AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1193890

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1193890 MtrunA17_Chr8g0365241 96.919 357 11 0 1 357 6 362 0.0 714
Msa1193890 MtrunA17_Chr5g0420981 90.782 358 32 1 1 357 1 358 0.0 671
Msa1193890 MtrunA17_Chr5g0420951 83.240 358 59 1 1 357 1 358 0.0 617
Msa1193890 MtrunA17_Chr5g0423191 69.034 352 108 1 6 357 1 351 0.0 514
Msa1193890 MtrunA17_Chr5g0420941 66.571 347 115 1 11 357 4 349 1.08e-176 494
Msa1193890 MtrunA17_Chr5g0421041 66.286 350 115 2 8 357 3 349 1.98e-175 491
Msa1193890 MtrunA17_Chr5g0421101 68.678 348 108 1 10 357 5 351 4.34e-175 490
Msa1193890 MtrunA17_Chr5g0423251 66.286 350 117 1 8 357 3 351 6.43e-175 490
Msa1193890 MtrunA17_Chr5g0420901 65.043 349 120 2 10 357 3 350 2.56e-173 486
Msa1193890 MtrunA17_Chr5g0423221 66.762 349 114 2 10 357 29 376 2.46e-170 479
Msa1193890 MtrunA17_Chr5g0421011 67.045 352 115 1 6 357 1 351 1.16e-169 476
Msa1193890 MtrunA17_Chr5g0421091 63.793 348 124 2 11 357 4 350 7.86e-167 469
Msa1193890 MtrunA17_Chr5g0423211 64.205 352 119 4 10 356 3 352 5.51e-166 467
Msa1193890 MtrunA17_Chr8g0375671 60.000 360 141 1 1 357 1 360 1.93e-163 461
Msa1193890 MtrunA17_Chr5g0423201 63.324 349 126 2 10 357 5 352 1.59e-162 458
Msa1193890 MtrunA17_Chr2g0314401 60.983 346 134 1 10 354 9 354 9.63e-160 451
Msa1193890 MtrunA17_Chr2g0314391 60.458 349 137 1 10 357 28 376 1.74e-155 441
Msa1193890 MtrunA17_Chr2g0314381 60.857 350 135 2 10 357 34 383 8.81e-155 440
Msa1193890 MtrunA17_Chr8g0375571 59.654 347 137 1 11 354 4 350 5.97e-152 432
Msa1193890 MtrunA17_Chr8g0375601 58.908 348 138 2 15 357 8 355 2.24e-151 431
Msa1193890 MtrunA17_Chr1g0162191 56.125 351 147 3 6 354 5 350 8.23e-139 398
Msa1193890 MtrunA17_Chr5g0420721 67.600 250 81 0 108 357 4 253 4.88e-129 370
Msa1193890 MtrunA17_Chr8g0375681 61.314 274 106 0 84 357 15 288 5.74e-126 363
Msa1193890 MtrunA17_Chr8g0375701 45.217 345 186 3 11 354 13 355 4.94e-113 333
Msa1193890 MtrunA17_Chr2g0314371 52.997 317 123 4 10 302 9 323 5.41e-111 327
Msa1193890 MtrunA17_Chr3g0087031 41.880 351 198 4 7 354 13 360 3.97e-97 292
Msa1193890 MtrunA17_Chr2g0296371 40.751 346 198 4 15 355 14 357 1.30e-94 286
Msa1193890 MtrunA17_Chr7g0239101 39.420 345 207 2 12 355 14 357 1.62e-94 286
Msa1193890 MtrunA17_Chr7g0239821 39.655 348 202 3 12 355 23 366 2.03e-94 286
Msa1193890 MtrunA17_Chr7g0239111 39.420 345 207 2 12 355 14 357 3.78e-93 282
Msa1193890 MtrunA17_Chr7g0239121 38.793 348 210 3 12 357 10 356 4.57e-89 272
Msa1193890 MtrunA17_Chr7g0232161 42.294 279 159 2 12 289 19 296 6.07e-81 249
Msa1193890 MtrunA17_Chr5g0437181 37.771 323 195 3 18 334 14 336 2.02e-80 249
Msa1193890 MtrunA17_Chr5g0420881 69.388 147 45 0 211 357 1 147 7.59e-79 238
Msa1193890 MtrunA17_Chr7g0242551 36.280 328 198 4 18 334 15 342 1.40e-78 245
Msa1193890 MtrunA17_Chr4g0006371 35.588 340 199 4 15 334 11 350 9.92e-75 235
Msa1193890 MtrunA17_Chr3g0128001 39.185 319 189 3 27 344 13 327 1.86e-73 231
Msa1193890 MtrunA17_Chr3g0145171 37.919 298 181 3 51 346 51 346 3.28e-73 231
Msa1193890 MtrunA17_Chr3g0113641 33.918 342 220 3 18 353 15 356 1.15e-72 229
Msa1193890 MtrunA17_Chr5g0426891 37.644 348 199 9 17 354 3 342 3.32e-71 225
Msa1193890 MtrunA17_Chr7g0239071 34.459 296 191 2 62 357 12 304 1.50e-69 220
Msa1193890 MtrunA17_Chr3g0109041 33.908 348 218 7 18 356 10 354 7.40e-68 217
Msa1193890 MtrunA17_Chr8g0345831 34.694 343 215 6 12 350 2 339 2.14e-67 216
Msa1193890 MtrunA17_Chr7g0239091 33.824 340 213 4 16 354 123 451 1.07e-66 217
Msa1193890 MtrunA17_Chr8g0370721 35.621 306 193 3 51 354 51 354 2.44e-65 211
Msa1193890 MtrunA17_Chr8g0370711 35.294 306 194 3 51 354 51 354 1.81e-64 208
Msa1193890 MtrunA17_Chr5g0420891 63.924 158 55 2 10 166 3 159 8.28e-64 200
Msa1193890 MtrunA17_Chr1g0179801 31.728 353 221 6 17 354 26 373 1.27e-63 207
Msa1193890 MtrunA17_Chr8g0375641 55.621 169 72 1 1 166 1 169 4.01e-63 199
Msa1193890 MtrunA17_Chr4g0064781 33.429 347 220 6 13 356 12 350 2.88e-61 200
Msa1193890 MtrunA17_Chr8g0375661 56.962 158 65 1 12 166 12 169 3.03e-61 194
Msa1193890 MtrunA17_Chr5g0398291 35.030 334 196 8 9 326 1 329 3.33e-59 195
Msa1193890 MtrunA17_Chr7g0265221 30.199 351 218 6 26 354 35 380 3.98e-58 192
Msa1193890 MtrunA17_Chr3g0145181 34.242 330 198 7 17 334 12 334 5.81e-57 189
Msa1193890 MtrunA17_Chr3g0125201 36.531 271 160 2 52 317 3 266 2.13e-56 186
Msa1193890 MtrunA17_Chr3g0114861 30.816 331 220 4 15 341 3 328 1.48e-54 182
Msa1193890 MtrunA17_Chr1g0204181 33.663 303 188 5 40 330 45 346 3.82e-53 179
Msa1193890 MtrunA17_Chr5g0412651 34.441 331 195 10 25 342 12 333 7.05e-53 178
Msa1193890 MtrunA17_Chr3g0145201 35.517 290 178 5 51 334 683 969 2.68e-52 186
Msa1193890 MtrunA17_Chr4g0050031 32.476 311 196 6 52 354 62 366 6.05e-52 176
Msa1193890 MtrunA17_Chr7g0266651 29.143 350 230 8 17 356 23 364 6.54e-52 176
Msa1193890 MtrunA17_Chr4g0045411 32.903 310 183 7 44 334 22 325 7.94e-52 175
Msa1193890 MtrunA17_Chr5g0424201 31.118 331 213 8 13 335 4 327 8.43e-52 175
Msa1193890 MtrunA17_Chr7g0250511 28.947 342 236 6 17 354 13 351 1.11e-51 175
Msa1193890 MtrunA17_Chr8g0371931 32.746 284 183 5 35 313 23 303 1.87e-51 175
Msa1193890 MtrunA17_Chr3g0126741 34.304 309 189 6 52 353 59 360 2.08e-51 175
Msa1193890 MtrunA17_Chr2g0332191 30.303 330 211 7 26 344 25 346 6.51e-51 174
Msa1193890 MtrunA17_Chr8g0336851 30.508 354 228 8 1 345 11 355 6.59e-51 173
Msa1193890 MtrunA17_Chr5g0412681 33.438 317 193 9 32 341 14 319 7.45e-51 172
Msa1193890 MtrunA17_Chr1g0162361 31.988 322 190 8 33 335 8 319 8.91e-51 172
Msa1193890 MtrunA17_Chr8g0351101 32.698 315 198 7 26 330 30 340 1.55e-50 172
Msa1193890 MtrunA17_Chr2g0289341 29.431 299 198 5 53 346 5 295 3.36e-50 170
Msa1193890 MtrunA17_Chr6g0474391 30.938 320 192 5 39 330 33 351 5.78e-50 171
Msa1193890 MtrunA17_Chr1g0187821 31.833 311 199 6 51 354 66 370 7.63e-50 171
Msa1193890 MtrunA17_Chr8g0371921 32.979 282 181 5 37 313 25 303 8.46e-50 171
Msa1193890 MtrunA17_Chr3g0121141 29.766 299 195 6 53 346 5 293 1.02e-49 169
Msa1193890 MtrunA17_Chr1g0187831 30.814 344 212 9 26 353 40 373 1.08e-49 171
Msa1193890 MtrunA17_Chr1g0162351 30.744 309 182 7 45 327 62 364 1.63e-49 171
Msa1193890 MtrunA17_Chr8g0336861 31.045 335 214 7 17 342 27 353 4.14e-49 169
Msa1193890 MtrunA17_Chr7g0220001 33.022 321 200 7 27 341 16 327 7.60e-49 167
Msa1193890 MtrunA17_Chr5g0439011 30.033 303 193 6 53 346 6 298 1.11e-48 166
Msa1193890 MtrunA17_Chr8g0336761 30.473 338 217 8 17 345 27 355 1.57e-48 167
Msa1193890 MtrunA17_Chr1g0162321 30.744 309 182 7 45 327 62 364 1.75e-48 168
Msa1193890 MtrunA17_Chr8g0354261 28.814 354 231 8 17 357 32 377 2.21e-48 167
Msa1193890 MtrunA17_Chr8g0336781 30.357 336 221 7 17 345 62 391 5.78e-48 167
Msa1193890 MtrunA17_Chr8g0336631 30.267 337 220 7 17 345 27 356 6.83e-48 166
Msa1193890 MtrunA17_Chr7g0220011 31.595 326 198 8 27 341 14 325 7.37e-48 164
Msa1193890 MtrunA17_Chr5g0405411 32.509 283 183 5 36 313 24 303 8.91e-48 165
Msa1193890 MtrunA17_Chr4g0045471 31.683 303 172 9 52 327 26 320 2.18e-47 164
Msa1193890 MtrunA17_Chr8g0348081 29.762 336 222 6 17 345 27 355 2.37e-47 164
Msa1193890 MtrunA17_Chr2g0311761 30.725 345 228 5 17 354 32 372 2.87e-47 164
Msa1193890 MtrunA17_Chr3g0102041 34.025 241 156 2 75 313 64 303 4.04e-47 163
Msa1193890 MtrunA17_Chr5g0412671 33.007 306 198 5 43 342 29 333 4.50e-47 163
Msa1193890 MtrunA17_Chr2g0311921 28.986 345 234 5 17 354 18 358 8.53e-47 162
Msa1193890 MtrunA17_Chr8g0354241 28.409 352 231 8 17 355 32 375 1.50e-46 162
Msa1193890 MtrunA17_Chr6g0455481 32.000 325 199 8 27 341 17 329 1.53e-46 161
Msa1193890 MtrunA17_Chr1g0161041 30.409 342 221 9 17 350 59 391 2.95e-46 162
Msa1193890 MtrunA17_Chr8g0336751 29.586 338 222 8 17 345 58 388 3.02e-46 162
Msa1193890 MtrunA17_Chr5g0424211 32.500 280 175 7 52 323 42 315 9.91e-46 159
Msa1193890 MtrunA17_Chr3g0125421 31.922 307 185 7 51 339 35 335 1.44e-45 159
Msa1193890 MtrunA17_Chr2g0311691 29.940 334 213 9 17 336 26 352 4.05e-45 158
Msa1193890 MtrunA17_Chr3g0130391 31.973 294 189 5 53 336 67 359 4.19e-45 159
Msa1193890 MtrunA17_Chr2g0311831 30.357 336 222 6 17 345 32 362 5.27e-45 158
Msa1193890 MtrunA17_Chr1g0184161 32.716 324 195 9 29 341 15 326 5.85e-45 157
Msa1193890 MtrunA17_Chr1g0191201 32.069 290 186 6 51 330 52 340 8.68e-45 157
Msa1193890 MtrunA17_Chr1g0184111 31.003 329 213 7 23 344 8 329 1.03e-44 157
Msa1193890 MtrunA17_Chr4g0055591 28.977 352 222 11 17 354 24 361 2.49e-44 156
Msa1193890 MtrunA17_Chr1g0184101 31.290 310 204 5 51 356 37 341 3.93e-44 155
Msa1193890 MtrunA17_Chr7g0235951 28.571 350 230 7 17 354 32 373 6.08e-44 155
Msa1193890 MtrunA17_Chr4g0045451 29.938 324 197 8 36 335 10 327 7.60e-44 154
Msa1193890 MtrunA17_Chr1g0187811 28.691 359 239 8 7 354 141 493 8.49e-44 157
Msa1193890 MtrunA17_Chr4g0045441 30.746 335 202 8 36 346 10 338 1.23e-43 154
Msa1193890 MtrunA17_Chr1g0184151 30.769 325 206 8 26 341 12 326 1.33e-43 154
Msa1193890 MtrunA17_Chr8g0375591 59.055 127 48 2 12 134 5 131 1.72e-43 147
Msa1193890 MtrunA17_Chr7g0265351 32.237 304 194 7 51 350 38 333 1.73e-43 153
Msa1193890 MtrunA17_Chr1g0161111 30.925 346 220 10 17 353 95 430 2.42e-43 155
Msa1193890 MtrunA17_Chr6g0472861 29.014 355 231 9 17 356 27 375 2.78e-43 154
Msa1193890 MtrunA17_Chr2g0311741 28.808 302 207 5 44 343 22 317 3.11e-43 152
Msa1193890 MtrunA17_Chr2g0311681 29.851 335 212 11 17 336 26 352 4.03e-43 153
Msa1193890 MtrunA17_Chr4g0066121 29.755 326 214 8 17 334 27 345 5.62e-43 152
Msa1193890 MtrunA17_Chr2g0285931 31.329 316 194 10 41 343 17 322 6.03e-43 152
Msa1193890 MtrunA17_Chr1g0161081 30.473 338 218 8 17 346 36 364 1.07e-42 152
Msa1193890 MtrunA17_Chr3g0093761 30.747 348 212 10 17 350 17 349 1.31e-42 151
Msa1193890 MtrunA17_Chr1g0184121 30.061 326 214 7 23 341 8 326 3.88e-42 150
Msa1193890 MtrunA17_Chr3g0093741 30.029 343 222 9 17 350 17 350 8.09e-42 149
Msa1193890 MtrunA17_Chr2g0311711 29.118 340 219 9 17 343 30 360 9.77e-42 149
Msa1193890 MtrunA17_Chr4g0045431 32.302 291 163 7 36 300 10 292 2.07e-41 148
Msa1193890 MtrunA17_Chr4g0068891 32.450 302 183 9 52 343 20 310 2.36e-41 147
Msa1193890 MtrunA17_Chr2g0311701 27.778 342 224 7 17 343 32 365 9.25e-41 147
Msa1193890 MtrunA17_Chr3g0093751 30.659 349 212 11 17 350 17 350 2.60e-40 145
Msa1193890 MtrunA17_Chr1g0148771 30.100 299 193 8 52 347 63 348 4.07e-40 145
Msa1193890 MtrunA17_Chr2g0319491 28.664 307 189 7 45 337 26 316 5.63e-40 144
Msa1193890 MtrunA17_Chr7g0225881 27.778 342 227 9 17 345 27 361 7.59e-40 144
Msa1193890 MtrunA17_Chr6g0488511 30.545 275 177 5 52 320 3 269 8.55e-40 142
Msa1193890 MtrunA17_Chr8g0384461 28.972 321 211 7 27 336 24 338 1.12e-39 144
Msa1193890 MtrunA17_Chr4g0066991 28.190 337 210 5 17 345 32 344 5.08e-38 139
Msa1193890 MtrunA17_Chr2g0311631 29.532 342 220 9 17 346 21 353 8.31e-38 139
Msa1193890 MtrunA17_Chr4g0045461 30.968 310 193 6 45 335 19 326 1.39e-37 138
Msa1193890 MtrunA17_Chr1g0170631 35.897 195 120 3 166 357 3 195 2.48e-37 133
Msa1193890 MtrunA17_Chr7g0236011 28.070 342 224 10 17 345 32 364 5.63e-37 137
Msa1193890 MtrunA17_Chr2g0311861 27.463 335 213 6 17 345 28 338 9.69e-37 135
Msa1193890 MtrunA17_Chr2g0313111 31.293 294 177 11 33 318 14 290 1.05e-36 135
Msa1193890 MtrunA17_Chr1g0184241 26.647 334 232 6 17 345 33 358 1.52e-36 135
Msa1193890 MtrunA17_Chr8g0364471 26.023 342 231 8 17 345 32 364 2.62e-36 135
Msa1193890 MtrunA17_Chr7g0247991 27.089 347 239 8 17 354 32 373 3.42e-36 135
Msa1193890 MtrunA17_Chr8g0335411 27.933 358 222 10 17 354 32 373 7.89e-36 134
Msa1193890 MtrunA17_Chr1g0167911 27.941 340 223 5 17 345 19 347 9.66e-36 133
Msa1193890 MtrunA17_Chr8g0375581 66.279 86 29 0 187 272 1 86 1.07e-35 125
Msa1193890 MtrunA17_Chr3g0114871 31.636 275 173 9 18 284 7 274 3.58e-35 129
Msa1193890 MtrunA17_Chr1g0167961 28.834 326 217 6 17 334 34 352 1.16e-34 130
Msa1193890 MtrunA17_Chr8g0358941 28.221 326 208 10 46 356 21 335 1.44e-34 129
Msa1193890 MtrunA17_Chr1g0167951 27.545 334 231 5 17 345 19 346 4.78e-33 125
Msa1193890 MtrunA17_Chr4g0052251 28.723 282 185 9 74 343 45 322 5.01e-33 125
Msa1193890 MtrunA17_Chr4g0053251 30.169 295 172 7 46 313 2 289 1.41e-32 124
Msa1193890 MtrunA17_Chr1g0194321 27.829 327 204 11 52 357 20 335 2.93e-32 123
Msa1193890 MtrunA17_Chr1g0167931 26.239 343 205 5 17 354 19 318 8.85e-32 121
Msa1193890 MtrunA17_Chr4g0064771 32.973 185 117 3 167 348 27 207 4.08e-31 117
Msa1193890 MtrunA17_Chr3g0105281 29.344 259 162 6 52 302 34 279 5.39e-31 119
Msa1193890 MtrunA17_Chr2g0314361 60.494 81 32 0 276 356 1 81 5.99e-30 110
Msa1193890 MtrunA17_Chr4g0075471 35.374 147 91 2 196 338 12 158 9.47e-30 112
Msa1193890 MtrunA17_Chr4g0011311 28.195 266 175 7 17 275 32 288 1.06e-29 115
Msa1193890 MtrunA17_Chr2g0293931 33.846 195 116 7 167 350 8 200 1.23e-29 113
Msa1193890 MtrunA17_Chr7g0235981 30.500 200 132 3 161 354 129 327 1.80e-29 115
Msa1193890 MtrunA17_Chr3g0126761 38.562 153 92 2 205 357 85 235 2.71e-29 113
Msa1193890 MtrunA17_Chr5g0420731 64.286 84 29 1 6 89 1 83 3.72e-29 108
Msa1193890 MtrunA17_Chr3g0092531 27.157 313 202 9 50 357 4 295 6.35e-29 114
Msa1193890 MtrunA17_Chr8g0384481 26.978 278 189 5 51 318 58 331 1.74e-28 114
Msa1193890 MtrunA17_Chr5g0394071 32.738 168 102 3 169 334 5 163 3.85e-28 108
Msa1193890 MtrunA17_Chr7g0233661 39.844 128 66 3 209 334 19 137 1.11e-27 106
Msa1193890 MtrunA17_Chr8g0336801 35.507 138 85 2 211 345 11 147 4.99e-27 104
Msa1193890 MtrunA17_Chr5g0407781 25.987 304 213 6 52 354 5 297 1.88e-26 107
Msa1193890 MtrunA17_Chr8g0348951 27.476 313 189 10 43 336 1 294 6.67e-25 103
Msa1193890 MtrunA17_Chr4g0037611 32.099 162 99 4 174 334 2 153 1.27e-24 99.0
Msa1193890 MtrunA17_Chr1g0158011 30.159 252 157 10 93 337 5 244 2.78e-24 100
Msa1193890 MtrunA17_Chr8g0336871 32.749 171 105 3 178 345 2 165 3.28e-24 97.8
Msa1193890 MtrunA17_Chr4g0055911 28.435 313 195 14 44 339 4 304 1.84e-23 99.4
Msa1193890 MtrunA17_Chr7g0247741 31.095 283 173 12 42 313 1 272 3.12e-23 98.6
Msa1193890 MtrunA17_Chr8g0362741 27.481 262 167 7 17 275 32 273 7.07e-22 94.0
Msa1193890 MtrunA17_Chr4g0004071 29.097 299 199 9 51 342 8 300 2.24e-21 93.2
Msa1193890 MtrunA17_Chr4g0004061 28.247 308 203 11 45 342 2 301 2.87e-20 90.1
Msa1193890 MtrunA17_Chr2g0319521 36.036 111 70 1 165 275 15 124 4.39e-20 85.5
Msa1193890 MtrunA17_Chr6g0486831 27.368 285 179 11 75 335 41 321 6.92e-20 89.4
Msa1193890 MtrunA17_Chr4g0055871 26.045 311 187 9 52 339 9 299 5.68e-19 86.3
Msa1193890 MtrunA17_Chr8g0389941 25.874 286 188 11 75 339 54 336 1.48e-18 85.5
Msa1193890 MtrunA17_Chr5g0407731 24.211 285 202 8 52 334 33 305 1.66e-18 85.5
Msa1193890 MtrunA17_Chr7g0256741 27.491 291 182 10 52 327 10 286 2.06e-18 84.7
Msa1193890 MtrunA17_Chr1g0158021 27.679 224 145 7 51 267 48 261 4.15e-18 83.2
Msa1193890 MtrunA17_Chr8g0375621 62.500 56 21 0 187 242 1 56 6.16e-18 77.0
Msa1193890 MtrunA17_Chr8g0364171 36.364 110 69 1 166 275 18 126 9.79e-18 79.0
Msa1193890 MtrunA17_Chr7g0219991 41.121 107 62 1 167 273 249 354 1.44e-17 82.8
Msa1193890 MtrunA17_Chr3g0138351 25.079 315 202 12 51 344 6 307 1.73e-17 82.0
Msa1193890 MtrunA17_Chr8g0336831 26.250 240 164 5 1 234 11 243 6.46e-17 79.3
Msa1193890 MtrunA17_Chr1g0158031 33.553 152 94 4 176 323 1 149 2.08e-16 76.3
Msa1193890 MtrunA17_Chr3g0092581 26.230 183 118 5 176 357 1 167 8.26e-16 75.1
Msa1193890 MtrunA17_Chr1g0161101 41.121 107 52 3 197 302 392 488 6.88e-15 75.9
Msa1193890 MtrunA17_Chr4g0009561 22.078 308 221 11 51 344 6 308 1.67e-13 70.5
Msa1193890 MtrunA17_Chr4g0009541 23.077 182 135 4 157 334 115 295 3.48e-13 69.7
Msa1193890 MtrunA17_Chr2g0311611 40.278 72 35 2 211 275 1 71 4.03e-13 63.9
Msa1193890 MtrunA17_Chr8g0375611 50.980 51 25 0 307 357 1 51 2.33e-12 61.6
Msa1193890 MtrunA17_Chr1g0167921 31.068 103 70 1 172 274 55 156 3.02e-12 64.3
Msa1193890 MtrunA17_Chr4g0075431 25.641 156 105 3 49 202 1 147 6.86e-12 63.5
Msa1193890 MtrunA17_Chr1g0148781 24.671 304 200 13 52 335 8 302 7.40e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1193890 AT1G17020.1 52.436 349 161 4 11 354 10 358 6.10e-138 396
Msa1193890 AT4G25300.1 52.874 348 160 4 11 354 9 356 1.56e-134 388
Msa1193890 AT1G17010.1 51.989 352 164 4 11 357 10 361 4.53e-134 387
Msa1193890 AT4G25310.1 52.586 348 158 4 11 354 9 353 2.28e-131 380
Msa1193890 AT1G78550.1 47.293 351 182 3 7 354 6 356 1.42e-121 355
Msa1193890 AT4G25310.2 46.686 347 152 4 11 354 9 325 8.25e-108 318
Msa1193890 AT1G78550.2 48.905 274 140 0 81 354 5 278 2.58e-102 303
Msa1193890 AT3G21420.1 43.020 351 191 4 15 356 14 364 4.51e-101 303
Msa1193890 AT2G38240.1 37.243 341 207 3 17 352 11 349 4.40e-83 256
Msa1193890 AT5G05600.1 34.513 339 216 3 18 350 27 365 4.58e-78 244
Msa1193890 AT3G55970.1 35.159 347 214 5 18 353 14 360 5.45e-78 244
Msa1193890 AT3G11180.2 36.728 324 197 4 18 334 56 378 2.26e-75 238
Msa1193890 AT3G11180.1 35.588 340 211 4 18 350 56 394 2.49e-75 238
Msa1193890 AT5G20400.1 36.364 330 201 6 17 338 8 336 9.00e-73 230
Msa1193890 AT4G25300.2 54.450 191 86 1 165 354 72 262 7.60e-72 224
Msa1193890 AT1G49390.1 35.625 320 199 5 17 330 8 326 5.87e-71 225
Msa1193890 AT5G24530.1 37.267 322 194 4 27 344 13 330 3.63e-69 220
Msa1193890 AT5G54000.2 34.743 331 206 5 17 338 8 337 1.93e-68 219
Msa1193890 AT5G20550.1 35.650 331 204 7 17 339 8 337 6.02e-68 218
Msa1193890 AT4G10490.1 32.571 350 222 7 10 353 3 344 5.73e-64 207
Msa1193890 AT1G49390.2 37.247 247 154 1 85 330 1 247 7.34e-63 202
Msa1193890 AT5G05600.2 36.364 264 162 3 18 275 27 290 1.12e-61 199
Msa1193890 AT2G36690.2 32.853 347 223 5 18 356 21 365 1.68e-61 201
Msa1193890 AT2G36690.1 32.853 347 223 5 18 356 21 365 1.68e-61 201
Msa1193890 AT3G60290.1 35.694 353 203 11 17 356 15 356 8.50e-61 199
Msa1193890 AT4G16330.2 34.853 307 185 7 51 352 66 362 1.19e-60 199
Msa1193890 AT5G54000.1 36.187 257 161 2 85 338 1 257 1.85e-60 196
Msa1193890 AT4G10500.1 30.168 358 232 7 1 353 1 345 9.78e-59 194
Msa1193890 AT3G55970.2 36.431 269 160 5 18 275 14 282 2.96e-58 191
Msa1193890 AT2G44800.1 34.402 343 215 8 17 353 15 353 1.00e-57 191
Msa1193890 AT4G22880.1 32.565 347 214 7 15 346 4 345 1.14e-55 186
Msa1193890 AT4G22880.2 32.565 347 214 7 15 346 4 345 1.14e-55 186
Msa1193890 AT4G22880.3 32.565 347 214 7 15 346 4 345 1.14e-55 186
Msa1193890 AT1G55290.1 34.493 345 203 11 17 350 25 357 5.40e-55 184
Msa1193890 AT3G19010.1 33.535 331 185 9 51 355 27 348 1.16e-54 183
Msa1193890 AT3G19010.4 33.535 331 185 9 51 355 27 348 1.16e-54 183
Msa1193890 AT1G77330.1 34.333 300 181 3 52 343 3 294 2.57e-54 181
Msa1193890 AT3G19000.1 34.426 305 174 7 51 335 31 329 2.10e-53 180
Msa1193890 AT3G13610.1 32.378 349 212 12 17 354 26 361 1.12e-51 176
Msa1193890 AT3G51240.1 30.341 323 217 5 27 344 13 332 3.09e-51 174
Msa1193890 AT4G25420.1 32.993 294 187 3 52 336 61 353 1.13e-50 173
Msa1193890 AT4G16330.1 35.178 253 155 4 104 352 9 256 1.82e-50 169
Msa1193890 AT1G12010.1 31.023 303 189 6 51 346 6 295 2.77e-50 171
Msa1193890 AT5G07480.1 30.814 344 211 11 29 356 24 356 3.51e-50 172
Msa1193890 AT1G62380.1 30.667 300 194 5 51 346 6 295 1.03e-49 169
Msa1193890 AT5G08640.2 30.919 359 216 12 1 350 1 336 1.15e-49 170
Msa1193890 AT5G08640.1 30.919 359 216 12 1 350 1 336 1.15e-49 170
Msa1193890 AT5G59540.1 29.714 350 225 7 18 354 25 366 1.39e-48 167
Msa1193890 AT5G43450.1 31.195 343 216 9 18 349 24 357 4.34e-48 166
Msa1193890 AT3G19010.3 32.698 315 179 10 51 355 27 318 1.46e-47 164
Msa1193890 AT1G60980.1 33.003 303 185 6 29 317 36 334 2.49e-47 165
Msa1193890 AT1G05010.1 28.808 302 200 5 53 346 5 299 1.18e-46 161
Msa1193890 AT5G59530.1 30.199 351 221 10 18 354 24 364 5.72e-46 160
Msa1193890 AT1G06640.1 30.252 357 218 9 17 354 25 369 6.98e-46 160
Msa1193890 AT5G63590.1 35.593 295 170 9 47 328 9 296 8.56e-46 159
Msa1193890 AT1G04380.1 31.922 307 199 5 52 354 45 345 1.04e-45 159
Msa1193890 AT1G06650.2 29.598 348 214 9 17 345 25 360 1.26e-45 160
Msa1193890 AT2G19590.1 31.023 303 184 7 51 346 10 294 4.35e-45 157
Msa1193890 AT1G06620.1 30.088 339 219 7 17 345 26 356 4.60e-45 158
Msa1193890 AT5G51810.1 31.023 303 189 7 27 318 40 333 5.19e-45 159
Msa1193890 AT5G43440.1 29.513 349 229 8 17 354 23 365 8.91e-45 157
Msa1193890 AT2G30830.1 31.176 340 213 9 17 345 20 349 3.87e-44 155
Msa1193890 AT5G07200.1 31.935 310 197 6 20 318 28 334 4.18e-44 156
Msa1193890 AT3G12900.1 31.594 345 218 9 17 353 21 355 5.64e-44 155
Msa1193890 AT1G04350.1 29.714 350 224 10 17 354 21 360 1.35e-43 154
Msa1193890 AT1G15550.1 27.950 322 212 8 26 336 27 339 1.52e-43 154
Msa1193890 AT3G19000.2 33.878 245 136 7 51 275 31 269 1.92e-42 149
Msa1193890 AT1G06645.1 29.070 344 218 10 17 345 38 370 4.90e-42 150
Msa1193890 AT1G78440.1 29.721 323 196 11 41 344 2 312 1.13e-41 149
Msa1193890 AT1G80340.1 28.660 321 211 6 28 342 26 334 1.70e-41 149
Msa1193890 AT3G19010.2 32.932 249 138 6 51 278 27 267 8.56e-41 145
Msa1193890 AT1G80330.1 31.081 296 186 9 51 336 48 335 6.50e-40 144
Msa1193890 AT2G30840.1 27.794 349 235 8 17 354 20 362 6.51e-40 145
Msa1193890 AT1G03400.1 29.412 340 214 9 17 345 19 343 9.24e-40 144
Msa1193890 AT1G03410.2 30.132 302 194 7 52 343 57 351 1.25e-39 144
Msa1193890 AT4G21200.1 31.159 276 171 6 43 311 33 296 1.39e-39 143
Msa1193890 AT1G03410.1 30.132 302 194 7 52 343 94 388 2.72e-39 144
Msa1193890 AT1G44090.1 31.786 280 173 6 52 318 63 337 7.20e-39 142
Msa1193890 AT3G51240.2 31.325 249 165 4 99 344 3 248 1.77e-38 139
Msa1193890 AT5G07480.2 32.301 226 142 5 139 356 25 247 2.18e-38 137
Msa1193890 AT4G25420.2 33.047 233 146 3 52 275 61 292 2.48e-38 139
Msa1193890 AT5G63600.1 31.731 312 185 11 44 345 23 316 4.02e-38 139
Msa1193890 AT3G61400.1 29.480 346 216 12 17 343 24 360 1.14e-37 139
Msa1193890 AT5G63600.2 31.629 313 185 12 44 345 23 317 3.99e-37 136
Msa1193890 AT4G21690.1 27.879 330 209 9 29 343 29 344 1.26e-36 135
Msa1193890 AT1G30040.1 29.236 301 194 11 52 343 31 321 1.31e-36 135
Msa1193890 AT2G30840.3 27.221 349 231 9 17 354 20 356 3.52e-36 134
Msa1193890 AT2G34555.1 31.138 334 199 12 21 343 3 316 5.05e-36 134
Msa1193890 AT3G50210.4 31.864 295 161 9 52 313 8 295 9.12e-36 133
Msa1193890 AT3G50210.1 31.864 295 161 9 52 313 8 295 9.12e-36 133
Msa1193890 AT3G50210.3 31.864 295 161 9 52 313 8 295 9.12e-36 133
Msa1193890 AT3G49620.1 32.042 284 170 7 52 313 34 316 1.39e-35 133
Msa1193890 AT1G06640.2 33.333 273 155 7 17 274 25 285 7.77e-35 130
Msa1193890 AT5G51810.2 30.798 263 162 7 27 278 40 293 1.04e-34 129
Msa1193890 AT1G06640.3 32.847 274 157 7 17 275 25 286 1.68e-34 128
Msa1193890 AT2G25450.1 28.035 346 235 7 17 354 20 359 2.33e-34 130
Msa1193890 AT2G19590.2 30.325 277 168 7 77 346 21 279 3.71e-34 128
Msa1193890 AT1G03400.2 27.174 368 214 10 17 345 19 371 3.78e-34 130
Msa1193890 AT1G06650.1 31.183 279 165 7 17 280 25 291 5.16e-34 128
Msa1193890 AT5G12270.1 27.679 336 230 5 26 354 30 359 5.92e-34 129
Msa1193890 AT1G47990.1 27.885 312 189 11 52 344 15 309 7.27e-34 127
Msa1193890 AT1G02400.1 30.892 314 192 13 46 344 16 319 9.20e-34 127
Msa1193890 AT1G50960.1 32.639 288 166 10 27 302 17 288 1.73e-33 127
Msa1193890 AT5G63595.1 32.800 250 138 8 53 298 26 249 1.99e-32 122
Msa1193890 AT5G43935.1 28.522 291 175 10 51 334 18 282 2.03e-31 120
Msa1193890 AT3G49630.1 29.930 284 176 7 52 313 9 291 1.04e-30 119
Msa1193890 AT5G59540.2 30.224 268 169 6 18 275 25 284 1.30e-30 118
Msa1193890 AT1G06620.2 30.370 270 163 7 17 274 26 282 2.25e-30 117
Msa1193890 AT5G43450.2 31.203 266 166 8 17 274 23 279 3.17e-30 117
Msa1193890 AT3G49630.3 30.337 267 171 7 61 313 22 287 9.26e-30 117
Msa1193890 AT1G04380.2 32.889 225 144 4 52 275 45 263 3.07e-28 111
Msa1193890 AT5G63580.1 31.950 241 143 9 40 273 12 238 5.43e-28 110
Msa1193890 AT5G63580.2 31.707 246 147 9 35 273 7 238 6.10e-28 110
Msa1193890 AT5G43440.2 29.699 266 173 7 17 274 23 282 3.31e-27 109
Msa1193890 AT3G47190.1 27.547 265 167 7 52 302 32 285 9.26e-27 108
Msa1193890 AT2G30840.2 27.444 266 179 6 17 274 20 279 1.12e-26 108
Msa1193890 AT3G61400.2 29.927 274 168 10 17 275 24 288 2.24e-25 104
Msa1193890 AT1G30040.2 30.472 233 143 11 52 275 31 253 1.48e-24 101
Msa1193890 AT4G23340.1 28.713 303 181 12 51 336 9 293 4.31e-23 98.6
Msa1193890 AT1G14130.1 27.946 297 196 8 52 343 9 292 4.73e-23 98.2
Msa1193890 AT3G46500.5 28.383 303 188 13 44 325 9 303 9.75e-23 97.4
Msa1193890 AT3G50210.2 35.838 173 95 4 152 313 46 213 1.42e-22 95.5
Msa1193890 AT1G02400.2 31.707 246 144 12 46 277 16 251 8.58e-22 94.0
Msa1193890 AT3G46500.7 28.102 274 172 12 44 300 9 274 2.40e-21 93.2
Msa1193890 AT5G58660.1 25.714 280 168 9 52 302 34 302 3.75e-21 93.6
Msa1193890 AT3G49630.2 34.146 164 105 3 152 313 56 218 5.09e-21 91.7
Msa1193890 AT1G52820.1 26.837 313 199 11 44 340 3 301 3.27e-19 87.4
Msa1193890 AT3G46490.1 27.707 314 181 13 45 325 10 310 4.23e-18 84.3
Msa1193890 AT1G14120.2 26.623 308 190 6 52 345 8 293 1.12e-17 83.2
Msa1193890 AT1G14120.1 26.623 308 190 6 52 345 8 293 1.12e-17 83.2
Msa1193890 AT1G14120.3 26.623 308 190 6 52 345 8 293 1.12e-17 83.2
Msa1193890 AT3G46490.2 28.179 291 167 12 45 306 10 287 2.66e-17 82.0
Msa1193890 AT2G06960.1 33.333 147 83 5 196 342 15 146 7.49e-16 74.3
Msa1193890 AT1G35190.1 26.471 306 195 10 45 325 5 305 1.02e-15 77.4
Msa1193890 AT4G23340.2 31.538 130 84 3 211 336 47 175 1.47e-15 75.1
Msa1193890 AT1G35190.2 25.658 304 177 11 45 325 5 282 3.73e-15 75.5
Msa1193890 AT4G22870.1 38.462 104 59 2 244 346 2 101 4.39e-15 71.2
Msa1193890 AT1G52800.1 25.237 317 216 12 43 347 1 308 1.10e-14 74.3
Msa1193890 AT3G46500.4 31.953 169 101 6 169 325 1 167 4.69e-14 70.5
Msa1193890 AT3G46500.3 31.333 150 93 5 159 300 53 200 2.32e-13 69.3
Msa1193890 AT4G22870.2 40.230 87 48 2 244 326 40 126 4.72e-13 66.6
Msa1193890 AT4G03070.1 23.985 271 184 7 75 334 41 300 6.88e-13 69.3
Msa1193890 AT3G46500.6 30.818 159 97 6 153 300 13 169 8.70e-13 67.0
Msa1193890 AT3G46500.8 30.818 159 97 6 153 300 13 169 8.70e-13 67.0
Msa1193890 AT4G16765.6 27.273 198 131 6 153 339 45 240 1.60e-12 67.0
Msa1193890 AT4G16765.1 27.273 198 131 6 153 339 45 240 1.60e-12 67.0
Msa1193890 AT4G16765.2 27.273 198 131 6 153 339 45 240 1.60e-12 67.0
Msa1193890 AT4G16765.3 29.193 161 101 6 153 302 45 203 3.93e-11 62.8
Msa1193890 AT1G52820.2 27.419 248 150 11 44 275 3 236 4.66e-11 63.2

Find 70 sgRNAs with CRISPR-Local

Find 230 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTATCAGACGAACACAAAT+TGG 0.265125 8_1:+40693792 Msa1193890:CDS
GGAATACTTGGAAATAAGTT+TGG 0.266243 8_1:-40693865 None:intergenic
GCATTTGTGAGGGGCTTAAT+AGG 0.280096 8_1:-40695542 None:intergenic
CAAGTATTCCCCAACCATTC+AGG 0.301424 8_1:+40693878 Msa1193890:CDS
CAAAGAATGGGGTTTCTTCC+AGG 0.312719 8_1:+40693303 Msa1193890:CDS
AACATATCGTTCTGGAACTT+TGG 0.360365 8_1:-40693155 None:intergenic
CTGAATGGTTGGGGAATACT+TGG 0.360937 8_1:-40693877 None:intergenic
ATCTCAGAAACCAGGAGATA+TGG 0.389174 8_1:+40693747 Msa1193890:CDS
TCTCTTGGTGCCTTCTGTCC+AGG 0.394890 8_1:+40693111 Msa1193890:CDS
CTCCAACTCAATGAAATAGA+AGG 0.399689 8_1:+40695488 Msa1193890:CDS
TAAAACTCCTGCAGTGTTCA+AGG 0.405071 8_1:+40696234 Msa1193890:CDS
GGCCTTCTATTTCATTGAGT+TGG 0.410796 8_1:-40695490 None:intergenic
CGATCATGCATGCAAAGAAT+GGG 0.419677 8_1:+40693291 Msa1193890:CDS
TTCATTGAGTTGGAGAAGAA+TGG 0.432192 8_1:-40695480 None:intergenic
TATTGGCAGTTGATCAATCA+TGG 0.441203 8_1:+40693643 Msa1193890:intron
TGCAGCAATGGATTCAGAAA+TGG 0.442115 8_1:+40693069 None:intergenic
TCGATCATGCATGCAAAGAA+TGG 0.447725 8_1:+40693290 Msa1193890:CDS
TGGGTTGCTTTACTAGCTCC+TGG 0.448571 8_1:-40693129 None:intergenic
GGGAAAGAACCTGAATGGTT+GGG 0.455953 8_1:-40693887 None:intergenic
CCAGGAGATATGGAAGGTTT+CGG 0.455975 8_1:+40693757 Msa1193890:CDS
CTGGCAGATTGAAGAAGTCT+TGG 0.462421 8_1:-40693705 None:intergenic
TTTGGATTTCTCATGTATGA+TGG 0.468214 8_1:-40693847 None:intergenic
TTGCTAGAGTTATTTGAAGA+GGG 0.468917 8_1:+40695365 Msa1193890:CDS
TATTTCTCACGCAAGCTTGA+AGG 0.469607 8_1:+40696286 Msa1193890:CDS
TCATGGAGTCAATCCTTTGT+TGG 0.476589 8_1:+40693660 Msa1193890:CDS
TCAGAAATGGTGAAGAAGCT+TGG 0.483479 8_1:+40693082 Msa1193890:CDS
TAGATACTACAGAAGGGTCT+TGG 0.485325 8_1:-40693186 None:intergenic
CGTTCTGGAACTTTGGAGAT+GGG 0.489316 8_1:-40693148 None:intergenic
GGAGTAATAAGGCTTGCTGC+TGG 0.492651 8_1:-40696211 None:intergenic
TCGTTCTGGAACTTTGGAGA+TGG 0.505928 8_1:-40693149 None:intergenic
AGTGTGGAAGATTTCTTCAA+AGG 0.508864 8_1:+40696262 Msa1193890:CDS
CCGAAACCTTCCATATCTCC+TGG 0.509737 8_1:-40693757 None:intergenic
GAAGCTTGGAACCTCTCTCT+TGG 0.522634 8_1:+40693096 Msa1193890:CDS
AGGGAAAGAACCTGAATGGT+TGG 0.529218 8_1:-40693888 None:intergenic
AGACGAACACAAATTGGAAT+GGG 0.534962 8_1:+40693798 Msa1193890:CDS
AACTTCTGCAAATCGATGAC+GGG 0.542978 8_1:-40693232 None:intergenic
GGAAAGAACCTGAATGGTTG+GGG 0.543399 8_1:-40693886 None:intergenic
TGAGTTGGAGAAGAATGGTA+AGG 0.545815 8_1:-40695475 None:intergenic
CTAATGTCCTTGAACACTGC+AGG 0.547371 8_1:-40696241 None:intergenic
CAGACGAACACAAATTGGAA+TGG 0.548974 8_1:+40693797 Msa1193890:CDS
AAGTTATTGTCTGAAGAAGA+TGG 0.549063 8_1:+40693250 Msa1193890:CDS
ATTGCTAGAGTTATTTGAAG+AGG 0.551019 8_1:+40695364 Msa1193890:CDS
TTTACTAGCTCCTGGACAGA+AGG 0.562789 8_1:-40693121 None:intergenic
TAACTTCTGCAAATCGATGA+CGG 0.563909 8_1:-40693233 None:intergenic
TGGAGTCAATCCTTTGTTGG+TGG 0.568816 8_1:+40693663 Msa1193890:CDS
AAGGAGGGAAAGAACCTGAA+TGG 0.570977 8_1:-40693892 None:intergenic
GGACTCAATCCTCATTCTGA+TGG 0.574193 8_1:+40695446 Msa1193890:CDS
CAATCTAGCACTGTGAAATG+TGG 0.587201 8_1:-40696173 None:intergenic
GATAACAAAAGCATTTGTGA+GGG 0.593285 8_1:-40695552 None:intergenic
ATTGTGCTAGATACTACAGA+AGG 0.595612 8_1:-40693193 None:intergenic
AGCAACAATTAACTCAGAGA+AGG 0.603268 8_1:+40696135 Msa1193890:CDS
GACAGAAGGCACCAAGAGAG+AGG 0.606593 8_1:-40693107 None:intergenic
CTAGAGTTATTTGAAGAGGG+AGG 0.611828 8_1:+40695368 Msa1193890:CDS
CAATTAACTCAGAGAAGGAG+AGG 0.612359 8_1:+40696140 Msa1193890:CDS
GAGTTGGAGAAGAATGGTAA+GGG 0.618943 8_1:-40695474 None:intergenic
AAATCGATGACGGGAACTTG+TGG 0.622972 8_1:-40693223 None:intergenic
AGCACTGTGAAATGTGGCAA+TGG 0.625118 8_1:-40696167 None:intergenic
TGATAACAAAAGCATTTGTG+AGG 0.627924 8_1:-40695553 None:intergenic
CAGAAACCAGGAGATATGGA+AGG 0.637381 8_1:+40693751 Msa1193890:CDS
AGACTTCTTCAATCTGCCAG+TGG 0.639114 8_1:+40693708 Msa1193890:CDS
ATAACAAAAGCATTTGTGAG+GGG 0.642391 8_1:-40695551 None:intergenic
GTTCGACAGATATTGACGAA+TGG 0.645000 8_1:+40696088 Msa1193890:intron
AGGGCAGTACCATCAGAATG+AGG 0.647525 8_1:-40695455 None:intergenic
AAGAGGGAGGTCAAGCAATG+AGG 0.655282 8_1:+40695381 Msa1193890:CDS
AAAATATTATCTCAGAAACC+AGG 0.655611 8_1:+40693739 Msa1193890:CDS
GATCATGCATGCAAAGAATG+GGG 0.659038 8_1:+40693292 Msa1193890:CDS
TTGTGCTAGATACTACAGAA+GGG 0.666114 8_1:-40693192 None:intergenic
AATTGTACATTGATGACATG+AGG 0.667705 8_1:+40696311 Msa1193890:CDS
CAACATTGGAGACATGCTAG+AGG 0.685085 8_1:+40695574 Msa1193890:CDS
AGTGTTCAAGGACATTAGTG+TGG 0.714770 8_1:+40696246 Msa1193890:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAAAAAAAATAAAAAAAA+AGG - chr8_1:40693343-40693362 None:intergenic 0.0%
!!! AAGTCAATAATTTTATAATA+AGG - chr8_1:40693456-40693475 None:intergenic 10.0%
!!! TATAAAATTATTGACTTTTT+AGG + chr8_1:40693459-40693478 Msa1193890:intron 10.0%
!! AAATAATACATAAAAATAGA+AGG - chr8_1:40693914-40693933 None:intergenic 10.0%
!!! TTTATATAAAATCAATTTTG+TGG - chr8_1:40695137-40695156 None:intergenic 10.0%
!! ACAAATTAATAAATCAAATA+TGG + chr8_1:40695636-40695655 Msa1193890:intron 10.0%
!! AAAAATAAAAAAAAAGGAGA+CGG - chr8_1:40693337-40693356 None:intergenic 15.0%
!!! AACAATTGTTTCTTATAATA+AGG + chr8_1:40693560-40693579 Msa1193890:intron 15.0%
!!! AAACATTTTCATTGAAATAT+TGG + chr8_1:40694364-40694383 Msa1193890:intron 15.0%
!! AATTATAAATCCAGAAAATT+AGG + chr8_1:40694713-40694732 Msa1193890:intron 15.0%
!! AAATATATAAAATGATGAAC+AGG - chr8_1:40695234-40695253 None:intergenic 15.0%
!!! TTAGACAATATTTCTTTTTT+TGG + chr8_1:40695728-40695747 Msa1193890:intron 15.0%
!!! TAGACAATATTTCTTTTTTT+GGG + chr8_1:40695729-40695748 Msa1193890:intron 15.0%
!!! AACTCTTTCTTTTAATTAAT+GGG - chr8_1:40695793-40695812 None:intergenic 15.0%
!!! AAACTCTTTCTTTTAATTAA+TGG - chr8_1:40695794-40695813 None:intergenic 15.0%
!! TTATAAATTGTCAATCATAA+TGG - chr8_1:40695897-40695916 None:intergenic 15.0%
!! GTAATATAATATAGTTACTA+GGG - chr8_1:40695993-40696012 None:intergenic 15.0%
!! TGTAATATAATATAGTTACT+AGG - chr8_1:40695994-40696013 None:intergenic 15.0%
!!! TCTATGATTTATGGTTTTAT+TGG + chr8_1:40693429-40693448 Msa1193890:intron 20.0%
!!! TTGTTTCTTATAATAAGGAT+CGG + chr8_1:40693565-40693584 Msa1193890:intron 20.0%
!!! AACCATGATTTTGAAATTAT+TGG + chr8_1:40693626-40693645 Msa1193890:intron 20.0%
!! AATACATAAAAATAGAAGGA+GGG - chr8_1:40693910-40693929 None:intergenic 20.0%
!! TAATACATAAAAATAGAAGG+AGG - chr8_1:40693911-40693930 None:intergenic 20.0%
!!! AAATTTCATCCAAAATTTTG+AGG - chr8_1:40694022-40694041 None:intergenic 20.0%
!! TTGTGAGATGAAAATAATAA+TGG - chr8_1:40694689-40694708 None:intergenic 20.0%
!!! ATCAAAGATTGATATGATTT+TGG - chr8_1:40694782-40694801 None:intergenic 20.0%
!! ACAAAATATAGAGAAATTGA+GGG + chr8_1:40694820-40694839 Msa1193890:intron 20.0%
!!! CACATTAATTTTTTTGCTTT+AGG + chr8_1:40695186-40695205 Msa1193890:intron 20.0%
!!! TTCCATCTTTTTTTATTTGA+AGG - chr8_1:40695514-40695533 None:intergenic 20.0%
!! AAATAAAAAAAGATGGAATG+TGG + chr8_1:40695516-40695535 Msa1193890:CDS 20.0%
!!! TTTATTAATTTGTGCCTTAA+GGG - chr8_1:40695629-40695648 None:intergenic 20.0%
!!! ATTTATTAATTTGTGCCTTA+AGG - chr8_1:40695630-40695649 None:intergenic 20.0%
! ATGGTTACATCTATGATTTA+TGG + chr8_1:40693420-40693439 Msa1193890:intron 25.0%
! AAAATCATGGTTTATGTTAC+CGG - chr8_1:40693618-40693637 None:intergenic 25.0%
! TGCCAATAATTTCAAAATCA+TGG - chr8_1:40693631-40693650 None:intergenic 25.0%
!! TTAAAATTTTCCACCAACAA+AGG - chr8_1:40693676-40693695 None:intergenic 25.0%
! AAAATATTATCTCAGAAACC+AGG + chr8_1:40693739-40693758 Msa1193890:CDS 25.0%
! TAGAATGGTTATATTCTTGA+GGG - chr8_1:40694250-40694269 None:intergenic 25.0%
! TTAGAATGGTTATATTCTTG+AGG - chr8_1:40694251-40694270 None:intergenic 25.0%
! TTGAAGACTGAAATTAAACA+TGG - chr8_1:40694280-40694299 None:intergenic 25.0%
!! TTCTCTTTTGTCTTTTTAGA+AGG - chr8_1:40694399-40694418 None:intergenic 25.0%
!! ATGTAGTTTAGTTGTTGTTA+TGG - chr8_1:40694477-40694496 None:intergenic 25.0%
! CACAAAATATAGAGAAATTG+AGG + chr8_1:40694819-40694838 Msa1193890:intron 25.0%
!!! AAAAGTATTTGAGACCTTTT+TGG - chr8_1:40695090-40695109 None:intergenic 25.0%
!! AAAAAGGTCTCAAATACTTT+TGG + chr8_1:40695089-40695108 Msa1193890:intron 25.0%
!! TTGGTCATGAATTCAAATTT+TGG + chr8_1:40695108-40695127 Msa1193890:intron 25.0%
!!! ACTCTAGCAATTCATTTTTT+GGG - chr8_1:40695355-40695374 None:intergenic 25.0%
!!! AACTCTAGCAATTCATTTTT+TGG - chr8_1:40695356-40695375 None:intergenic 25.0%
!!! AATGCTTTTGTTATCAACAT+TGG + chr8_1:40695560-40695579 Msa1193890:CDS 25.0%
! ATGCTAGAGGTAATTAATTA+AGG + chr8_1:40695587-40695606 Msa1193890:intron 25.0%
! TGCTAGAGGTAATTAATTAA+GGG + chr8_1:40695588-40695607 Msa1193890:intron 25.0%
!! GTTTCATTCAAATTTTTCGT+TGG - chr8_1:40695930-40695949 None:intergenic 25.0%
AAGTTATTGTCTGAAGAAGA+TGG + chr8_1:40693250-40693269 Msa1193890:CDS 30.0%
! AATATTTTCTTCTCTTCCAC+TGG - chr8_1:40693727-40693746 None:intergenic 30.0%
TTTGGATTTCTCATGTATGA+TGG - chr8_1:40693850-40693869 None:intergenic 30.0%
GGAATACTTGGAAATAAGTT+TGG - chr8_1:40693868-40693887 None:intergenic 30.0%
! ATTTAAGACACTTCATCATC+AGG + chr8_1:40693956-40693975 Msa1193890:intron 30.0%
AGCTTAACTGATTACCAAAA+AGG + chr8_1:40694073-40694092 Msa1193890:intron 30.0%
GCTTAACTGATTACCAAAAA+GGG + chr8_1:40694074-40694093 Msa1193890:intron 30.0%
CCATAATAAATCTGTGTTCT+TGG - chr8_1:40694169-40694188 None:intergenic 30.0%
CCAAGAACACAGATTTATTA+TGG + chr8_1:40694166-40694185 Msa1193890:intron 30.0%
AAGACTGAAATTAAACATGG+TGG - chr8_1:40694277-40694296 None:intergenic 30.0%
CATACAGTGAGATTGTTTAA+TGG - chr8_1:40694309-40694328 None:intergenic 30.0%
!! TTGTCTTTTTAGAAGGTCAA+TGG - chr8_1:40694392-40694411 None:intergenic 30.0%
TAACTTCACACAATTCACAT+GGG - chr8_1:40694579-40694598 None:intergenic 30.0%
ATAACTTCACACAATTCACA+TGG - chr8_1:40694580-40694599 None:intergenic 30.0%
! GCTTTTCATTCCTAATTTTC+TGG - chr8_1:40694726-40694745 None:intergenic 30.0%
GTATTCTTCATGAGATCTAA+TGG + chr8_1:40695005-40695024 Msa1193890:intron 30.0%
TATAAAATGATGAACAGGAC+CGG - chr8_1:40695229-40695248 None:intergenic 30.0%
ATTGCTAGAGTTATTTGAAG+AGG + chr8_1:40695364-40695383 Msa1193890:CDS 30.0%
TTGCTAGAGTTATTTGAAGA+GGG + chr8_1:40695365-40695384 Msa1193890:CDS 30.0%
GGCCTTCAAATAAAAAAAGA+TGG + chr8_1:40695509-40695528 Msa1193890:CDS 30.0%
!! ATAACAAAAGCATTTGTGAG+GGG - chr8_1:40695554-40695573 None:intergenic 30.0%
!! GATAACAAAAGCATTTGTGA+GGG - chr8_1:40695555-40695574 None:intergenic 30.0%
!! TGATAACAAAAGCATTTGTG+AGG - chr8_1:40695556-40695575 None:intergenic 30.0%
! CAAGTGTGTAACTTTAAAAG+TGG + chr8_1:40695840-40695859 Msa1193890:intron 30.0%
! AATTGTACATTGATGACATG+AGG + chr8_1:40696311-40696330 Msa1193890:CDS 30.0%
!! AACATATCGTTCTGGAACTT+TGG - chr8_1:40693158-40693177 None:intergenic 35.0%
! TTTTGCTGAACATATCGTTC+TGG - chr8_1:40693166-40693185 None:intergenic 35.0%
TTGTGCTAGATACTACAGAA+GGG - chr8_1:40693195-40693214 None:intergenic 35.0%
ATTGTGCTAGATACTACAGA+AGG - chr8_1:40693196-40693215 None:intergenic 35.0%
TAACTTCTGCAAATCGATGA+CGG - chr8_1:40693236-40693255 None:intergenic 35.0%
TGTATGAGTCACAATCTCAA+TGG + chr8_1:40693401-40693420 Msa1193890:intron 35.0%
! ATATGGTAGTGTTAGTTGTC+CGG + chr8_1:40693596-40693615 Msa1193890:intron 35.0%
TATTGGCAGTTGATCAATCA+TGG + chr8_1:40693643-40693662 Msa1193890:intron 35.0%
TGTATCAGACGAACACAAAT+TGG + chr8_1:40693792-40693811 Msa1193890:CDS 35.0%
AGACGAACACAAATTGGAAT+GGG + chr8_1:40693798-40693817 Msa1193890:CDS 35.0%
!!! GGCTTTAGACCTCAAAATTT+TGG + chr8_1:40694010-40694029 Msa1193890:intron 35.0%
TAACTGATTACCAAAAAGGG+TGG + chr8_1:40694077-40694096 Msa1193890:intron 35.0%
AACTGATTACCAAAAAGGGT+GGG + chr8_1:40694078-40694097 Msa1193890:intron 35.0%
TAATCTAACTTTCCCATGGT+GGG - chr8_1:40694131-40694150 None:intergenic 35.0%
TTAATCTAACTTTCCCATGG+TGG - chr8_1:40694132-40694151 None:intergenic 35.0%
AATGGTTATATTCTTGAGGG+TGG - chr8_1:40694247-40694266 None:intergenic 35.0%
ACTGAAATTAAACATGGTGG+TGG - chr8_1:40694274-40694293 None:intergenic 35.0%
GTGAGATTGTTTAATGGCAA+AGG - chr8_1:40694303-40694322 None:intergenic 35.0%
TATGGATGTATTGTACTGTG+TGG - chr8_1:40694459-40694478 None:intergenic 35.0%
AACTTCACACAATTCACATG+GGG - chr8_1:40694578-40694597 None:intergenic 35.0%
AGATGAACAATCATATGCTC+TGG - chr8_1:40694663-40694682 None:intergenic 35.0%
AGAAATCGTTGATGTTTGTG+TGG + chr8_1:40694933-40694952 Msa1193890:intron 35.0%
!! GGAGAAAAATTGAGTGTTGA+GGG + chr8_1:40694968-40694987 Msa1193890:intron 35.0%
GGTTAAAACTTACTTTCCCA+TGG + chr8_1:40695026-40695045 Msa1193890:intron 35.0%
TAAAACTTACTTTCCCATGG+TGG + chr8_1:40695029-40695048 Msa1193890:intron 35.0%
AAAACTTACTTTCCCATGGT+GGG + chr8_1:40695030-40695049 Msa1193890:intron 35.0%
!! AGTATTTGAGACCTTTTTGG+TGG - chr8_1:40695087-40695106 None:intergenic 35.0%
!!! TCCAATGACTTTTTCTGGTT+GGG - chr8_1:40695429-40695448 None:intergenic 35.0%
!! TTGAGTCCAATGACTTTTTC+TGG - chr8_1:40695434-40695453 None:intergenic 35.0%
!! TTCATTGAGTTGGAGAAGAA+TGG - chr8_1:40695483-40695502 None:intergenic 35.0%
CTCCAACTCAATGAAATAGA+AGG + chr8_1:40695488-40695507 Msa1193890:CDS 35.0%
!! AATGTTAACTTGTGCCCTTA+AGG + chr8_1:40695612-40695631 Msa1193890:intron 35.0%
TTTCTTAACATGTGCCCTAA+GGG + chr8_1:40695752-40695771 Msa1193890:intron 35.0%
AGCAACAATTAACTCAGAGA+AGG + chr8_1:40696135-40696154 Msa1193890:CDS 35.0%
!!! CAGGAGTTTTAGGAGTAATA+AGG - chr8_1:40696225-40696244 None:intergenic 35.0%
AGTGTGGAAGATTTCTTCAA+AGG + chr8_1:40696262-40696281 Msa1193890:CDS 35.0%
TCAGAAATGGTGAAGAAGCT+TGG + chr8_1:40693082-40693101 Msa1193890:CDS 40.0%
TAGATACTACAGAAGGGTCT+TGG - chr8_1:40693189-40693208 None:intergenic 40.0%
AACTTCTGCAAATCGATGAC+GGG - chr8_1:40693235-40693254 None:intergenic 40.0%
TCGATCATGCATGCAAAGAA+TGG + chr8_1:40693290-40693309 Msa1193890:CDS 40.0%
CGATCATGCATGCAAAGAAT+GGG + chr8_1:40693291-40693310 Msa1193890:CDS 40.0%
GATCATGCATGCAAAGAATG+GGG + chr8_1:40693292-40693311 Msa1193890:CDS 40.0%
AAGGATCGGATGAGCTAATA+TGG + chr8_1:40693579-40693598 Msa1193890:intron 40.0%
TCATGGAGTCAATCCTTTGT+TGG + chr8_1:40693660-40693679 Msa1193890:CDS 40.0%
ATCTCAGAAACCAGGAGATA+TGG + chr8_1:40693747-40693766 Msa1193890:CDS 40.0%
CAGACGAACACAAATTGGAA+TGG + chr8_1:40693797-40693816 Msa1193890:CDS 40.0%
! ATGCTAAATCCCACCCTTTT+TGG - chr8_1:40694090-40694109 None:intergenic 40.0%
AAAAAGGGTGGGATTTAGCA+TGG + chr8_1:40694089-40694108 Msa1193890:intron 40.0%
AAAAGGGTGGGATTTAGCAT+GGG + chr8_1:40694090-40694109 Msa1193890:intron 40.0%
!!! AGTGAAGTTTTTTCCCACCA+TGG + chr8_1:40694115-40694134 Msa1193890:intron 40.0%
!!! GTGAAGTTTTTTCCCACCAT+GGG + chr8_1:40694116-40694135 Msa1193890:intron 40.0%
GGCTTAATCTAACTTTCCCA+TGG - chr8_1:40694135-40694154 None:intergenic 40.0%
GTGTTCTTGGCTAGATCTAA+TGG - chr8_1:40694156-40694175 None:intergenic 40.0%
!! AAACATGGTGGTGGTTAGAA+TGG - chr8_1:40694265-40694284 None:intergenic 40.0%
ACTTCACACAATTCACATGG+GGG - chr8_1:40694577-40694596 None:intergenic 40.0%
CAATCATATGCTCTGGTGTA+AGG - chr8_1:40694656-40694675 None:intergenic 40.0%
AGAGAAATTGAGGGAGATCT+AGG + chr8_1:40694829-40694848 Msa1193890:intron 40.0%
GGAGATCTAGGTGTTAAACA+GGG + chr8_1:40694841-40694860 Msa1193890:intron 40.0%
GAGATCTAGGTGTTAAACAG+GGG + chr8_1:40694842-40694861 Msa1193890:intron 40.0%
TTTGTGTGGTTGAAGAGAGA+GGG + chr8_1:40694947-40694966 Msa1193890:intron 40.0%
! GGGAGAAAAATTGAGTGTTG+AGG + chr8_1:40694967-40694986 Msa1193890:intron 40.0%
! AGTGTTGAGGGAGTATGATA+AGG + chr8_1:40694980-40694999 Msa1193890:intron 40.0%
! GTGTTGAGGGAGTATGATAA+GGG + chr8_1:40694981-40695000 Msa1193890:intron 40.0%
!! TTGGTGGTGGGATTTAGTAT+GGG - chr8_1:40695071-40695090 None:intergenic 40.0%
!! TTTGGTGGTGGGATTTAGTA+TGG - chr8_1:40695072-40695091 None:intergenic 40.0%
ACTAAATCCCACCACCAAAA+AGG + chr8_1:40695073-40695092 Msa1193890:intron 40.0%
!! TTTGAGACCTTTTTGGTGGT+GGG - chr8_1:40695083-40695102 None:intergenic 40.0%
!! ATTTGAGACCTTTTTGGTGG+TGG - chr8_1:40695084-40695103 None:intergenic 40.0%
CTAGAGTTATTTGAAGAGGG+AGG + chr8_1:40695368-40695387 Msa1193890:CDS 40.0%
!!! CCAATGACTTTTTCTGGTTG+GGG - chr8_1:40695428-40695447 None:intergenic 40.0%
!! GTCCAATGACTTTTTCTGGT+TGG - chr8_1:40695430-40695449 None:intergenic 40.0%
GAGTTGGAGAAGAATGGTAA+GGG - chr8_1:40695477-40695496 None:intergenic 40.0%
! TGAGTTGGAGAAGAATGGTA+AGG - chr8_1:40695478-40695497 None:intergenic 40.0%
GGCCTTCTATTTCATTGAGT+TGG - chr8_1:40695493-40695512 None:intergenic 40.0%
GTTTCTTAACATGTGCCCTA+AGG + chr8_1:40695751-40695770 Msa1193890:intron 40.0%
!! AGTGTTAACTTGTGCCCTTA+GGG - chr8_1:40695769-40695788 None:intergenic 40.0%
!! TAGTGTTAACTTGTGCCCTT+AGG - chr8_1:40695770-40695789 None:intergenic 40.0%
GTTCGACAGATATTGACGAA+TGG + chr8_1:40696088-40696107 Msa1193890:intron 40.0%
CAATTAACTCAGAGAAGGAG+AGG + chr8_1:40696140-40696159 Msa1193890:CDS 40.0%
CAATCTAGCACTGTGAAATG+TGG - chr8_1:40696176-40696195 None:intergenic 40.0%
! TTGAACACTGCAGGAGTTTT+AGG - chr8_1:40696235-40696254 None:intergenic 40.0%
TAAAACTCCTGCAGTGTTCA+AGG + chr8_1:40696234-40696253 Msa1193890:CDS 40.0%
AGTGTTCAAGGACATTAGTG+TGG + chr8_1:40696246-40696265 Msa1193890:CDS 40.0%
TATTTCTCACGCAAGCTTGA+AGG + chr8_1:40696286-40696305 Msa1193890:CDS 40.0%
TTTACTAGCTCCTGGACAGA+AGG - chr8_1:40693124-40693143 None:intergenic 45.0%
!! CGTTCTGGAACTTTGGAGAT+GGG - chr8_1:40693151-40693170 None:intergenic 45.0%
!! TCGTTCTGGAACTTTGGAGA+TGG - chr8_1:40693152-40693171 None:intergenic 45.0%
!! AAATCGATGACGGGAACTTG+TGG - chr8_1:40693226-40693245 None:intergenic 45.0%
CAAAGAATGGGGTTTCTTCC+AGG + chr8_1:40693303-40693322 Msa1193890:CDS 45.0%
TGGAGTCAATCCTTTGTTGG+TGG + chr8_1:40693663-40693682 Msa1193890:CDS 45.0%
CTGGCAGATTGAAGAAGTCT+TGG - chr8_1:40693708-40693727 None:intergenic 45.0%
AGACTTCTTCAATCTGCCAG+TGG + chr8_1:40693708-40693727 Msa1193890:CDS 45.0%
CAGAAACCAGGAGATATGGA+AGG + chr8_1:40693751-40693770 Msa1193890:CDS 45.0%
CCAGGAGATATGGAAGGTTT+CGG + chr8_1:40693757-40693776 Msa1193890:CDS 45.0%
CTGAATGGTTGGGGAATACT+TGG - chr8_1:40693880-40693899 None:intergenic 45.0%
CAAGTATTCCCCAACCATTC+AGG + chr8_1:40693878-40693897 Msa1193890:CDS 45.0%
GGAAAGAACCTGAATGGTTG+GGG - chr8_1:40693889-40693908 None:intergenic 45.0%
GGGAAAGAACCTGAATGGTT+GGG - chr8_1:40693890-40693909 None:intergenic 45.0%
AGGGAAAGAACCTGAATGGT+TGG - chr8_1:40693891-40693910 None:intergenic 45.0%
AAGGAGGGAAAGAACCTGAA+TGG - chr8_1:40693895-40693914 None:intergenic 45.0%
AGACACTTCATCATCAGGAC+CGG + chr8_1:40693961-40693980 Msa1193890:intron 45.0%
!! GTTTGGGTTTGTTGACCCTT+AGG - chr8_1:40693987-40694006 None:intergenic 45.0%
AGGGTCAACAAACCCAAACA+AGG + chr8_1:40693988-40694007 Msa1193890:intron 45.0%
GGGTCAACAAACCCAAACAA+GGG + chr8_1:40693989-40694008 Msa1193890:intron 45.0%
! GAGGTCTAAAGCCCTTGTTT+GGG - chr8_1:40694003-40694022 None:intergenic 45.0%
! TGAGGTCTAAAGCCCTTGTT+TGG - chr8_1:40694004-40694023 None:intergenic 45.0%
AGGAGGTTGAGGATAGAGAT+AGG - chr8_1:40694220-40694239 None:intergenic 45.0%
ATATTCTTGAGGGTGGAGAG+AGG - chr8_1:40694240-40694259 None:intergenic 45.0%
TTCACATGGGGGAATTGTAG+AGG - chr8_1:40694566-40694585 None:intergenic 45.0%
AGTTCCGTTCCTAGCTTCAT+GGG + chr8_1:40694613-40694632 Msa1193890:intron 45.0%
GGGAGATCTAGGTGTTAAAC+AGG + chr8_1:40694840-40694859 Msa1193890:intron 45.0%
ATCTAGGTGTTAAACAGGGG+TGG + chr8_1:40694845-40694864 Msa1193890:intron 45.0%
GTTTGTGTGGTTGAAGAGAG+AGG + chr8_1:40694946-40694965 Msa1193890:intron 45.0%
!!! GGCTAGTTTTTTCCCACCAT+GGG - chr8_1:40695045-40695064 None:intergenic 45.0%
!!! AGGCTAGTTTTTTCCCACCA+TGG - chr8_1:40695046-40695065 None:intergenic 45.0%
GGTGGGATTTAGTATGGGAA+AGG - chr8_1:40695066-40695085 None:intergenic 45.0%
GGCCTCTTAATCTGTTATGC+CGG + chr8_1:40695207-40695226 Msa1193890:intron 45.0%
GACCGGCATAACAGATTAAG+AGG - chr8_1:40695212-40695231 None:intergenic 45.0%
!!! ACTTTTTCTGGTTGGGGACA+AGG - chr8_1:40695422-40695441 None:intergenic 45.0%
CCCCAACCAGAAAAAGTCAT+TGG + chr8_1:40695425-40695444 Msa1193890:CDS 45.0%
GGACTCAATCCTCATTCTGA+TGG + chr8_1:40695446-40695465 Msa1193890:CDS 45.0%
GCATTTGTGAGGGGCTTAAT+AGG - chr8_1:40695545-40695564 None:intergenic 45.0%
CAACATTGGAGACATGCTAG+AGG + chr8_1:40695574-40695593 Msa1193890:CDS 45.0%
AGCACTGTGAAATGTGGCAA+TGG - chr8_1:40696170-40696189 None:intergenic 45.0%
CTAATGTCCTTGAACACTGC+AGG - chr8_1:40696244-40696263 None:intergenic 45.0%
!!! AATTTCTTATTTTTATTTTA+TGG - chr8_1:40694748-40694767 None:intergenic 5.0%
!!! TCTTAAAATAATATTTTTAA+AGG + chr8_1:40695162-40695181 Msa1193890:intron 5.0%
GAAGCTTGGAACCTCTCTCT+TGG + chr8_1:40693096-40693115 Msa1193890:CDS 50.0%
! TGGGTTGCTTTACTAGCTCC+TGG - chr8_1:40693132-40693151 None:intergenic 50.0%
AAGGAGACGGTGTTCAAACC+TGG - chr8_1:40693324-40693343 None:intergenic 50.0%
CCGAAACCTTCCATATCTCC+TGG - chr8_1:40693760-40693779 None:intergenic 50.0%
GAGTTCCGTTCCTAGCTTCA+TGG + chr8_1:40694612-40694631 Msa1193890:intron 50.0%
CCAACCCATGAAGCTAGGAA+CGG - chr8_1:40694620-40694639 None:intergenic 50.0%
CGTTCCTAGCTTCATGGGTT+GGG + chr8_1:40694618-40694637 Msa1193890:intron 50.0%
TAGGTGTTAAACAGGGGTGG+TGG + chr8_1:40694848-40694867 Msa1193890:intron 50.0%
AGAGAGAGAGAGAGAGAGAG+AGG + chr8_1:40694885-40694904 Msa1193890:intron 50.0%
AAGAGGGAGGTCAAGCAATG+AGG + chr8_1:40695381-40695400 Msa1193890:CDS 50.0%
!!! TTTTCTGGTTGGGGACAAGG+AGG - chr8_1:40695419-40695438 None:intergenic 50.0%
AGGGCAGTACCATCAGAATG+AGG - chr8_1:40695458-40695477 None:intergenic 50.0%
!! GGAGTAATAAGGCTTGCTGC+TGG - chr8_1:40696214-40696233 None:intergenic 50.0%
!! GACAGAAGGCACCAAGAGAG+AGG - chr8_1:40693110-40693129 None:intergenic 55.0%
!! TCTCTTGGTGCCTTCTGTCC+AGG + chr8_1:40693111-40693130 Msa1193890:CDS 55.0%
TCATCATCAGGACCGGCCTA+AGG + chr8_1:40693968-40693987 Msa1193890:intron 55.0%
CATCATCAGGACCGGCCTAA+GGG + chr8_1:40693969-40693988 Msa1193890:intron 55.0%
!! GGGTTTGTTGACCCTTAGGC+CGG - chr8_1:40693983-40694002 None:intergenic 55.0%
TTCTTGAGGGTGGAGAGAGG+AGG - chr8_1:40694237-40694256 None:intergenic 55.0%
CCGTTCCTAGCTTCATGGGT+TGG + chr8_1:40694617-40694636 Msa1193890:intron 55.0%
CTCACCCAACCCATGAAGCT+AGG - chr8_1:40694625-40694644 None:intergenic 55.0%
! GTGTTAAACAGGGGTGGTGG+TGG + chr8_1:40694851-40694870 Msa1193890:intron 55.0%
!! TTAAACAGGGGTGGTGGTGG+TGG + chr8_1:40694854-40694873 Msa1193890:intron 55.0%
GAGAGAGAGAGAGAGAGAGG+AGG + chr8_1:40694892-40694911 Msa1193890:intron 55.0%
AGAGAGAGAGAGAGAGGAGG+AGG + chr8_1:40694895-40694914 Msa1193890:intron 55.0%
AGGGTGGAGAGAGGAGGTTG+AGG - chr8_1:40694231-40694250 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 40693076 40696348 40693076 ID=Msa1193890;Name=Msa1193890
chr8_1 mRNA 40693076 40696348 40693076 ID=Msa1193890-mRNA-1;Parent=Msa1193890;Name=Msa1193890-mRNA-1;_AED=0.02;_eAED=0.02;_QI=0|0.33|0|1|1|1|4|0|357
chr8_1 exon 40693076 40693324 40693076 ID=Msa1193890-mRNA-1:exon:13159;Parent=Msa1193890-mRNA-1
chr8_1 exon 40693652 40693899 40693652 ID=Msa1193890-mRNA-1:exon:13160;Parent=Msa1193890-mRNA-1
chr8_1 exon 40695271 40695595 40695271 ID=Msa1193890-mRNA-1:exon:13161;Parent=Msa1193890-mRNA-1
chr8_1 exon 40696097 40696348 40696097 ID=Msa1193890-mRNA-1:exon:13162;Parent=Msa1193890-mRNA-1
chr8_1 CDS 40693076 40693324 40693076 ID=Msa1193890-mRNA-1:cds;Parent=Msa1193890-mRNA-1
chr8_1 CDS 40693652 40693899 40693652 ID=Msa1193890-mRNA-1:cds;Parent=Msa1193890-mRNA-1
chr8_1 CDS 40695271 40695595 40695271 ID=Msa1193890-mRNA-1:cds;Parent=Msa1193890-mRNA-1
chr8_1 CDS 40696097 40696348 40696097 ID=Msa1193890-mRNA-1:cds;Parent=Msa1193890-mRNA-1
Gene Sequence

>Msa1193890

ATGGATTCAGAAATGGTGAAGAAGCTTGGAACCTCTCTCTTGGTGCCTTCTGTCCAGGAGCTAGTAAAGCAACCCATCTCCAAAGTTCCAGAACGATATGTTCAGCAAAACCAAGACCCTTCTGTAGTATCTAGCACAATCTCTTTACCACAAGTTCCCGTCATCGATTTGCAGAAGTTATTGTCTGAAGAAGATGGAACTGAACTACAAAAATTCGATCATGCATGCAAAGAATGGGGTTTCTTCCAGTTGATCAATCATGGAGTCAATCCTTTGTTGGTGGAAAATTTTAAAAAACTTGTCCAAGACTTCTTCAATCTGCCAGTGGAAGAGAAGAAAATATTATCTCAGAAACCAGGAGATATGGAAGGTTTCGGTCAGATGTTTGTTGTATCAGACGAACACAAATTGGAATGGGCAGATTTGTTCTACATTGTCACTCATCCATCATACATGAGAAATCCAAACTTATTTCCAAGTATTCCCCAACCATTCAGAGAAAATCTAGAGATGTACTCTTTAGAACTGAAAAATCTATGTGTGACGATCGTTGAATTTATGTCAAAAGCATTAAAGATCCCAAAAAATGAATTGCTAGAGTTATTTGAAGAGGGAGGTCAAGCAATGAGGATGAATTACTATCCTCCTTGTCCCCAACCAGAAAAAGTCATTGGACTCAATCCTCATTCTGATGGTACTGCCCTTACCATTCTTCTCCAACTCAATGAAATAGAAGGCCTTCAAATAAAAAAAGATGGAATGTGGATTCCTATTAAGCCCCTCACAAATGCTTTTGTTATCAACATTGGAGACATGCTAGAGATATTGACGAATGGTATTTATCGAAGTATTGAACATCGAGCAACAATTAACTCAGAGAAGGAGAGGATTTCCATTGCCACATTTCACAGTGCTAGATTGAATGCAATTCTTGCTCCAGCAGCAAGCCTTATTACTCCTAAAACTCCTGCAGTGTTCAAGGACATTAGTGTGGAAGATTTCTTCAAAGGATATTTCTCACGCAAGCTTGAAGGAAAATTGTACATTGATGACATGAGGATGAAAAATGAGTGA
Protein sequence

>Msa1193890

MDSEMVKKLGTSLLVPSVQELVKQPISKVPERYVQQNQDPSVVSSTISLPQVPVIDLQKLLSEEDGTELQKFDHACKEWGFFQLINHGVNPLLVENFKKLVQDFFNLPVEEKKILSQKPGDMEGFGQMFVVSDEHKLEWADLFYIVTHPSYMRNPNLFPSIPQPFRENLEMYSLELKNLCVTIVEFMSKALKIPKNELLELFEEGGQAMRMNYYPPCPQPEKVIGLNPHSDGTALTILLQLNEIEGLQIKKDGMWIPIKPLTNAFVINIGDMLEILTNGIYRSIEHRATINSEKERISIATFHSARLNAILAPAASLITPKTPAVFKDISVEDFFKGYFSRKLEGKLYIDDMRMKNE*