Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1196490 | sp|Q8L736|SKI11_ARATH | 68.702 | 393 | 115 | 5 | 96 | 483 | 78 | 467 | 0.0 | 553 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1196490 | A0A072U1V1 | 98.956 | 479 | 5 | 0 | 5 | 483 | 19 | 497 | 0.0 | 986 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1196490 | Msa1426140 | 0.847429 | 1.162726e-59 | -8.615850e-47 |
| Msa0866910 | Msa1196490 | 0.882762 | 7.934571e-71 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1196490 | MtrunA17_Chr8g0362081 | 98.956 | 479 | 5 | 0 | 5 | 483 | 19 | 497 | 0.0 | 986 |
| Msa1196490 | MtrunA17_Chr5g0416461 | 73.077 | 494 | 88 | 6 | 3 | 483 | 15 | 476 | 0.0 | 724 |
| Msa1196490 | MtrunA17_Chr4g0060541 | 62.803 | 371 | 135 | 2 | 116 | 483 | 10 | 380 | 2.82e-175 | 497 |
| Msa1196490 | MtrunA17_Chr4g0011151 | 62.323 | 353 | 132 | 1 | 131 | 483 | 97 | 448 | 5.57e-164 | 471 |
| Msa1196490 | MtrunA17_Chr4g0011171 | 62.040 | 353 | 133 | 1 | 131 | 483 | 97 | 448 | 8.41e-163 | 468 |
| Msa1196490 | MtrunA17_Chr4g0011161 | 61.473 | 353 | 135 | 1 | 131 | 483 | 97 | 448 | 1.99e-162 | 467 |
| Msa1196490 | MtrunA17_Chr4g0011221 | 62.323 | 353 | 132 | 1 | 131 | 483 | 97 | 448 | 2.82e-162 | 466 |
| Msa1196490 | MtrunA17_Chr4g0010131 | 60.833 | 360 | 134 | 2 | 124 | 483 | 59 | 411 | 7.09e-161 | 461 |
| Msa1196490 | MtrunA17_Chr4g0010161 | 60.169 | 354 | 140 | 1 | 130 | 483 | 62 | 414 | 1.91e-154 | 445 |
| Msa1196490 | MtrunA17_Chr2g0326541 | 51.130 | 354 | 160 | 4 | 135 | 483 | 19 | 364 | 2.64e-117 | 348 |
| Msa1196490 | MtrunA17_Chr4g0011191 | 64.486 | 214 | 76 | 0 | 131 | 344 | 97 | 310 | 3.25e-95 | 290 |
| Msa1196490 | MtrunA17_Chr7g0225551 | 36.031 | 383 | 217 | 10 | 108 | 481 | 38 | 401 | 2.89e-67 | 221 |
| Msa1196490 | MtrunA17_Chr6g0459491 | 37.466 | 363 | 193 | 8 | 137 | 481 | 57 | 403 | 2.66e-64 | 213 |
| Msa1196490 | MtrunA17_Chr4g0011201 | 62.281 | 114 | 43 | 0 | 370 | 483 | 10 | 123 | 3.93e-49 | 164 |
| Msa1196490 | MtrunA17_Chr3g0122681 | 27.306 | 271 | 168 | 8 | 110 | 359 | 5 | 267 | 1.74e-21 | 95.9 |
| Msa1196490 | MtrunA17_Chr8g0377241 | 26.531 | 245 | 155 | 6 | 132 | 359 | 47 | 283 | 2.59e-16 | 80.5 |
| Msa1196490 | MtrunA17_Chr4g0063531 | 25.649 | 308 | 200 | 10 | 112 | 408 | 44 | 333 | 2.73e-16 | 80.9 |
| Msa1196490 | MtrunA17_Chr3g0115401 | 24.642 | 349 | 187 | 12 | 136 | 415 | 43 | 384 | 3.80e-16 | 80.9 |
| Msa1196490 | MtrunA17_Chr8g0378511 | 26.056 | 284 | 182 | 9 | 136 | 408 | 77 | 343 | 7.15e-16 | 79.7 |
| Msa1196490 | MtrunA17_Chr4g0004201 | 22.255 | 337 | 220 | 7 | 136 | 446 | 5 | 325 | 1.08e-14 | 75.5 |
| Msa1196490 | MtrunA17_Chr2g0278921 | 24.148 | 352 | 189 | 10 | 132 | 412 | 39 | 383 | 1.11e-14 | 76.3 |
| Msa1196490 | MtrunA17_Chr7g0260051 | 21.605 | 324 | 207 | 7 | 134 | 440 | 2 | 295 | 1.17e-12 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1196490 | AT2G02870.2 | 68.702 | 393 | 115 | 5 | 96 | 483 | 78 | 467 | 0.0 | 553 |
| Msa1196490 | AT2G02870.3 | 68.702 | 393 | 115 | 5 | 96 | 483 | 78 | 467 | 0.0 | 553 |
| Msa1196490 | AT2G02870.1 | 68.702 | 393 | 115 | 5 | 96 | 483 | 78 | 467 | 0.0 | 553 |
| Msa1196490 | AT1G14330.1 | 69.841 | 378 | 108 | 3 | 109 | 483 | 67 | 441 | 0.0 | 541 |
| Msa1196490 | AT1G26930.1 | 67.935 | 368 | 115 | 1 | 119 | 483 | 54 | 421 | 0.0 | 525 |
| Msa1196490 | AT1G74510.2 | 65.169 | 356 | 115 | 2 | 137 | 483 | 96 | 451 | 4.44e-169 | 484 |
| Msa1196490 | AT1G74510.1 | 65.169 | 356 | 115 | 2 | 137 | 483 | 96 | 451 | 4.44e-169 | 484 |
| Msa1196490 | AT1G74510.3 | 65.169 | 356 | 115 | 2 | 137 | 483 | 96 | 451 | 4.44e-169 | 484 |
| Msa1196490 | AT1G26930.2 | 57.609 | 368 | 101 | 2 | 119 | 483 | 54 | 369 | 6.22e-147 | 425 |
| Msa1196490 | AT5G60570.2 | 47.297 | 370 | 180 | 6 | 120 | 483 | 33 | 393 | 1.17e-109 | 330 |
| Msa1196490 | AT5G60570.1 | 47.297 | 370 | 180 | 6 | 120 | 483 | 33 | 393 | 1.17e-109 | 330 |
| Msa1196490 | AT5G60570.3 | 47.297 | 370 | 180 | 6 | 120 | 483 | 33 | 393 | 1.17e-109 | 330 |
| Msa1196490 | AT3G27150.2 | 35.655 | 359 | 208 | 9 | 137 | 481 | 71 | 420 | 9.97e-64 | 213 |
| Msa1196490 | AT3G27150.1 | 35.655 | 359 | 208 | 9 | 137 | 481 | 71 | 420 | 9.97e-64 | 213 |
| Msa1196490 | AT5G40680.1 | 33.245 | 379 | 234 | 7 | 113 | 481 | 44 | 413 | 2.91e-59 | 201 |
| Msa1196490 | AT1G16250.2 | 24.024 | 333 | 219 | 8 | 131 | 440 | 3 | 324 | 5.34e-22 | 98.2 |
| Msa1196490 | AT1G16250.1 | 24.024 | 333 | 219 | 8 | 131 | 440 | 3 | 324 | 5.34e-22 | 98.2 |
| Msa1196490 | AT1G67480.3 | 28.151 | 238 | 152 | 5 | 136 | 359 | 39 | 271 | 1.17e-20 | 94.0 |
| Msa1196490 | AT1G67480.1 | 28.151 | 238 | 152 | 5 | 136 | 359 | 39 | 271 | 1.17e-20 | 94.0 |
| Msa1196490 | AT1G67480.2 | 28.151 | 238 | 152 | 5 | 136 | 359 | 39 | 271 | 1.17e-20 | 94.0 |
| Msa1196490 | AT1G15670.1 | 25.937 | 347 | 208 | 13 | 136 | 452 | 3 | 330 | 2.09e-17 | 84.0 |
| Msa1196490 | AT1G55270.1 | 25.352 | 284 | 184 | 10 | 136 | 408 | 78 | 344 | 1.07e-15 | 79.7 |
| Msa1196490 | AT1G80440.1 | 24.924 | 329 | 211 | 11 | 136 | 443 | 3 | 316 | 1.08e-13 | 72.8 |
| Msa1196490 | AT3G63220.1 | 23.832 | 214 | 145 | 4 | 134 | 330 | 2 | 214 | 2.38e-13 | 71.6 |
| Msa1196490 | AT3G63220.3 | 23.832 | 214 | 145 | 4 | 134 | 330 | 9 | 221 | 2.66e-13 | 71.6 |
| Msa1196490 | AT3G63220.2 | 23.832 | 214 | 145 | 4 | 134 | 330 | 9 | 221 | 2.66e-13 | 71.6 |
Find 137 sgRNAs with CRISPR-Local
Find 372 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGAAATTCATGCCGGATT+TGG | 0.208968 | 8_1:-45827129 | Msa1196490:CDS |
| GGAGATAGGCTTATTGTTAT+TGG | 0.237398 | 8_1:-45825874 | Msa1196490:CDS |
| TTCCTGGGCTTGATCATGTT+TGG | 0.245172 | 8_1:+45826243 | None:intergenic |
| ACGGTTGGGGTCTTGCATTT+AGG | 0.270827 | 8_1:-45825903 | Msa1196490:CDS |
| TCCTGGGCTTGATCATGTTT+GGG | 0.274266 | 8_1:+45826244 | None:intergenic |
| CGGTTGGGGTCTTGCATTTA+GGG | 0.286736 | 8_1:-45825902 | Msa1196490:CDS |
| TGCATCCACCGTTCGCGAAT+TGG | 0.289308 | 8_1:+45826558 | None:intergenic |
| TTGACAAACTCGTGGGAATC+TGG | 0.303822 | 8_1:-45826411 | Msa1196490:CDS |
| GGTACCGAACTTCTTGTGTT+TGG | 0.310632 | 8_1:-45826474 | Msa1196490:CDS |
| CATTCGTTGGAAGCCATTCT+AGG | 0.330901 | 8_1:+45826531 | None:intergenic |
| ACGATAAAGGTAACAAAGTA+TGG | 0.334348 | 8_1:-45825966 | Msa1196490:CDS |
| CATTTAGGGCATGTGGAGAT+AGG | 0.347335 | 8_1:-45825888 | Msa1196490:CDS |
| GTACCGAACTTCTTGTGTTT+GGG | 0.354894 | 8_1:-45826473 | Msa1196490:CDS |
| CGATGTTCAAGGTCTGATTA+TGG | 0.355945 | 8_1:-45826717 | Msa1196490:CDS |
| CACAGCCGAGGAAGGTTAAC+AGG | 0.369130 | 8_1:-45827064 | Msa1196490:CDS |
| CCGTTCGCGAATTGGATCAT+AGG | 0.379832 | 8_1:+45826566 | None:intergenic |
| TGTTTCCCATGTTTGATTCT+CGG | 0.387447 | 8_1:+45826269 | None:intergenic |
| GCTTACAATTGGTAGATTAC+CGG | 0.406813 | 8_1:-45825944 | Msa1196490:CDS |
| CCTGTCTAAGCCGATGTTCA+AGG | 0.410507 | 8_1:-45826728 | Msa1196490:CDS |
| CAACGAATGCTTCATGTGTT+CGG | 0.415249 | 8_1:-45826517 | Msa1196490:CDS |
| CTACGTCCGGGTGACATGTT+AGG | 0.418769 | 8_1:+45826096 | None:intergenic |
| CAGAAGAAGCAGCTTGATGA+TGG | 0.421720 | 8_1:-45826864 | Msa1196490:CDS |
| AATCTCCTGTTAACCTTCCT+CGG | 0.429428 | 8_1:+45827059 | None:intergenic |
| AGGCAGAGGCAGAGAACAAT+TGG | 0.435851 | 8_1:-45827157 | Msa1196490:CDS |
| GATGTGCTCTGGGGTATTCA+TGG | 0.436117 | 8_1:-45826220 | Msa1196490:CDS |
| ATGCTTCATGTGTTCGGATA+AGG | 0.437733 | 8_1:-45826511 | Msa1196490:CDS |
| TTTCCTGTGCCCTCCTCGAA+TGG | 0.437962 | 8_1:-45826593 | Msa1196490:CDS |
| GTGGATGCATTTACCTAGAA+TGG | 0.438443 | 8_1:-45826544 | Msa1196490:CDS |
| TTCATCGACGCCGCTCTCTC+CGG | 0.439593 | 8_1:+45825925 | None:intergenic |
| TTCCTGTGCCCTCCTCGAAT+GGG | 0.440155 | 8_1:-45826592 | Msa1196490:CDS |
| GCAATTATAAACAAAGTTAC+CGG | 0.440298 | 8_1:+45825756 | None:intergenic |
| GGTGGTGCCTCGGCTGTGGC+AGG | 0.444795 | 8_1:+45826054 | None:intergenic |
| AGCGGCGTCGATGAACGGTT+GGG | 0.449670 | 8_1:-45825917 | Msa1196490:CDS |
| AAGCCCAGGAAGATGTGCTC+TGG | 0.455338 | 8_1:-45826231 | Msa1196490:CDS |
| ACACTTTGGCAATCATTCAA+TGG | 0.458613 | 8_1:+45826957 | None:intergenic |
| AGAGCTTCCGCAACATAATC+CGG | 0.467928 | 8_1:-45826674 | Msa1196490:CDS |
| TGTTTATAATTGCGCCGTGA+TGG | 0.469236 | 8_1:-45825746 | Msa1196490:CDS |
| CGATCCCCTAGCACTACGTC+CGG | 0.469340 | 8_1:+45826083 | None:intergenic |
| AACAAAGTATGGCTTACAAT+TGG | 0.470901 | 8_1:-45825955 | Msa1196490:CDS |
| TGTTGTTCCACAAATCGATC+TGG | 0.472284 | 8_1:-45827006 | Msa1196490:CDS |
| AGATTGGAATCTTGTTATCC+AGG | 0.482335 | 8_1:-45827041 | Msa1196490:CDS |
| GCAGAACCAAACAAGCATCT+TGG | 0.482493 | 8_1:+45826372 | None:intergenic |
| GAGGAAGGTTAACAGGAGAT+TGG | 0.488758 | 8_1:-45827057 | Msa1196490:CDS |
| CTGTTAACCTTCCTCGGCTG+TGG | 0.491315 | 8_1:+45827065 | None:intergenic |
| GAACAGAAGCAGCATCATGC+AGG | 0.492940 | 8_1:-45826807 | Msa1196490:CDS |
| GTTTATAATTGCGCCGTGAT+GGG | 0.493022 | 8_1:-45825745 | Msa1196490:CDS |
| AAACCCTCACCATGACTCCT+TGG | 0.496562 | 8_1:+45825847 | None:intergenic |
| TAGAGGTGGTGCCTCGGCTG+TGG | 0.497106 | 8_1:+45826050 | None:intergenic |
| AACGATAGAGCTCACCGCTC+CGG | 0.499104 | 8_1:+45826655 | None:intergenic |
| TGCTGCTTCTGTTCATCCGT+CGG | 0.504235 | 8_1:+45826816 | None:intergenic |
| AGCCCAGGAAGATGTGCTCT+GGG | 0.511106 | 8_1:-45826230 | Msa1196490:CDS |
| GATAGGCTTATTGTTATTGG+CGG | 0.511196 | 8_1:-45825871 | Msa1196490:CDS |
| GGTCTTGCATTTAGGGCATG+TGG | 0.511219 | 8_1:-45825895 | Msa1196490:CDS |
| GTCTTTCATGAAATTCATGC+CGG | 0.514207 | 8_1:-45827135 | Msa1196490:CDS |
| GAGCGGCGTCGATGAACGGT+TGG | 0.522706 | 8_1:-45825918 | Msa1196490:CDS |
| GCGGCGTCGATGAACGGTTG+GGG | 0.523734 | 8_1:-45825916 | Msa1196490:CDS |
| TCATCGTCCAGATCGATTTG+TGG | 0.524927 | 8_1:+45826999 | None:intergenic |
| TGTCACCCGGACGTAGTGCT+AGG | 0.526730 | 8_1:-45826089 | Msa1196490:CDS |
| CCGAACTTCTTGTGTTTGGG+AGG | 0.526756 | 8_1:-45826470 | Msa1196490:CDS |
| CATTGTGGAGGTCCTTCACT+AGG | 0.527917 | 8_1:+45825802 | None:intergenic |
| CTCACCGCAGGTAAGAAGCT+TGG | 0.528534 | 8_1:+45826155 | None:intergenic |
| GACTGTATCTGTATATAACA+TGG | 0.528568 | 8_1:+45826436 | None:intergenic |
| GTCACCCGGACGTAGTGCTA+GGG | 0.529802 | 8_1:-45826088 | Msa1196490:CDS |
| GATCATAGGCCTCCCATTCG+AGG | 0.531967 | 8_1:+45826580 | None:intergenic |
| AGAGAGATTGCAATTCTAGC+TGG | 0.532983 | 8_1:-45826342 | Msa1196490:CDS |
| CGCCGCTGATTATGCTGACA+TGG | 0.534149 | 8_1:-45826001 | Msa1196490:CDS |
| ACCCCAGAGCACATCTTCCT+GGG | 0.535814 | 8_1:+45826228 | None:intergenic |
| ATCTTGTTATCCAGGTGAGA+TGG | 0.536188 | 8_1:-45827033 | Msa1196490:CDS |
| CCTCCCAAACACAAGAAGTT+CGG | 0.539106 | 8_1:+45826470 | None:intergenic |
| TTCATCCGTCGGCTCGTCAG+TGG | 0.539654 | 8_1:+45826827 | None:intergenic |
| CCTTGAACATCGGCTTAGAC+AGG | 0.541539 | 8_1:+45826728 | None:intergenic |
| CTACTTGCTAGAAAACAATC+CGG | 0.542893 | 8_1:-45825775 | Msa1196490:CDS |
| AGCTACTAGAGGTGGTGCCT+CGG | 0.556190 | 8_1:+45826044 | None:intergenic |
| CGAACTTCTTGTGTTTGGGA+GGG | 0.560794 | 8_1:-45826469 | Msa1196490:CDS |
| TATCGTTGGAGGAGACTGAA+TGG | 0.561469 | 8_1:-45826639 | Msa1196490:CDS |
| TGGTAGATTACCGGAGAGAG+CGG | 0.564163 | 8_1:-45825935 | Msa1196490:CDS |
| CGAACACATGAAGCATTCGT+TGG | 0.566259 | 8_1:+45826518 | None:intergenic |
| TATAGAGTTCAGCCGAGTCA+AGG | 0.570302 | 8_1:+45826295 | None:intergenic |
| TAATTCCACTGACGAGCCGA+CGG | 0.571828 | 8_1:-45826832 | Msa1196490:CDS |
| GAGAGAGCGGCGTCGATGAA+CGG | 0.573082 | 8_1:-45825922 | Msa1196490:CDS |
| GATAAGGAGTCTTTAGCGGT+AGG | 0.574089 | 8_1:-45826495 | Msa1196490:CDS |
| CTGTGCCCTCCTCGAATGGG+AGG | 0.576298 | 8_1:-45826589 | Msa1196490:CDS |
| TTCGGATAAGGAGTCTTTAG+CGG | 0.577829 | 8_1:-45826499 | Msa1196490:CDS |
| ATGATCCAATTCGCGAACGG+TGG | 0.578353 | 8_1:-45826563 | Msa1196490:CDS |
| TGCTCTGGGGTATTCATGGA+TGG | 0.578417 | 8_1:-45826216 | Msa1196490:CDS |
| CTGGCGGTTGTGATTCAGAT+GGG | 0.580234 | 8_1:-45826323 | Msa1196490:CDS |
| AACAGAAGCAGCATCATGCA+GGG | 0.580432 | 8_1:-45826806 | Msa1196490:CDS |
| GCTGGCGGTTGTGATTCAGA+TGG | 0.581902 | 8_1:-45826324 | Msa1196490:CDS |
| GGAAATGCCTGCCACAGCCG+AGG | 0.587924 | 8_1:-45826061 | Msa1196490:CDS |
| GCGGTGAGCTCTATCGTTGG+AGG | 0.589305 | 8_1:-45826650 | Msa1196490:CDS |
| ATTGGCGGACCAAGGAGTCA+TGG | 0.596488 | 8_1:-45825856 | Msa1196490:CDS |
| TGAATGGTATCATAGAGCAC+TGG | 0.597194 | 8_1:-45826623 | Msa1196490:CDS |
| ACAACAGAATCCATCTCACC+TGG | 0.602832 | 8_1:+45827023 | None:intergenic |
| CATAATCAGACCTTGAACAT+CGG | 0.607165 | 8_1:+45826718 | None:intergenic |
| TCCCAAACATGATCAAGCCC+AGG | 0.608139 | 8_1:-45826245 | Msa1196490:CDS |
| AGAAGAAGCAGCTTGATGAT+GGG | 0.610932 | 8_1:-45826863 | Msa1196490:CDS |
| CACCGCTCCGGATTATGTTG+CGG | 0.613767 | 8_1:+45826667 | None:intergenic |
| AGATGAACCACAGCCGAGGA+AGG | 0.615816 | 8_1:-45827072 | Msa1196490:CDS |
| ACTCGTGGGAATCTGGAATG+AGG | 0.616994 | 8_1:-45826404 | Msa1196490:CDS |
| AGATGGGCATATCCTTGACT+CGG | 0.619344 | 8_1:-45826307 | Msa1196490:CDS |
| GAGATTGCAATTCTAGCTGG+CGG | 0.619528 | 8_1:-45826339 | Msa1196490:CDS |
| GATCCCCTAGCACTACGTCC+GGG | 0.621678 | 8_1:+45826084 | None:intergenic |
| TTATTTACAACAGCTACTAG+AGG | 0.621989 | 8_1:+45826033 | None:intergenic |
| AATTCATGGGTTCCTAGTGA+AGG | 0.624631 | 8_1:-45825814 | Msa1196490:CDS |
| TCGATCTGGACGATGATCAG+AGG | 0.625003 | 8_1:-45826992 | Msa1196490:CDS |
| AATTCTTCAGCATCCCATCA+CGG | 0.626137 | 8_1:+45825732 | None:intergenic |
| ACTGTATCTGTATATAACAT+GGG | 0.627241 | 8_1:+45826437 | None:intergenic |
| TTTACAACAGCTACTAGAGG+TGG | 0.628438 | 8_1:+45826036 | None:intergenic |
| TCTGGACGATGATCAGAGGA+AGG | 0.629175 | 8_1:-45826988 | Msa1196490:CDS |
| TCACCCGGACGTAGTGCTAG+GGG | 0.629489 | 8_1:-45826087 | Msa1196490:CDS |
| TTATTGTTATTGGCGGACCA+AGG | 0.631861 | 8_1:-45825864 | Msa1196490:CDS |
| CGGACCAAGGAGTCATGGTG+AGG | 0.631965 | 8_1:-45825851 | Msa1196490:CDS |
| TAAATTGTACTCCTCACCGC+AGG | 0.632793 | 8_1:+45826143 | None:intergenic |
| ATAACTCCGAGAATCAAACA+TGG | 0.632851 | 8_1:-45826275 | Msa1196490:CDS |
| ATGAAGATGAACCACAGCCG+AGG | 0.634971 | 8_1:-45827076 | Msa1196490:CDS |
| GCAAGTAGATTCCATTGTGG+AGG | 0.637868 | 8_1:+45825790 | None:intergenic |
| GGAGCGGTGAGCTCTATCGT+TGG | 0.640390 | 8_1:-45826653 | Msa1196490:CDS |
| GGACCAAGGAGTCATGGTGA+GGG | 0.644000 | 8_1:-45825850 | Msa1196490:CDS |
| ATTGAATGATTGCCAAAGTG+TGG | 0.647338 | 8_1:-45826955 | Msa1196490:CDS |
| CAAGCTTCTTACCTGCGGTG+AGG | 0.651811 | 8_1:-45826154 | Msa1196490:CDS |
| CGCTGATTATGCTGACATGG+AGG | 0.655991 | 8_1:-45825998 | Msa1196490:CDS |
| ATAGGCCTCCCATTCGAGGA+GGG | 0.657950 | 8_1:+45826584 | None:intergenic |
| CTCCATGTCAGCATAATCAG+CGG | 0.662179 | 8_1:+45825999 | None:intergenic |
| CCTATGATCCAATTCGCGAA+CGG | 0.662545 | 8_1:-45826566 | Msa1196490:CDS |
| GAAATTCCTAACATGTCACC+CGG | 0.665151 | 8_1:-45826102 | Msa1196490:CDS |
| TAACTCCGAGAATCAAACAT+GGG | 0.666523 | 8_1:-45826274 | Msa1196490:CDS |
| CTAGAATTGCAATCTCTCTG+AGG | 0.668609 | 8_1:+45826346 | None:intergenic |
| CTAGTGAAGGACCTCCACAA+TGG | 0.672606 | 8_1:-45825801 | Msa1196490:CDS |
| CATAGGCCTCCCATTCGAGG+AGG | 0.672969 | 8_1:+45826583 | None:intergenic |
| CTAGCAAGTAGATTCCATTG+TGG | 0.677748 | 8_1:+45825787 | None:intergenic |
| ACAATTTACAGACTAGAACA+TGG | 0.682806 | 8_1:-45826128 | Msa1196490:CDS |
| ACAGAAGCAGCATCATGCAG+GGG | 0.699667 | 8_1:-45826805 | Msa1196490:CDS |
| GAGCTGTCCCGATTCATGCG+CGG | 0.706639 | 8_1:+45826756 | None:intergenic |
| GCCCAGGAAGATGTGCTCTG+GGG | 0.715567 | 8_1:-45826229 | Msa1196490:CDS |
| TTCCGCAACATAATCCGGAG+CGG | 0.719088 | 8_1:-45826669 | Msa1196490:CDS |
| GATTCCAAGCTTCTTACCTG+CGG | 0.719900 | 8_1:-45826159 | Msa1196490:CDS |
| GCGGAAGCTCTGATTCAACG+AGG | 0.804652 | 8_1:+45826686 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATGTTAGATTTTTTTTTT+TGG | - | chr8_1:45825765-45825784 | Msa1196490:CDS | 10.0% |
| !!! | TTTTTTTTTAGTTTCTATAT+TGG | - | chr8_1:45825872-45825891 | Msa1196490:CDS | 10.0% |
| !!! | TTATGTTAGATTTTTTTTTT+TGG | - | chr8_1:45825765-45825784 | Msa1196490:CDS | 10.0% |
| !!! | TTTTTTTTTAGTTTCTATAT+TGG | - | chr8_1:45825872-45825891 | Msa1196490:CDS | 10.0% |
| !! | ATTGTGATTAAAATGATTAA+TGG | - | chr8_1:45825831-45825850 | Msa1196490:CDS | 15.0% |
| !! | TTGTGATTAAAATGATTAAT+GGG | - | chr8_1:45825832-45825851 | Msa1196490:CDS | 15.0% |
| !! | AATTCTTCTATGAAATTTAA+AGG | + | chr8_1:45826142-45826161 | None:intergenic | 15.0% |
| !! | ATTGTGATTAAAATGATTAA+TGG | - | chr8_1:45825831-45825850 | Msa1196490:CDS | 15.0% |
| !! | TTGTGATTAAAATGATTAAT+GGG | - | chr8_1:45825832-45825851 | Msa1196490:CDS | 15.0% |
| !! | AATTCTTCTATGAAATTTAA+AGG | + | chr8_1:45826142-45826161 | None:intergenic | 15.0% |
| !!! | TTAAAATGATTAATGGGTTT+TGG | - | chr8_1:45825838-45825857 | Msa1196490:CDS | 20.0% |
| !!! | TCATATAATTTGATTTTGCA+TGG | - | chr8_1:45826070-45826089 | Msa1196490:CDS | 20.0% |
| !!! | GATGGAAATTTTTATGTTAT+CGG | - | chr8_1:45827342-45827361 | Msa1196490:intron | 20.0% |
| !!! | ATGGAAATTTTTATGTTATC+GGG | - | chr8_1:45827343-45827362 | Msa1196490:intron | 20.0% |
| !!! | TTTTATTGAACTCAATTCAT+GGG | - | chr8_1:45827713-45827732 | Msa1196490:intron | 20.0% |
| !!! | TTAAAATGATTAATGGGTTT+TGG | - | chr8_1:45825838-45825857 | Msa1196490:CDS | 20.0% |
| !!! | TCATATAATTTGATTTTGCA+TGG | - | chr8_1:45826070-45826089 | Msa1196490:CDS | 20.0% |
| !!! | GATGGAAATTTTTATGTTAT+CGG | - | chr8_1:45827342-45827361 | Msa1196490:intron | 20.0% |
| !!! | ATGGAAATTTTTATGTTATC+GGG | - | chr8_1:45827343-45827362 | Msa1196490:intron | 20.0% |
| !!! | TTTTATTGAACTCAATTCAT+GGG | - | chr8_1:45827713-45827732 | Msa1196490:intron | 20.0% |
| ! | AAAGTGGCTTAACATAAATA+AGG | + | chr8_1:45826042-45826061 | None:intergenic | 25.0% |
| ! | TTATATGAACAGAATCAAAG+TGG | + | chr8_1:45826058-45826077 | None:intergenic | 25.0% |
| !!! | TTGATTTGTTTTGTTTCAAC+AGG | - | chr8_1:45826231-45826250 | Msa1196490:CDS | 25.0% |
| ! | ACTGTATCTGTATATAACAT+GGG | + | chr8_1:45827106-45827125 | None:intergenic | 25.0% |
| !! | TGGAAATTTTTATGTTATCG+GGG | - | chr8_1:45827344-45827363 | Msa1196490:intron | 25.0% |
| !!! | GTTTTATTGAACTCAATTCA+TGG | - | chr8_1:45827712-45827731 | Msa1196490:intron | 25.0% |
| ! | GCAATTATAAACAAAGTTAC+CGG | + | chr8_1:45827787-45827806 | None:intergenic | 25.0% |
| ! | AAAGTGGCTTAACATAAATA+AGG | + | chr8_1:45826042-45826061 | None:intergenic | 25.0% |
| ! | TTATATGAACAGAATCAAAG+TGG | + | chr8_1:45826058-45826077 | None:intergenic | 25.0% |
| !!! | TTGATTTGTTTTGTTTCAAC+AGG | - | chr8_1:45826231-45826250 | Msa1196490:CDS | 25.0% |
| ! | ACTGTATCTGTATATAACAT+GGG | + | chr8_1:45827106-45827125 | None:intergenic | 25.0% |
| !! | TGGAAATTTTTATGTTATCG+GGG | - | chr8_1:45827344-45827363 | Msa1196490:intron | 25.0% |
| !!! | GTTTTATTGAACTCAATTCA+TGG | - | chr8_1:45827712-45827731 | Msa1196490:intron | 25.0% |
| ! | GCAATTATAAACAAAGTTAC+CGG | + | chr8_1:45827787-45827806 | None:intergenic | 25.0% |
| AGTTTCTATATTGGAAATGC+TGG | - | chr8_1:45825881-45825900 | Msa1196490:CDS | 30.0% | |
| !!! | TTCATTTTGATTCCTTGAAC+TGG | - | chr8_1:45825905-45825924 | Msa1196490:CDS | 30.0% |
| ATTGAACAAATACCAGTTCA+AGG | + | chr8_1:45825920-45825939 | None:intergenic | 30.0% | |
| !! | TCTGTGATCTTGTATTTTTG+TGG | - | chr8_1:45826100-45826119 | Msa1196490:CDS | 30.0% |
| !!! | CCGTTTTTTATTTCCAAATC+CGG | + | chr8_1:45826427-45826446 | None:intergenic | 30.0% |
| CCGGATTTGGAAATAAAAAA+CGG | - | chr8_1:45826424-45826443 | Msa1196490:CDS | 30.0% | |
| GAAATAAAAAACGGTAAACG+AGG | - | chr8_1:45826433-45826452 | Msa1196490:CDS | 30.0% | |
| GACTGTATCTGTATATAACA+TGG | + | chr8_1:45827107-45827126 | None:intergenic | 30.0% | |
| ! | AATTTTCCAAGATGCTTGTT+TGG | - | chr8_1:45827162-45827181 | Msa1196490:intron | 30.0% |
| ! | GGAAATTTTTATGTTATCGG+GGG | - | chr8_1:45827345-45827364 | Msa1196490:intron | 30.0% |
| ACAATTTACAGACTAGAACA+TGG | - | chr8_1:45827412-45827431 | Msa1196490:intron | 30.0% | |
| TTATTTACAACAGCTACTAG+AGG | + | chr8_1:45827510-45827529 | None:intergenic | 30.0% | |
| ! | GAGGTTAAAAAGTACGATAA+AGG | - | chr8_1:45827561-45827580 | Msa1196490:intron | 30.0% |
| ACGATAAAGGTAACAAAGTA+TGG | - | chr8_1:45827574-45827593 | Msa1196490:intron | 30.0% | |
| AACAAAGTATGGCTTACAAT+TGG | - | chr8_1:45827585-45827604 | Msa1196490:intron | 30.0% | |
| AGTTTCTATATTGGAAATGC+TGG | - | chr8_1:45825881-45825900 | Msa1196490:CDS | 30.0% | |
| !!! | TTCATTTTGATTCCTTGAAC+TGG | - | chr8_1:45825905-45825924 | Msa1196490:CDS | 30.0% |
| ATTGAACAAATACCAGTTCA+AGG | + | chr8_1:45825920-45825939 | None:intergenic | 30.0% | |
| !! | TCTGTGATCTTGTATTTTTG+TGG | - | chr8_1:45826100-45826119 | Msa1196490:CDS | 30.0% |
| !!! | CCGTTTTTTATTTCCAAATC+CGG | + | chr8_1:45826427-45826446 | None:intergenic | 30.0% |
| CCGGATTTGGAAATAAAAAA+CGG | - | chr8_1:45826424-45826443 | Msa1196490:CDS | 30.0% | |
| GAAATAAAAAACGGTAAACG+AGG | - | chr8_1:45826433-45826452 | Msa1196490:CDS | 30.0% | |
| GACTGTATCTGTATATAACA+TGG | + | chr8_1:45827107-45827126 | None:intergenic | 30.0% | |
| ! | AATTTTCCAAGATGCTTGTT+TGG | - | chr8_1:45827162-45827181 | Msa1196490:intron | 30.0% |
| ! | GGAAATTTTTATGTTATCGG+GGG | - | chr8_1:45827345-45827364 | Msa1196490:intron | 30.0% |
| ACAATTTACAGACTAGAACA+TGG | - | chr8_1:45827412-45827431 | Msa1196490:intron | 30.0% | |
| TTATTTACAACAGCTACTAG+AGG | + | chr8_1:45827510-45827529 | None:intergenic | 30.0% | |
| ! | GAGGTTAAAAAGTACGATAA+AGG | - | chr8_1:45827561-45827580 | Msa1196490:intron | 30.0% |
| ACGATAAAGGTAACAAAGTA+TGG | - | chr8_1:45827574-45827593 | Msa1196490:intron | 30.0% | |
| AACAAAGTATGGCTTACAAT+TGG | - | chr8_1:45827585-45827604 | Msa1196490:intron | 30.0% | |
| ! | TTTTGTGGTATTTGCGTTTC+TGG | - | chr8_1:45826115-45826134 | Msa1196490:CDS | 35.0% |
| TTTGTGGTATTTGCGTTTCT+GGG | - | chr8_1:45826116-45826135 | Msa1196490:CDS | 35.0% | |
| CAAGAACTAGAAAACAACCT+CGG | + | chr8_1:45826361-45826380 | None:intergenic | 35.0% | |
| !!! | GTTGTTTTCTAGTTCTTGTC+AGG | - | chr8_1:45826363-45826382 | Msa1196490:CDS | 35.0% |
| GTCTTTCATGAAATTCATGC+CGG | - | chr8_1:45826405-45826424 | Msa1196490:CDS | 35.0% | |
| ! | AGATTGGAATCTTGTTATCC+AGG | - | chr8_1:45826499-45826518 | Msa1196490:CDS | 35.0% |
| ACACTTTGGCAATCATTCAA+TGG | + | chr8_1:45826586-45826605 | None:intergenic | 35.0% | |
| ATTGAATGATTGCCAAAGTG+TGG | - | chr8_1:45826585-45826604 | Msa1196490:CDS | 35.0% | |
| ! | CAACAACATTTTCCACACTT+TGG | + | chr8_1:45826600-45826619 | None:intergenic | 35.0% |
| !!! | TGCTTTTTCTGTCCTGTTTT+TGG | - | chr8_1:45826618-45826637 | Msa1196490:CDS | 35.0% |
| CATAATCAGACCTTGAACAT+CGG | + | chr8_1:45826825-45826844 | None:intergenic | 35.0% | |
| ATAACTCCGAGAATCAAACA+TGG | - | chr8_1:45827265-45827284 | Msa1196490:intron | 35.0% | |
| TAACTCCGAGAATCAAACAT+GGG | - | chr8_1:45827266-45827285 | Msa1196490:intron | 35.0% | |
| TGTTTCCCATGTTTGATTCT+CGG | + | chr8_1:45827274-45827293 | None:intergenic | 35.0% | |
| ! | TTTTATGTTATCGGGGGAAT+CGG | - | chr8_1:45827351-45827370 | Msa1196490:intron | 35.0% |
| GCTTACAATTGGTAGATTAC+CGG | - | chr8_1:45827596-45827615 | Msa1196490:intron | 35.0% | |
| GGAGATAGGCTTATTGTTAT+TGG | - | chr8_1:45827666-45827685 | Msa1196490:intron | 35.0% | |
| ! | GATAGGCTTATTGTTATTGG+CGG | - | chr8_1:45827669-45827688 | Msa1196490:intron | 35.0% |
| ! | CTACTTGCTAGAAAACAATC+CGG | - | chr8_1:45827765-45827784 | Msa1196490:intron | 35.0% |
| ! | TTTTGTGGTATTTGCGTTTC+TGG | - | chr8_1:45826115-45826134 | Msa1196490:CDS | 35.0% |
| TTTGTGGTATTTGCGTTTCT+GGG | - | chr8_1:45826116-45826135 | Msa1196490:CDS | 35.0% | |
| CAAGAACTAGAAAACAACCT+CGG | + | chr8_1:45826361-45826380 | None:intergenic | 35.0% | |
| !!! | GTTGTTTTCTAGTTCTTGTC+AGG | - | chr8_1:45826363-45826382 | Msa1196490:CDS | 35.0% |
| GTCTTTCATGAAATTCATGC+CGG | - | chr8_1:45826405-45826424 | Msa1196490:CDS | 35.0% | |
| ! | AGATTGGAATCTTGTTATCC+AGG | - | chr8_1:45826499-45826518 | Msa1196490:CDS | 35.0% |
| ACACTTTGGCAATCATTCAA+TGG | + | chr8_1:45826586-45826605 | None:intergenic | 35.0% | |
| ATTGAATGATTGCCAAAGTG+TGG | - | chr8_1:45826585-45826604 | Msa1196490:CDS | 35.0% | |
| ! | CAACAACATTTTCCACACTT+TGG | + | chr8_1:45826600-45826619 | None:intergenic | 35.0% |
| !!! | TGCTTTTTCTGTCCTGTTTT+TGG | - | chr8_1:45826618-45826637 | Msa1196490:CDS | 35.0% |
| CATAATCAGACCTTGAACAT+CGG | + | chr8_1:45826825-45826844 | None:intergenic | 35.0% | |
| ATAACTCCGAGAATCAAACA+TGG | - | chr8_1:45827265-45827284 | Msa1196490:intron | 35.0% | |
| TAACTCCGAGAATCAAACAT+GGG | - | chr8_1:45827266-45827285 | Msa1196490:intron | 35.0% | |
| TGTTTCCCATGTTTGATTCT+CGG | + | chr8_1:45827274-45827293 | None:intergenic | 35.0% | |
| ! | TTTTATGTTATCGGGGGAAT+CGG | - | chr8_1:45827351-45827370 | Msa1196490:intron | 35.0% |
| GCTTACAATTGGTAGATTAC+CGG | - | chr8_1:45827596-45827615 | Msa1196490:intron | 35.0% | |
| GGAGATAGGCTTATTGTTAT+TGG | - | chr8_1:45827666-45827685 | Msa1196490:intron | 35.0% | |
| ! | GATAGGCTTATTGTTATTGG+CGG | - | chr8_1:45827669-45827688 | Msa1196490:intron | 35.0% |
| ! | CTACTTGCTAGAAAACAATC+CGG | - | chr8_1:45827765-45827784 | Msa1196490:intron | 35.0% |
| ! | TTCATCTCTGTGCTGTTGAT+TGG | - | chr8_1:45826277-45826296 | Msa1196490:CDS | 40.0% |
| TGTTGCTGCAAAGACTATGT+TGG | - | chr8_1:45826315-45826334 | Msa1196490:CDS | 40.0% | |
| CATGAAATTCATGCCGGATT+TGG | - | chr8_1:45826411-45826430 | Msa1196490:CDS | 40.0% | |
| AATCTCCTGTTAACCTTCCT+CGG | + | chr8_1:45826484-45826503 | None:intergenic | 40.0% | |
| ! | ATCTTGTTATCCAGGTGAGA+TGG | - | chr8_1:45826507-45826526 | Msa1196490:CDS | 40.0% |
| TGTTGTTCCACAAATCGATC+TGG | - | chr8_1:45826534-45826553 | Msa1196490:CDS | 40.0% | |
| !! | GCGATTTTTCAGCCAAAAAC+AGG | + | chr8_1:45826633-45826652 | None:intergenic | 40.0% |
| GAAAAATCGCAGCATTCGTT+CGG | - | chr8_1:45826643-45826662 | Msa1196490:CDS | 40.0% | |
| ! | AGAAGAAGCAGCTTGATGAT+GGG | - | chr8_1:45826677-45826696 | Msa1196490:CDS | 40.0% |
| CGATGTTCAAGGTCTGATTA+TGG | - | chr8_1:45826823-45826842 | Msa1196490:CDS | 40.0% | |
| TGAATGGTATCATAGAGCAC+TGG | - | chr8_1:45826917-45826936 | Msa1196490:CDS | 40.0% | |
| GTGGATGCATTTACCTAGAA+TGG | - | chr8_1:45826996-45827015 | Msa1196490:CDS | 40.0% | |
| CAACGAATGCTTCATGTGTT+CGG | - | chr8_1:45827023-45827042 | Msa1196490:CDS | 40.0% | |
| ATGCTTCATGTGTTCGGATA+AGG | - | chr8_1:45827029-45827048 | Msa1196490:CDS | 40.0% | |
| TTCGGATAAGGAGTCTTTAG+CGG | - | chr8_1:45827041-45827060 | Msa1196490:CDS | 40.0% | |
| GTACCGAACTTCTTGTGTTT+GGG | - | chr8_1:45827067-45827086 | Msa1196490:CDS | 40.0% | |
| ! | ACAGTCTTTTGACAAACTCG+TGG | - | chr8_1:45827121-45827140 | Msa1196490:CDS | 40.0% |
| ! | CAGTCTTTTGACAAACTCGT+GGG | - | chr8_1:45827122-45827141 | Msa1196490:CDS | 40.0% |
| CTAGAATTGCAATCTCTCTG+AGG | + | chr8_1:45827197-45827216 | None:intergenic | 40.0% | |
| AGAGAGATTGCAATTCTAGC+TGG | - | chr8_1:45827198-45827217 | Msa1196490:intron | 40.0% | |
| GAAATTCCTAACATGTCACC+CGG | - | chr8_1:45827438-45827457 | Msa1196490:intron | 40.0% | |
| TTTACAACAGCTACTAGAGG+TGG | + | chr8_1:45827507-45827526 | None:intergenic | 40.0% | |
| ! | TTATTGTTATTGGCGGACCA+AGG | - | chr8_1:45827676-45827695 | Msa1196490:intron | 40.0% |
| AATTCATGGGTTCCTAGTGA+AGG | - | chr8_1:45827726-45827745 | Msa1196490:intron | 40.0% | |
| CTAGCAAGTAGATTCCATTG+TGG | + | chr8_1:45827756-45827775 | None:intergenic | 40.0% | |
| TGTTTATAATTGCGCCGTGA+TGG | - | chr8_1:45827794-45827813 | Msa1196490:intron | 40.0% | |
| GTTTATAATTGCGCCGTGAT+GGG | - | chr8_1:45827795-45827814 | Msa1196490:intron | 40.0% | |
| ! | TTCATCTCTGTGCTGTTGAT+TGG | - | chr8_1:45826277-45826296 | Msa1196490:CDS | 40.0% |
| TGTTGCTGCAAAGACTATGT+TGG | - | chr8_1:45826315-45826334 | Msa1196490:CDS | 40.0% | |
| CATGAAATTCATGCCGGATT+TGG | - | chr8_1:45826411-45826430 | Msa1196490:CDS | 40.0% | |
| AATCTCCTGTTAACCTTCCT+CGG | + | chr8_1:45826484-45826503 | None:intergenic | 40.0% | |
| ! | ATCTTGTTATCCAGGTGAGA+TGG | - | chr8_1:45826507-45826526 | Msa1196490:CDS | 40.0% |
| TGTTGTTCCACAAATCGATC+TGG | - | chr8_1:45826534-45826553 | Msa1196490:CDS | 40.0% | |
| !! | GCGATTTTTCAGCCAAAAAC+AGG | + | chr8_1:45826633-45826652 | None:intergenic | 40.0% |
| GAAAAATCGCAGCATTCGTT+CGG | - | chr8_1:45826643-45826662 | Msa1196490:CDS | 40.0% | |
| ! | AGAAGAAGCAGCTTGATGAT+GGG | - | chr8_1:45826677-45826696 | Msa1196490:CDS | 40.0% |
| CGATGTTCAAGGTCTGATTA+TGG | - | chr8_1:45826823-45826842 | Msa1196490:CDS | 40.0% | |
| TGAATGGTATCATAGAGCAC+TGG | - | chr8_1:45826917-45826936 | Msa1196490:CDS | 40.0% | |
| GTGGATGCATTTACCTAGAA+TGG | - | chr8_1:45826996-45827015 | Msa1196490:CDS | 40.0% | |
| CAACGAATGCTTCATGTGTT+CGG | - | chr8_1:45827023-45827042 | Msa1196490:CDS | 40.0% | |
| ATGCTTCATGTGTTCGGATA+AGG | - | chr8_1:45827029-45827048 | Msa1196490:CDS | 40.0% | |
| TTCGGATAAGGAGTCTTTAG+CGG | - | chr8_1:45827041-45827060 | Msa1196490:CDS | 40.0% | |
| GTACCGAACTTCTTGTGTTT+GGG | - | chr8_1:45827067-45827086 | Msa1196490:CDS | 40.0% | |
| ! | ACAGTCTTTTGACAAACTCG+TGG | - | chr8_1:45827121-45827140 | Msa1196490:CDS | 40.0% |
| ! | CAGTCTTTTGACAAACTCGT+GGG | - | chr8_1:45827122-45827141 | Msa1196490:CDS | 40.0% |
| CTAGAATTGCAATCTCTCTG+AGG | + | chr8_1:45827197-45827216 | None:intergenic | 40.0% | |
| AGAGAGATTGCAATTCTAGC+TGG | - | chr8_1:45827198-45827217 | Msa1196490:intron | 40.0% | |
| GAAATTCCTAACATGTCACC+CGG | - | chr8_1:45827438-45827457 | Msa1196490:intron | 40.0% | |
| TTTACAACAGCTACTAGAGG+TGG | + | chr8_1:45827507-45827526 | None:intergenic | 40.0% | |
| ! | TTATTGTTATTGGCGGACCA+AGG | - | chr8_1:45827676-45827695 | Msa1196490:intron | 40.0% |
| AATTCATGGGTTCCTAGTGA+AGG | - | chr8_1:45827726-45827745 | Msa1196490:intron | 40.0% | |
| CTAGCAAGTAGATTCCATTG+TGG | + | chr8_1:45827756-45827775 | None:intergenic | 40.0% | |
| TGTTTATAATTGCGCCGTGA+TGG | - | chr8_1:45827794-45827813 | Msa1196490:intron | 40.0% | |
| GTTTATAATTGCGCCGTGAT+GGG | - | chr8_1:45827795-45827814 | Msa1196490:intron | 40.0% | |
| GCTGCAAAGACTATGTTGGA+AGG | - | chr8_1:45826319-45826338 | Msa1196490:CDS | 45.0% | |
| !! | TTCTAGTTCTTGTCAGGCAG+AGG | - | chr8_1:45826369-45826388 | Msa1196490:CDS | 45.0% |
| GAGGAAGGTTAACAGGAGAT+TGG | - | chr8_1:45826483-45826502 | Msa1196490:CDS | 45.0% | |
| ACAACAGAATCCATCTCACC+TGG | + | chr8_1:45826520-45826539 | None:intergenic | 45.0% | |
| !! | TCATCGTCCAGATCGATTTG+TGG | + | chr8_1:45826544-45826563 | None:intergenic | 45.0% |
| CAGAAGAAGCAGCTTGATGA+TGG | - | chr8_1:45826676-45826695 | Msa1196490:CDS | 45.0% | |
| AACAGAAGCAGCATCATGCA+GGG | - | chr8_1:45826734-45826753 | Msa1196490:CDS | 45.0% | |
| AGAGCTTCCGCAACATAATC+CGG | - | chr8_1:45826866-45826885 | Msa1196490:CDS | 45.0% | |
| TATCGTTGGAGGAGACTGAA+TGG | - | chr8_1:45826901-45826920 | Msa1196490:CDS | 45.0% | |
| CCTATGATCCAATTCGCGAA+CGG | - | chr8_1:45826974-45826993 | Msa1196490:CDS | 45.0% | |
| CATTCGTTGGAAGCCATTCT+AGG | + | chr8_1:45827012-45827031 | None:intergenic | 45.0% | |
| ! | CGAACACATGAAGCATTCGT+TGG | + | chr8_1:45827025-45827044 | None:intergenic | 45.0% |
| GATAAGGAGTCTTTAGCGGT+AGG | - | chr8_1:45827045-45827064 | Msa1196490:CDS | 45.0% | |
| ! | GGTACCGAACTTCTTGTGTT+TGG | - | chr8_1:45827066-45827085 | Msa1196490:CDS | 45.0% |
| CCTCCCAAACACAAGAAGTT+CGG | + | chr8_1:45827073-45827092 | None:intergenic | 45.0% | |
| CGAACTTCTTGTGTTTGGGA+GGG | - | chr8_1:45827071-45827090 | Msa1196490:CDS | 45.0% | |
| TTGACAAACTCGTGGGAATC+TGG | - | chr8_1:45827129-45827148 | Msa1196490:CDS | 45.0% | |
| GCAGAACCAAACAAGCATCT+TGG | + | chr8_1:45827171-45827190 | None:intergenic | 45.0% | |
| ! | GAGATTGCAATTCTAGCTGG+CGG | - | chr8_1:45827201-45827220 | Msa1196490:intron | 45.0% |
| AGATGGGCATATCCTTGACT+CGG | - | chr8_1:45827233-45827252 | Msa1196490:intron | 45.0% | |
| TATAGAGTTCAGCCGAGTCA+AGG | + | chr8_1:45827248-45827267 | None:intergenic | 45.0% | |
| TCCTGGGCTTGATCATGTTT+GGG | + | chr8_1:45827299-45827318 | None:intergenic | 45.0% | |
| TTCCTGGGCTTGATCATGTT+TGG | + | chr8_1:45827300-45827319 | None:intergenic | 45.0% | |
| GATTCCAAGCTTCTTACCTG+CGG | - | chr8_1:45827381-45827400 | Msa1196490:intron | 45.0% | |
| TAAATTGTACTCCTCACCGC+AGG | + | chr8_1:45827400-45827419 | None:intergenic | 45.0% | |
| CTCCATGTCAGCATAATCAG+CGG | + | chr8_1:45827544-45827563 | None:intergenic | 45.0% | |
| ! | CATTTAGGGCATGTGGAGAT+AGG | - | chr8_1:45827652-45827671 | Msa1196490:intron | 45.0% |
| GCAAGTAGATTCCATTGTGG+AGG | + | chr8_1:45827753-45827772 | None:intergenic | 45.0% | |
| GCTGCAAAGACTATGTTGGA+AGG | - | chr8_1:45826319-45826338 | Msa1196490:CDS | 45.0% | |
| !! | TTCTAGTTCTTGTCAGGCAG+AGG | - | chr8_1:45826369-45826388 | Msa1196490:CDS | 45.0% |
| GAGGAAGGTTAACAGGAGAT+TGG | - | chr8_1:45826483-45826502 | Msa1196490:CDS | 45.0% | |
| ACAACAGAATCCATCTCACC+TGG | + | chr8_1:45826520-45826539 | None:intergenic | 45.0% | |
| !! | TCATCGTCCAGATCGATTTG+TGG | + | chr8_1:45826544-45826563 | None:intergenic | 45.0% |
| CAGAAGAAGCAGCTTGATGA+TGG | - | chr8_1:45826676-45826695 | Msa1196490:CDS | 45.0% | |
| AACAGAAGCAGCATCATGCA+GGG | - | chr8_1:45826734-45826753 | Msa1196490:CDS | 45.0% | |
| AGAGCTTCCGCAACATAATC+CGG | - | chr8_1:45826866-45826885 | Msa1196490:CDS | 45.0% | |
| TATCGTTGGAGGAGACTGAA+TGG | - | chr8_1:45826901-45826920 | Msa1196490:CDS | 45.0% | |
| CCTATGATCCAATTCGCGAA+CGG | - | chr8_1:45826974-45826993 | Msa1196490:CDS | 45.0% | |
| CATTCGTTGGAAGCCATTCT+AGG | + | chr8_1:45827012-45827031 | None:intergenic | 45.0% | |
| ! | CGAACACATGAAGCATTCGT+TGG | + | chr8_1:45827025-45827044 | None:intergenic | 45.0% |
| GATAAGGAGTCTTTAGCGGT+AGG | - | chr8_1:45827045-45827064 | Msa1196490:CDS | 45.0% | |
| ! | GGTACCGAACTTCTTGTGTT+TGG | - | chr8_1:45827066-45827085 | Msa1196490:CDS | 45.0% |
| CCTCCCAAACACAAGAAGTT+CGG | + | chr8_1:45827073-45827092 | None:intergenic | 45.0% | |
| CGAACTTCTTGTGTTTGGGA+GGG | - | chr8_1:45827071-45827090 | Msa1196490:CDS | 45.0% | |
| TTGACAAACTCGTGGGAATC+TGG | - | chr8_1:45827129-45827148 | Msa1196490:CDS | 45.0% | |
| GCAGAACCAAACAAGCATCT+TGG | + | chr8_1:45827171-45827190 | None:intergenic | 45.0% | |
| ! | GAGATTGCAATTCTAGCTGG+CGG | - | chr8_1:45827201-45827220 | Msa1196490:intron | 45.0% |
| AGATGGGCATATCCTTGACT+CGG | - | chr8_1:45827233-45827252 | Msa1196490:intron | 45.0% | |
| TATAGAGTTCAGCCGAGTCA+AGG | + | chr8_1:45827248-45827267 | None:intergenic | 45.0% | |
| TCCTGGGCTTGATCATGTTT+GGG | + | chr8_1:45827299-45827318 | None:intergenic | 45.0% | |
| TTCCTGGGCTTGATCATGTT+TGG | + | chr8_1:45827300-45827319 | None:intergenic | 45.0% | |
| GATTCCAAGCTTCTTACCTG+CGG | - | chr8_1:45827381-45827400 | Msa1196490:intron | 45.0% | |
| TAAATTGTACTCCTCACCGC+AGG | + | chr8_1:45827400-45827419 | None:intergenic | 45.0% | |
| CTCCATGTCAGCATAATCAG+CGG | + | chr8_1:45827544-45827563 | None:intergenic | 45.0% | |
| ! | CATTTAGGGCATGTGGAGAT+AGG | - | chr8_1:45827652-45827671 | Msa1196490:intron | 45.0% |
| GCAAGTAGATTCCATTGTGG+AGG | + | chr8_1:45827753-45827772 | None:intergenic | 45.0% | |
| !! | AAAAATATATATATATAGTA+AGG | + | chr8_1:45825946-45825965 | None:intergenic | 5.0% |
| !! | AAAAATATATATATATAGTA+AGG | + | chr8_1:45825946-45825965 | None:intergenic | 5.0% |
| AAACAACCTCGGAACCAAGC+AGG | + | chr8_1:45826350-45826369 | None:intergenic | 50.0% | |
| AGGCAGAGGCAGAGAACAAT+TGG | - | chr8_1:45826383-45826402 | Msa1196490:CDS | 50.0% | |
| ATGAAGATGAACCACAGCCG+AGG | - | chr8_1:45826464-45826483 | Msa1196490:CDS | 50.0% | |
| TCGATCTGGACGATGATCAG+AGG | - | chr8_1:45826548-45826567 | Msa1196490:CDS | 50.0% | |
| TCTGGACGATGATCAGAGGA+AGG | - | chr8_1:45826552-45826571 | Msa1196490:CDS | 50.0% | |
| TAATTCCACTGACGAGCCGA+CGG | - | chr8_1:45826708-45826727 | Msa1196490:CDS | 50.0% | |
| ! | TGCTGCTTCTGTTCATCCGT+CGG | + | chr8_1:45826727-45826746 | None:intergenic | 50.0% |
| GAACAGAAGCAGCATCATGC+AGG | - | chr8_1:45826733-45826752 | Msa1196490:CDS | 50.0% | |
| ACAGAAGCAGCATCATGCAG+GGG | - | chr8_1:45826735-45826754 | Msa1196490:CDS | 50.0% | |
| ! | CACTTTTGCCGCGCATGAAT+CGG | - | chr8_1:45826776-45826795 | Msa1196490:CDS | 50.0% |
| ! | ACTTTTGCCGCGCATGAATC+GGG | - | chr8_1:45826777-45826796 | Msa1196490:CDS | 50.0% |
| !! | CCTTGAACATCGGCTTAGAC+AGG | + | chr8_1:45826815-45826834 | None:intergenic | 50.0% |
| CCTGTCTAAGCCGATGTTCA+AGG | - | chr8_1:45826812-45826831 | Msa1196490:CDS | 50.0% | |
| TTCCGCAACATAATCCGGAG+CGG | - | chr8_1:45826871-45826890 | Msa1196490:CDS | 50.0% | |
| CCGTTCGCGAATTGGATCAT+AGG | + | chr8_1:45826977-45826996 | None:intergenic | 50.0% | |
| ATGATCCAATTCGCGAACGG+TGG | - | chr8_1:45826977-45826996 | Msa1196490:CDS | 50.0% | |
| CCGAACTTCTTGTGTTTGGG+AGG | - | chr8_1:45827070-45827089 | Msa1196490:CDS | 50.0% | |
| ! | ACTCGTGGGAATCTGGAATG+AGG | - | chr8_1:45827136-45827155 | Msa1196490:CDS | 50.0% |
| CTGGCGGTTGTGATTCAGAT+GGG | - | chr8_1:45827217-45827236 | Msa1196490:intron | 50.0% | |
| TCCCAAACATGATCAAGCCC+AGG | - | chr8_1:45827295-45827314 | Msa1196490:intron | 50.0% | |
| !! | GATGTGCTCTGGGGTATTCA+TGG | - | chr8_1:45827320-45827339 | Msa1196490:intron | 50.0% |
| !! | TGCTCTGGGGTATTCATGGA+TGG | - | chr8_1:45827324-45827343 | Msa1196490:intron | 50.0% |
| TATGTTATCGGGGGAATCGG+TGG | - | chr8_1:45827354-45827373 | Msa1196490:intron | 50.0% | |
| ! | CGCTGATTATGCTGACATGG+AGG | - | chr8_1:45827542-45827561 | Msa1196490:intron | 50.0% |
| TGGTAGATTACCGGAGAGAG+CGG | - | chr8_1:45827605-45827624 | Msa1196490:intron | 50.0% | |
| ACGGTTGGGGTCTTGCATTT+AGG | - | chr8_1:45827637-45827656 | Msa1196490:intron | 50.0% | |
| CGGTTGGGGTCTTGCATTTA+GGG | - | chr8_1:45827638-45827657 | Msa1196490:intron | 50.0% | |
| ! | GGTCTTGCATTTAGGGCATG+TGG | - | chr8_1:45827645-45827664 | Msa1196490:intron | 50.0% |
| AAACCCTCACCATGACTCCT+TGG | + | chr8_1:45827696-45827715 | None:intergenic | 50.0% | |
| CATTGTGGAGGTCCTTCACT+AGG | + | chr8_1:45827741-45827760 | None:intergenic | 50.0% | |
| CTAGTGAAGGACCTCCACAA+TGG | - | chr8_1:45827739-45827758 | Msa1196490:intron | 50.0% | |
| AAACAACCTCGGAACCAAGC+AGG | + | chr8_1:45826350-45826369 | None:intergenic | 50.0% | |
| AGGCAGAGGCAGAGAACAAT+TGG | - | chr8_1:45826383-45826402 | Msa1196490:CDS | 50.0% | |
| ATGAAGATGAACCACAGCCG+AGG | - | chr8_1:45826464-45826483 | Msa1196490:CDS | 50.0% | |
| TCGATCTGGACGATGATCAG+AGG | - | chr8_1:45826548-45826567 | Msa1196490:CDS | 50.0% | |
| TCTGGACGATGATCAGAGGA+AGG | - | chr8_1:45826552-45826571 | Msa1196490:CDS | 50.0% | |
| TAATTCCACTGACGAGCCGA+CGG | - | chr8_1:45826708-45826727 | Msa1196490:CDS | 50.0% | |
| ! | TGCTGCTTCTGTTCATCCGT+CGG | + | chr8_1:45826727-45826746 | None:intergenic | 50.0% |
| GAACAGAAGCAGCATCATGC+AGG | - | chr8_1:45826733-45826752 | Msa1196490:CDS | 50.0% | |
| ACAGAAGCAGCATCATGCAG+GGG | - | chr8_1:45826735-45826754 | Msa1196490:CDS | 50.0% | |
| ! | CACTTTTGCCGCGCATGAAT+CGG | - | chr8_1:45826776-45826795 | Msa1196490:CDS | 50.0% |
| ! | ACTTTTGCCGCGCATGAATC+GGG | - | chr8_1:45826777-45826796 | Msa1196490:CDS | 50.0% |
| !! | CCTTGAACATCGGCTTAGAC+AGG | + | chr8_1:45826815-45826834 | None:intergenic | 50.0% |
| CCTGTCTAAGCCGATGTTCA+AGG | - | chr8_1:45826812-45826831 | Msa1196490:CDS | 50.0% | |
| TTCCGCAACATAATCCGGAG+CGG | - | chr8_1:45826871-45826890 | Msa1196490:CDS | 50.0% | |
| CCGTTCGCGAATTGGATCAT+AGG | + | chr8_1:45826977-45826996 | None:intergenic | 50.0% | |
| ATGATCCAATTCGCGAACGG+TGG | - | chr8_1:45826977-45826996 | Msa1196490:CDS | 50.0% | |
| CCGAACTTCTTGTGTTTGGG+AGG | - | chr8_1:45827070-45827089 | Msa1196490:CDS | 50.0% | |
| ! | ACTCGTGGGAATCTGGAATG+AGG | - | chr8_1:45827136-45827155 | Msa1196490:CDS | 50.0% |
| CTGGCGGTTGTGATTCAGAT+GGG | - | chr8_1:45827217-45827236 | Msa1196490:intron | 50.0% | |
| TCCCAAACATGATCAAGCCC+AGG | - | chr8_1:45827295-45827314 | Msa1196490:intron | 50.0% | |
| !! | GATGTGCTCTGGGGTATTCA+TGG | - | chr8_1:45827320-45827339 | Msa1196490:intron | 50.0% |
| !! | TGCTCTGGGGTATTCATGGA+TGG | - | chr8_1:45827324-45827343 | Msa1196490:intron | 50.0% |
| TATGTTATCGGGGGAATCGG+TGG | - | chr8_1:45827354-45827373 | Msa1196490:intron | 50.0% | |
| ! | CGCTGATTATGCTGACATGG+AGG | - | chr8_1:45827542-45827561 | Msa1196490:intron | 50.0% |
| TGGTAGATTACCGGAGAGAG+CGG | - | chr8_1:45827605-45827624 | Msa1196490:intron | 50.0% | |
| ACGGTTGGGGTCTTGCATTT+AGG | - | chr8_1:45827637-45827656 | Msa1196490:intron | 50.0% | |
| CGGTTGGGGTCTTGCATTTA+GGG | - | chr8_1:45827638-45827657 | Msa1196490:intron | 50.0% | |
| ! | GGTCTTGCATTTAGGGCATG+TGG | - | chr8_1:45827645-45827664 | Msa1196490:intron | 50.0% |
| AAACCCTCACCATGACTCCT+TGG | + | chr8_1:45827696-45827715 | None:intergenic | 50.0% | |
| CATTGTGGAGGTCCTTCACT+AGG | + | chr8_1:45827741-45827760 | None:intergenic | 50.0% | |
| CTAGTGAAGGACCTCCACAA+TGG | - | chr8_1:45827739-45827758 | Msa1196490:intron | 50.0% | |
| GTTGGAAGGTCGTTCCTGCT+TGG | - | chr8_1:45826333-45826352 | Msa1196490:CDS | 55.0% | |
| AGATGAACCACAGCCGAGGA+AGG | - | chr8_1:45826468-45826487 | Msa1196490:CDS | 55.0% | |
| CTGTTAACCTTCCTCGGCTG+TGG | + | chr8_1:45826478-45826497 | None:intergenic | 55.0% | |
| CACAGCCGAGGAAGGTTAAC+AGG | - | chr8_1:45826476-45826495 | Msa1196490:CDS | 55.0% | |
| ! | GCGGAAGCTCTGATTCAACG+AGG | + | chr8_1:45826857-45826876 | None:intergenic | 55.0% |
| CACCGCTCCGGATTATGTTG+CGG | + | chr8_1:45826876-45826895 | None:intergenic | 55.0% | |
| AACGATAGAGCTCACCGCTC+CGG | + | chr8_1:45826888-45826907 | None:intergenic | 55.0% | |
| TTTCCTGTGCCCTCCTCGAA+TGG | - | chr8_1:45826947-45826966 | Msa1196490:CDS | 55.0% | |
| TTCCTGTGCCCTCCTCGAAT+GGG | - | chr8_1:45826948-45826967 | Msa1196490:CDS | 55.0% | |
| ATAGGCCTCCCATTCGAGGA+GGG | + | chr8_1:45826959-45826978 | None:intergenic | 55.0% | |
| GATCATAGGCCTCCCATTCG+AGG | + | chr8_1:45826963-45826982 | None:intergenic | 55.0% | |
| TGCATCCACCGTTCGCGAAT+TGG | + | chr8_1:45826985-45827004 | None:intergenic | 55.0% | |
| GCTGGCGGTTGTGATTCAGA+TGG | - | chr8_1:45827216-45827235 | Msa1196490:intron | 55.0% | |
| AAGCCCAGGAAGATGTGCTC+TGG | - | chr8_1:45827309-45827328 | Msa1196490:intron | 55.0% | |
| AGCCCAGGAAGATGTGCTCT+GGG | - | chr8_1:45827310-45827329 | Msa1196490:intron | 55.0% | |
| ACCCCAGAGCACATCTTCCT+GGG | + | chr8_1:45827315-45827334 | None:intergenic | 55.0% | |
| TACCCCAGAGCACATCTTCC+TGG | + | chr8_1:45827316-45827335 | None:intergenic | 55.0% | |
| CTCACCGCAGGTAAGAAGCT+TGG | + | chr8_1:45827388-45827407 | None:intergenic | 55.0% | |
| CAAGCTTCTTACCTGCGGTG+AGG | - | chr8_1:45827386-45827405 | Msa1196490:intron | 55.0% | |
| CTACGTCCGGGTGACATGTT+AGG | + | chr8_1:45827447-45827466 | None:intergenic | 55.0% | |
| AGCTACTAGAGGTGGTGCCT+CGG | + | chr8_1:45827499-45827518 | None:intergenic | 55.0% | |
| ! | CGCCGCTGATTATGCTGACA+TGG | - | chr8_1:45827539-45827558 | Msa1196490:intron | 55.0% |
| ! | ATTGGCGGACCAAGGAGTCA+TGG | - | chr8_1:45827684-45827703 | Msa1196490:intron | 55.0% |
| GGACCAAGGAGTCATGGTGA+GGG | - | chr8_1:45827690-45827709 | Msa1196490:intron | 55.0% | |
| GTTGGAAGGTCGTTCCTGCT+TGG | - | chr8_1:45826333-45826352 | Msa1196490:CDS | 55.0% | |
| AGATGAACCACAGCCGAGGA+AGG | - | chr8_1:45826468-45826487 | Msa1196490:CDS | 55.0% | |
| CTGTTAACCTTCCTCGGCTG+TGG | + | chr8_1:45826478-45826497 | None:intergenic | 55.0% | |
| CACAGCCGAGGAAGGTTAAC+AGG | - | chr8_1:45826476-45826495 | Msa1196490:CDS | 55.0% | |
| ! | GCGGAAGCTCTGATTCAACG+AGG | + | chr8_1:45826857-45826876 | None:intergenic | 55.0% |
| CACCGCTCCGGATTATGTTG+CGG | + | chr8_1:45826876-45826895 | None:intergenic | 55.0% | |
| AACGATAGAGCTCACCGCTC+CGG | + | chr8_1:45826888-45826907 | None:intergenic | 55.0% | |
| TTTCCTGTGCCCTCCTCGAA+TGG | - | chr8_1:45826947-45826966 | Msa1196490:CDS | 55.0% | |
| TTCCTGTGCCCTCCTCGAAT+GGG | - | chr8_1:45826948-45826967 | Msa1196490:CDS | 55.0% | |
| ATAGGCCTCCCATTCGAGGA+GGG | + | chr8_1:45826959-45826978 | None:intergenic | 55.0% | |
| GATCATAGGCCTCCCATTCG+AGG | + | chr8_1:45826963-45826982 | None:intergenic | 55.0% | |
| TGCATCCACCGTTCGCGAAT+TGG | + | chr8_1:45826985-45827004 | None:intergenic | 55.0% | |
| GCTGGCGGTTGTGATTCAGA+TGG | - | chr8_1:45827216-45827235 | Msa1196490:intron | 55.0% | |
| AAGCCCAGGAAGATGTGCTC+TGG | - | chr8_1:45827309-45827328 | Msa1196490:intron | 55.0% | |
| AGCCCAGGAAGATGTGCTCT+GGG | - | chr8_1:45827310-45827329 | Msa1196490:intron | 55.0% | |
| ACCCCAGAGCACATCTTCCT+GGG | + | chr8_1:45827315-45827334 | None:intergenic | 55.0% | |
| TACCCCAGAGCACATCTTCC+TGG | + | chr8_1:45827316-45827335 | None:intergenic | 55.0% | |
| CTCACCGCAGGTAAGAAGCT+TGG | + | chr8_1:45827388-45827407 | None:intergenic | 55.0% | |
| CAAGCTTCTTACCTGCGGTG+AGG | - | chr8_1:45827386-45827405 | Msa1196490:intron | 55.0% | |
| CTACGTCCGGGTGACATGTT+AGG | + | chr8_1:45827447-45827466 | None:intergenic | 55.0% | |
| AGCTACTAGAGGTGGTGCCT+CGG | + | chr8_1:45827499-45827518 | None:intergenic | 55.0% | |
| ! | CGCCGCTGATTATGCTGACA+TGG | - | chr8_1:45827539-45827558 | Msa1196490:intron | 55.0% |
| ! | ATTGGCGGACCAAGGAGTCA+TGG | - | chr8_1:45827684-45827703 | Msa1196490:intron | 55.0% |
| GGACCAAGGAGTCATGGTGA+GGG | - | chr8_1:45827690-45827709 | Msa1196490:intron | 55.0% | |
| GTCGTTCCTGCTTGGTTCCG+AGG | - | chr8_1:45826341-45826360 | Msa1196490:CDS | 60.0% | |
| !! | TTCATCCGTCGGCTCGTCAG+TGG | + | chr8_1:45826716-45826735 | None:intergenic | 60.0% |
| GAGCTGTCCCGATTCATGCG+CGG | + | chr8_1:45826787-45826806 | None:intergenic | 60.0% | |
| GGAGCGGTGAGCTCTATCGT+TGG | - | chr8_1:45826887-45826906 | Msa1196490:CDS | 60.0% | |
| GCGGTGAGCTCTATCGTTGG+AGG | - | chr8_1:45826890-45826909 | Msa1196490:CDS | 60.0% | |
| CATAGGCCTCCCATTCGAGG+AGG | + | chr8_1:45826960-45826979 | None:intergenic | 60.0% | |
| GCCCAGGAAGATGTGCTCTG+GGG | - | chr8_1:45827311-45827330 | Msa1196490:intron | 60.0% | |
| TGTCACCCGGACGTAGTGCT+AGG | - | chr8_1:45827451-45827470 | Msa1196490:intron | 60.0% | |
| GTCACCCGGACGTAGTGCTA+GGG | - | chr8_1:45827452-45827471 | Msa1196490:intron | 60.0% | |
| TCACCCGGACGTAGTGCTAG+GGG | - | chr8_1:45827453-45827472 | Msa1196490:intron | 60.0% | |
| GATCCCCTAGCACTACGTCC+GGG | + | chr8_1:45827459-45827478 | None:intergenic | 60.0% | |
| CGATCCCCTAGCACTACGTC+CGG | + | chr8_1:45827460-45827479 | None:intergenic | 60.0% | |
| CGGACGTAGTGCTAGGGGAT+CGG | - | chr8_1:45827458-45827477 | Msa1196490:intron | 60.0% | |
| TTCATCGACGCCGCTCTCTC+CGG | + | chr8_1:45827618-45827637 | None:intergenic | 60.0% | |
| !! | GAGAGAGCGGCGTCGATGAA+CGG | - | chr8_1:45827618-45827637 | Msa1196490:intron | 60.0% |
| !! | AGCGGCGTCGATGAACGGTT+GGG | - | chr8_1:45827623-45827642 | Msa1196490:intron | 60.0% |
| CGGACCAAGGAGTCATGGTG+AGG | - | chr8_1:45827689-45827708 | Msa1196490:intron | 60.0% | |
| GTCGTTCCTGCTTGGTTCCG+AGG | - | chr8_1:45826341-45826360 | Msa1196490:CDS | 60.0% | |
| !! | TTCATCCGTCGGCTCGTCAG+TGG | + | chr8_1:45826716-45826735 | None:intergenic | 60.0% |
| GAGCTGTCCCGATTCATGCG+CGG | + | chr8_1:45826787-45826806 | None:intergenic | 60.0% | |
| GGAGCGGTGAGCTCTATCGT+TGG | - | chr8_1:45826887-45826906 | Msa1196490:CDS | 60.0% | |
| GCGGTGAGCTCTATCGTTGG+AGG | - | chr8_1:45826890-45826909 | Msa1196490:CDS | 60.0% | |
| CATAGGCCTCCCATTCGAGG+AGG | + | chr8_1:45826960-45826979 | None:intergenic | 60.0% | |
| GCCCAGGAAGATGTGCTCTG+GGG | - | chr8_1:45827311-45827330 | Msa1196490:intron | 60.0% | |
| TGTCACCCGGACGTAGTGCT+AGG | - | chr8_1:45827451-45827470 | Msa1196490:intron | 60.0% | |
| GTCACCCGGACGTAGTGCTA+GGG | - | chr8_1:45827452-45827471 | Msa1196490:intron | 60.0% | |
| TCACCCGGACGTAGTGCTAG+GGG | - | chr8_1:45827453-45827472 | Msa1196490:intron | 60.0% | |
| GATCCCCTAGCACTACGTCC+GGG | + | chr8_1:45827459-45827478 | None:intergenic | 60.0% | |
| CGATCCCCTAGCACTACGTC+CGG | + | chr8_1:45827460-45827479 | None:intergenic | 60.0% | |
| CGGACGTAGTGCTAGGGGAT+CGG | - | chr8_1:45827458-45827477 | Msa1196490:intron | 60.0% | |
| TTCATCGACGCCGCTCTCTC+CGG | + | chr8_1:45827618-45827637 | None:intergenic | 60.0% | |
| !! | GAGAGAGCGGCGTCGATGAA+CGG | - | chr8_1:45827618-45827637 | Msa1196490:intron | 60.0% |
| !! | AGCGGCGTCGATGAACGGTT+GGG | - | chr8_1:45827623-45827642 | Msa1196490:intron | 60.0% |
| CGGACCAAGGAGTCATGGTG+AGG | - | chr8_1:45827689-45827708 | Msa1196490:intron | 60.0% | |
| ! | CTCCCATTCGAGGAGGGCAC+AGG | + | chr8_1:45826953-45826972 | None:intergenic | 65.0% |
| CTGTGCCCTCCTCGAATGGG+AGG | - | chr8_1:45826951-45826970 | Msa1196490:CDS | 65.0% | |
| GGAAATGCCTGCCACAGCCG+AGG | - | chr8_1:45827479-45827498 | Msa1196490:intron | 65.0% | |
| TAGAGGTGGTGCCTCGGCTG+TGG | + | chr8_1:45827493-45827512 | None:intergenic | 65.0% | |
| !! | GAGCGGCGTCGATGAACGGT+TGG | - | chr8_1:45827622-45827641 | Msa1196490:intron | 65.0% |
| !! | GCGGCGTCGATGAACGGTTG+GGG | - | chr8_1:45827624-45827643 | Msa1196490:intron | 65.0% |
| ! | CTCCCATTCGAGGAGGGCAC+AGG | + | chr8_1:45826953-45826972 | None:intergenic | 65.0% |
| CTGTGCCCTCCTCGAATGGG+AGG | - | chr8_1:45826951-45826970 | Msa1196490:CDS | 65.0% | |
| GGAAATGCCTGCCACAGCCG+AGG | - | chr8_1:45827479-45827498 | Msa1196490:intron | 65.0% | |
| TAGAGGTGGTGCCTCGGCTG+TGG | + | chr8_1:45827493-45827512 | None:intergenic | 65.0% | |
| !! | GAGCGGCGTCGATGAACGGT+TGG | - | chr8_1:45827622-45827641 | Msa1196490:intron | 65.0% |
| !! | GCGGCGTCGATGAACGGTTG+GGG | - | chr8_1:45827624-45827643 | Msa1196490:intron | 65.0% |
| GGTGGTGCCTCGGCTGTGGC+AGG | + | chr8_1:45827489-45827508 | None:intergenic | 75.0% | |
| GGTGGTGCCTCGGCTGTGGC+AGG | + | chr8_1:45827489-45827508 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 45825738 | 45827824 | 45825738 | ID=Msa1196490;Name=Msa1196490 |
| chr8_1 | mRNA | 45825738 | 45827824 | 45825738 | ID=Msa1196490-mRNA-1;Parent=Msa1196490;Name=Msa1196490-mRNA-1;_AED=0.19;_eAED=0.19;_QI=0|0|0|0.66|1|1|3|0|483 |
| chr8_1 | exon | 45827819 | 45827824 | 45827819 | ID=Msa1196490-mRNA-1:exon:14614;Parent=Msa1196490-mRNA-1 |
| chr8_1 | exon | 45827304 | 45827309 | 45827304 | ID=Msa1196490-mRNA-1:exon:14613;Parent=Msa1196490-mRNA-1 |
| chr8_1 | exon | 45825738 | 45827177 | 45825738 | ID=Msa1196490-mRNA-1:exon:14612;Parent=Msa1196490-mRNA-1 |
| chr8_1 | CDS | 45827819 | 45827824 | 45827819 | ID=Msa1196490-mRNA-1:cds;Parent=Msa1196490-mRNA-1 |
| chr8_1 | CDS | 45827304 | 45827309 | 45827304 | ID=Msa1196490-mRNA-1:cds;Parent=Msa1196490-mRNA-1 |
| chr8_1 | CDS | 45825738 | 45827177 | 45825738 | ID=Msa1196490-mRNA-1:cds;Parent=Msa1196490-mRNA-1 |
| Gene Sequence |
| Protein sequence |
