289950e-56 | -8.615850e-47 |
| Msa1197490 | Msa1250990 | 0.953098 | 5.784343e-111 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1250990 | MtrunA17_Chr8g0366111 | 93.056 | 360 | 23 | 1 | 1 | 360 | 1 | 358 | 0.0 | 673 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1250990 | AT2G03800.2 | 68.678 | 348 | 101 | 2 | 20 | 359 | 13 | 360 | 1.37e-174 | 489 |
| Msa1250990 | AT2G03800.1 | 74.051 | 316 | 78 | 1 | 48 | 359 | 1 | 316 | 1.93e-174 | 488 |
Find 115 sgRNAs with CRISPR-Local
Find 316 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCACATTTGTTTCTCCTTT+TGG | 0.133900 | 8_2:+46667432 | None:intergenic |
| TATAGTGGTGGAAGATTATT+TGG | 0.167588 | 8_2:-46671222 | Msa1250990:CDS |
| GACACTCAAAAGAAGTTATT+TGG | 0.171593 | 8_2:+46667011 | None:intergenic |
| TGGGTTGGTCACCTACTTTC+TGG | 0.174476 | 8_2:-46667477 | Msa1250990:CDS |
| CATACATTTATTATCAATCT+AGG | 0.231253 | 8_2:+46666710 | None:intergenic |
| TATGTTCCTATGTATTTATT+TGG | 0.233322 | 8_2:-46666743 | Msa1250990:three_prime_UTR |
| GCGGAGCAGAATATTAAAAT+TGG | 0.268594 | 8_2:-46667038 | Msa1250990:CDS |
| TTGGATTCGTTCAGTTAGTC+TGG | 0.301378 | 8_2:-46668621 | Msa1250990:intron |
| CAGTCTGATCCCTGAGTTTG+AGG | 0.317256 | 8_2:-46670344 | Msa1250990:intron |
| TCACCTACTTTCTGGATATT+CGG | 0.318220 | 8_2:-46667469 | Msa1250990:CDS |
| AAATAAGCCAACTATGTTTC+TGG | 0.319387 | 8_2:-46669863 | Msa1250990:CDS |
| ATCTAAGGCTGCTGCGGTTT+AGG | 0.321809 | 8_2:+46671560 | None:intergenic |
| AATATAGGAAAGATGGTGTT+TGG | 0.321846 | 8_2:-46667497 | Msa1250990:intron |
| GCAACCCGGACCCCATTTCC+AGG | 0.353692 | 8_2:-46671404 | Msa1250990:intron |
| CCCTCTTAGCCATGCCTGGC+TGG | 0.355358 | 8_2:-46671426 | Msa1250990:CDS |
| GATAAGAAGAAAGTCCTTCT+TGG | 0.358937 | 8_2:-46667913 | Msa1250990:CDS |
| CCAACTATGTTTCTGGAGAT+TGG | 0.370534 | 8_2:-46669856 | Msa1250990:intron |
| GAGGGACTGATGTCGGAAAC+TGG | 0.381603 | 8_2:-46668579 | Msa1250990:CDS |
| CAGTTAGTCTGGGAAGGACT+TGG | 0.381874 | 8_2:-46668610 | Msa1250990:CDS |
| GAGTAAGGCACCTCAAACTC+AGG | 0.385327 | 8_2:+46670334 | None:intergenic |
| ACATTATGTGCCTCGGCATA+TGG | 0.385428 | 8_2:-46667878 | Msa1250990:CDS |
| GCTCTCACTGTTCACCCTAT+TGG | 0.390767 | 8_2:-46671116 | Msa1250990:intron |
| TAATATGAATTTATTTGCCT+TGG | 0.392261 | 8_2:-46666681 | Msa1250990:three_prime_UTR |
| TTGAACCTGGAAATGGGGTC+CGG | 0.403605 | 8_2:+46671399 | None:intergenic |
| ACAAGGTGGGAAGAGGTTAC+TGG | 0.414639 | 8_2:-46671197 | Msa1250990:CDS |
| GGGTTGAGAGTGTTACTTCA+TGG | 0.417052 | 8_2:-46671251 | Msa1250990:CDS |
| AATTTACTGCAGGAGTTTCA+AGG | 0.417491 | 8_2:-46667093 | Msa1250990:intron |
| GTCTGGGAAGGACTTGGACT+TGG | 0.418424 | 8_2:-46668604 | Msa1250990:CDS |
| AATGCCCTCTTAGCCATGCC+TGG | 0.423510 | 8_2:-46671430 | Msa1250990:CDS |
| ATAGTTGGCTTATTTGTCAA+TGG | 0.432303 | 8_2:+46669871 | None:intergenic |
| GTCTATAAAAGCTGCATATG+AGG | 0.434564 | 8_2:-46667388 | Msa1250990:CDS |
| CCACCTCAAGGTGGGAAACC+TGG | 0.443476 | 8_2:-46670436 | Msa1250990:CDS |
| GGAGAAACAAATGTGGAGAT+TGG | 0.443599 | 8_2:-46667426 | Msa1250990:CDS |
| AGAAGATGAAATTACCAATA+GGG | 0.451407 | 8_2:+46671102 | None:intergenic |
| ATAAGAAGAAAGTCCTTCTT+GGG | 0.451631 | 8_2:-46667912 | Msa1250990:CDS |
| TGGGAAGGACTTGGACTTGG+AGG | 0.457377 | 8_2:-46668601 | Msa1250990:CDS |
| TTCCTCAATTTAGATTACTC+TGG | 0.461039 | 8_2:-46669911 | Msa1250990:intron |
| GTTGTACATGACATGTTACT+TGG | 0.462919 | 8_2:-46671637 | Msa1250990:exon |
| ACAAGATGCTGCTCAAGTTA+TGG | 0.465443 | 8_2:-46668794 | Msa1250990:CDS |
| CGTATCCAAGGTCCAATCCT+AGG | 0.470362 | 8_2:+46670394 | None:intergenic |
| ATGGCTAAGAGGGCATTGGC+AGG | 0.471091 | 8_2:+46671436 | None:intergenic |
| CAAGGTCCAATCCTAGGATT+CGG | 0.473623 | 8_2:+46670400 | None:intergenic |
| GAAGGACTTGGACTTGGAGG+AGG | 0.478522 | 8_2:-46668598 | Msa1250990:CDS |
| GGGCAGCATTGCCGAATCCT+AGG | 0.481352 | 8_2:-46670411 | Msa1250990:CDS |
| TGGAAGATTATTTGGATACA+AGG | 0.483917 | 8_2:-46671214 | Msa1250990:CDS |
| CCAGCCAGGCATGGCTAAGA+GGG | 0.491015 | 8_2:+46671426 | None:intergenic |
| AGGAAAGATGGTGTTTGGGT+TGG | 0.495625 | 8_2:-46667492 | Msa1250990:CDS |
| TTCTGGATATTCGGTGCCAA+TGG | 0.497093 | 8_2:-46667460 | Msa1250990:CDS |
| TTCGGCAATGCTGCCCATCC+AGG | 0.498257 | 8_2:+46670418 | None:intergenic |
| TGAACCTGGAAATGGGGTCC+GGG | 0.500138 | 8_2:+46671400 | None:intergenic |
| ATATAGGAAAGATGGTGTTT+GGG | 0.501627 | 8_2:-46667496 | Msa1250990:intron |
| TTGGCAGGGTTGATTGAAGC+AGG | 0.506215 | 8_2:+46671451 | None:intergenic |
| GTCCTTCTTGGGATAGGTGG+TGG | 0.506343 | 8_2:-46667901 | Msa1250990:CDS |
| TGCTGCTCAAGTTATGGCTC+AGG | 0.509122 | 8_2:-46668788 | Msa1250990:intron |
| ATTTACTGCAGGAGTTTCAA+GGG | 0.511764 | 8_2:-46667092 | Msa1250990:intron |
| TTTGGATACAAGGTGGGAAG+AGG | 0.512434 | 8_2:-46671204 | Msa1250990:CDS |
| TAGGTAGTACTGAAGACTAC+TGG | 0.514107 | 8_2:-46668822 | Msa1250990:CDS |
| ATACATTTATTATCAATCTA+GGG | 0.514210 | 8_2:+46666711 | None:intergenic |
| ACTCTGGAGGCCACTCATCA+TGG | 0.517171 | 8_2:-46669895 | Msa1250990:CDS |
| ATGTGGAGATTGGAGGAACT+TGG | 0.519523 | 8_2:-46667416 | Msa1250990:CDS |
| TGGCAGAAGAATGCCATCAC+AGG | 0.525499 | 8_2:-46667068 | Msa1250990:CDS |
| TGGCGGGAGTGGTTTAGTAT+TGG | 0.525717 | 8_2:+46671595 | None:intergenic |
| AGGCATGGCTAAGAGGGCAT+TGG | 0.527431 | 8_2:+46671432 | None:intergenic |
| CTCAAGGTGGGAAACCTGGA+TGG | 0.530408 | 8_2:-46670432 | Msa1250990:CDS |
| GGAGTGGTTTAGTATTGGAC+AGG | 0.530767 | 8_2:+46671600 | None:intergenic |
| AAGAAAGTCCTTCTTGGGAT+AGG | 0.531260 | 8_2:-46667907 | Msa1250990:CDS |
| GGTTGAGAGTGTTACTTCAT+GGG | 0.531477 | 8_2:-46671250 | Msa1250990:CDS |
| CTCAATTTAGATTACTCTGG+AGG | 0.532249 | 8_2:-46669908 | Msa1250990:intron |
| AGATTATTTGGATACAAGGT+GGG | 0.534032 | 8_2:-46671210 | Msa1250990:CDS |
| CCAATCTCCAGAAACATAGT+TGG | 0.538972 | 8_2:+46669856 | None:intergenic |
| TTTGGTTGAACCTGGAAATG+GGG | 0.542428 | 8_2:+46671394 | None:intergenic |
| CATCCAGGTTTCCCACCTTG+AGG | 0.543026 | 8_2:+46670433 | None:intergenic |
| TGGATTCGTTCAGTTAGTCT+GGG | 0.543480 | 8_2:-46668620 | Msa1250990:intron |
| ACTGCAGGAGTTTCAAGGGC+TGG | 0.545446 | 8_2:-46667088 | Msa1250990:intron |
| TTCGTTCAGTTAGTCTGGGA+AGG | 0.551066 | 8_2:-46668616 | Msa1250990:intron |
| GCATTGCCGAATCCTAGGAT+TGG | 0.555307 | 8_2:-46670406 | Msa1250990:CDS |
| ACTTCATGGGAAGAGTATAG+TGG | 0.562543 | 8_2:-46671237 | Msa1250990:CDS |
| AATTCGCCAAATAAATACAT+AGG | 0.564283 | 8_2:+46666737 | None:intergenic |
| TTGGATGATGATGATGAAGA+TGG | 0.565747 | 8_2:+46671506 | None:intergenic |
| CTCCGCGAGGAATCCTGTGA+TGG | 0.566946 | 8_2:+46667055 | None:intergenic |
| CTTGGAGGAGGGACTGATGT+CGG | 0.567295 | 8_2:-46668586 | Msa1250990:CDS |
| TGTGCAATAATTTCGCCACC+AGG | 0.572204 | 8_2:+46667348 | None:intergenic |
| AGGGTTGATTGAAGCAGGAT+CGG | 0.574754 | 8_2:+46671456 | None:intergenic |
| CCAGGTTTCCCACCTTGAGG+TGG | 0.575933 | 8_2:+46670436 | None:intergenic |
| AAGGACTTGGACTTGGAGGA+GGG | 0.577258 | 8_2:-46668597 | Msa1250990:CDS |
| GCAACAATTGTCTTTCATCA+CGG | 0.578990 | 8_2:+46671662 | None:intergenic |
| GCACCGAATATCCAGAAAGT+AGG | 0.580008 | 8_2:+46667466 | None:intergenic |
| CTTTCACTCAAATATTGCCA+AGG | 0.581283 | 8_2:+46666664 | None:intergenic |
| GGAGTTCCACATTTGCGTGA+AGG | 0.582715 | 8_2:-46670466 | Msa1250990:CDS |
| GAAACAAATGTGGAGATTGG+AGG | 0.582932 | 8_2:-46667423 | Msa1250990:CDS |
| GTGCCAATGGAAGATCCAAA+AGG | 0.584393 | 8_2:-46667447 | Msa1250990:CDS |
| ATGATGATGAAGATGGTTTG+AGG | 0.584796 | 8_2:+46671513 | None:intergenic |
| AAAGTCCTTCTTGGGATAGG+TGG | 0.587842 | 8_2:-46667904 | Msa1250990:CDS |
| AAGATTATTTGGATACAAGG+TGG | 0.591901 | 8_2:-46671211 | Msa1250990:CDS |
| ACATCACCTTCACGCAAATG+TGG | 0.592124 | 8_2:+46670460 | None:intergenic |
| TGGCTAAGAGGGCATTGGCA+GGG | 0.593618 | 8_2:+46671437 | None:intergenic |
| GTGGTGGACATTATGTGCCT+CGG | 0.594821 | 8_2:-46667885 | Msa1250990:CDS |
| CTGATGTCGGAAACTGGAGC+AGG | 0.596002 | 8_2:-46668573 | Msa1250990:intron |
| AATGTGCAGATTGCAGACAT+AGG | 0.599856 | 8_2:-46666959 | Msa1250990:three_prime_UTR |
| CGAATCCTAGGATTGGACCT+TGG | 0.608468 | 8_2:-46670399 | Msa1250990:CDS |
| GAAGGTGATGTTCCACCTCA+AGG | 0.608473 | 8_2:-46670448 | Msa1250990:CDS |
| ATAGGGTGAACAGTGAGAGC+AGG | 0.610959 | 8_2:+46671119 | None:intergenic |
| TCTTCATCATCATCATCCAA+TGG | 0.620969 | 8_2:-46671503 | Msa1250990:CDS |
| GTGATGTTCCACCTCAAGGT+GGG | 0.625555 | 8_2:-46670444 | Msa1250990:CDS |
| TCAAGGTGGGAAACCTGGAT+GGG | 0.628133 | 8_2:-46670431 | Msa1250990:CDS |
| GTCCACCACCTATCCCAAGA+AGG | 0.636477 | 8_2:+46667899 | None:intergenic |
| TTGATGATCTAAGGCTGCTG+CGG | 0.636578 | 8_2:+46671554 | None:intergenic |
| TCCAAAAGGAGAAACAAATG+TGG | 0.637066 | 8_2:-46667433 | Msa1250990:CDS |
| AGTAAGGCACCTCAAACTCA+GGG | 0.641613 | 8_2:+46670335 | None:intergenic |
| GCAACGAGAAGAGACACCAT+TGG | 0.644130 | 8_2:+46671487 | None:intergenic |
| TCATGGGAAGAGTATAGTGG+TGG | 0.644528 | 8_2:-46671234 | Msa1250990:CDS |
| AACACTATATCCATATGCCG+AGG | 0.673664 | 8_2:+46667868 | None:intergenic |
| GGTGATGTTCCACCTCAAGG+TGG | 0.677793 | 8_2:-46670445 | Msa1250990:CDS |
| TGTCAATGGTCCATGATGAG+TGG | 0.698185 | 8_2:+46669885 | None:intergenic |
| TGCCATCACAGGATTCCTCG+CGG | 0.720531 | 8_2:-46667057 | Msa1250990:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATAAAGTAAAAAATATG+TGG | + | chr8_2:46669360-46669379 | None:intergenic | 10.0% |
| !!! | TTTTCATTTTTTTTTATTCA+AGG | + | chr8_2:46670767-46670786 | None:intergenic | 10.0% |
| !! | AAAAAAAAAGAAAGGAAAAA+GGG | + | chr8_2:46666938-46666957 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAGAAAGGAAAA+AGG | + | chr8_2:46666939-46666958 | None:intergenic | 15.0% |
| !!! | ATTTTTTTGTTGTTTTTTGT+TGG | - | chr8_2:46666982-46667001 | Msa1250990:three_prime_UTR | 15.0% |
| !!! | TTTTTTTGTTGTTTTTTGTT+GGG | - | chr8_2:46666983-46667002 | Msa1250990:three_prime_UTR | 15.0% |
| !! | AAAAAGTAAGTAAAGTTTAT+AGG | - | chr8_2:46667555-46667574 | Msa1250990:intron | 15.0% |
| !! | AAAAGTAAGTAAAGTTTATA+GGG | - | chr8_2:46667556-46667575 | Msa1250990:intron | 15.0% |
| !!! | AAACATATATAACATTTTTC+CGG | - | chr8_2:46667584-46667603 | Msa1250990:intron | 15.0% |
| !! | TAATTTAATTCCAATTTGAA+CGG | - | chr8_2:46668012-46668031 | Msa1250990:intron | 15.0% |
| !!! | AAATATTATTTAAAAGCGTA+TGG | + | chr8_2:46669950-46669969 | None:intergenic | 15.0% |
| !!! | TTTGATTTTATTTTATCTTC+AGG | - | chr8_2:46670182-46670201 | Msa1250990:intron | 15.0% |
| !!! | AAATTTTCATCAATTTTAGA+AGG | + | chr8_2:46670327-46670346 | None:intergenic | 15.0% |
| !!! | ATTGATGAAAATTTTCTAAA+CGG | - | chr8_2:46670333-46670352 | Msa1250990:intron | 15.0% |
| !!! | TTATAATTGAATTTTCTGAT+TGG | - | chr8_2:46670480-46670499 | Msa1250990:intron | 15.0% |
| !!! | TTTTAGAGATTTTTAATAGA+AGG | - | chr8_2:46671442-46671461 | Msa1250990:CDS | 15.0% |
| !! | ATACATTTATTATCAATCTA+GGG | + | chr8_2:46671595-46671614 | None:intergenic | 15.0% |
| !! | AAAAAAAAGAAAGGAAAAAG+GGG | + | chr8_2:46666937-46666956 | None:intergenic | 20.0% |
| !! | ATGAAGGAAAAAAAAAAGAA+AGG | + | chr8_2:46666946-46666965 | None:intergenic | 20.0% |
| !! | CAATAAATTGAGAAAAATGA+AGG | + | chr8_2:46666962-46666981 | None:intergenic | 20.0% |
| !!! | TTTTTTGTTGTTTTTTGTTG+GGG | - | chr8_2:46666984-46667003 | Msa1250990:three_prime_UTR | 20.0% |
| !!! | TTAAAATCTTGTGTTTTTGT+AGG | - | chr8_2:46667816-46667835 | Msa1250990:intron | 20.0% |
| !! | AATTTAATTCCAATTTGAAC+GGG | - | chr8_2:46668013-46668032 | Msa1250990:intron | 20.0% |
| !! | GCTTAATATATTATGTTACA+TGG | - | chr8_2:46668200-46668219 | Msa1250990:intron | 20.0% |
| !!! | TATCAATCTAAAATACATCT+AGG | + | chr8_2:46668492-46668511 | None:intergenic | 20.0% |
| !! | ATCTGAAAACAAAATAATGA+AGG | + | chr8_2:46668605-46668624 | None:intergenic | 20.0% |
| !! | AAGATGAATATGAATTGAAA+AGG | + | chr8_2:46668658-46668677 | None:intergenic | 20.0% |
| !! | TATTGAAAACCAACAAAATA+TGG | + | chr8_2:46668719-46668738 | None:intergenic | 20.0% |
| !! | TTTACTGAAATGATATTGTT+TGG | - | chr8_2:46669663-46669682 | Msa1250990:intron | 20.0% |
| !!! | GAAAATATTTTGTTGTTAGT+TGG | - | chr8_2:46669770-46669789 | Msa1250990:intron | 20.0% |
| !! | ATGAACTAATTTGAGAAAAT+AGG | - | chr8_2:46669989-46670008 | Msa1250990:intron | 20.0% |
| !! | TGAACTAATTTGAGAAAATA+GGG | - | chr8_2:46669990-46670009 | Msa1250990:intron | 20.0% |
| !! | CAATTATAAAGTCACTAAAA+TGG | + | chr8_2:46670469-46670488 | None:intergenic | 20.0% |
| !! | TATGTTCCTATGTATTTATT+TGG | - | chr8_2:46671560-46671579 | Msa1250990:CDS | 20.0% |
| !! | CATACATTTATTATCAATCT+AGG | + | chr8_2:46671596-46671615 | None:intergenic | 20.0% |
| !! | TAATATGAATTTATTTGCCT+TGG | - | chr8_2:46671622-46671641 | Msa1250990:CDS | 20.0% |
| !!! | AAAGTGATTTTGATGATCTA+AGG | + | chr8_2:46666761-46666780 | None:intergenic | 25.0% |
| !!! | ATGAAAAGTTTTGTGAATGA+AGG | - | chr8_2:46667031-46667050 | Msa1250990:CDS | 25.0% |
| !!! | TGAAAAGTTTTGTGAATGAA+GGG | - | chr8_2:46667032-46667051 | Msa1250990:CDS | 25.0% |
| ! | AGAAGATGAAATTACCAATA+GGG | + | chr8_2:46667204-46667223 | None:intergenic | 25.0% |
| ! | ATATCTAATTGTCTACATGT+CGG | + | chr8_2:46667324-46667343 | None:intergenic | 25.0% |
| !! | TAGTTTCTGTCCAAATTTTT+CGG | - | chr8_2:46667468-46667487 | Msa1250990:CDS | 25.0% |
| !!! | AATACTAAAAAGTTGGTACA+AGG | - | chr8_2:46667518-46667537 | Msa1250990:intron | 25.0% |
| ! | AAATCATTAAACAACCCAAA+TGG | - | chr8_2:46667776-46667795 | Msa1250990:intron | 25.0% |
| ! | AGAAACATAAGAAAAGAGTA+AGG | + | chr8_2:46667987-46668006 | None:intergenic | 25.0% |
| ! | AGATAAAACTAGAACACAAA+AGG | + | chr8_2:46668111-46668130 | None:intergenic | 25.0% |
| !! | TGAATATTTCTGCAAATACA+TGG | - | chr8_2:46668153-46668172 | Msa1250990:intron | 25.0% |
| ! | ATGCAATATGCTTATAATAG+AGG | + | chr8_2:46668527-46668546 | None:intergenic | 25.0% |
| ! | TCAATACGAAATGAGATATT+AGG | - | chr8_2:46668733-46668752 | Msa1250990:intron | 25.0% |
| !! | TGTTAGTGCTCAATTTTTAT+TGG | - | chr8_2:46668903-46668922 | Msa1250990:intron | 25.0% |
| ! | TTGTCAAATAGTGACTATAA+CGG | - | chr8_2:46668996-46669015 | Msa1250990:intron | 25.0% |
| ! | TTATACTAAATACCATATCG+TGG | + | chr8_2:46669061-46669080 | None:intergenic | 25.0% |
| !! | TATAAAGTGTTACCAAATAC+CGG | - | chr8_2:46669076-46669095 | Msa1250990:intron | 25.0% |
| ! | TTATACTAAATACCATATCG+TGG | + | chr8_2:46669061-46669080 | None:intergenic | 25.0% |
| !! | TATAAAGTGTTACCAAATAC+CGG | - | chr8_2:46669076-46669095 | Msa1250990:intron | 25.0% |
| !! | TCAAACAAAAGTGATAATGT+TGG | + | chr8_2:46669251-46669270 | None:intergenic | 25.0% |
| !!! | ATTTCATCTTTTGAAACAGA+TGG | + | chr8_2:46669868-46669887 | None:intergenic | 25.0% |
| !!! | TTTTGAAATTTTGACCTTGA+TGG | - | chr8_2:46669909-46669928 | Msa1250990:intron | 25.0% |
| !! | ATTATTTAAAAGCGTATGGA+AGG | + | chr8_2:46669946-46669965 | None:intergenic | 25.0% |
| ! | AAGTACTTATGTCAATAGAT+GGG | + | chr8_2:46670061-46670080 | None:intergenic | 25.0% |
| ! | TGCACACTTAAATAGATTAT+GGG | - | chr8_2:46670518-46670537 | Msa1250990:intron | 25.0% |
| ! | AATTACATTGATGAACAACA+TGG | - | chr8_2:46670545-46670564 | Msa1250990:intron | 25.0% |
| ! | ATTACATTGATGAACAACAT+GGG | - | chr8_2:46670546-46670565 | Msa1250990:intron | 25.0% |
| ! | TTAGAACTCAAGACTAAAAA+AGG | + | chr8_2:46670685-46670704 | None:intergenic | 25.0% |
| !! | TTTTTGCAATATAGGAAAGA+TGG | - | chr8_2:46670799-46670818 | Msa1250990:intron | 25.0% |
| !! | TACGATTTGAAACAGATAAT+AGG | - | chr8_2:46671144-46671163 | Msa1250990:CDS | 25.0% |
| !!! | AATCACTTTTAATGCAAATC+TGG | + | chr8_2:46671394-46671413 | None:intergenic | 25.0% |
| !! | CTCTATTAGAGATAATTTTC+AGG | - | chr8_2:46671512-46671531 | Msa1250990:CDS | 25.0% |
| ! | AATTCGCCAAATAAATACAT+AGG | + | chr8_2:46671569-46671588 | None:intergenic | 25.0% |
| ! | GGGGTGTTTATAATGAATTT+AGG | - | chr8_2:46667003-46667022 | Msa1250990:exon | 30.0% |
| ! | TATAGTGGTGGAAGATTATT+TGG | - | chr8_2:46667081-46667100 | Msa1250990:CDS | 30.0% |
| TGGAAGATTATTTGGATACA+AGG | - | chr8_2:46667089-46667108 | Msa1250990:intron | 30.0% | |
| AAGATTATTTGGATACAAGG+TGG | - | chr8_2:46667092-46667111 | Msa1250990:intron | 30.0% | |
| AGATTATTTGGATACAAGGT+GGG | - | chr8_2:46667093-46667112 | Msa1250990:intron | 30.0% | |
| GAGAAGATGAAATTACCAAT+AGG | + | chr8_2:46667205-46667224 | None:intergenic | 30.0% | |
| ! | TCGCAATTTTTGAATTCGAA+TGG | + | chr8_2:46667495-46667514 | None:intergenic | 30.0% |
| GCGACTAAATACTAAAAAGT+TGG | - | chr8_2:46667511-46667530 | Msa1250990:intron | 30.0% | |
| !! | GTGTTTGGTAATGATATGTT+AGG | - | chr8_2:46667643-46667662 | Msa1250990:intron | 30.0% |
| TGTGTGAATGTTGTAAACTT+TGG | - | chr8_2:46667745-46667764 | Msa1250990:intron | 30.0% | |
| GTGTGAATGTTGTAAACTTT+GGG | - | chr8_2:46667746-46667765 | Msa1250990:intron | 30.0% | |
| TGTGAATGTTGTAAACTTTG+GGG | - | chr8_2:46667747-46667766 | Msa1250990:intron | 30.0% | |
| ! | ACTTCTGAAAAATATTGCTC+AGG | - | chr8_2:46667932-46667951 | Msa1250990:intron | 30.0% |
| AAAAGAAAACCCGTTCAAAT+TGG | + | chr8_2:46668025-46668044 | None:intergenic | 30.0% | |
| ! | CATAAAAAGTATGCAACAAG+TGG | + | chr8_2:46668369-46668388 | None:intergenic | 30.0% |
| TTCCTCAATTTAGATTACTC+TGG | - | chr8_2:46668392-46668411 | Msa1250990:intron | 30.0% | |
| ! | ATAGTTGGCTTATTTGTCAA+TGG | + | chr8_2:46668435-46668454 | None:intergenic | 30.0% |
| AAATAAGCCAACTATGTTTC+TGG | - | chr8_2:46668440-46668459 | Msa1250990:intron | 30.0% | |
| ! | CAATCTAAAATACATCTAGG+AGG | + | chr8_2:46668489-46668508 | None:intergenic | 30.0% |
| AAGAACTTAAACCATGTTCA+CGG | + | chr8_2:46668577-46668596 | None:intergenic | 30.0% | |
| AAATTACTGGAACTTTCATC+AGG | + | chr8_2:46668684-46668703 | None:intergenic | 30.0% | |
| ! | AAGAAGGTTCCATATTTTGT+TGG | - | chr8_2:46668707-46668726 | Msa1250990:intron | 30.0% |
| ! | GCTTCATTTTATTGCTCTTT+TGG | + | chr8_2:46668761-46668780 | None:intergenic | 30.0% |
| !! | GTGTTGTTTAAAATCCTGAA+TGG | + | chr8_2:46668859-46668878 | None:intergenic | 30.0% |
| ! | TATTTGACAACACTGGTTAA+GGG | + | chr8_2:46668986-46669005 | None:intergenic | 30.0% |
| ! | ATAAAGTGTTACCAAATACC+GGG | - | chr8_2:46669077-46669096 | Msa1250990:intron | 30.0% |
| ! | ATAAAGTGTTACCAAATACC+GGG | - | chr8_2:46669077-46669096 | Msa1250990:intron | 30.0% |
| CTAGAAAAACTCTACAAATG+TGG | + | chr8_2:46669307-46669326 | None:intergenic | 30.0% | |
| !!! | CTTTATTTTGAAGTAGTCTG+TGG | - | chr8_2:46669371-46669390 | Msa1250990:intron | 30.0% |
| ATTTCAGCTAGTATAACAAC+TGG | - | chr8_2:46669446-46669465 | Msa1250990:intron | 30.0% | |
| CAACTGGATAATTCTGATAT+AGG | - | chr8_2:46669462-46669481 | Msa1250990:intron | 30.0% | |
| TTCAAAATCAGAGGATCATA+TGG | + | chr8_2:46669896-46669915 | None:intergenic | 30.0% | |
| GGTCAAAATTTCAAAATCAG+AGG | + | chr8_2:46669905-46669924 | None:intergenic | 30.0% | |
| CAAGTACTTATGTCAATAGA+TGG | + | chr8_2:46670062-46670081 | None:intergenic | 30.0% | |
| TCAATGCAGAGACAATATTT+AGG | - | chr8_2:46670274-46670293 | Msa1250990:intron | 30.0% | |
| ATAAGAAGAAAGTCCTTCTT+GGG | - | chr8_2:46670391-46670410 | Msa1250990:CDS | 30.0% | |
| CTGCACACTTAAATAGATTA+TGG | - | chr8_2:46670517-46670536 | Msa1250990:intron | 30.0% | |
| !!! | TGCTTTGCTTTTTGCAATAT+AGG | - | chr8_2:46670791-46670810 | Msa1250990:intron | 30.0% |
| AATATAGGAAAGATGGTGTT+TGG | - | chr8_2:46670806-46670825 | Msa1250990:intron | 30.0% | |
| ATATAGGAAAGATGGTGTTT+GGG | - | chr8_2:46670807-46670826 | Msa1250990:intron | 30.0% | |
| TGCAAACAATTGATTACAGA+AGG | + | chr8_2:46671013-46671032 | None:intergenic | 30.0% | |
| TTTACCCTAAAATTTACTGC+AGG | - | chr8_2:46671200-46671219 | Msa1250990:CDS | 30.0% | |
| ! | AACTCCTGCAGTAAATTTTA+GGG | + | chr8_2:46671207-46671226 | None:intergenic | 30.0% |
| ! | AAACTCCTGCAGTAAATTTT+AGG | + | chr8_2:46671208-46671227 | None:intergenic | 30.0% |
| GACACTCAAAAGAAGTTATT+TGG | + | chr8_2:46671295-46671314 | None:intergenic | 30.0% | |
| !! | TAATTTTCAGGCACTTTAGA+AGG | - | chr8_2:46671524-46671543 | Msa1250990:CDS | 30.0% |
| GCAACAATTGTCTTTCATCA+CGG | + | chr8_2:46666644-46666663 | None:intergenic | 35.0% | |
| GTTGTACATGACATGTTACT+TGG | - | chr8_2:46666666-46666685 | Msa1250990:three_prime_UTR | 35.0% | |
| ! | ATGATGATGAAGATGGTTTG+AGG | + | chr8_2:46666793-46666812 | None:intergenic | 35.0% |
| ! | TTGGATGATGATGATGAAGA+TGG | + | chr8_2:46666800-46666819 | None:intergenic | 35.0% |
| TCTTCATCATCATCATCCAA+TGG | - | chr8_2:46666800-46666819 | Msa1250990:three_prime_UTR | 35.0% | |
| !! | TTTTGGTTGAACCTGGAAAT+GGG | + | chr8_2:46666913-46666932 | None:intergenic | 35.0% |
| !!! | TTTTTGGTTGAACCTGGAAA+TGG | + | chr8_2:46666914-46666933 | None:intergenic | 35.0% |
| ! | AGAAAGGAAAAAGGGGTTTT+TGG | + | chr8_2:46666930-46666949 | None:intergenic | 35.0% |
| AACCTACGAATTACGAAACA+TGG | - | chr8_2:46667273-46667292 | Msa1250990:intron | 35.0% | |
| TTGAACGTAGCTACATATGT+TGG | - | chr8_2:46667372-46667391 | Msa1250990:CDS | 35.0% | |
| TTCGAATGGACCGAAAAATT+TGG | + | chr8_2:46667481-46667500 | None:intergenic | 35.0% | |
| ! | TGAAGTGAAAAGAGTGTGTT+TGG | - | chr8_2:46667628-46667647 | Msa1250990:intron | 35.0% |
| TCATTAAACAACCCAAATGG+TGG | - | chr8_2:46667779-46667798 | Msa1250990:intron | 35.0% | |
| !! | TTTTTCAGAAGTCGTATCCA+AGG | + | chr8_2:46667924-46667943 | None:intergenic | 35.0% |
| TAACAATCAACAGGAAACTG+AGG | + | chr8_2:46668052-46668071 | None:intergenic | 35.0% | |
| CAACACAAGTAACAATCAAC+AGG | + | chr8_2:46668061-46668080 | None:intergenic | 35.0% | |
| ! | TTGTTACTTGTGTTGTGTGA+TGG | - | chr8_2:46668066-46668085 | Msa1250990:intron | 35.0% |
| TTAAGCCATCTTCCTCAAAT+GGG | + | chr8_2:46668186-46668205 | None:intergenic | 35.0% | |
| ATTAAGCCATCTTCCTCAAA+TGG | + | chr8_2:46668187-46668206 | None:intergenic | 35.0% | |
| CTCCAGAGTAATCTAAATTG+AGG | + | chr8_2:46668397-46668416 | None:intergenic | 35.0% | |
| CTCAATTTAGATTACTCTGG+AGG | - | chr8_2:46668395-46668414 | Msa1250990:intron | 35.0% | |
| CATACTTCATTTGTGCGTAA+CGG | - | chr8_2:46668808-46668827 | Msa1250990:CDS | 35.0% | |
| ATACTTCATTTGTGCGTAAC+GGG | - | chr8_2:46668809-46668828 | Msa1250990:CDS | 35.0% | |
| GAAATAGCCAACTCATCATT+TGG | - | chr8_2:46668943-46668962 | Msa1250990:intron | 35.0% | |
| ! | ATTTGACAACACTGGTTAAG+GGG | + | chr8_2:46668985-46669004 | None:intergenic | 35.0% |
| ! | CTATTTGACAACACTGGTTA+AGG | + | chr8_2:46668987-46669006 | None:intergenic | 35.0% |
| TAGTCACTATTTGACAACAC+TGG | + | chr8_2:46668993-46669012 | None:intergenic | 35.0% | |
| ! | TAAAGTGTTACCAAATACCG+GGG | - | chr8_2:46669078-46669097 | Msa1250990:intron | 35.0% |
| ! | TAAAGTGTTACCAAATACCG+GGG | - | chr8_2:46669078-46669097 | Msa1250990:intron | 35.0% |
| AGAAAGAGATATCAGGTTTG+GGG | + | chr8_2:46669222-46669241 | None:intergenic | 35.0% | |
| CAGAAAGAGATATCAGGTTT+GGG | + | chr8_2:46669223-46669242 | None:intergenic | 35.0% | |
| ACAGAAAGAGATATCAGGTT+TGG | + | chr8_2:46669224-46669243 | None:intergenic | 35.0% | |
| !! | TATCACTTTTGTTTGATGCC+TGG | - | chr8_2:46669255-46669274 | Msa1250990:intron | 35.0% |
| AAACTCTACAAATGTGGACA+TGG | + | chr8_2:46669301-46669320 | None:intergenic | 35.0% | |
| TGTTAGTTGGCATTCTTGTT+TGG | - | chr8_2:46669783-46669802 | Msa1250990:intron | 35.0% | |
| AGGAATAGTATAGTCCATCA+AGG | + | chr8_2:46669926-46669945 | None:intergenic | 35.0% | |
| TATTGACATAAGTACTTGCG+AGG | - | chr8_2:46670064-46670083 | Msa1250990:intron | 35.0% | |
| GATAAGAAGAAAGTCCTTCT+TGG | - | chr8_2:46670390-46670409 | Msa1250990:CDS | 35.0% | |
| ! | TGAATTTTCTGATTGGCGAA+AGG | - | chr8_2:46670487-46670506 | Msa1250990:intron | 35.0% |
| ! | GAATTTTCTGATTGGCGAAA+GGG | - | chr8_2:46670488-46670507 | Msa1250990:intron | 35.0% |
| AGGCTAAAGTAGTCTAACTA+AGG | + | chr8_2:46670611-46670630 | None:intergenic | 35.0% | |
| GATGTGTTGCATATGAAATG+AGG | + | chr8_2:46670631-46670650 | None:intergenic | 35.0% | |
| TCACCTACTTTCTGGATATT+CGG | - | chr8_2:46670834-46670853 | Msa1250990:intron | 35.0% | |
| TCCAAAAGGAGAAACAAATG+TGG | - | chr8_2:46670870-46670889 | Msa1250990:intron | 35.0% | |
| !! | TCCACATTTGTTTCTCCTTT+TGG | + | chr8_2:46670874-46670893 | None:intergenic | 35.0% |
| GTCTATAAAAGCTGCATATG+AGG | - | chr8_2:46670915-46670934 | Msa1250990:intron | 35.0% | |
| ! | ATGCTCGTTAAGCTTACTTT+TGG | + | chr8_2:46670987-46671006 | None:intergenic | 35.0% |
| AATTTACTGCAGGAGTTTCA+AGG | - | chr8_2:46671210-46671229 | Msa1250990:CDS | 35.0% | |
| ATTTACTGCAGGAGTTTCAA+GGG | - | chr8_2:46671211-46671230 | Msa1250990:CDS | 35.0% | |
| GCGGAGCAGAATATTAAAAT+TGG | - | chr8_2:46671265-46671284 | Msa1250990:CDS | 35.0% | |
| !!! | CTTTTGAGTGTCGATTTAAG+AGG | - | chr8_2:46671303-46671322 | Msa1250990:intron | 35.0% |
| CTTTCACTCAAATATTGCCA+AGG | + | chr8_2:46671642-46671661 | None:intergenic | 35.0% | |
| TGCGGTTTAGGTGAAAAAAG+GGG | + | chr8_2:46666734-46666753 | None:intergenic | 40.0% | |
| CTGCGGTTTAGGTGAAAAAA+GGG | + | chr8_2:46666735-46666754 | None:intergenic | 40.0% | |
| TTTGGTTGAACCTGGAAATG+GGG | + | chr8_2:46666912-46666931 | None:intergenic | 40.0% | |
| !! | GGTTGAGAGTGTTACTTCAT+GGG | - | chr8_2:46667053-46667072 | Msa1250990:CDS | 40.0% |
| ! | ACTTCATGGGAAGAGTATAG+TGG | - | chr8_2:46667066-46667085 | Msa1250990:CDS | 40.0% |
| TGCCATGTTTCGTAATTCGT+AGG | + | chr8_2:46667278-46667297 | None:intergenic | 40.0% | |
| TACGAAACATGGCATGTCAT+TGG | - | chr8_2:46667284-46667303 | Msa1250990:intron | 40.0% | |
| TCCACACTTCAAATTGAAGC+CGG | + | chr8_2:46667417-46667436 | None:intergenic | 40.0% | |
| ATTTGATGTCACCACCCAAA+TGG | - | chr8_2:46667686-46667705 | Msa1250990:intron | 40.0% | |
| CAAATCGACTGTGACCATTT+GGG | + | chr8_2:46667703-46667722 | None:intergenic | 40.0% | |
| TCAAATCGACTGTGACCATT+TGG | + | chr8_2:46667704-46667723 | None:intergenic | 40.0% | |
| ATTGTCTGTGACCACCATTT+GGG | + | chr8_2:46667793-46667812 | None:intergenic | 40.0% | |
| AATTGTCTGTGACCACCATT+TGG | + | chr8_2:46667794-46667813 | None:intergenic | 40.0% | |
| ! | CATGGATTGTTTCCCATTTG+AGG | - | chr8_2:46668171-46668190 | Msa1250990:intron | 40.0% |
| TGTTTCCCATTTGAGGAAGA+TGG | - | chr8_2:46668178-46668197 | Msa1250990:intron | 40.0% | |
| CCAATCTCCAGAAACATAGT+TGG | + | chr8_2:46668450-46668469 | None:intergenic | 40.0% | |
| !! | CCAACTATGTTTCTGGAGAT+TGG | - | chr8_2:46668447-46668466 | Msa1250990:intron | 40.0% |
| ! | GTTCCAGTAATTTGCGAAGA+AGG | - | chr8_2:46668691-46668710 | Msa1250990:intron | 40.0% |
| GAACCTTCTTCGCAAATTAC+TGG | + | chr8_2:46668697-46668716 | None:intergenic | 40.0% | |
| ! | TTTGACAACACTGGTTAAGG+GGG | + | chr8_2:46668984-46669003 | None:intergenic | 40.0% |
| ATCTCTGTTGTTCCACGATA+TGG | - | chr8_2:46669046-46669065 | Msa1250990:intron | 40.0% | |
| GCAACACAGAAAGAGATATC+AGG | + | chr8_2:46669229-46669248 | None:intergenic | 40.0% | |
| ! | TAGGTAGTACTGAAGACTAC+TGG | - | chr8_2:46669481-46669500 | Msa1250990:intron | 40.0% |
| ACAAGATGCTGCTCAAGTTA+TGG | - | chr8_2:46669509-46669528 | Msa1250990:intron | 40.0% | |
| GTAACAGAATGTATGCACAC+AGG | + | chr8_2:46669594-46669613 | None:intergenic | 40.0% | |
| TTGGATTCGTTCAGTTAGTC+TGG | - | chr8_2:46669682-46669701 | Msa1250990:intron | 40.0% | |
| ! | TGGATTCGTTCAGTTAGTCT+GGG | - | chr8_2:46669683-46669702 | Msa1250990:intron | 40.0% |
| !! | TGGCATTCTTGTTTGGTGTT+TGG | - | chr8_2:46669790-46669809 | Msa1250990:intron | 40.0% |
| GACACATGCGAAAGATGTTA+AGG | + | chr8_2:46669827-46669846 | None:intergenic | 40.0% | |
| AAGAAAGTCCTTCTTGGGAT+AGG | - | chr8_2:46670396-46670415 | Msa1250990:CDS | 40.0% | |
| AACACTATATCCATATGCCG+AGG | + | chr8_2:46670438-46670457 | None:intergenic | 40.0% | |
| ! | TCTCCTTTTGGATCTTCCAT+TGG | + | chr8_2:46670862-46670881 | None:intergenic | 40.0% |
| GGAGAAACAAATGTGGAGAT+TGG | - | chr8_2:46670877-46670896 | Msa1250990:intron | 40.0% | |
| GAAACAAATGTGGAGATTGG+AGG | - | chr8_2:46670880-46670899 | Msa1250990:intron | 40.0% | |
| !! | GCAACTAAATCTGCTTTTCC+TGG | - | chr8_2:46670937-46670956 | Msa1250990:intron | 40.0% |
| !! | ACTAAATCTGCTTTTCCTGG+TGG | - | chr8_2:46670940-46670959 | Msa1250990:intron | 40.0% |
| ! | TTTTAATATTCTGCTCCGCG+AGG | + | chr8_2:46671264-46671283 | None:intergenic | 40.0% |
| AATGTGCAGATTGCAGACAT+AGG | - | chr8_2:46671344-46671363 | Msa1250990:intron | 40.0% | |
| ! | GGAGTGGTTTAGTATTGGAC+AGG | + | chr8_2:46666706-46666725 | None:intergenic | 45.0% |
| TTAGGTGAAAAAAGGGGTGG+CGG | + | chr8_2:46666728-46666747 | None:intergenic | 45.0% | |
| GGTTTAGGTGAAAAAAGGGG+TGG | + | chr8_2:46666731-46666750 | None:intergenic | 45.0% | |
| GCTGCGGTTTAGGTGAAAAA+AGG | + | chr8_2:46666736-46666755 | None:intergenic | 45.0% | |
| ! | TTGATGATCTAAGGCTGCTG+CGG | + | chr8_2:46666752-46666771 | None:intergenic | 45.0% |
| ! | AGGGTTGATTGAAGCAGGAT+CGG | + | chr8_2:46666850-46666869 | None:intergenic | 45.0% |
| !!! | AAGGGGTTTTTGGTTGAACC+TGG | + | chr8_2:46666920-46666939 | None:intergenic | 45.0% |
| !! | GGGTTGAGAGTGTTACTTCA+TGG | - | chr8_2:46667052-46667071 | Msa1250990:CDS | 45.0% |
| ! | TCATGGGAAGAGTATAGTGG+TGG | - | chr8_2:46667069-46667088 | Msa1250990:CDS | 45.0% |
| TTTGGATACAAGGTGGGAAG+AGG | - | chr8_2:46667099-46667118 | Msa1250990:intron | 45.0% | |
| ACTTCAAATTGAAGCCGGTC+TGG | + | chr8_2:46667412-46667431 | None:intergenic | 45.0% | |
| ! | ACCGGCTTCAATTTGAAGTG+TGG | - | chr8_2:46667413-46667432 | Msa1250990:CDS | 45.0% |
| ACATCACCTTCACGCAAATG+TGG | + | chr8_2:46667846-46667865 | None:intergenic | 45.0% | |
| CAAGGTCCAATCCTAGGATT+CGG | + | chr8_2:46667906-46667925 | None:intergenic | 45.0% | |
| ! | AGTAAGGCACCTCAAACTCA+GGG | + | chr8_2:46667971-46667990 | None:intergenic | 45.0% |
| TGTCAATGGTCCATGATGAG+TGG | + | chr8_2:46668421-46668440 | None:intergenic | 45.0% | |
| TCAAGTTCGTACCGTGAACA+TGG | - | chr8_2:46668563-46668582 | Msa1250990:intron | 45.0% | |
| !!! | TGCGTAACGGGTATTTTTGC+TGG | - | chr8_2:46668821-46668840 | Msa1250990:CDS | 45.0% |
| GGAAGGACCAAATGATGAGT+TGG | + | chr8_2:46668953-46668972 | None:intergenic | 45.0% | |
| GCTTTAGCAGTTCCACGATA+TGG | - | chr8_2:46669100-46669119 | Msa1250990:intron | 45.0% | |
| !! | TGGGGATGAGTTGATCAGTT+GGG | + | chr8_2:46669204-46669223 | None:intergenic | 45.0% |
| !! | TTGGGGATGAGTTGATCAGT+TGG | + | chr8_2:46669205-46669224 | None:intergenic | 45.0% |
| GGACATGGATGAAAGCAGAA+AGG | + | chr8_2:46669286-46669305 | None:intergenic | 45.0% | |
| ! | TTCGTTCAGTTAGTCTGGGA+AGG | - | chr8_2:46669687-46669706 | Msa1250990:intron | 45.0% |
| GAGCGTACAGAAACAACTTG+TGG | - | chr8_2:46670097-46670116 | Msa1250990:intron | 45.0% | |
| AATTCTCACACTCTTCCTGC+AGG | - | chr8_2:46670361-46670380 | Msa1250990:CDS | 45.0% | |
| ATTCTCACACTCTTCCTGCA+GGG | - | chr8_2:46670362-46670381 | Msa1250990:CDS | 45.0% | |
| CTTCTTATCATTCTCCCTGC+AGG | + | chr8_2:46670379-46670398 | None:intergenic | 45.0% | |
| AAAGTCCTTCTTGGGATAGG+TGG | - | chr8_2:46670399-46670418 | Msa1250990:CDS | 45.0% | |
| ACATTATGTGCCTCGGCATA+TGG | - | chr8_2:46670425-46670444 | Msa1250990:CDS | 45.0% | |
| CATGGGAGTTAAAACTCCAC+TGG | - | chr8_2:46670563-46670582 | Msa1250990:intron | 45.0% | |
| CTCCACTGGAATGAAGACAA+AGG | - | chr8_2:46670577-46670596 | Msa1250990:intron | 45.0% | |
| CACCTTTGTCTTCATTCCAG+TGG | + | chr8_2:46670582-46670601 | None:intergenic | 45.0% | |
| CACTGGAATGAAGACAAAGG+TGG | - | chr8_2:46670580-46670599 | Msa1250990:intron | 45.0% | |
| AGGAAAGATGGTGTTTGGGT+TGG | - | chr8_2:46670811-46670830 | Msa1250990:intron | 45.0% | |
| GCACCGAATATCCAGAAAGT+AGG | + | chr8_2:46670840-46670859 | None:intergenic | 45.0% | |
| !! | TTCTGGATATTCGGTGCCAA+TGG | - | chr8_2:46670843-46670862 | Msa1250990:intron | 45.0% |
| GTGCCAATGGAAGATCCAAA+AGG | - | chr8_2:46670856-46670875 | Msa1250990:intron | 45.0% | |
| ATGTGGAGATTGGAGGAACT+TGG | - | chr8_2:46670887-46670906 | Msa1250990:intron | 45.0% | |
| TGTGCAATAATTTCGCCACC+AGG | + | chr8_2:46670958-46670977 | None:intergenic | 45.0% | |
| !! | TAATTCTTATAAAAAAAAAA+TGG | + | chr8_2:46667233-46667252 | None:intergenic | 5.0% |
| TGGCGGGAGTGGTTTAGTAT+TGG | + | chr8_2:46666711-46666730 | None:intergenic | 50.0% | |
| TAGGTGAAAAAAGGGGTGGC+GGG | + | chr8_2:46666727-46666746 | None:intergenic | 50.0% | |
| ! | ATCTAAGGCTGCTGCGGTTT+AGG | + | chr8_2:46666746-46666765 | None:intergenic | 50.0% |
| GCAACGAGAAGAGACACCAT+TGG | + | chr8_2:46666819-46666838 | None:intergenic | 50.0% | |
| ! | TTGGCAGGGTTGATTGAAGC+AGG | + | chr8_2:46666855-46666874 | None:intergenic | 50.0% |
| TTGAACCTGGAAATGGGGTC+CGG | + | chr8_2:46666907-46666926 | None:intergenic | 50.0% | |
| ACAAGGTGGGAAGAGGTTAC+TGG | - | chr8_2:46667106-46667125 | Msa1250990:intron | 50.0% | |
| ATAGGGTGAACAGTGAGAGC+AGG | + | chr8_2:46667187-46667206 | None:intergenic | 50.0% | |
| GCTCTCACTGTTCACCCTAT+TGG | - | chr8_2:46667187-46667206 | Msa1250990:intron | 50.0% | |
| ATCGACTGTGACCATTTGGG+TGG | + | chr8_2:46667700-46667719 | None:intergenic | 50.0% | |
| GGAGTTCCACATTTGCGTGA+AGG | - | chr8_2:46667837-46667856 | Msa1250990:intron | 50.0% | |
| GAAGGTGATGTTCCACCTCA+AGG | - | chr8_2:46667855-46667874 | Msa1250990:intron | 50.0% | |
| GTGATGTTCCACCTCAAGGT+GGG | - | chr8_2:46667859-46667878 | Msa1250990:intron | 50.0% | |
| TCAAGGTGGGAAACCTGGAT+GGG | - | chr8_2:46667872-46667891 | Msa1250990:CDS | 50.0% | |
| GCATTGCCGAATCCTAGGAT+TGG | - | chr8_2:46667897-46667916 | Msa1250990:CDS | 50.0% | |
| CGAATCCTAGGATTGGACCT+TGG | - | chr8_2:46667904-46667923 | Msa1250990:CDS | 50.0% | |
| CGTATCCAAGGTCCAATCCT+AGG | + | chr8_2:46667912-46667931 | None:intergenic | 50.0% | |
| CAGTCTGATCCCTGAGTTTG+AGG | - | chr8_2:46667959-46667978 | Msa1250990:intron | 50.0% | |
| ! | GAGTAAGGCACCTCAAACTC+AGG | + | chr8_2:46667972-46667991 | None:intergenic | 50.0% |
| GGTATCGCGAAAGTCCATTC+AGG | - | chr8_2:46668842-46668861 | Msa1250990:intron | 50.0% | |
| TTAAGGGGGTAGAGTGAGGA+AGG | + | chr8_2:46668970-46668989 | None:intergenic | 50.0% | |
| ACTGCTAAAGCCCCGGTATT+TGG | + | chr8_2:46669091-46669110 | None:intergenic | 50.0% | |
| TGTGCTAAAGCCCCGGTATT+TGG | + | chr8_2:46669145-46669164 | None:intergenic | 50.0% | |
| ! | GAGTTGATCAGTTGGGATCG+TGG | + | chr8_2:46669197-46669216 | None:intergenic | 50.0% |
| GAAAGCAGAAAGGAGTGACC+AGG | + | chr8_2:46669276-46669295 | None:intergenic | 50.0% | |
| TGCTGCTCAAGTTATGGCTC+AGG | - | chr8_2:46669515-46669534 | Msa1250990:intron | 50.0% | |
| ! | CAGTTAGTCTGGGAAGGACT+TGG | - | chr8_2:46669693-46669712 | Msa1250990:intron | 50.0% |
| AAGGACTTGGACTTGGAGGA+GGG | - | chr8_2:46669706-46669725 | Msa1250990:intron | 50.0% | |
| !! | GTGGTGGACATTATGTGCCT+CGG | - | chr8_2:46670418-46670437 | Msa1250990:CDS | 50.0% |
| !! | TGGGTTGGTCACCTACTTTC+TGG | - | chr8_2:46670826-46670845 | Msa1250990:intron | 50.0% |
| TGGCAGAAGAATGCCATCAC+AGG | - | chr8_2:46671235-46671254 | Msa1250990:CDS | 50.0% | |
| !! | TGGCTAAGAGGGCATTGGCA+GGG | + | chr8_2:46666869-46666888 | None:intergenic | 55.0% |
| !! | ATGGCTAAGAGGGCATTGGC+AGG | + | chr8_2:46666870-46666889 | None:intergenic | 55.0% |
| ! | AGGCATGGCTAAGAGGGCAT+TGG | + | chr8_2:46666874-46666893 | None:intergenic | 55.0% |
| AATGCCCTCTTAGCCATGCC+TGG | - | chr8_2:46666873-46666892 | Msa1250990:three_prime_UTR | 55.0% | |
| TGAACCTGGAAATGGGGTCC+GGG | + | chr8_2:46666906-46666925 | None:intergenic | 55.0% | |
| ATTGAAGCCGGTCTGGTGTC+TGG | + | chr8_2:46667405-46667424 | None:intergenic | 55.0% | |
| AGAGCACACTGCACACACAC+CGG | + | chr8_2:46667606-46667625 | None:intergenic | 55.0% | |
| GGTGATGTTCCACCTCAAGG+TGG | - | chr8_2:46667858-46667877 | Msa1250990:intron | 55.0% | |
| CATCCAGGTTTCCCACCTTG+AGG | + | chr8_2:46667873-46667892 | None:intergenic | 55.0% | |
| CTCAAGGTGGGAAACCTGGA+TGG | - | chr8_2:46667871-46667890 | Msa1250990:CDS | 55.0% | |
| ! | ACTCTGGAGGCCACTCATCA+TGG | - | chr8_2:46668408-46668427 | Msa1250990:intron | 55.0% |
| CTGGTTAAGGGGGTAGAGTG+AGG | + | chr8_2:46668974-46668993 | None:intergenic | 55.0% | |
| TCGTGGAACTGCTAAAGCCC+CGG | + | chr8_2:46669098-46669117 | None:intergenic | 55.0% | |
| CCACTACTGTGCTAAAGCCC+CGG | + | chr8_2:46669152-46669171 | None:intergenic | 55.0% | |
| GTCTGGGAAGGACTTGGACT+TGG | - | chr8_2:46669699-46669718 | Msa1250990:intron | 55.0% | |
| TGGGAAGGACTTGGACTTGG+AGG | - | chr8_2:46669702-46669721 | Msa1250990:intron | 55.0% | |
| GAAGGACTTGGACTTGGAGG+AGG | - | chr8_2:46669705-46669724 | Msa1250990:intron | 55.0% | |
| CTTGGAGGAGGGACTGATGT+CGG | - | chr8_2:46669717-46669736 | Msa1250990:intron | 55.0% | |
| GAGGGACTGATGTCGGAAAC+TGG | - | chr8_2:46669724-46669743 | Msa1250990:intron | 55.0% | |
| CTGATGTCGGAAACTGGAGC+AGG | - | chr8_2:46669730-46669749 | Msa1250990:intron | 55.0% | |
| GTCCTTCTTGGGATAGGTGG+TGG | - | chr8_2:46670402-46670421 | Msa1250990:CDS | 55.0% | |
| GTCCACCACCTATCCCAAGA+AGG | + | chr8_2:46670407-46670426 | None:intergenic | 55.0% | |
| ACTGCAGGAGTTTCAAGGGC+TGG | - | chr8_2:46671215-46671234 | Msa1250990:CDS | 55.0% | |
| TGCCATCACAGGATTCCTCG+CGG | - | chr8_2:46671246-46671265 | Msa1250990:CDS | 55.0% | |
| !! | GAAAAAAGGGGTGGCGGGAG+TGG | + | chr8_2:46666722-46666741 | None:intergenic | 60.0% |
| CCAGCCAGGCATGGCTAAGA+GGG | + | chr8_2:46666880-46666899 | None:intergenic | 60.0% | |
| TGTCGTGCCAGACACCAGAC+CGG | - | chr8_2:46667395-46667414 | Msa1250990:CDS | 60.0% | |
| CCAGGTTTCCCACCTTGAGG+TGG | + | chr8_2:46667870-46667889 | None:intergenic | 60.0% | |
| CCACCTCAAGGTGGGAAACC+TGG | - | chr8_2:46667867-46667886 | Msa1250990:intron | 60.0% | |
| TTCGGCAATGCTGCCCATCC+AGG | + | chr8_2:46667888-46667907 | None:intergenic | 60.0% | |
| GGGCAGCATTGCCGAATCCT+AGG | - | chr8_2:46667892-46667911 | Msa1250990:CDS | 60.0% | |
| ! | CCGGGGCTTTAGCACAGTAG+TGG | - | chr8_2:46669149-46669168 | Msa1250990:intron | 60.0% |
| CTCCGCGAGGAATCCTGTGA+TGG | + | chr8_2:46671251-46671270 | None:intergenic | 60.0% | |
| CCCTCTTAGCCATGCCTGGC+TGG | - | chr8_2:46666877-46666896 | Msa1250990:three_prime_UTR | 65.0% | |
| GCCAGCCAGGCATGGCTAAG+AGG | + | chr8_2:46666881-46666900 | None:intergenic | 65.0% | |
| GCAACCCGGACCCCATTTCC+AGG | - | chr8_2:46666899-46666918 | Msa1250990:three_prime_UTR | 65.0% | |
| GCCATGCCTGGCTGGCAACC+CGG | - | chr8_2:46666885-46666904 | Msa1250990:three_prime_UTR | 70.0% | |
| TCCGGGTTGCCAGCCAGGCA+TGG | + | chr8_2:46666889-46666908 | None:intergenic | 70.0% | |
| TGGGGTCCGGGTTGCCAGCC+AGG | + | chr8_2:46666894-46666913 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 46666636 | 46671689 | 46666636 | ID=Msa1250990;Name=Msa1250990 |
| chr8_2 | mRNA | 46666636 | 46671689 | 46666636 | ID=Msa1250990-mRNA-1;Parent=Msa1250990;Name=Msa1250990-mRNA-1;_AED=0.37;_eAED=0.37;_QI=42|1|1|1|1|1|9|380|360 |
| chr8_2 | exon | 46666636 | 46667103 | 46666636 | ID=Msa1250990-mRNA-1:exon:14146;Parent=Msa1250990-mRNA-1 |
| chr8_2 | exon | 46667336 | 46667512 | 46667336 | ID=Msa1250990-mRNA-1:exon:14145;Parent=Msa1250990-mRNA-1 |
| chr8_2 | exon | 46667868 | 46667942 | 46667868 | ID=Msa1250990-mRNA-1:exon:14144;Parent=Msa1250990-mRNA-1 |
| chr8_2 | exon | 46668574 | 46668629 | 46668574 | ID=Msa1250990-mRNA-1:exon:14143;Parent=Msa1250990-mRNA-1 |
| chr8_2 | exon | 46668789 | 46668841 | 46668789 | ID=Msa1250990-mRNA-1:exon:14142;Parent=Msa1250990-mRNA-1 |
| chr8_2 | exon | 46669857 | 46669920 | 46669857 | ID=Msa1250990-mRNA-1:exon:14141;Parent=Msa1250990-mRNA-1 |
| chr8_2 | exon | 46670345 | 46670487 | 46670345 | ID=Msa1250990-mRNA-1:exon:14140;Parent=Msa1250990-mRNA-1 |
| chr8_2 | exon | 46671117 | 46671300 | 46671117 | ID=Msa1250990-mRNA-1:exon:14139;Parent=Msa1250990-mRNA-1 |
| chr8_2 | exon | 46671405 | 46671689 | 46671405 | ID=Msa1250990-mRNA-1:exon:14138;Parent=Msa1250990-mRNA-1 |
| chr8_2 | five_prime_UTR | 46671648 | 46671689 | 46671648 | ID=Msa1250990-mRNA-1:five_prime_utr;Parent=Msa1250990-mRNA-1 |
| chr8_2 | CDS | 46671405 | 46671647 | 46671405 | ID=Msa1250990-mRNA-1:cds;Parent=Msa1250990-mRNA-1 |
| chr8_2 | CDS | 46671117 | 46671300 | 46671117 | ID=Msa1250990-mRNA-1:cds;Parent=Msa1250990-mRNA-1 |
| chr8_2 | CDS | 46670345 | 46670487 | 46670345 | ID=Msa1250990-mRNA-1:cds;Parent=Msa1250990-mRNA-1 |
| chr8_2 | CDS | 46669857 | 46669920 | 46669857 | ID=Msa1250990-mRNA-1:cds;Parent=Msa1250990-mRNA-1 |
| chr8_2 | CDS | 46668789 | 46668841 | 46668789 | ID=Msa1250990-mRNA-1:cds;Parent=Msa1250990-mRNA-1 |
| chr8_2 | CDS | 46668574 | 46668629 | 46668574 | ID=Msa1250990-mRNA-1:cds;Parent=Msa1250990-mRNA-1 |
| chr8_2 | CDS | 46667868 | 46667942 | 46667868 | ID=Msa1250990-mRNA-1:cds;Parent=Msa1250990-mRNA-1 |
| chr8_2 | CDS | 46667336 | 46667512 | 46667336 | ID=Msa1250990-mRNA-1:cds;Parent=Msa1250990-mRNA-1 |
| chr8_2 | CDS | 46667016 | 46667103 | 46667016 | ID=Msa1250990-mRNA-1:cds;Parent=Msa1250990-mRNA-1 |
| chr8_2 | three_prime_UTR | 46666636 | 46667015 | 46666636 | ID=Msa1250990-mRNA-1:three_prime_utr;Parent=Msa1250990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
