AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1195270

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1195270 MtrunA17_Chr8g0342811 98.450 1226 19 0 1 1226 1 1226 0.0 2520
Msa1195270 MtrunA17_Chr2g0329991 83.525 1220 198 3 5 1223 6 1223 0.0 2165
Msa1195270 MtrunA17_Chr4g0062251 56.522 1219 484 11 1 1205 1 1187 0.0 1384
Msa1195270 MtrunA17_Chr8g0368691 54.597 1240 508 11 1 1215 1 1210 0.0 1374
Msa1195270 MtrunA17_Chr6g0450601 54.265 1231 497 8 7 1215 6 1192 0.0 1353
Msa1195270 MtrunA17_Chr0c05g0492131 54.061 1219 508 8 6 1208 1 1183 0.0 1333
Msa1195270 MtrunA17_Chr3g0091611 53.970 1184 494 7 9 1177 5 1152 0.0 1311
Msa1195270 MtrunA17_Chr5g0415271 43.647 1157 589 14 35 1174 19 1129 0.0 960
Msa1195270 MtrunA17_Chr8g0363911 43.997 1166 590 15 24 1172 28 1147 0.0 957
Msa1195270 MtrunA17_Chr3g0078371 35.121 1156 656 21 40 1177 120 1199 0.0 668
Msa1195270 MtrunA17_Chr8g0355251 35.603 1160 650 26 40 1173 69 1157 0.0 654
Msa1195270 MtrunA17_Chr7g0244991 34.783 1196 648 27 40 1173 142 1267 0.0 652
Msa1195270 MtrunA17_Chr2g0324791 32.771 1126 623 22 58 1167 17 1024 0.0 563
Msa1195270 MtrunA17_Chr2g0298871 24.714 437 227 16 568 990 564 912 6.19e-17 86.7
Msa1195270 MtrunA17_Chr8g0382071 22.122 443 238 9 534 963 488 836 9.50e-14 76.3
Msa1195270 MtrunA17_Chr2g0334221 24.716 352 168 11 560 899 71 337 1.56e-13 73.6
Msa1195270 MtrunA17_Chr1g0173111 23.577 369 191 11 608 963 543 833 1.29e-11 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1195270 AT1G17500.2 73.753 1223 303 4 1 1222 1 1206 0.0 1902
Msa1195270 AT1G17500.1 73.753 1223 303 4 1 1222 1 1206 0.0 1902
Msa1195270 AT1G54280.2 73.109 1216 322 4 12 1222 12 1227 0.0 1883
Msa1195270 AT1G54280.3 73.109 1216 322 4 12 1222 12 1227 0.0 1883
Msa1195270 AT1G54280.1 73.109 1216 322 4 12 1222 12 1227 0.0 1883
Msa1195270 AT3G13900.1 73.438 1216 316 5 12 1222 12 1225 0.0 1877
Msa1195270 AT1G72700.1 72.268 1226 328 5 1 1222 1 1218 0.0 1869
Msa1195270 AT1G72700.3 72.268 1226 328 5 1 1222 1 1218 0.0 1869
Msa1195270 AT1G72700.2 72.268 1226 328 5 1 1222 1 1218 0.0 1869
Msa1195270 AT3G13900.2 74.545 935 231 5 12 941 12 944 0.0 1435
Msa1195270 AT1G68710.2 56.152 1211 490 7 10 1208 13 1194 0.0 1391
Msa1195270 AT1G68710.1 56.152 1211 490 7 10 1208 13 1194 0.0 1391
Msa1195270 AT3G25610.1 56.096 1214 479 11 10 1206 11 1187 0.0 1386
Msa1195270 AT1G68710.3 55.053 1237 489 8 10 1208 13 1220 0.0 1379
Msa1195270 AT1G13210.1 55.465 1226 488 13 1 1206 1 1188 0.0 1367
Msa1195270 AT3G13900.3 73.533 903 232 5 12 909 12 912 0.0 1361
Msa1195270 AT3G27870.1 54.630 1188 486 7 4 1173 3 1155 0.0 1343
Msa1195270 AT1G26130.1 54.928 1187 487 7 4 1178 6 1156 0.0 1340
Msa1195270 AT1G26130.2 54.882 1188 487 7 4 1178 6 1157 0.0 1340
Msa1195270 AT1G26130.4 54.882 1188 487 7 4 1178 6 1157 0.0 1340
Msa1195270 AT1G26130.3 54.882 1188 487 7 4 1178 6 1157 0.0 1340
Msa1195270 AT3G27870.2 55.621 1023 401 7 4 1008 3 990 0.0 1152
Msa1195270 AT3G27870.3 55.366 997 394 6 195 1173 1 964 0.0 1149
Msa1195270 AT1G59820.1 44.518 1213 594 19 24 1217 20 1172 0.0 996
Msa1195270 AT5G04930.1 36.214 1157 648 19 40 1182 67 1147 0.0 673
Msa1195270 AT5G44240.2 31.940 1124 633 28 59 1167 18 1024 3.81e-163 516
Msa1195270 AT5G44240.1 31.675 1146 648 29 37 1167 31 1056 8.08e-163 516
Msa1195270 AT3G57330.2 24.595 309 143 9 608 904 484 714 1.85e-11 69.3
Msa1195270 AT3G57330.1 24.595 309 143 9 608 904 539 769 2.35e-11 68.9

Find 310 sgRNAs with CRISPR-Local

Find 515 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTTAATATGTTGTCCTTAA+TGG 0.112350 8_1:+43109809 None:intergenic
TTCAAAACCAAATCCCTTTA+TGG 0.113467 8_1:+43111421 None:intergenic
TCTTGTAGTGCTTGATTTCT+TGG 0.123119 8_1:+43107543 None:intergenic
CATTAGTACCATAGCATTTA+TGG 0.174870 8_1:-43112005 Msa1195270:CDS
GGATTCAACATCTGTTTATA+TGG 0.178043 8_1:-43107778 Msa1195270:CDS
AAATGTAAGCACATTGTATT+TGG 0.181752 8_1:+43112762 None:intergenic
TCGGACCTGCGCCTATTTAT+TGG 0.195459 8_1:-43107661 Msa1195270:CDS
TAAGCATCAAAGAATTTAAA+AGG 0.207092 8_1:+43107297 None:intergenic
ACCAAGCATTTAAATGATTA+TGG 0.216468 8_1:-43110541 Msa1195270:CDS
CTCAAGCTGGTCTTAAGATT+TGG 0.221142 8_1:-43110184 Msa1195270:CDS
CTTGAAGGTTAAAAGATCTT+TGG 0.226688 8_1:-43112353 Msa1195270:CDS
CAAGAACGGAAAAGCGTATT+TGG 0.232057 8_1:-43110572 Msa1195270:CDS
CTCGTAGCTGCAAGAGAATT+TGG 0.248592 8_1:-43111236 Msa1195270:CDS
TTTGATTGGTATAGAATATT+AGG 0.252652 8_1:-43107986 Msa1195270:CDS
TGCTAATATATACTTTCTTT+TGG 0.268469 8_1:-43112704 Msa1195270:CDS
CTTAACACCGCAGGCCATTA+AGG 0.290860 8_1:-43109823 Msa1195270:intron
CAATGTTCACTTGCATAATC+TGG 0.293233 8_1:-43107844 Msa1195270:CDS
TAAAAGCTAAATCACTATCT+AGG 0.293839 8_1:+43112317 None:intergenic
ATTACCGCTCTCATTCTCTA+TGG 0.301209 8_1:-43111878 Msa1195270:CDS
ATCATACTCAATGCACTAAA+AGG 0.304897 8_1:+43112652 None:intergenic
CGGACCTGCGCCTATTTATT+GGG 0.308188 8_1:-43107660 Msa1195270:CDS
GGCGTATGTACCACCACTTT+GGG 0.311497 8_1:+43111963 None:intergenic
CACTAGCTCTTTCCTATAGA+AGG 0.318800 8_1:-43110501 Msa1195270:CDS
AATGTTGTTGCCCAATAAAT+AGG 0.330164 8_1:+43107650 None:intergenic
TTAAATGATTATGGAGAAAC+AGG 0.331489 8_1:-43110532 Msa1195270:CDS
TCAAGCTGGTCTTAAGATTT+GGG 0.332589 8_1:-43110183 Msa1195270:CDS
TGAGCGGGTCTCAGATATTA+TGG 0.338659 8_1:-43110395 Msa1195270:CDS
CTCCTTTAGCATTTGTTGTC+GGG 0.340729 8_1:-43112627 Msa1195270:CDS
GCCTCATCCACTTCAAGGTC+CGG 0.344055 8_1:-43112869 Msa1195270:CDS
GAGTACCTGTTTGGTATCAT+TGG 0.344812 8_1:+43109921 None:intergenic
AAGCAGGCCATAAAGGGATT+TGG 0.345533 8_1:-43111428 Msa1195270:CDS
CCCAAGTTCCTTGGAATGGC+TGG 0.352645 8_1:-43111914 Msa1195270:CDS
CGAGAGCCTCAATCAGTAAA+TGG 0.354412 8_1:+43107681 None:intergenic
ACCGTCTCATGAATTGTAAT+TGG 0.357028 8_1:-43111394 Msa1195270:CDS
GATGTTGAATCCATGTAAAA+TGG 0.357294 8_1:+43107789 None:intergenic
ATCAGCCCCAACGGCTGCTT+TGG 0.363524 8_1:+43110432 None:intergenic
GGATCAAAAGCAGGCCATAA+AGG 0.364435 8_1:-43111435 Msa1195270:CDS
GCATTTGCATTAATTATTGA+TGG 0.366456 8_1:-43109735 Msa1195270:CDS
CCACAAGATCCCCTTCAAAA+AGG 0.366640 8_1:-43112096 Msa1195270:CDS
TATTGTGTTATAATGAAAAC+GGG 0.366901 8_1:-43107274 Msa1195270:three_prime_UTR
GAATGCTTGATCGTAGAATA+TGG 0.368417 8_1:+43107910 None:intergenic
CGTGAAAGAATATCTGCTTC+AGG 0.368923 8_1:-43111173 Msa1195270:CDS
CCCAGCCATTCCAAGGAACT+TGG 0.369915 8_1:+43111913 None:intergenic
GATTCAACATCTGTTTATAT+GGG 0.370795 8_1:-43107777 Msa1195270:CDS
ACAATCCTCTCTGATAAAAC+TGG 0.371296 8_1:-43111698 Msa1195270:CDS
ATTTGTTGTCGGGCTTAGTA+TGG 0.372125 8_1:-43112617 Msa1195270:CDS
TTCCTGTAGTTTGCTTCGAC+AGG 0.374883 8_1:-43109986 Msa1195270:CDS
TCTTGCAGTGAACCCAATCT+TGG 0.375348 8_1:+43107463 None:intergenic
TTCGTCGGAAGTTTGTTTAC+AGG 0.375747 8_1:-43108127 Msa1195270:intron
TCCATAATCATTTAAATGCT+TGG 0.376988 8_1:+43110540 None:intergenic
AAGTGTAAAGACTGGGGTTC+GGG 0.377760 8_1:+43112263 None:intergenic
AGATTCACGCAGGTTCGTTC+AGG 0.379655 8_1:-43112578 Msa1195270:CDS
GGGGACAAGGGGCAGTTTGA+TGG 0.379871 8_1:-43113071 Msa1195270:five_prime_UTR
TTCAAATTTGAATGAAGAGT+TGG 0.382649 8_1:-43111732 Msa1195270:CDS
CCGTGCATCAGCTGGAGTTC+CGG 0.386953 8_1:+43111757 None:intergenic
ACATCTGACTTGGCTTCTCT+TGG 0.392538 8_1:-43107872 Msa1195270:CDS
AGGCTGGTAAAACAAGGAAC+TGG 0.398950 8_1:-43109318 Msa1195270:CDS
GCTCCTTTAGCATTTGTTGT+CGG 0.399741 8_1:-43112628 Msa1195270:CDS
TAGAAGACAAACTGCAGAAA+GGG 0.400207 8_1:-43110339 Msa1195270:CDS
GATCAAGCATTCCGTGTTGA+TGG 0.401744 8_1:-43107899 Msa1195270:CDS
ATGATACAAGAAGCAGATAT+TGG 0.402075 8_1:-43109252 Msa1195270:CDS
CGAAAAGTTAATCACCATAA+AGG 0.402606 8_1:-43112538 Msa1195270:CDS
TACTGGCGGTCAATTTCGTC+AGG 0.406335 8_1:+43111941 None:intergenic
ACGAGAAAAGCCCCTTCATC+TGG 0.407753 8_1:+43111254 None:intergenic
AATGTCAATTATGTACGTAC+TGG 0.414042 8_1:+43107371 None:intergenic
AGGAACACCGAATACATATA+TGG 0.419124 8_1:-43112163 Msa1195270:CDS
GACCACTCCATATATGTATT+CGG 0.420328 8_1:+43112156 None:intergenic
ATATTGTGTTATAATGAAAA+CGG 0.421975 8_1:-43107275 Msa1195270:three_prime_UTR
GCAAGACAAGAAACCAAGAT+TGG 0.424285 8_1:-43107476 Msa1195270:CDS
TACCTCTTTCTCATGATGTA+TGG 0.424378 8_1:-43107737 Msa1195270:CDS
AATAAAATGTCATCGACATT+GGG 0.426859 8_1:+43111362 None:intergenic
CACGTGTGAAAATACTTGAC+TGG 0.429002 8_1:+43111192 None:intergenic
TCAAATTTGAATGAAGAGTT+GGG 0.429733 8_1:-43111731 Msa1195270:CDS
TCAACATTGTCCCTCCCGTT+TGG 0.433293 8_1:-43113824 Msa1195270:intron
AGAAAGCCAAAGCAGCCGTT+GGG 0.436092 8_1:-43110438 Msa1195270:CDS
GAAAGGAAAACGAACCAAAC+GGG 0.440483 8_1:+43113810 None:intergenic
TCCTCCGTCGTCATCTTCTT+CGG 0.441549 8_1:-43107941 Msa1195270:CDS
TAGAATGTCTTGGTTAATGA+AGG 0.442653 8_1:+43111796 None:intergenic
TCTATTGCGGGTACTCCATA+TGG 0.445509 8_1:-43111638 Msa1195270:CDS
GATCAAAAGCAGGCCATAAA+GGG 0.445801 8_1:-43111434 Msa1195270:CDS
TTTGAAGTCCGTGCATCAGC+TGG 0.445938 8_1:+43111749 None:intergenic
TCAGCTCAGGAATGGCAGTA+TGG 0.448704 8_1:+43111315 None:intergenic
TTCTGTGCAAAGGGGCAGAC+AGG 0.449252 8_1:-43110900 Msa1195270:intron
TCTTCTCATGGATCTGAGGC+TGG 0.450465 8_1:+43112821 None:intergenic
TAATGACAGATATAAATATA+AGG 0.451798 8_1:+43112023 None:intergenic
CATCATACATTAGAATGTCT+TGG 0.452105 8_1:+43111786 None:intergenic
ATAGGAAAGCTCAGGTTTCA+TGG 0.453670 8_1:-43111520 Msa1195270:CDS
GGGAAGACCACTCTTGCAAT+AGG 0.453999 8_1:-43109297 Msa1195270:CDS
TAATAAAATGTCATCGACAT+TGG 0.460039 8_1:+43111361 None:intergenic
AAATGACAAAGGGAAGGATC+AGG 0.460343 8_1:-43112960 Msa1195270:CDS
AAGCATCAAAGAATTTAAAA+GGG 0.460597 8_1:+43107298 None:intergenic
AGCAAAGATCAGACAATTGA+AGG 0.460975 8_1:-43107435 Msa1195270:CDS
TATGGCAAACTGCTAGTATT+CGG 0.465959 8_1:+43111333 None:intergenic
CGATGTAGTAAAAGTAGAAA+AGG 0.466372 8_1:-43112470 Msa1195270:CDS
TCACTTGAAGACGCACCATA+TGG 0.467089 8_1:+43111623 None:intergenic
ATCTTCTGGGCCAGGTCGTA+AGG 0.467926 8_1:-43109338 Msa1195270:intron
CTTAAGATTTGGGTATTGAC+GGG 0.469051 8_1:-43110173 Msa1195270:CDS
AAAGTGTAAAGACTGGGGTT+CGG 0.469430 8_1:+43112262 None:intergenic
TACAGGCTTCTCCGGCCAAT+CGG 0.471012 8_1:-43108235 Msa1195270:CDS
GAGCGGCTTCTGGTGGTCCA+TGG 0.473490 8_1:-43108535 Msa1195270:CDS
TGCTACACAAATGATAAAGC+TGG 0.475442 8_1:-43109775 Msa1195270:CDS
CTTTATCATTTGTGTAGCAT+TGG 0.476261 8_1:+43109779 None:intergenic
TTGCTTCTGATCTCGAGGAC+GGG 0.477841 8_1:-43111574 Msa1195270:CDS
TGCCTACCATTTACTGATTG+AGG 0.478594 8_1:-43107687 Msa1195270:CDS
TATGGGGTAGCATAGTTACT+TGG 0.481779 8_1:-43107760 Msa1195270:CDS
TCTTAAGATTTGGGTATTGA+CGG 0.483998 8_1:-43110174 Msa1195270:CDS
GGGCGTATGTACCACCACTT+TGG 0.485046 8_1:+43111962 None:intergenic
GAGGGGCCTCATCCACTTCA+AGG 0.486289 8_1:-43112874 Msa1195270:CDS
TCGCGTGTCTCCCAAGCAAA+AGG 0.488004 8_1:-43109628 Msa1195270:CDS
CCAACAAAAGTGTAAAGACT+GGG 0.491337 8_1:+43112256 None:intergenic
TTGGCCGGAGAAGCCTGTAT+AGG 0.492237 8_1:+43108239 None:intergenic
CATTTGCATTAATTATTGAT+GGG 0.493682 8_1:-43109734 Msa1195270:CDS
GGTCCTTGTTGGTAAAGTGC+TGG 0.494222 8_1:+43108022 None:intergenic
AAAAGCTAAATCACTATCTA+GGG 0.495806 8_1:+43112318 None:intergenic
CAGGTCGTGGCAGAATATTA+TGG 0.495836 8_1:-43112497 Msa1195270:CDS
GTAGGCACTGTGAGAAAGGT+TGG 0.496976 8_1:+43107703 None:intergenic
AAGATCTTTGGAGTCTACCT+TGG 0.499544 8_1:-43112341 Msa1195270:CDS
GTTGGAATCAGCGGGGTTGA+AGG 0.500123 8_1:-43109228 Msa1195270:CDS
CAGAAAGCCAAAGCAGCCGT+TGG 0.500697 8_1:-43110439 Msa1195270:CDS
ATGTCAATTATGTACGTACT+GGG 0.501493 8_1:+43107372 None:intergenic
AAGCACATTGTATTTGGTTG+TGG 0.501615 8_1:+43112768 None:intergenic
AGGATCAATCCATGTGGGTG+AGG 0.502729 8_1:-43107511 Msa1195270:CDS
TCCAACAAAAGTGTAAAGAC+TGG 0.502935 8_1:+43112255 None:intergenic
TTGGATAATGTGGTGATCCA+TGG 0.503517 8_1:+43107562 None:intergenic
AATGGTAGGCACTGTGAGAA+AGG 0.504292 8_1:+43107699 None:intergenic
GCCAATCGGTTTATGATGAC+TGG 0.504919 8_1:-43108221 Msa1195270:CDS
TTTGAATGAAGAGTTGGGTC+AGG 0.505527 8_1:-43111726 Msa1195270:CDS
AGTATCCAATGATACCAAAC+AGG 0.507438 8_1:-43109926 Msa1195270:intron
TGGAAACTGCAATCAACATT+GGG 0.507756 8_1:-43110142 Msa1195270:intron
ATGGAAACTGCAATCAACAT+TGG 0.509063 8_1:-43110143 Msa1195270:CDS
AATAGAAAGGTCTCTTCTCA+TGG 0.509718 8_1:+43112809 None:intergenic
CAAGGAACTTGGGATCATAC+TGG 0.510405 8_1:+43111924 None:intergenic
CAAGACAAGAAACCAAGATT+GGG 0.511121 8_1:-43107475 Msa1195270:CDS
CTATCGTCAAGTTATGAAGA+TGG 0.512175 8_1:-43112418 Msa1195270:CDS
CGCCATACATCATGAGAAAG+AGG 0.513165 8_1:+43107735 None:intergenic
AACATCTTTGAAATGATATG+TGG 0.514371 8_1:+43107591 None:intergenic
TGCACGGTTCGCGAGTAGCC+CGG 0.516949 8_1:+43112850 None:intergenic
CAAGAAGCAGATATTGGTGT+TGG 0.517726 8_1:-43109246 Msa1195270:CDS
CCTCATCCACTTCAAGGTCC+GGG 0.518996 8_1:-43112868 Msa1195270:CDS
AGAAGAACAAATCGGGGACA+AGG 0.520709 8_1:-43113084 Msa1195270:five_prime_UTR
TGCTTCTGATCTCGAGGACG+GGG 0.521135 8_1:-43111573 Msa1195270:CDS
ATTGGTATAGAATATTAGGA+TGG 0.522089 8_1:-43107982 Msa1195270:CDS
TGTTCCTGAGCTTAGAATCT+CGG 0.522143 8_1:+43112179 None:intergenic
AGCCCCTTCATCTGGAGACT+CGG 0.522874 8_1:+43111262 None:intergenic
TTTGATCGTTTGTCCAAGAA+CGG 0.523040 8_1:-43110586 Msa1195270:CDS
AAACTTTGAGTATGAGCGCC+AGG 0.523169 8_1:-43112233 Msa1195270:CDS
GCACTACAAGAAAGATATTG+AGG 0.523512 8_1:-43107531 Msa1195270:CDS
GATGGAAACATAAAGTGAGA+TGG 0.525667 8_1:+43111844 None:intergenic
AATGATATGTGGATAAGATA+AGG 0.526325 8_1:+43107602 None:intergenic
CTAATGTATGATGAAGAAAC+CGG 0.527104 8_1:-43111776 Msa1195270:CDS
CAGTATGATCCCAAGTTCCT+TGG 0.527788 8_1:-43111923 Msa1195270:CDS
GAGCACAATAGAAAAGAAGA+TGG 0.529988 8_1:-43112074 Msa1195270:CDS
GAGGCCTATACAGGCTTCTC+CGG 0.531674 8_1:-43108243 Msa1195270:CDS
GAGACTGTTGTTACTTCCAA+AGG 0.532084 8_1:-43111464 Msa1195270:CDS
CTTCAGGGCAAGTGGTTGAA+AGG 0.532251 8_1:-43111157 Msa1195270:intron
AGCAAGTTTATCAATGCACT+CGG 0.532843 8_1:+43110205 None:intergenic
TCTTGTAACACCAGTGTCCA+TGG 0.533049 8_1:+43108518 None:intergenic
AAAAGAGTTGATTCTTGTTG+GGG 0.534028 8_1:-43110371 Msa1195270:CDS
CTGAGCTTTCCTATGACGTA+GGG 0.534434 8_1:+43111529 None:intergenic
TCCTCCGAGATTCTAAGCTC+AGG 0.534848 8_1:-43112183 Msa1195270:CDS
GTGAAAGAATATCTGCTTCA+GGG 0.535036 8_1:-43111172 Msa1195270:CDS
CTCCTCATTCAGCTCAGGAA+TGG 0.535507 8_1:+43111307 None:intergenic
TGATGGTCAGACATCTGACT+TGG 0.535907 8_1:-43107882 Msa1195270:CDS
ATTGATAAACTTGCTCAAGC+TGG 0.537669 8_1:-43110197 Msa1195270:CDS
TTCTGGTGGTCCATGGACAC+TGG 0.538702 8_1:-43108528 Msa1195270:CDS
TCCTGAGCTGAATGAGGAGA+CGG 0.539633 8_1:-43111303 Msa1195270:CDS
TCATTACCTGTCATTTCACT+TGG 0.540464 8_1:-43108168 Msa1195270:CDS
TCCTGTAGTTTGCTTCGACA+GGG 0.542114 8_1:-43109985 Msa1195270:CDS
CCAAGTTCCTTGGAATGGCT+GGG 0.543101 8_1:-43111913 Msa1195270:CDS
CAGCGGGGTTGAAGGTATGC+AGG 0.543612 8_1:-43109220 Msa1195270:intron
AGATGGTGAGACCAACTTGA+AGG 0.544295 8_1:-43112368 Msa1195270:CDS
GCCTCTGCTACTACTGAGGA+GGG 0.544903 8_1:-43112892 Msa1195270:CDS
CATTTACTGATTGAGGCTCT+CGG 0.545205 8_1:-43107680 Msa1195270:CDS
GGATCAGGGCAAGGCTCCGA+AGG 0.545591 8_1:-43112945 Msa1195270:CDS
CTGAGGCTGGTTGCAGTGCA+CGG 0.545895 8_1:+43112834 None:intergenic
ATATTGGTGTTGGAATCAGC+GGG 0.546041 8_1:-43109236 Msa1195270:CDS
GTCTCCCAAGCAAAAGGCAC+TGG 0.546714 8_1:-43109622 Msa1195270:intron
AATTTCCTTTCAGGCAGTGA+TGG 0.547063 8_1:-43108593 Msa1195270:intron
GTCATCATAAACCGATTGGC+CGG 0.548004 8_1:+43108224 None:intergenic
AACTTTAACATGTAATCAGA+TGG 0.548950 8_1:-43111675 Msa1195270:CDS
GTTAATCACCATAAAGGTGA+TGG 0.549662 8_1:-43112532 Msa1195270:CDS
AATGTTCACTTGCATAATCT+GGG 0.550029 8_1:-43107843 Msa1195270:CDS
GAAGCCGAGTCTCCAGATGA+AGG 0.550316 8_1:-43111266 Msa1195270:CDS
CCCGGACCTTGAAGTGGATG+AGG 0.550839 8_1:+43112868 None:intergenic
GATAGGAGAAGCAAATCAGC+TGG 0.550915 8_1:+43112436 None:intergenic
AGCCTCTGCTACTACTGAGG+AGG 0.550941 8_1:-43112893 Msa1195270:CDS
GAATGAAGAGTTGGGTCAGG+TGG 0.551050 8_1:-43111723 Msa1195270:CDS
CCCCTCCTCAGTAGTAGCAG+AGG 0.551400 8_1:+43112891 None:intergenic
GCTTGATTTCTTGGATAATG+TGG 0.553964 8_1:+43107552 None:intergenic
GTATAGAATATTAGGATGGA+TGG 0.554248 8_1:-43107978 Msa1195270:CDS
TATCGTCAAGTTATGAAGAT+GGG 0.554442 8_1:-43112417 Msa1195270:CDS
CTCTACTTTGAGCTGAATTG+CGG 0.554519 8_1:-43112985 Msa1195270:five_prime_UTR
TGGATAATGTGGTGATCCAT+GGG 0.554640 8_1:+43107563 None:intergenic
TAGGCACTGTGAGAAAGGTT+GGG 0.556686 8_1:+43107704 None:intergenic
GTGGAGACGATGAATTTAGA+TGG 0.556728 8_1:-43112385 Msa1195270:CDS
TAAATCACTATCTAGGGCCA+AGG 0.559149 8_1:+43112324 None:intergenic
ATGGAAACATAAAGTGAGAT+GGG 0.562480 8_1:+43111845 None:intergenic
CATCTTCATAACTTGACGAT+AGG 0.563335 8_1:+43112419 None:intergenic
TCCCTGTCGAAGCAAACTAC+AGG 0.564032 8_1:+43109984 None:intergenic
TGTTTCCATCGAGGTTGTGA+AGG 0.566251 8_1:-43111831 Msa1195270:CDS
TCATTCTTGCAATAATAGAA+AGG 0.566303 8_1:+43112796 None:intergenic
TAGTATGGCGAAGGAAGCAT+TGG 0.566804 8_1:-43112602 Msa1195270:CDS
TAGGAAAGCTCAGGTTTCAT+GGG 0.567465 8_1:-43111519 Msa1195270:CDS
AGCCCGACAACAAATGCTAA+AGG 0.568477 8_1:+43112625 None:intergenic
ATAGAAGACAAACTGCAGAA+AGG 0.570675 8_1:-43110340 Msa1195270:CDS
TGCCATTCCTGAGCTGAATG+AGG 0.570822 8_1:-43111309 Msa1195270:CDS
ATTGCTTCTGATCTCGAGGA+CGG 0.571196 8_1:-43111575 Msa1195270:CDS
ACCAGTCATCATAAACCGAT+TGG 0.573019 8_1:+43108220 None:intergenic
TGATCCCAAGTTCCTTGGAA+TGG 0.574567 8_1:-43111918 Msa1195270:CDS
CCTACGTCATAGGAAAGCTC+AGG 0.574634 8_1:-43111528 Msa1195270:CDS
GATTGGGTTCACTGCAAGAG+TGG 0.574931 8_1:-43107459 Msa1195270:CDS
GACTCATCCCAGCCATTCCA+AGG 0.575304 8_1:+43111906 None:intergenic
CCTGAGCTTTCCTATGACGT+AGG 0.575668 8_1:+43111528 None:intergenic
ATAGGCCTCAAAGTAAAAGA+TGG 0.576374 8_1:+43108257 None:intergenic
AAGCCGAGTCTCCAGATGAA+GGG 0.578655 8_1:-43111265 Msa1195270:CDS
TAGAGAGGCAATGCTTGAGC+GGG 0.579723 8_1:-43110410 Msa1195270:CDS
GAACGGAAAAGCGTATTTGG+AGG 0.581545 8_1:-43110569 Msa1195270:CDS
CCAGCCATTCCAAGGAACTT+GGG 0.582184 8_1:+43111914 None:intergenic
AGTCATGACCATAAATGCTA+TGG 0.582586 8_1:+43111997 None:intergenic
ACCAATTACAATTCATGAGA+CGG 0.584114 8_1:+43111393 None:intergenic
GAGGGACAATGTTGAAGTTG+AGG 0.584299 8_1:+43113832 None:intergenic
ACCACTCTTGCAATAGGTGA+TGG 0.584872 8_1:-43109291 Msa1195270:CDS
AGGTGATGAGGATCAAAAGC+AGG 0.584982 8_1:-43111444 Msa1195270:CDS
GCAAAGATCAGACAATTGAA+GGG 0.587363 8_1:-43107434 Msa1195270:CDS
ACAAATGATAAAGCTGGAGA+AGG 0.588374 8_1:-43109769 Msa1195270:CDS
GAAGAACAAATCGGGGACAA+GGG 0.588681 8_1:-43113083 Msa1195270:five_prime_UTR
ACGTGTGAAAATACTTGACT+GGG 0.589578 8_1:+43111193 None:intergenic
CCTGAGCTGAATGAGGAGAC+GGG 0.590662 8_1:-43111302 Msa1195270:CDS
AGAATTTGACTAGGATCAAG+AGG 0.591174 8_1:+43112205 None:intergenic
GGATCAATCCATGTGGGTGA+GGG 0.591254 8_1:-43107510 Msa1195270:CDS
AGCCGTTGGGGCTGATAGAG+AGG 0.592757 8_1:-43110425 Msa1195270:CDS
TAAAACCTTCACAACCTCGA+TGG 0.595824 8_1:+43111826 None:intergenic
GATATTGGTGTTGGAATCAG+CGG 0.595930 8_1:-43109237 Msa1195270:CDS
AATATCTGCTTCAGGGCAAG+TGG 0.596940 8_1:-43111165 Msa1195270:CDS
GGTCTCTTCTCATGGATCTG+AGG 0.597807 8_1:+43112817 None:intergenic
GTCGTAAGGCTGGTAAAACA+AGG 0.598374 8_1:-43109324 Msa1195270:CDS
TGTCGGGCTTAGTATGGCGA+AGG 0.598635 8_1:-43112611 Msa1195270:CDS
TTACAAGAGAATTGCACAGA+TGG 0.599151 8_1:-43108503 Msa1195270:intron
AGTGATTGTCCGTGATGAGG+AGG 0.599265 8_1:-43110935 Msa1195270:CDS
GCAGATTGCTTCTGATCTCG+AGG 0.600199 8_1:-43111579 Msa1195270:CDS
TCGAGCCTCTGCTACTACTG+AGG 0.600428 8_1:-43112896 Msa1195270:CDS
TGTTACTTCCAAAGGTGATG+AGG 0.600792 8_1:-43111456 Msa1195270:CDS
ACCATCACCTATTGCAAGAG+TGG 0.601073 8_1:+43109290 None:intergenic
TAGGATCAAGAGGATAAACC+TGG 0.601247 8_1:+43112215 None:intergenic
CCGGAACTCCAGCTGATGCA+CGG 0.601738 8_1:-43111757 Msa1195270:CDS
AATGACAAAGGGAAGGATCA+GGG 0.601847 8_1:-43112959 Msa1195270:CDS
GACGGAGGAATATAGACCAT+TGG 0.601853 8_1:+43107955 None:intergenic
GTTGCCCAATAAATAGGCGC+AGG 0.601970 8_1:+43107656 None:intergenic
AGGAAAACGAACCAAACGGG+AGG 0.605510 8_1:+43113813 None:intergenic
CTCACTTTATGTTTCCATCG+AGG 0.605662 8_1:-43111840 Msa1195270:CDS
AATTGCGGCTAAATGACAAA+GGG 0.606106 8_1:-43112970 Msa1195270:exon
ATAGAGAGGCAATGCTTGAG+CGG 0.606318 8_1:-43110411 Msa1195270:CDS
AATGCACTAAAAGGTGACAT+TGG 0.608660 8_1:+43112661 None:intergenic
ATTAATGCAAATGCTGCATG+AGG 0.611094 8_1:+43109744 None:intergenic
GGTGATGGTGCAAATGATGT+TGG 0.612028 8_1:-43109276 Msa1195270:CDS
GGAAAACGAACCAAACGGGA+GGG 0.612048 8_1:+43113814 None:intergenic
ATTTGAACAAGATGTTTCGT+CGG 0.614176 8_1:-43108142 Msa1195270:CDS
GGCTGGTAAAACAAGGAACT+GGG 0.614753 8_1:-43109317 Msa1195270:CDS
GAATTGCGGCTAAATGACAA+AGG 0.615270 8_1:-43112971 Msa1195270:exon
AGCCGAGTCTCCAGATGAAG+GGG 0.617954 8_1:-43111264 Msa1195270:CDS
CAAAGGGAAGGATCAGGGCA+AGG 0.619417 8_1:-43112954 Msa1195270:CDS
GTAAAAGATGGTGAGGCCAA+AGG 0.621532 8_1:+43108269 None:intergenic
AAGAACAAATCGGGGACAAG+GGG 0.623740 8_1:-43113082 Msa1195270:five_prime_UTR
ATTCAACATCTGTTTATATG+GGG 0.624460 8_1:-43107776 Msa1195270:CDS
AGAACTCTCCCTCACCCACA+TGG 0.625362 8_1:+43107502 None:intergenic
AGCATCAAAGAATTTAAAAG+GGG 0.628344 8_1:+43107299 None:intergenic
GTGATTGTCCGTGATGAGGA+GGG 0.629461 8_1:-43110934 Msa1195270:CDS
ATATTAGGATGGATGGCCAA+TGG 0.630210 8_1:-43107971 Msa1195270:CDS
AATACACCAAGTGAAATGAC+AGG 0.632844 8_1:+43108162 None:intergenic
TCGTGGCAGAATATTATGGT+TGG 0.633275 8_1:-43112493 Msa1195270:CDS
AAATTTGGCCCTCCTCATCA+CGG 0.634882 8_1:+43110926 None:intergenic
TTTCCAGCACTTTACCAACA+AGG 0.635329 8_1:-43108025 Msa1195270:CDS
GTCAGTGATTGTCCGTGATG+AGG 0.635709 8_1:-43110938 Msa1195270:CDS
TGCCTCTCTATCAGCCCCAA+CGG 0.635779 8_1:+43110423 None:intergenic
CCTCAAAGTAAAAGATGGTG+AGG 0.636301 8_1:+43108262 None:intergenic
AGAAGACAAACTGCAGAAAG+GGG 0.641559 8_1:-43110338 Msa1195270:intron
TCTCGGAGGAGAATTTGACT+AGG 0.641722 8_1:+43112196 None:intergenic
GCGTATGTACCACCACTTTG+GGG 0.642630 8_1:+43111964 None:intergenic
GAGTAGCCCGGACCTTGAAG+TGG 0.646140 8_1:+43112862 None:intergenic
GCGGCTAAATGACAAAGGGA+AGG 0.646732 8_1:-43112966 Msa1195270:exon
AGCCTCAATCAGTAAATGGT+AGG 0.648064 8_1:+43107685 None:intergenic
GAAAGCCAAAGCAGCCGTTG+GGG 0.651410 8_1:-43110437 Msa1195270:CDS
TGAAGATGGGATATGCTATG+TGG 0.653812 8_1:-43112404 Msa1195270:CDS
CCTCTGCTACTACTGAGGAG+GGG 0.655488 8_1:-43112891 Msa1195270:CDS
ATAAGGAAGAATGCATGCAA+CGG 0.656513 8_1:+43107619 None:intergenic
CAACAAAAGTGTAAAGACTG+GGG 0.667352 8_1:+43112257 None:intergenic
TATTGAGGATCAATCCATGT+GGG 0.670199 8_1:-43107516 Msa1195270:CDS
TAAGATTTGGGTATTGACGG+GGG 0.671730 8_1:-43110171 Msa1195270:CDS
ACTGGCGGTCAATTTCGTCA+GGG 0.672943 8_1:+43111942 None:intergenic
GCAAGTTTATCAATGCACTC+GGG 0.674177 8_1:+43110206 None:intergenic
CACCGAATACATATATGGAG+TGG 0.678803 8_1:-43112158 Msa1195270:CDS
GAGCTTTCCTATGACGTAGG+GGG 0.684251 8_1:+43111531 None:intergenic
TGTCAATTATGTACGTACTG+GGG 0.689292 8_1:+43107373 None:intergenic
AGTACAGAACCCCAAAGTGG+TGG 0.689918 8_1:-43111973 Msa1195270:CDS
TGAGCTTTCCTATGACGTAG+GGG 0.693264 8_1:+43111530 None:intergenic
TTAAGATTTGGGTATTGACG+GGG 0.696030 8_1:-43110172 Msa1195270:CDS
AAGCATTGGAAGATTCACGC+AGG 0.697605 8_1:-43112588 Msa1195270:CDS
GATTATGCAAGTGAACATTG+TGG 0.698393 8_1:+43107847 None:intergenic
CAGATGTCTGACCATCAACA+CGG 0.701518 8_1:+43107888 None:intergenic
CTAAGTACAGAACCCCAAAG+TGG 0.707821 8_1:-43111976 Msa1195270:CDS
TCCTGAGCTTAGAATCTCGG+AGG 0.711328 8_1:+43112182 None:intergenic
GCCGAAGAAGATGACGACGG+AGG 0.711602 8_1:+43107940 None:intergenic
GGAACTTGGGATCATACTGG+CGG 0.715093 8_1:+43111927 None:intergenic
GAGCTGAATGAGGAGACGGG+TGG 0.715902 8_1:-43111299 Msa1195270:CDS
ATTGTGTTATAATGAAAACG+GGG 0.722637 8_1:-43107273 Msa1195270:three_prime_UTR
TTGATCGTAGAATATGGCGA+CGG 0.728555 8_1:+43107916 None:intergenic
ATATCCATAGAGAATGAGAG+CGG 0.734279 8_1:+43111874 None:intergenic
ATATTGAGGATCAATCCATG+TGG 0.737535 8_1:-43107517 Msa1195270:CDS
TATTGGTGTTGGAATCAGCG+GGG 0.747245 8_1:-43109235 Msa1195270:CDS
GGTGCCGAAGAAGATGACGA+CGG 0.764144 8_1:+43107937 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTATTTTTTTATTTTATTTT+TGG - chr8_1:43107626-43107645 Msa1195270:CDS 0.0%
!!! TTTTTTTTTTGTTTTCAATT+TGG - chr8_1:43107368-43107387 Msa1195270:exon 10.0%
!!! AATAAAATTTTAGTCTTATA+TGG - chr8_1:43112074-43112093 Msa1195270:CDS 10.0%
!!! TGGAATTTTAAAAAAATTCA+AGG - chr8_1:43107456-43107475 Msa1195270:CDS 15.0%
!!! GGAATTTTAAAAAAATTCAA+GGG - chr8_1:43107457-43107476 Msa1195270:CDS 15.0%
!! TGAATACTGAATAAAAAAAA+AGG + chr8_1:43107736-43107755 None:intergenic 15.0%
!!! TTTTTTTTATTCAGTATTCA+AGG - chr8_1:43107736-43107755 Msa1195270:CDS 15.0%
!! GTTTAAATTATATGAAAAGT+TGG - chr8_1:43107777-43107796 Msa1195270:CDS 15.0%
!! TAATGACAGATATAAATATA+AGG + chr8_1:43109126-43109145 None:intergenic 15.0%
!!! ATTTATGTTCTAAACATATA+AGG - chr8_1:43111066-43111085 Msa1195270:intron 15.0%
!!! TATTTAGAAAATTAGCATTT+TGG - chr8_1:43112357-43112376 Msa1195270:CDS 15.0%
!!! ACATTTTTGAGTATTTTTTT+AGG - chr8_1:43113793-43113812 Msa1195270:intron 15.0%
!! ATATTGTGTTATAATGAAAA+CGG - chr8_1:43113871-43113890 Msa1195270:five_prime_UTR 15.0%
!! AAAAAAAACAGAAAGAAGAA+AGG + chr8_1:43107356-43107375 None:intergenic 20.0%
!!! TTTTTTTTCACAATTTTAGC+TGG - chr8_1:43107407-43107426 Msa1195270:CDS 20.0%
!!! TTATTCTTGTTTTATGTTGA+AGG - chr8_1:43107603-43107622 Msa1195270:CDS 20.0%
!!! TTTTTGGAATTTTATGATGT+TGG - chr8_1:43107642-43107661 Msa1195270:CDS 20.0%
!!! TTTTGGAATTTTATGATGTT+GGG - chr8_1:43107643-43107662 Msa1195270:CDS 20.0%
!!! GAAATTTGAAATTTGAATGT+TGG - chr8_1:43107687-43107706 Msa1195270:CDS 20.0%
!! TACTGAATAAAAAAAAAGGA+GGG + chr8_1:43107732-43107751 None:intergenic 20.0%
!! ATACTGAATAAAAAAAAAGG+AGG + chr8_1:43107733-43107752 None:intergenic 20.0%
!!! TGCTAATATATACTTTCTTT+TGG - chr8_1:43108442-43108461 Msa1195270:intron 20.0%
!! TTCTAATGTATTATTTGAGA+AGG + chr8_1:43110351-43110370 None:intergenic 20.0%
!!! AAATGAAATTGTATTTTCTG+TGG - chr8_1:43111129-43111148 Msa1195270:intron 20.0%
!! ATTTAATATGTTGTCCTTAA+TGG + chr8_1:43111340-43111359 None:intergenic 20.0%
!! CATTTGCATTAATTATTGAT+GGG - chr8_1:43111412-43111431 Msa1195270:CDS 20.0%
!!! TAAGTTTTCCTATTTAACTA+CGG + chr8_1:43111660-43111679 None:intergenic 20.0%
!!! ACATACAAGTTGATTTTAAA+TGG + chr8_1:43111686-43111705 None:intergenic 20.0%
!! TATCTGAAAAATAACATGTA+TGG + chr8_1:43112051-43112070 None:intergenic 20.0%
!!! ATATTATTGATAATGCAAAG+AGG + chr8_1:43112279-43112298 None:intergenic 20.0%
!! TGATTTATTCTATAAAACGA+GGG - chr8_1:43112305-43112324 Msa1195270:CDS 20.0%
!! TTTGATTGGTATAGAATATT+AGG - chr8_1:43113160-43113179 Msa1195270:intron 20.0%
!! AAGCATCAAAGAATTTAAAA+GGG + chr8_1:43113851-43113870 None:intergenic 20.0%
!! TAAGCATCAAAGAATTTAAA+AGG + chr8_1:43113852-43113871 None:intergenic 20.0%
!! TATTGTGTTATAATGAAAAC+GGG - chr8_1:43113872-43113891 Msa1195270:five_prime_UTR 20.0%
!!! TAGCTTACATTTTTTTTTTG+TGG + chr8_1:43113918-43113937 None:intergenic 20.0%
! TTGAATTTGAATGCAGTATT+TGG - chr8_1:43107512-43107531 Msa1195270:CDS 25.0%
!!! TTTGGAATTTTATGATGTTG+GGG - chr8_1:43107644-43107663 Msa1195270:CDS 25.0%
!!! ATTTGAATGTTGGTTTGAAT+AGG - chr8_1:43107697-43107716 Msa1195270:CDS 25.0%
!!! TTTGAATGTTGGTTTGAATA+GGG - chr8_1:43107698-43107717 Msa1195270:CDS 25.0%
! ACTGAATAAAAAAAAAGGAG+GGG + chr8_1:43107731-43107750 None:intergenic 25.0%
! AAGGATGAATTGAATTTACT+GGG - chr8_1:43107755-43107774 Msa1195270:CDS 25.0%
!!! TAGGTTTTAGAAGAACAAAT+CGG - chr8_1:43108054-43108073 Msa1195270:intron 25.0%
! TCATTCTTGCAATAATAGAA+AGG + chr8_1:43108353-43108372 None:intergenic 25.0%
! AAATGTAAGCACATTGTATT+TGG + chr8_1:43108387-43108406 None:intergenic 25.0%
! AACTGTTCAAAAATTGCTTT+GGG + chr8_1:43108413-43108432 None:intergenic 25.0%
! AAACTGTTCAAAAATTGCTT+TGG + chr8_1:43108414-43108433 None:intergenic 25.0%
!! AATTTTTGAACAGTTTCGTA+GGG - chr8_1:43108418-43108437 Msa1195270:intron 25.0%
! AAAAGCTAAATCACTATCTA+GGG + chr8_1:43108831-43108850 None:intergenic 25.0%
! TAAAAGCTAAATCACTATCT+AGG + chr8_1:43108832-43108851 None:intergenic 25.0%
!!! AGATAGTGATTTAGCTTTTA+AGG - chr8_1:43108832-43108851 Msa1195270:intron 25.0%
! TTCAAATTTGAATGAAGAGT+TGG - chr8_1:43109414-43109433 Msa1195270:intron 25.0%
! TCAAATTTGAATGAAGAGTT+GGG - chr8_1:43109415-43109434 Msa1195270:intron 25.0%
! AACTTTAACATGTAATCAGA+TGG - chr8_1:43109471-43109490 Msa1195270:intron 25.0%
! AATAAAATGTCATCGACATT+GGG + chr8_1:43109787-43109806 None:intergenic 25.0%
! TAATAAAATGTCATCGACAT+TGG + chr8_1:43109788-43109807 None:intergenic 25.0%
!! AAATTTTTCTTCTGTGCAAA+GGG - chr8_1:43110237-43110256 Msa1195270:intron 25.0%
! ACCAAGCATTTAAATGATTA+TGG - chr8_1:43110605-43110624 Msa1195270:intron 25.0%
! TCCATAATCATTTAAATGCT+TGG + chr8_1:43110609-43110628 None:intergenic 25.0%
! TTAAATGATTATGGAGAAAC+AGG - chr8_1:43110614-43110633 Msa1195270:intron 25.0%
!! AAAAAGAGTTGATTCTTGTT+GGG - chr8_1:43110774-43110793 Msa1195270:intron 25.0%
! CATAAATGAAATAGTATACG+AGG + chr8_1:43111053-43111072 None:intergenic 25.0%
! CATTTCAACATACTTTGTTA+CGG + chr8_1:43111114-43111133 None:intergenic 25.0%
! GCATTTGCATTAATTATTGA+TGG - chr8_1:43111411-43111430 Msa1195270:CDS 25.0%
! GTATAAGAGTAGTTGATTAT+TGG - chr8_1:43111599-43111618 Msa1195270:CDS 25.0%
! GTAGTTAAATAGGAAAACTT+AGG - chr8_1:43111659-43111678 Msa1195270:CDS 25.0%
! ATATGCAATCTATATAAGTG+TGG + chr8_1:43111718-43111737 None:intergenic 25.0%
! ATTCCAACTTGCAAAATTAA+AGG + chr8_1:43112027-43112046 None:intergenic 25.0%
!!! CATGTATCTTTTTTCATGTT+TGG - chr8_1:43112145-43112164 Msa1195270:CDS 25.0%
! CTGATTTATTCTATAAAACG+AGG - chr8_1:43112304-43112323 Msa1195270:CDS 25.0%
! ACAACTTAAAAGGACAATTA+AGG + chr8_1:43112519-43112538 None:intergenic 25.0%
!!! TTAATTGTCCTTTTAAGTTG+TGG - chr8_1:43112518-43112537 Msa1195270:CDS 25.0%
! AAAGAAATAACAAATCTGCA+AGG + chr8_1:43112844-43112863 None:intergenic 25.0%
!! TTTTACAAGAATATAGCCTT+TGG - chr8_1:43112861-43112880 Msa1195270:CDS 25.0%
! AAACACGACAACTTATTAAT+AGG + chr8_1:43113096-43113115 None:intergenic 25.0%
!! CAATCAAAGAACAGATTTTT+GGG + chr8_1:43113148-43113167 None:intergenic 25.0%
! ATTGGTATAGAATATTAGGA+TGG - chr8_1:43113164-43113183 Msa1195270:intron 25.0%
! GATTCAACATCTGTTTATAT+GGG - chr8_1:43113369-43113388 Msa1195270:intron 25.0%
! ATTCAACATCTGTTTATATG+GGG - chr8_1:43113370-43113389 Msa1195270:intron 25.0%
! AATGATATGTGGATAAGATA+AGG + chr8_1:43113547-43113566 None:intergenic 25.0%
!!! AACATCTTTGAAATGATATG+TGG + chr8_1:43113558-43113577 None:intergenic 25.0%
! AGCATCAAAGAATTTAAAAG+GGG + chr8_1:43113850-43113869 None:intergenic 25.0%
! ATTGTGTTATAATGAAAACG+GGG - chr8_1:43113873-43113892 Msa1195270:five_prime_UTR 25.0%
!!! ACATTTTTTTTTTGTGGTGA+AGG + chr8_1:43113912-43113931 None:intergenic 25.0%
!! TTGAATGTTGGTTTGAATAG+GGG - chr8_1:43107699-43107718 Msa1195270:CDS 30.0%
CAAGGATGAATTGAATTTAC+TGG - chr8_1:43107754-43107773 Msa1195270:CDS 30.0%
GTATCATGCATCAAATCTTA+TGG - chr8_1:43107817-43107836 Msa1195270:CDS 30.0%
ATATGATGTTGTCACTAACA+CGG + chr8_1:43107965-43107984 None:intergenic 30.0%
GTTAGTGACAACATCATATT+TGG - chr8_1:43107966-43107985 Msa1195270:CDS 30.0%
!! GTTAATTTGCATGTGTTGTT+AGG - chr8_1:43108035-43108054 Msa1195270:intron 30.0%
!!! AGGTTTTAGAAGAACAAATC+GGG - chr8_1:43108055-43108074 Msa1195270:intron 30.0%
!!! CTGTTTTTTGGGTTTTGTTT+TGG - chr8_1:43108114-43108133 Msa1195270:intron 30.0%
!!! TTTTTTGGGTTTTGTTTTGG+TGG - chr8_1:43108117-43108136 Msa1195270:intron 30.0%
!!! TTTTTGGGTTTTGTTTTGGT+GGG - chr8_1:43108118-43108137 Msa1195270:intron 30.0%
ATGTGTAAAAATTGCTCCTT+CGG + chr8_1:43108220-43108239 None:intergenic 30.0%
! AGGAGCAATTTTTACACATT+TGG - chr8_1:43108221-43108240 Msa1195270:CDS 30.0%
! CAATTTTTGAACAGTTTCGT+AGG - chr8_1:43108417-43108436 Msa1195270:intron 30.0%
ATCATACTCAATGCACTAAA+AGG + chr8_1:43108497-43108516 None:intergenic 30.0%
CGAAAAGTTAATCACCATAA+AGG - chr8_1:43108608-43108627 Msa1195270:intron 30.0%
CGATGTAGTAAAAGTAGAAA+AGG - chr8_1:43108676-43108695 Msa1195270:intron 30.0%
TATCGTCAAGTTATGAAGAT+GGG - chr8_1:43108729-43108748 Msa1195270:intron 30.0%
! AGATCTTTTAACCTTCAAGT+TGG + chr8_1:43108792-43108811 None:intergenic 30.0%
CTTGAAGGTTAAAAGATCTT+TGG - chr8_1:43108793-43108812 Msa1195270:intron 30.0%
!! TTAGCTTTTAAGGATTTCAC+TGG - chr8_1:43108842-43108861 Msa1195270:intron 30.0%
CATTAGTACCATAGCATTTA+TGG - chr8_1:43109141-43109160 Msa1195270:intron 30.0%
ATGGAAACATAAAGTGAGAT+GGG + chr8_1:43109304-43109323 None:intergenic 30.0%
TAGAATGTCTTGGTTAATGA+AGG + chr8_1:43109353-43109372 None:intergenic 30.0%
CATCATACATTAGAATGTCT+TGG + chr8_1:43109363-43109382 None:intergenic 30.0%
CTAATGTATGATGAAGAAAC+CGG - chr8_1:43109370-43109389 Msa1195270:intron 30.0%
TTCAAAACCAAATCCCTTTA+TGG + chr8_1:43109728-43109747 None:intergenic 30.0%
ACCAATTACAATTCATGAGA+CGG + chr8_1:43109756-43109775 None:intergenic 30.0%
CTTTGCACAGAAGAAAAATT+TGG + chr8_1:43110238-43110257 None:intergenic 30.0%
! CAAATTTTTCTTCTGTGCAA+AGG - chr8_1:43110236-43110255 Msa1195270:intron 30.0%
! AATTTTTCTTCTGTGCAAAG+GGG - chr8_1:43110238-43110257 Msa1195270:intron 30.0%
AATTCTATTGTTCTTGCCTA+TGG - chr8_1:43110279-43110298 Msa1195270:intron 30.0%
CAGTAAAAAATGAGTACCAT+AGG + chr8_1:43110298-43110317 None:intergenic 30.0%
GTATAATGTCGATCATCAAT+AGG - chr8_1:43110324-43110343 Msa1195270:intron 30.0%
! GTTTTTGCAAGATTCTTCTA+TGG + chr8_1:43110450-43110469 None:intergenic 30.0%
! TTTTTCTTCAAGCCTTCTAT+AGG + chr8_1:43110660-43110679 None:intergenic 30.0%
!! AAGAAAAAGAGTACTCAGAT+TGG - chr8_1:43110672-43110691 Msa1195270:intron 30.0%
! GAAAAAGAGTTGATTCTTGT+TGG - chr8_1:43110773-43110792 Msa1195270:intron 30.0%
! AAAAGAGTTGATTCTTGTTG+GGG - chr8_1:43110775-43110794 Msa1195270:intron 30.0%
TTTGGTTGAAGATTTGATGT+AGG + chr8_1:43110895-43110914 None:intergenic 30.0%
!! GGAGAATAAAGCATTGAATT+TGG + chr8_1:43110913-43110932 None:intergenic 30.0%
!! TCTTAAGATTTGGGTATTGA+CGG - chr8_1:43110972-43110991 Msa1195270:CDS 30.0%
!! AATGAAAAAGAGTACCTGTT+TGG + chr8_1:43111237-43111256 None:intergenic 30.0%
CTTTATCATTTGTGTAGCAT+TGG + chr8_1:43111370-43111389 None:intergenic 30.0%
CACAAAATCACAACAGAAAA+CGG + chr8_1:43111565-43111584 None:intergenic 30.0%
TCCTGATTTCTTAATCTTCT+GGG - chr8_1:43111795-43111814 Msa1195270:CDS 30.0%
ATGATACAAGAAGCAGATAT+TGG - chr8_1:43111894-43111913 Msa1195270:CDS 30.0%
!! TAGCCTTTAATTTTGCAAGT+TGG - chr8_1:43112021-43112040 Msa1195270:CDS 30.0%
! AGGTTTTCTTTCTCTAATCA+CGG + chr8_1:43112123-43112142 None:intergenic 30.0%
CATGAAAAAAGATACATGAC+AGG + chr8_1:43112143-43112162 None:intergenic 30.0%
! TGCTAAATTTTATTGCAGTG+TGG - chr8_1:43112448-43112467 Msa1195270:CDS 30.0%
! TTTTATTGCAGTGTGGAAAA+TGG - chr8_1:43112455-43112474 Msa1195270:CDS 30.0%
AGAAGATATCAGTTAAGAAG+AGG + chr8_1:43112820-43112839 None:intergenic 30.0%
ATTTGAACAAGATGTTTCGT+CGG - chr8_1:43113004-43113023 Msa1195270:five_prime_UTR 30.0%
!! AATAGGTTGGATTTTTCACA+CGG + chr8_1:43113079-43113098 None:intergenic 30.0%
ACGACAACTTATTAATAGGT+TGG + chr8_1:43113092-43113111 None:intergenic 30.0%
! CCAATCAAAGAACAGATTTT+TGG + chr8_1:43113149-43113168 None:intergenic 30.0%
CCAAAAATCTGTTCTTTGAT+TGG - chr8_1:43113146-43113165 Msa1195270:intron 30.0%
GTATAGAATATTAGGATGGA+TGG - chr8_1:43113168-43113187 Msa1195270:intron 30.0%
AATGTTCACTTGCATAATCT+GGG - chr8_1:43113303-43113322 Msa1195270:intron 30.0%
GATGTTGAATCCATGTAAAA+TGG + chr8_1:43113360-43113379 None:intergenic 30.0%
GGATTCAACATCTGTTTATA+TGG - chr8_1:43113368-43113387 Msa1195270:intron 30.0%
AATGTTGTTGCCCAATAAAT+AGG + chr8_1:43113499-43113518 None:intergenic 30.0%
ATGTCAATTATGTACGTACT+GGG + chr8_1:43113777-43113796 None:intergenic 30.0%
AATGTCAATTATGTACGTAC+TGG + chr8_1:43113778-43113797 None:intergenic 30.0%
!!! GAGTATTTTTTTAGGCTATG+CGG - chr8_1:43113801-43113820 Msa1195270:intron 30.0%
!!! AGTATTTTTTTAGGCTATGC+GGG - chr8_1:43113802-43113821 Msa1195270:intron 30.0%
AGAAAGGAAAACGAACCAAA+CGG + chr8_1:43107340-43107359 None:intergenic 35.0%
!! TTATGATGTTGGGGTGTTTT+AGG - chr8_1:43107653-43107672 Msa1195270:CDS 35.0%
TCATGCATCAAATCTTATGG+CGG - chr8_1:43107820-43107839 Msa1195270:CDS 35.0%
TATGATGTTGTCACTAACAC+GGG + chr8_1:43107964-43107983 None:intergenic 35.0%
! ATGAAGCACTAACACATACA+TGG + chr8_1:43107995-43108014 None:intergenic 35.0%
TGTATGTGTTAGTGCTTCAT+AGG - chr8_1:43107995-43108014 Msa1195270:CDS 35.0%
!!! GGTTTTAGAAGAACAAATCG+GGG - chr8_1:43108056-43108075 Msa1195270:intron 35.0%
AAAACCCAAAAAACAGCTAG+TGG + chr8_1:43108110-43108129 None:intergenic 35.0%
AATTGCGGCTAAATGACAAA+GGG - chr8_1:43108176-43108195 Msa1195270:CDS 35.0%
AATAGAAAGGTCTCTTCTCA+TGG + chr8_1:43108340-43108359 None:intergenic 35.0%
AAGCACATTGTATTTGGTTG+TGG + chr8_1:43108381-43108400 None:intergenic 35.0%
AATGCACTAAAAGGTGACAT+TGG + chr8_1:43108488-43108507 None:intergenic 35.0%
GTTAATCACCATAAAGGTGA+TGG - chr8_1:43108614-43108633 Msa1195270:intron 35.0%
CAAAAACACCATCACCTTTA+TGG + chr8_1:43108625-43108644 None:intergenic 35.0%
!! CATAAAGGTGATGGTGTTTT+TGG - chr8_1:43108623-43108642 Msa1195270:intron 35.0%
CATCTTCATAACTTGACGAT+AGG + chr8_1:43108730-43108749 None:intergenic 35.0%
CTATCGTCAAGTTATGAAGA+TGG - chr8_1:43108728-43108747 Msa1195270:intron 35.0%
! CAACAAAAGTGTAAAGACTG+GGG + chr8_1:43108892-43108911 None:intergenic 35.0%
! CCAACAAAAGTGTAAAGACT+GGG + chr8_1:43108893-43108912 None:intergenic 35.0%
! TCCAACAAAAGTGTAAAGAC+TGG + chr8_1:43108894-43108913 None:intergenic 35.0%
AGAATTTGACTAGGATCAAG+AGG + chr8_1:43108944-43108963 None:intergenic 35.0%
AGGAACACCGAATACATATA+TGG - chr8_1:43108983-43109002 Msa1195270:intron 35.0%
GACCACTCCATATATGTATT+CGG + chr8_1:43108993-43109012 None:intergenic 35.0%
!! TATTGTGCTCCTTTTTGAAG+GGG + chr8_1:43109062-43109081 None:intergenic 35.0%
! CTATTGTGCTCCTTTTTGAA+GGG + chr8_1:43109063-43109082 None:intergenic 35.0%
! TCTATTGTGCTCCTTTTTGA+AGG + chr8_1:43109064-43109083 None:intergenic 35.0%
GAGCACAATAGAAAAGAAGA+TGG - chr8_1:43109072-43109091 Msa1195270:intron 35.0%
AGTCATGACCATAAATGCTA+TGG + chr8_1:43109152-43109171 None:intergenic 35.0%
ATATCCATAGAGAATGAGAG+CGG + chr8_1:43109275-43109294 None:intergenic 35.0%
GATGGAAACATAAAGTGAGA+TGG + chr8_1:43109305-43109324 None:intergenic 35.0%
ACAATCCTCTCTGATAAAAC+TGG - chr8_1:43109448-43109467 Msa1195270:intron 35.0%
!! AAGTTCCAGTTTTATCAGAG+AGG + chr8_1:43109456-43109475 None:intergenic 35.0%
!!! CTTTTTGAAGTGCTCTATTG+CGG - chr8_1:43109495-43109514 Msa1195270:intron 35.0%
!!! TTTTTGAAGTGCTCTATTGC+GGG - chr8_1:43109496-43109515 Msa1195270:intron 35.0%
ACCGTCTCATGAATTGTAAT+TGG - chr8_1:43109752-43109771 Msa1195270:CDS 35.0%
TATGGCAAACTGCTAGTATT+CGG + chr8_1:43109816-43109835 None:intergenic 35.0%
!!! AATTTGGCTTTGAGTTTTGC+AGG - chr8_1:43109926-43109945 Msa1195270:intron 35.0%
ACGTGTGAAAATACTTGACT+GGG + chr8_1:43109956-43109975 None:intergenic 35.0%
GTGAAAGAATATCTGCTTCA+GGG - chr8_1:43109974-43109993 Msa1195270:CDS 35.0%
ATATCTTGTAATGCCTGCTT+GGG + chr8_1:43110075-43110094 None:intergenic 35.0%
! TACTTTTGCGTGAATCATTC+AGG - chr8_1:43110135-43110154 Msa1195270:intron 35.0%
! ACTTTTGCGTGAATCATTCA+GGG - chr8_1:43110136-43110155 Msa1195270:intron 35.0%
AAGATTCTTCTATGGAAGCA+GGG + chr8_1:43110442-43110461 None:intergenic 35.0%
CACGTATTACTCTCATAAAG+AGG - chr8_1:43110473-43110492 Msa1195270:CDS 35.0%
! CATCCATTCTTTTTCTTGCT+CGG - chr8_1:43110522-43110541 Msa1195270:CDS 35.0%
AAACCGAGCAAGAAAAAGAA+TGG + chr8_1:43110528-43110547 None:intergenic 35.0%
TTTGATCGTTTGTCCAAGAA+CGG - chr8_1:43110560-43110579 Msa1195270:CDS 35.0%
ATAGAAGACAAACTGCAGAA+AGG - chr8_1:43110806-43110825 Msa1195270:intron 35.0%
TAGAAGACAAACTGCAGAAA+GGG - chr8_1:43110807-43110826 Msa1195270:intron 35.0%
! TTCAATGCTTTATTCTCCTC+AGG - chr8_1:43110915-43110934 Msa1195270:CDS 35.0%
AGCAAGTTTATCAATGCACT+CGG + chr8_1:43110944-43110963 None:intergenic 35.0%
! ATTGATAAACTTGCTCAAGC+TGG - chr8_1:43110949-43110968 Msa1195270:CDS 35.0%
!! TCAAGCTGGTCTTAAGATTT+GGG - chr8_1:43110963-43110982 Msa1195270:CDS 35.0%
!! CTTAAGATTTGGGTATTGAC+GGG - chr8_1:43110973-43110992 Msa1195270:CDS 35.0%
!! TTAAGATTTGGGTATTGACG+GGG - chr8_1:43110974-43110993 Msa1195270:CDS 35.0%
ATGGAAACTGCAATCAACAT+TGG - chr8_1:43111003-43111022 Msa1195270:intron 35.0%
TGGAAACTGCAATCAACATT+GGG - chr8_1:43111004-43111023 Msa1195270:intron 35.0%
AGTATCCAATGATACCAAAC+AGG - chr8_1:43111220-43111239 Msa1195270:CDS 35.0%
CGTATCAGAGTTAACTTTAC+AGG - chr8_1:43111264-43111283 Msa1195270:CDS 35.0%
TGCTACACAAATGATAAAGC+TGG - chr8_1:43111371-43111390 Msa1195270:CDS 35.0%
ACAAATGATAAAGCTGGAGA+AGG - chr8_1:43111377-43111396 Msa1195270:CDS 35.0%
ATTAATGCAAATGCTGCATG+AGG + chr8_1:43111405-43111424 None:intergenic 35.0%
! CGTTTTCTGTTGTGATTTTG+TGG - chr8_1:43111563-43111582 Msa1195270:CDS 35.0%
! GTTTTCCTATTTAACTACGG+TGG + chr8_1:43111657-43111676 None:intergenic 35.0%
GTCCTGATTTCTTAATCTTC+TGG - chr8_1:43111794-43111813 Msa1195270:CDS 35.0%
CACAAGACAACTATGAGAAA+AGG + chr8_1:43112217-43112236 None:intergenic 35.0%
! GATTGCCCAATTTCGATTTT+TGG - chr8_1:43112589-43112608 Msa1195270:CDS 35.0%
TTACAAGAGAATTGCACAGA+TGG - chr8_1:43112643-43112662 Msa1195270:CDS 35.0%
TCAGTTAAGAAGAGGAATGA+AGG + chr8_1:43112812-43112831 None:intergenic 35.0%
ATAGGCCTCAAAGTAAAAGA+TGG + chr8_1:43112892-43112911 None:intergenic 35.0%
!!! TTTTACTTTGAGGCCTATAC+AGG - chr8_1:43112894-43112913 Msa1195270:CDS 35.0%
! TCATTACCTGTCATTTCACT+TGG - chr8_1:43112978-43112997 Msa1195270:exon 35.0%
AATACACCAAGTGAAATGAC+AGG + chr8_1:43112987-43113006 None:intergenic 35.0%
GAATGCTTGATCGTAGAATA+TGG + chr8_1:43113239-43113258 None:intergenic 35.0%
GATTATGCAAGTGAACATTG+TGG + chr8_1:43113302-43113321 None:intergenic 35.0%
CAATGTTCACTTGCATAATC+TGG - chr8_1:43113302-43113321 Msa1195270:intron 35.0%
!! TGACAATGAGCCATTTTACA+TGG - chr8_1:43113347-43113366 Msa1195270:intron 35.0%
TACCTCTTTCTCATGATGTA+TGG - chr8_1:43113409-43113428 Msa1195270:intron 35.0%
ATAAGGAAGAATGCATGCAA+CGG + chr8_1:43113530-43113549 None:intergenic 35.0%
!!! TCAAAGATGTTTTAGTCCCA+TGG - chr8_1:43113567-43113586 Msa1195270:intron 35.0%
GCTTGATTTCTTGGATAATG+TGG + chr8_1:43113597-43113616 None:intergenic 35.0%
TCTTGTAGTGCTTGATTTCT+TGG + chr8_1:43113606-43113625 None:intergenic 35.0%
GCACTACAAGAAAGATATTG+AGG - chr8_1:43113615-43113634 Msa1195270:intron 35.0%
ATATTGAGGATCAATCCATG+TGG - chr8_1:43113629-43113648 Msa1195270:intron 35.0%
TATTGAGGATCAATCCATGT+GGG - chr8_1:43113630-43113649 Msa1195270:intron 35.0%
CAAGACAAGAAACCAAGATT+GGG - chr8_1:43113671-43113690 Msa1195270:intron 35.0%
AGCAAAGATCAGACAATTGA+AGG - chr8_1:43113711-43113730 Msa1195270:intron 35.0%
GCAAAGATCAGACAATTGAA+GGG - chr8_1:43113712-43113731 Msa1195270:intron 35.0%
TGTCAATTATGTACGTACTG+GGG + chr8_1:43113776-43113795 None:intergenic 35.0%
GAAAGGAAAACGAACCAAAC+GGG + chr8_1:43107339-43107358 None:intergenic 40.0%
!! AATGTTGGTTTGAATAGGGG+TGG - chr8_1:43107702-43107721 Msa1195270:CDS 40.0%
!! ATGTTGGTTTGAATAGGGGT+GGG - chr8_1:43107703-43107722 Msa1195270:CDS 40.0%
AACACTGACATGCCTTTGAT+CGG + chr8_1:43107878-43107897 None:intergenic 40.0%
CCAAAAAACAGCTAGTGGAA+GGG + chr8_1:43108105-43108124 None:intergenic 40.0%
!!! CCTTCCACTAGCTGTTTTTT+GGG - chr8_1:43108103-43108122 Msa1195270:intron 40.0%
CTCTACTTTGAGCTGAATTG+CGG - chr8_1:43108161-43108180 Msa1195270:CDS 40.0%
GAATTGCGGCTAAATGACAA+AGG - chr8_1:43108175-43108194 Msa1195270:CDS 40.0%
AAATGACAAAGGGAAGGATC+AGG - chr8_1:43108186-43108205 Msa1195270:CDS 40.0%
AATGACAAAGGGAAGGATCA+GGG - chr8_1:43108187-43108206 Msa1195270:CDS 40.0%
!! GCTCCTTTAGCATTTGTTGT+CGG - chr8_1:43108518-43108537 Msa1195270:CDS 40.0%
!! CTCCTTTAGCATTTGTTGTC+GGG - chr8_1:43108519-43108538 Msa1195270:CDS 40.0%
!! ATTTGTTGTCGGGCTTAGTA+TGG - chr8_1:43108529-43108548 Msa1195270:CDS 40.0%
TCGTGGCAGAATATTATGGT+TGG - chr8_1:43108653-43108672 Msa1195270:intron 40.0%
TGAAGATGGGATATGCTATG+TGG - chr8_1:43108742-43108761 Msa1195270:intron 40.0%
GTGGAGACGATGAATTTAGA+TGG - chr8_1:43108761-43108780 Msa1195270:intron 40.0%
!! AAGATCTTTGGAGTCTACCT+TGG - chr8_1:43108805-43108824 Msa1195270:intron 40.0%
! TAAATCACTATCTAGGGCCA+AGG + chr8_1:43108825-43108844 None:intergenic 40.0%
AAAGTGTAAAGACTGGGGTT+CGG + chr8_1:43108887-43108906 None:intergenic 40.0%
! CCCAGTCTTTACACTTTTGT+TGG - chr8_1:43108890-43108909 Msa1195270:intron 40.0%
TAGGATCAAGAGGATAAACC+TGG + chr8_1:43108934-43108953 None:intergenic 40.0%
TGTTCCTGAGCTTAGAATCT+CGG + chr8_1:43108970-43108989 None:intergenic 40.0%
CACCGAATACATATATGGAG+TGG - chr8_1:43108988-43109007 Msa1195270:intron 40.0%
!! TATGGAGTGGTCATTTTCAC+TGG - chr8_1:43109001-43109020 Msa1195270:intron 40.0%
ATTACCGCTCTCATTCTCTA+TGG - chr8_1:43109268-43109287 Msa1195270:CDS 40.0%
CTCACTTTATGTTTCCATCG+AGG - chr8_1:43109306-43109325 Msa1195270:CDS 40.0%
TAAAACCTTCACAACCTCGA+TGG + chr8_1:43109323-43109342 None:intergenic 40.0%
TTTGAATGAAGAGTTGGGTC+AGG - chr8_1:43109420-43109439 Msa1195270:intron 40.0%
ATAGGAAAGCTCAGGTTTCA+TGG - chr8_1:43109626-43109645 Msa1195270:CDS 40.0%
TAGGAAAGCTCAGGTTTCAT+GGG - chr8_1:43109627-43109646 Msa1195270:CDS 40.0%
! GAGACTGTTGTTACTTCCAA+AGG - chr8_1:43109682-43109701 Msa1195270:CDS 40.0%
! TGTTACTTCCAAAGGTGATG+AGG - chr8_1:43109690-43109709 Msa1195270:CDS 40.0%
! CTTTTGATCCTCATCACCTT+TGG + chr8_1:43109701-43109720 None:intergenic 40.0%
GATCAAAAGCAGGCCATAAA+GGG - chr8_1:43109712-43109731 Msa1195270:CDS 40.0%
CACGTGTGAAAATACTTGAC+TGG + chr8_1:43109957-43109976 None:intergenic 40.0%
CGTGAAAGAATATCTGCTTC+AGG - chr8_1:43109973-43109992 Msa1195270:CDS 40.0%
TATCTTGTAATGCCTGCTTG+GGG + chr8_1:43110074-43110093 None:intergenic 40.0%
CATATCTTGTAATGCCTGCT+TGG + chr8_1:43110076-43110095 None:intergenic 40.0%
AGATTCTTCTATGGAAGCAG+GGG + chr8_1:43110441-43110460 None:intergenic 40.0%
CAAGATTCTTCTATGGAAGC+AGG + chr8_1:43110443-43110462 None:intergenic 40.0%
! CAAATACGCTTTTCCGTTCT+TGG + chr8_1:43110576-43110595 None:intergenic 40.0%
! CAAGAACGGAAAAGCGTATT+TGG - chr8_1:43110574-43110593 Msa1195270:CDS 40.0%
! CACTAGCTCTTTCCTATAGA+AGG - chr8_1:43110645-43110664 Msa1195270:intron 40.0%
AGAAGACAAACTGCAGAAAG+GGG - chr8_1:43110808-43110827 Msa1195270:intron 40.0%
GCAAGTTTATCAATGCACTC+GGG + chr8_1:43110943-43110962 None:intergenic 40.0%
!! CTCAAGCTGGTCTTAAGATT+TGG - chr8_1:43110962-43110981 Msa1195270:CDS 40.0%
!! TAAGATTTGGGTATTGACGG+GGG - chr8_1:43110975-43110994 Msa1195270:CDS 40.0%
ATACGAGGCTAGATAGTTTG+TGG + chr8_1:43111038-43111057 None:intergenic 40.0%
GAGTACCTGTTTGGTATCAT+TGG + chr8_1:43111228-43111247 None:intergenic 40.0%
! CTCGTGTTTTATCTGACGTT+GGG - chr8_1:43111287-43111306 Msa1195270:CDS 40.0%
! CGGTGTTAAGCAAAAGAACT+AGG + chr8_1:43111313-43111332 None:intergenic 40.0%
!! TGACGTGAAGCACCAATTTT+TGG - chr8_1:43111461-43111480 Msa1195270:CDS 40.0%
!! GACGTGAAGCACCAATTTTT+GGG - chr8_1:43111462-43111481 Msa1195270:CDS 40.0%
TGTATGCATGATTGCTCACA+TGG - chr8_1:43111629-43111648 Msa1195270:CDS 40.0%
TGGATCCACCGTAGTTAAAT+AGG - chr8_1:43111649-43111668 Msa1195270:CDS 40.0%
GCCCAGAAGATTAAGAAATC+AGG + chr8_1:43111799-43111818 None:intergenic 40.0%
ATTTCTTAATCTTCTGGGCC+AGG - chr8_1:43111800-43111819 Msa1195270:CDS 40.0%
CAAGAAGCAGATATTGGTGT+TGG - chr8_1:43111900-43111919 Msa1195270:CDS 40.0%
!! GATATTGGTGTTGGAATCAG+CGG - chr8_1:43111909-43111928 Msa1195270:CDS 40.0%
!! ATATTGGTGTTGGAATCAGC+GGG - chr8_1:43111910-43111929 Msa1195270:CDS 40.0%
GCTTGAGACCACAACTTAAA+AGG + chr8_1:43112529-43112548 None:intergenic 40.0%
CAAGCATGCAATTTCCTTTC+AGG - chr8_1:43112544-43112563 Msa1195270:CDS 40.0%
AATTTCCTTTCAGGCAGTGA+TGG - chr8_1:43112553-43112572 Msa1195270:CDS 40.0%
CCGCTCCAAAAATCGAAATT+GGG + chr8_1:43112597-43112616 None:intergenic 40.0%
!! CCCAATTTCGATTTTTGGAG+CGG - chr8_1:43112594-43112613 Msa1195270:CDS 40.0%
TGATCGTCATTCTCACAAAC+TGG - chr8_1:43112686-43112705 Msa1195270:CDS 40.0%
CCTCAAAGTAAAAGATGGTG+AGG + chr8_1:43112887-43112906 None:intergenic 40.0%
! CCTCACCATCTTTTACTTTG+AGG - chr8_1:43112884-43112903 Msa1195270:CDS 40.0%
ACCAGTCATCATAAACCGAT+TGG + chr8_1:43112929-43112948 None:intergenic 40.0%
! TTCGTCGGAAGTTTGTTTAC+AGG - chr8_1:43113019-43113038 Msa1195270:five_prime_UTR 40.0%
TTTCCAGCACTTTACCAACA+AGG - chr8_1:43113121-43113140 Msa1195270:intron 40.0%
!!! ACAGATTTTTGGGTCCTTGT+TGG + chr8_1:43113138-43113157 None:intergenic 40.0%
ATATTAGGATGGATGGCCAA+TGG - chr8_1:43113175-43113194 Msa1195270:intron 40.0%
TTGATCGTAGAATATGGCGA+CGG + chr8_1:43113233-43113252 None:intergenic 40.0%
TATGGGGTAGCATAGTTACT+TGG - chr8_1:43113386-43113405 Msa1195270:intron 40.0%
! TGCCTACCATTTACTGATTG+AGG - chr8_1:43113459-43113478 Msa1195270:intron 40.0%
AGCCTCAATCAGTAAATGGT+AGG + chr8_1:43113464-43113483 None:intergenic 40.0%
! CATTTACTGATTGAGGCTCT+CGG - chr8_1:43113466-43113485 Msa1195270:intron 40.0%
TGGATAATGTGGTGATCCAT+GGG + chr8_1:43113586-43113605 None:intergenic 40.0%
TTGGATAATGTGGTGATCCA+TGG + chr8_1:43113587-43113606 None:intergenic 40.0%
GCAAGACAAGAAACCAAGAT+TGG - chr8_1:43113670-43113689 Msa1195270:intron 40.0%
GAGGGACAATGTTGAAGTTG+AGG + chr8_1:43107317-43107336 None:intergenic 45.0%
GTAATCGCATGTGTCAGTGT+CGG + chr8_1:43107911-43107930 None:intergenic 45.0%
AGAAGAACAAATCGGGGACA+AGG - chr8_1:43108062-43108081 Msa1195270:intron 45.0%
GAAGAACAAATCGGGGACAA+GGG - chr8_1:43108063-43108082 Msa1195270:intron 45.0%
AAGAACAAATCGGGGACAAG+GGG - chr8_1:43108064-43108083 Msa1195270:intron 45.0%
!!! CCCTTCCACTAGCTGTTTTT+TGG - chr8_1:43108102-43108121 Msa1195270:intron 45.0%
CCCAAAAAACAGCTAGTGGA+AGG + chr8_1:43108106-43108125 None:intergenic 45.0%
!!! TTGTTTTGGTGGGTATGCGT+TGG - chr8_1:43108128-43108147 Msa1195270:CDS 45.0%
AGCCCGACAACAAATGCTAA+AGG + chr8_1:43108524-43108543 None:intergenic 45.0%
! TAGTATGGCGAAGGAAGCAT+TGG - chr8_1:43108544-43108563 Msa1195270:CDS 45.0%
!! AAGCATTGGAAGATTCACGC+AGG - chr8_1:43108558-43108577 Msa1195270:CDS 45.0%
!!! GTGATGGTGTTTTTGGTCAC+AGG - chr8_1:43108630-43108649 Msa1195270:intron 45.0%
CAGGTCGTGGCAGAATATTA+TGG - chr8_1:43108649-43108668 Msa1195270:intron 45.0%
GATAGGAGAAGCAAATCAGC+TGG + chr8_1:43108713-43108732 None:intergenic 45.0%
AGATGGTGAGACCAACTTGA+AGG - chr8_1:43108778-43108797 Msa1195270:intron 45.0%
AAGTGTAAAGACTGGGGTTC+GGG + chr8_1:43108886-43108905 None:intergenic 45.0%
AAACTTTGAGTATGAGCGCC+AGG - chr8_1:43108913-43108932 Msa1195270:intron 45.0%
TCTCGGAGGAGAATTTGACT+AGG + chr8_1:43108953-43108972 None:intergenic 45.0%
!! CCTTTTTGAAGGGGATCTTG+TGG + chr8_1:43109053-43109072 None:intergenic 45.0%
CCACAAGATCCCCTTCAAAA+AGG - chr8_1:43109050-43109069 Msa1195270:intron 45.0%
CTAAGTACAGAACCCCAAAG+TGG - chr8_1:43109170-43109189 Msa1195270:intron 45.0%
CAAGGAACTTGGGATCATAC+TGG + chr8_1:43109225-43109244 None:intergenic 45.0%
CAGTATGATCCCAAGTTCCT+TGG - chr8_1:43109223-43109242 Msa1195270:CDS 45.0%
TGATCCCAAGTTCCTTGGAA+TGG - chr8_1:43109228-43109247 Msa1195270:CDS 45.0%
TGTTTCCATCGAGGTTGTGA+AGG - chr8_1:43109315-43109334 Msa1195270:CDS 45.0%
! CGAGGTTGTGAAGGTTTTAC+AGG - chr8_1:43109324-43109343 Msa1195270:CDS 45.0%
TCTATTGCGGGTACTCCATA+TGG - chr8_1:43109508-43109527 Msa1195270:intron 45.0%
TCACTTGAAGACGCACCATA+TGG + chr8_1:43109526-43109545 None:intergenic 45.0%
ATTGCTTCTGATCTCGAGGA+CGG - chr8_1:43109571-43109590 Msa1195270:intron 45.0%
TGAGCTTTCCTATGACGTAG+GGG + chr8_1:43109619-43109638 None:intergenic 45.0%
CTGAGCTTTCCTATGACGTA+GGG + chr8_1:43109620-43109639 None:intergenic 45.0%
AGGTGATGAGGATCAAAAGC+AGG - chr8_1:43109702-43109721 Msa1195270:CDS 45.0%
GGATCAAAAGCAGGCCATAA+AGG - chr8_1:43109711-43109730 Msa1195270:CDS 45.0%
AAGCAGGCCATAAAGGGATT+TGG - chr8_1:43109718-43109737 Msa1195270:CDS 45.0%
CTCGTAGCTGCAAGAGAATT+TGG - chr8_1:43109910-43109929 Msa1195270:intron 45.0%
!!! TTGGCTTTGAGTTTTGCAGG+AGG - chr8_1:43109929-43109948 Msa1195270:CDS 45.0%
AATATCTGCTTCAGGGCAAG+TGG - chr8_1:43109981-43110000 Msa1195270:CDS 45.0%
AAATTTGGCCCTCCTCATCA+CGG + chr8_1:43110223-43110242 None:intergenic 45.0%
! GAACGGAAAAGCGTATTTGG+AGG - chr8_1:43110577-43110596 Msa1195270:CDS 45.0%
ATAGAGAGGCAATGCTTGAG+CGG - chr8_1:43110735-43110754 Msa1195270:intron 45.0%
TGAGCGGGTCTCAGATATTA+TGG - chr8_1:43110751-43110770 Msa1195270:intron 45.0%
!! TTCCTGTAGTTTGCTTCGAC+AGG - chr8_1:43111160-43111179 Msa1195270:CDS 45.0%
!! TCCTGTAGTTTGCTTCGACA+GGG - chr8_1:43111161-43111180 Msa1195270:CDS 45.0%
! GCTCGTGTTTTATCTGACGT+TGG - chr8_1:43111286-43111305 Msa1195270:CDS 45.0%
! GTTCTTTTGCTTAACACCGC+AGG - chr8_1:43111314-43111333 Msa1195270:CDS 45.0%
ATGTTGTCCTTAATGGCCTG+CGG + chr8_1:43111333-43111352 None:intergenic 45.0%
!!! GAAGCACCAATTTTTGGGAC+TGG - chr8_1:43111467-43111486 Msa1195270:CDS 45.0%
CAACTGCCAGTCCCAAAAAT+TGG + chr8_1:43111476-43111495 None:intergenic 45.0%
GTCGTAAGGCTGGTAAAACA+AGG - chr8_1:43111822-43111841 Msa1195270:CDS 45.0%
AGGCTGGTAAAACAAGGAAC+TGG - chr8_1:43111828-43111847 Msa1195270:CDS 45.0%
GGCTGGTAAAACAAGGAACT+GGG - chr8_1:43111829-43111848 Msa1195270:CDS 45.0%
ACCACTCTTGCAATAGGTGA+TGG - chr8_1:43111855-43111874 Msa1195270:CDS 45.0%
ACCATCACCTATTGCAAGAG+TGG + chr8_1:43111859-43111878 None:intergenic 45.0%
! GGTGATGGTGCAAATGATGT+TGG - chr8_1:43111870-43111889 Msa1195270:CDS 45.0%
!! TATTGGTGTTGGAATCAGCG+GGG - chr8_1:43111911-43111930 Msa1195270:CDS 45.0%
! GTTTGGACTTGCTTTCAAGC+TGG - chr8_1:43112162-43112181 Msa1195270:CDS 45.0%
AGCTTCTGAACTGATGCAAG+AGG - chr8_1:43112242-43112261 Msa1195270:CDS 45.0%
GCCGCTCCAAAAATCGAAAT+TGG + chr8_1:43112598-43112617 None:intergenic 45.0%
TCTTGTAACACCAGTGTCCA+TGG + chr8_1:43112631-43112650 None:intergenic 45.0%
CAAAGGATACACAACACGCA+AGG + chr8_1:43112729-43112748 None:intergenic 45.0%
CGTGTTGTGTATCCTTTGCA+TGG - chr8_1:43112731-43112750 Msa1195270:CDS 45.0%
GTGCTTCTCTATCCATGCAA+AGG + chr8_1:43112746-43112765 None:intergenic 45.0%
GTAAAAGATGGTGAGGCCAA+AGG + chr8_1:43112880-43112899 None:intergenic 45.0%
GTCATCATAAACCGATTGGC+CGG + chr8_1:43112925-43112944 None:intergenic 45.0%
! GCCAATCGGTTTATGATGAC+TGG - chr8_1:43112925-43112944 Msa1195270:CDS 45.0%
GACGGAGGAATATAGACCAT+TGG + chr8_1:43113194-43113213 None:intergenic 45.0%
GATCAAGCATTCCGTGTTGA+TGG - chr8_1:43113247-43113266 Msa1195270:intron 45.0%
CAGATGTCTGACCATCAACA+CGG + chr8_1:43113261-43113280 None:intergenic 45.0%
TGATGGTCAGACATCTGACT+TGG - chr8_1:43113264-43113283 Msa1195270:intron 45.0%
!! ACATCTGACTTGGCTTCTCT+TGG - chr8_1:43113274-43113293 Msa1195270:intron 45.0%
CGCCATACATCATGAGAAAG+AGG + chr8_1:43113414-43113433 None:intergenic 45.0%
! TAGGCACTGTGAGAAAGGTT+GGG + chr8_1:43113445-43113464 None:intergenic 45.0%
! AATGGTAGGCACTGTGAGAA+AGG + chr8_1:43113450-43113469 None:intergenic 45.0%
CGAGAGCCTCAATCAGTAAA+TGG + chr8_1:43113468-43113487 None:intergenic 45.0%
TCTTGCAGTGAACCCAATCT+TGG + chr8_1:43113686-43113705 None:intergenic 45.0%
!!! ATAATTTTGTTTTTTTAATT+TGG - chr8_1:43107436-43107455 Msa1195270:CDS 5.0%
TCAACATTGTCCCTCCCGTT+TGG - chr8_1:43107322-43107341 Msa1195270:three_prime_UTR 50.0%
GGAAAACGAACCAAACGGGA+GGG + chr8_1:43107335-43107354 None:intergenic 50.0%
AGGAAAACGAACCAAACGGG+AGG + chr8_1:43107336-43107355 None:intergenic 50.0%
GATGTTGTCACTAACACGGG+TGG + chr8_1:43107961-43107980 None:intergenic 50.0%
GCGGCTAAATGACAAAGGGA+AGG - chr8_1:43108180-43108199 Msa1195270:CDS 50.0%
! TCTTCTCATGGATCTGAGGC+TGG + chr8_1:43108328-43108347 None:intergenic 50.0%
GGTCTCTTCTCATGGATCTG+AGG + chr8_1:43108332-43108351 None:intergenic 50.0%
AGATTCACGCAGGTTCGTTC+AGG - chr8_1:43108568-43108587 Msa1195270:CDS 50.0%
!!! GTGTTTTTGGTCACAGGTCG+TGG - chr8_1:43108636-43108655 Msa1195270:intron 50.0%
TCCTCCGAGATTCTAAGCTC+AGG - chr8_1:43108963-43108982 Msa1195270:intron 50.0%
TCCTGAGCTTAGAATCTCGG+AGG + chr8_1:43108967-43108986 None:intergenic 50.0%
AGTACAGAACCCCAAAGTGG+TGG - chr8_1:43109173-43109192 Msa1195270:intron 50.0%
GCGTATGTACCACCACTTTG+GGG + chr8_1:43109185-43109204 None:intergenic 50.0%
GGCGTATGTACCACCACTTT+GGG + chr8_1:43109186-43109205 None:intergenic 50.0%
ACTGGCGGTCAATTTCGTCA+GGG + chr8_1:43109207-43109226 None:intergenic 50.0%
TACTGGCGGTCAATTTCGTC+AGG + chr8_1:43109208-43109227 None:intergenic 50.0%
GGAACTTGGGATCATACTGG+CGG + chr8_1:43109222-43109241 None:intergenic 50.0%
CCAGCCATTCCAAGGAACTT+GGG + chr8_1:43109235-43109254 None:intergenic 50.0%
CCAAGTTCCTTGGAATGGCT+GGG - chr8_1:43109233-43109252 Msa1195270:CDS 50.0%
! TTTGAAGTCCGTGCATCAGC+TGG + chr8_1:43109400-43109419 None:intergenic 50.0%
GAATGAAGAGTTGGGTCAGG+TGG - chr8_1:43109423-43109442 Msa1195270:intron 50.0%
GCAGATTGCTTCTGATCTCG+AGG - chr8_1:43109567-43109586 Msa1195270:intron 50.0%
TTGCTTCTGATCTCGAGGAC+GGG - chr8_1:43109572-43109591 Msa1195270:intron 50.0%
CCTATGACGTAGGGGGAAAT+TGG + chr8_1:43109611-43109630 None:intergenic 50.0%
CCAATTTCCCCCTACGTCAT+AGG - chr8_1:43109608-43109627 Msa1195270:intron 50.0%
GAGCTTTCCTATGACGTAGG+GGG + chr8_1:43109618-43109637 None:intergenic 50.0%
CCTGAGCTTTCCTATGACGT+AGG + chr8_1:43109621-43109640 None:intergenic 50.0%
CCTACGTCATAGGAAAGCTC+AGG - chr8_1:43109618-43109637 Msa1195270:intron 50.0%
TCAGCTCAGGAATGGCAGTA+TGG + chr8_1:43109834-43109853 None:intergenic 50.0%
TGCCATTCCTGAGCTGAATG+AGG - chr8_1:43109837-43109856 Msa1195270:intron 50.0%
CTCCTCATTCAGCTCAGGAA+TGG + chr8_1:43109842-43109861 None:intergenic 50.0%
TCCTGAGCTGAATGAGGAGA+CGG - chr8_1:43109843-43109862 Msa1195270:intron 50.0%
AAGCCGAGTCTCCAGATGAA+GGG - chr8_1:43109881-43109900 Msa1195270:intron 50.0%
ACGAGAAAAGCCCCTTCATC+TGG + chr8_1:43109895-43109914 None:intergenic 50.0%
CTTCAGGGCAAGTGGTTGAA+AGG - chr8_1:43109989-43110008 Msa1195270:CDS 50.0%
TGTAATGCCTGCTTGGGGTT+GGG + chr8_1:43110069-43110088 None:intergenic 50.0%
TTGTAATGCCTGCTTGGGGT+TGG + chr8_1:43110070-43110089 None:intergenic 50.0%
GTCAGTGATTGTCCGTGATG+AGG - chr8_1:43110208-43110227 Msa1195270:CDS 50.0%
AGTGATTGTCCGTGATGAGG+AGG - chr8_1:43110211-43110230 Msa1195270:CDS 50.0%
GTGATTGTCCGTGATGAGGA+GGG - chr8_1:43110212-43110231 Msa1195270:CDS 50.0%
AGAAAGCCAAAGCAGCCGTT+GGG - chr8_1:43110708-43110727 Msa1195270:intron 50.0%
TAGAGAGGCAATGCTTGAGC+GGG - chr8_1:43110736-43110755 Msa1195270:intron 50.0%
GACAAACTGCAGAAAGGGGT+AGG - chr8_1:43110812-43110831 Msa1195270:intron 50.0%
!! GGTATTGACGGGGGATAAGA+TGG - chr8_1:43110984-43111003 Msa1195270:CDS 50.0%
TCCCTGTCGAAGCAAACTAC+AGG + chr8_1:43111165-43111184 None:intergenic 50.0%
CTTAACACCGCAGGCCATTA+AGG - chr8_1:43111323-43111342 Msa1195270:CDS 50.0%
! CCTACCAGTGCCTTTTGCTT+GGG + chr8_1:43111531-43111550 None:intergenic 50.0%
! TCCTACCAGTGCCTTTTGCT+TGG + chr8_1:43111532-43111551 None:intergenic 50.0%
! GTTTTACCAGCCTTACGACC+TGG + chr8_1:43111821-43111840 None:intergenic 50.0%
GGGAAGACCACTCTTGCAAT+AGG - chr8_1:43111849-43111868 Msa1195270:CDS 50.0%
! GTTGAAGGTATGCAGGTCAG+TGG - chr8_1:43111933-43111952 Msa1195270:CDS 50.0%
!!! TCGATTTTTGGAGCGGCTTC+TGG - chr8_1:43112601-43112620 Msa1195270:CDS 50.0%
!!! ATTTTTGGAGCGGCTTCTGG+TGG - chr8_1:43112604-43112623 Msa1195270:CDS 50.0%
! GGTCCTTGTTGGTAAAGTGC+TGG + chr8_1:43113127-43113146 None:intergenic 50.0%
TCCTCCGTCGTCATCTTCTT+CGG - chr8_1:43113205-43113224 Msa1195270:intron 50.0%
! GTAGGCACTGTGAGAAAGGT+TGG + chr8_1:43113446-43113465 None:intergenic 50.0%
TCGGACCTGCGCCTATTTAT+TGG - chr8_1:43113485-43113504 Msa1195270:intron 50.0%
CGGACCTGCGCCTATTTATT+GGG - chr8_1:43113486-43113505 Msa1195270:intron 50.0%
GTTGCCCAATAAATAGGCGC+AGG + chr8_1:43113493-43113512 None:intergenic 50.0%
AGGATCAATCCATGTGGGTG+AGG - chr8_1:43113635-43113654 Msa1195270:intron 50.0%
GGATCAATCCATGTGGGTGA+GGG - chr8_1:43113636-43113655 Msa1195270:intron 50.0%
GATTGGGTTCACTGCAAGAG+TGG - chr8_1:43113687-43113706 Msa1195270:intron 50.0%
!! TGATCGGAAGTGTCAGCGCT+AGG + chr8_1:43107862-43107881 None:intergenic 55.0%
! GCGCTGACACTTCCGATCAA+AGG - chr8_1:43107863-43107882 Msa1195270:CDS 55.0%
CAAAGGGAAGGATCAGGGCA+AGG - chr8_1:43108192-43108211 Msa1195270:CDS 55.0%
TCGAGCCTCTGCTACTACTG+AGG - chr8_1:43108250-43108269 Msa1195270:CDS 55.0%
AGCCTCTGCTACTACTGAGG+AGG - chr8_1:43108253-43108272 Msa1195270:CDS 55.0%
GCCTCTGCTACTACTGAGGA+GGG - chr8_1:43108254-43108273 Msa1195270:CDS 55.0%
CCTCTGCTACTACTGAGGAG+GGG - chr8_1:43108255-43108274 Msa1195270:CDS 55.0%
GCCTCATCCACTTCAAGGTC+CGG - chr8_1:43108277-43108296 Msa1195270:CDS 55.0%
CCTCATCCACTTCAAGGTCC+GGG - chr8_1:43108278-43108297 Msa1195270:CDS 55.0%
TGTCGGGCTTAGTATGGCGA+AGG - chr8_1:43108535-43108554 Msa1195270:CDS 55.0%
GGGCGTATGTACCACCACTT+TGG + chr8_1:43109187-43109206 None:intergenic 55.0%
CCCAAGTTCCTTGGAATGGC+TGG - chr8_1:43109232-43109251 Msa1195270:CDS 55.0%
CCCAGCCATTCCAAGGAACT+TGG + chr8_1:43109236-43109255 None:intergenic 55.0%
GACTCATCCCAGCCATTCCA+AGG + chr8_1:43109243-43109262 None:intergenic 55.0%
TGCTTCTGATCTCGAGGACG+GGG - chr8_1:43109573-43109592 Msa1195270:intron 55.0%
CCTGAGCTGAATGAGGAGAC+GGG - chr8_1:43109844-43109863 Msa1195270:intron 55.0%
GAAGCCGAGTCTCCAGATGA+AGG - chr8_1:43109880-43109899 Msa1195270:intron 55.0%
AGCCGAGTCTCCAGATGAAG+GGG - chr8_1:43109882-43109901 Msa1195270:intron 55.0%
AGCCCCTTCATCTGGAGACT+CGG + chr8_1:43109887-43109906 None:intergenic 55.0%
TTCTGTGCAAAGGGGCAGAC+AGG - chr8_1:43110246-43110265 Msa1195270:intron 55.0%
CAGAAAGCCAAAGCAGCCGT+TGG - chr8_1:43110707-43110726 Msa1195270:intron 55.0%
GAAAGCCAAAGCAGCCGTTG+GGG - chr8_1:43110709-43110728 Msa1195270:intron 55.0%
TGCCTCTCTATCAGCCCCAA+CGG + chr8_1:43110726-43110745 None:intergenic 55.0%
TCAATGCACTCGGGAACCTG+AGG + chr8_1:43110934-43110953 None:intergenic 55.0%
TCGCGTGTCTCCCAAGCAAA+AGG - chr8_1:43111518-43111537 Msa1195270:CDS 55.0%
! GTCTCCCAAGCAAAAGGCAC+TGG - chr8_1:43111524-43111543 Msa1195270:CDS 55.0%
!! CCCAAGCAAAAGGCACTGGT+AGG - chr8_1:43111528-43111547 Msa1195270:CDS 55.0%
ATCTTCTGGGCCAGGTCGTA+AGG - chr8_1:43111808-43111827 Msa1195270:CDS 55.0%
GTTGGAATCAGCGGGGTTGA+AGG - chr8_1:43111918-43111937 Msa1195270:CDS 55.0%
AAGCTGGACTGTGCACCAGA+TGG - chr8_1:43112178-43112197 Msa1195270:CDS 55.0%
GGCTTGACAAGACGTCCATC+TGG + chr8_1:43112196-43112215 None:intergenic 55.0%
GCTAGCCATCACTGCCTGAA+AGG + chr8_1:43112561-43112580 None:intergenic 55.0%
TTCTGGTGGTCCATGGACAC+TGG - chr8_1:43112618-43112637 Msa1195270:CDS 55.0%
GAGGCCTATACAGGCTTCTC+CGG - chr8_1:43112903-43112922 Msa1195270:CDS 55.0%
TTGGCCGGAGAAGCCTGTAT+AGG + chr8_1:43112910-43112929 None:intergenic 55.0%
TACAGGCTTCTCCGGCCAAT+CGG - chr8_1:43112911-43112930 Msa1195270:CDS 55.0%
! GGTGCCGAAGAAGATGACGA+CGG + chr8_1:43113212-43113231 None:intergenic 55.0%
AGAACTCTCCCTCACCCACA+TGG + chr8_1:43113647-43113666 None:intergenic 55.0%
GGGGACAAGGGGCAGTTTGA+TGG - chr8_1:43108075-43108094 Msa1195270:intron 60.0%
CCCCTCCTCAGTAGTAGCAG+AGG + chr8_1:43108258-43108277 None:intergenic 60.0%
GAGGGGCCTCATCCACTTCA+AGG - chr8_1:43108272-43108291 Msa1195270:CDS 60.0%
CCCGGACCTTGAAGTGGATG+AGG + chr8_1:43108281-43108300 None:intergenic 60.0%
GAGTAGCCCGGACCTTGAAG+TGG + chr8_1:43108287-43108306 None:intergenic 60.0%
! CTGAGGCTGGTTGCAGTGCA+CGG + chr8_1:43108315-43108334 None:intergenic 60.0%
CCGTGCATCAGCTGGAGTTC+CGG + chr8_1:43109392-43109411 None:intergenic 60.0%
CCGGAACTCCAGCTGATGCA+CGG - chr8_1:43109389-43109408 Msa1195270:intron 60.0%
CCCGTCTCCTCATTCAGCTC+AGG + chr8_1:43109847-43109866 None:intergenic 60.0%
GAGCTGAATGAGGAGACGGG+TGG - chr8_1:43109847-43109866 Msa1195270:intron 60.0%
TTGCACTCCCAACCCCAAGC+AGG - chr8_1:43110059-43110078 Msa1195270:intron 60.0%
ATCAGCCCCAACGGCTGCTT+TGG + chr8_1:43110717-43110736 None:intergenic 60.0%
AGCCGTTGGGGCTGATAGAG+AGG - chr8_1:43110721-43110740 Msa1195270:intron 60.0%
! CAGCGGGGTTGAAGGTATGC+AGG - chr8_1:43111926-43111945 Msa1195270:CDS 60.0%
GCCGAAGAAGATGACGACGG+AGG + chr8_1:43113209-43113228 None:intergenic 60.0%
GGATCAGGGCAAGGCTCCGA+AGG - chr8_1:43108201-43108220 Msa1195270:CDS 65.0%
TGCACGGTTCGCGAGTAGCC+CGG + chr8_1:43108299-43108318 None:intergenic 65.0%
TCTGGGCCAGGTCGTAAGGC+TGG - chr8_1:43111812-43111831 Msa1195270:CDS 65.0%
GAGCGGCTTCTGGTGGTCCA+TGG - chr8_1:43112611-43112630 Msa1195270:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 43107188 43113980 43107188 ID=Msa1195270;Name=Msa1195270
chr8_1 mRNA 43107188 43113980 43107188 ID=Msa1195270-mRNA-1;Parent=Msa1195270;Name=Msa1195270-mRNA-1;_AED=0.07;_eAED=0.07;_QI=287|1|1|1|0.9|0.81|11|191|1226
chr8_1 exon 43107188 43108047 43107188 ID=Msa1195270-mRNA-1:exon:13947;Parent=Msa1195270-mRNA-1
chr8_1 exon 43108128 43108319 43108128 ID=Msa1195270-mRNA-1:exon:13946;Parent=Msa1195270-mRNA-1
chr8_1 exon 43108504 43108602 43108504 ID=Msa1195270-mRNA-1:exon:13945;Parent=Msa1195270-mRNA-1
chr8_1 exon 43109221 43109346 43109221 ID=Msa1195270-mRNA-1:exon:13944;Parent=Msa1195270-mRNA-1
chr8_1 exon 43109623 43109832 43109623 ID=Msa1195270-mRNA-1:exon:13943;Parent=Msa1195270-mRNA-1
chr8_1 exon 43109927 43110011 43109927 ID=Msa1195270-mRNA-1:exon:13942;Parent=Msa1195270-mRNA-1
chr8_1 exon 43110143 43110231 43110143 ID=Msa1195270-mRNA-1:exon:13941;Parent=Msa1195270-mRNA-1
chr8_1 exon 43110339 43110615 43110339 ID=Msa1195270-mRNA-1:exon:13940;Parent=Msa1195270-mRNA-1
chr8_1 exon 43110901 43111011 43110901 ID=Msa1195270-mRNA-1:exon:13939;Parent=Msa1195270-mRNA-1
chr8_1 exon 43111158 43113111 43111158 ID=Msa1195270-mRNA-1:exon:13938;Parent=Msa1195270-mRNA-1
chr8_1 exon 43113825 43113980 43113825 ID=Msa1195270-mRNA-1:exon:13937;Parent=Msa1195270-mRNA-1
chr8_1 five_prime_UTR 43113825 43113980 43113825 ID=Msa1195270-mRNA-1:five_prime_utr;Parent=Msa1195270-mRNA-1
chr8_1 five_prime_UTR 43112981 43113111 43112981 ID=Msa1195270-mRNA-1:five_prime_utr;Parent=Msa1195270-mRNA-1
chr8_1 CDS 43111158 43112980 43111158 ID=Msa1195270-mRNA-1:cds;Parent=Msa1195270-mRNA-1
chr8_1 CDS 43110901 43111011 43110901 ID=Msa1195270-mRNA-1:cds;Parent=Msa1195270-mRNA-1
chr8_1 CDS 43110339 43110615 43110339 ID=Msa1195270-mRNA-1:cds;Parent=Msa1195270-mRNA-1
chr8_1 CDS 43110143 43110231 43110143 ID=Msa1195270-mRNA-1:cds;Parent=Msa1195270-mRNA-1
chr8_1 CDS 43109927 43110011 43109927 ID=Msa1195270-mRNA-1:cds;Parent=Msa1195270-mRNA-1
chr8_1 CDS 43109623 43109832 43109623 ID=Msa1195270-mRNA-1:cds;Parent=Msa1195270-mRNA-1
chr8_1 CDS 43109221 43109346 43109221 ID=Msa1195270-mRNA-1:cds;Parent=Msa1195270-mRNA-1
chr8_1 CDS 43108504 43108602 43108504 ID=Msa1195270-mRNA-1:cds;Parent=Msa1195270-mRNA-1
chr8_1 CDS 43108128 43108319 43108128 ID=Msa1195270-mRNA-1:cds;Parent=Msa1195270-mRNA-1
chr8_1 CDS 43107379 43108047 43107379 ID=Msa1195270-mRNA-1:cds;Parent=Msa1195270-mRNA-1
chr8_1 three_prime_UTR 43107188 43107378 43107188 ID=Msa1195270-mRNA-1:three_prime_utr;Parent=Msa1195270-mRNA-1
Gene Sequence

>Msa1195270

ATGACAAAGGGAAGGATCAGGGCAAGGCTCCGAAGGAGCAATTTTTACACATTTGGTTGTCTTCGAGCCTCTGCTACTACTGAGGAGGGGCCTCATCCACTTCAAGGTCCGGGCTACTCGCGAACCGTGCACTGCAACCAGCCTCAGATCCATGAGAAGAGACCTTTCTATTATTGCAAGAATGATATTTCCACAACCAAATACAATGTGCTTACATTTTTGCCCAAAGCAATTTTTGAACAGTTTCGTAGGGTTGCTAATATATACTTTCTTTTGGCTGCGTGTCTCTCGTATACTCCAATGTCACCTTTTAGTGCATTGAGTATGATTGCTCCTTTAGCATTTGTTGTCGGGCTTAGTATGGCGAAGGAAGCATTGGAAGATTCACGCAGGTTCGTTCAGGATGTTAAAGTTAATCGTCGAAAAGTTAATCACCATAAAGGTGATGGTGTTTTTGGTCACAGGTCGTGGCAGAATATTATGGTTGGCGATGTAGTAAAAGTAGAAAAGGATAAGTTTTTTCCAGCTGATTTGCTTCTCCTATCGTCAAGTTATGAAGATGGGATATGCTATGTGGAGACGATGAATTTAGATGGTGAGACCAACTTGAAGGTTAAAAGATCTTTGGAGTCTACCTTGGCCCTAGATAGTGATTTAGCTTTTAAGGATTTCACTGGAACAATAAGATGTGAAGACCCGAACCCCAGTCTTTACACTTTTGTTGGAAACTTTGAGTATGAGCGCCAGGTTTATCCTCTTGATCCTAGTCAAATTCTCCTCCGAGATTCTAAGCTCAGGAACACCGAATACATATATGGAGTGGTCATTTTCACTGGTCACGACAGCAAAGTCATGCAGAATTCCACAAGATCCCCTTCAAAAAGGAGCACAATAGAAAAGAAGATGGATTATATCATATACACTCTCTTCACTGTCCTTATATTTATATCTGTCATTAGTACCATAGCATTTATGGTCATGACTAAGTACAGAACCCCAAAGTGGTGGTACATACGCCCTGACGAAATTGACCGCCAGTATGATCCCAAGTTCCTTGGAATGGCTGGGATGAGTCATTTGATTACCGCTCTCATTCTCTATGGATATTTGATACCCATCTCACTTTATGTTTCCATCGAGGTTGTGAAGGTTTTACAGGCAACCTTCATTAACCAAGACATTCTAATGTATGATGAAGAAACCGGAACTCCAGCTGATGCACGGACTTCAAATTTGAATGAAGAGTTGGGTCAGGTGGATACAATCCTCTCTGATAAAACTGGAACTTTAACATGTAATCAGATGGACTTTTTGAAGTGCTCTATTGCGGGTACTCCATATGGTGCGTCTTCAAGTGAAGTTGAACTTGCTGCTGCAAAGCAGATTGCTTCTGATCTCGAGGACGGGGATTCAGATCTCTCCAATTTCCCCCTACGTCATAGGAAAGCTCAGGTTTCATGGGAAAACATTGATAAAGTTGATGAAATTGAACTAGAGACTGTTGTTACTTCCAAAGGTGATGAGGATCAAAAGCAGGCCATAAAGGGATTTGGTTTTGAAGACGACCGTCTCATGAATTGTAATTGGTTGCAAGAGCCCAATGTCGATGACATTTTATTATTTTTCCGAATACTAGCAGTTTGCCATACTGCCATTCCTGAGCTGAATGAGGAGACGGGTGGTTTTACATATGAAGCCGAGTCTCCAGATGAAGGGGCTTTTCTCGTAGCTGCAAGAGAATTTGGCTTTGAGTTTTGCAGGAGGACCCAGTCAAGTATTTTCACACGTGAAAGAATATCTGCTTCAGGGCAAGTGGTTGAAAGGGAGTACAAACTCTTGAATCTACTAGATTTCACAAGTAAAAGAAAGCGTATGTCAGTGATTGTCCGTGATGAGGAGGGCCAAATTTTTCTTCTGTGCAAAGGGGCAGACAGTATCATATTTGATCGTTTGTCCAAGAACGGAAAAGCGTATTTGGAGGCTACTACCAAGCATTTAAATGATTATGGAGAAACAGGTTTAAGAACACTAGCTCTTTCCTATAGAAGGCTTGAAGAAAAAGAGTACTCAGATTGGAACAATGAGTTTCAGAAAGCCAAAGCAGCCGTTGGGGCTGATAGAGAGGCAATGCTTGAGCGGGTCTCAGATATTATGGAAAAAGAGTTGATTCTTGTTGGGGCTACTGCTATAGAAGACAAACTGCAGAAAGGGGTTCCCGAGTGCATTGATAAACTTGCTCAAGCTGGTCTTAAGATTTGGGTATTGACGGGGGATAAGATGGAAACTGCAATCAACATTGGCTTTTCCTGTAGTTTGCTTCGACAGGGAATGAAGCAGATCTGTATAACTACGAATTCAGACTCAGTATCCAATGATACCAAACAGGCCATTAAGGACAACATATTAAATCAAATTACCAATGCTACACAAATGATAAAGCTGGAGAAGGATCCTCATGCAGCATTTGCATTAATTATTGATGGGAAAACTCTGACATATGCTTTAGAAGATGACGTGAAGCACCAATTTTTGGGACTGGCAGTTGATTGTGCATCTGTCATCTGCTGTCGCGTGTCTCCCAAGCAAAAGGCACTGGTCGTAAGGCTGGTAAAACAAGGAACTGGGAAGACCACTCTTGCAATAGGTGATGGTGCAAATGATGTTGGCATGATACAAGAAGCAGATATTGGTGTTGGAATCAGCGGGGTTGAAGGTATGCAGGCAGTGATGGCTAGCGACTTCTCGATTGCCCAATTTCGATTTTTGGAGCGGCTTCTGGTGGTCCATGGACACTGGTGTTACAAGAGAATTGCACAGATGATTTGTTATTTCTTTTACAAGAATATAGCCTTTGGCCTCACCATCTTTTACTTTGAGGCCTATACAGGCTTCTCCGGCCAATCGGTTTATGATGACTGGTACATGATATTGTTCAACGTTTGTTTGACATCATTACCTGTCATTTCACTTGGTGTATTTGAACAAGATGTTTCGTCGGAAGTTTGTTTACAGTTTCCAGCACTTTACCAACAAGGACCCAAAAATCTGTTCTTTGATTGGTATAGAATATTAGGATGGATGGCCAATGGTCTATATTCCTCCGTCGTCATCTTCTTCGGCACCGTCGCCATATTCTACGATCAAGCATTCCGTGTTGATGGTCAGACATCTGACTTGGCTTCTCTTGGAACCACAATGTTCACTTGCATAATCTGGGCAGTCAACTGTCAAATTTCACTGACAATGAGCCATTTTACATGGATTCAACATCTGTTTATATGGGGTAGCATAGTTACTTGGTACCTCTTTCTCATGATGTATGGCGCACTTTCTCCCAACCTTTCTCACAGTGCCTACCATTTACTGATTGAGGCTCTCGGACCTGCGCCTATTTATTGGGCAACAACATTATTAGCTACCGTTGCATGCATTCTTCCTTATCTTATCCACATATCATTTCAAAGATGTTTTAGTCCCATGGATCACCACATTATCCAAGAAATCAAGCACTACAAGAAAGATATTGAGGATCAATCCATGTGGGTGAGGGAGAGTTCTAAAGCAAGACAAGAAACCAAGATTGGGTTCACTGCAAGAGTGGAAGCAAAGATCAGACAATTGAAGGGAAAGCTGCAGAAAAAACAATCTTTCTTGACTATTTTGTCCCCAGTACGTACATAA
Protein sequence

>Msa1195270

MTKGRIRARLRRSNFYTFGCLRASATTEEGPHPLQGPGYSRTVHCNQPQIHEKRPFYYCKNDISTTKYNVLTFLPKAIFEQFRRVANIYFLLAACLSYTPMSPFSALSMIAPLAFVVGLSMAKEALEDSRRFVQDVKVNRRKVNHHKGDGVFGHRSWQNIMVGDVVKVEKDKFFPADLLLLSSSYEDGICYVETMNLDGETNLKVKRSLESTLALDSDLAFKDFTGTIRCEDPNPSLYTFVGNFEYERQVYPLDPSQILLRDSKLRNTEYIYGVVIFTGHDSKVMQNSTRSPSKRSTIEKKMDYIIYTLFTVLIFISVISTIAFMVMTKYRTPKWWYIRPDEIDRQYDPKFLGMAGMSHLITALILYGYLIPISLYVSIEVVKVLQATFINQDILMYDEETGTPADARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTPYGASSSEVELAAAKQIASDLEDGDSDLSNFPLRHRKAQVSWENIDKVDEIELETVVTSKGDEDQKQAIKGFGFEDDRLMNCNWLQEPNVDDILLFFRILAVCHTAIPELNEETGGFTYEAESPDEGAFLVAAREFGFEFCRRTQSSIFTRERISASGQVVEREYKLLNLLDFTSKRKRMSVIVRDEEGQIFLLCKGADSIIFDRLSKNGKAYLEATTKHLNDYGETGLRTLALSYRRLEEKEYSDWNNEFQKAKAAVGADREAMLERVSDIMEKELILVGATAIEDKLQKGVPECIDKLAQAGLKIWVLTGDKMETAINIGFSCSLLRQGMKQICITTNSDSVSNDTKQAIKDNILNQITNATQMIKLEKDPHAAFALIIDGKTLTYALEDDVKHQFLGLAVDCASVICCRVSPKQKALVVRLVKQGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTIFYFEAYTGFSGQSVYDDWYMILFNVCLTSLPVISLGVFEQDVSSEVCLQFPALYQQGPKNLFFDWYRILGWMANGLYSSVVIFFGTVAIFYDQAFRVDGQTSDLASLGTTMFTCIIWAVNCQISLTMSHFTWIQHLFIWGSIVTWYLFLMMYGALSPNLSHSAYHLLIEALGPAPIYWATTLLATVACILPYLIHISFQRCFSPMDHHIIQEIKHYKKDIEDQSMWVRESSKARQETKIGFTARVEAKIRQLKGKLQKKQSFLTILSPVRT*