Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1196760 | XP_013445933.1 | 96.060 | 863 | 11 | 1 | 1 | 863 | 1 | 840 | 0.0 | 1695 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1196760 | sp|O80739|POT12_ARATH | 71.807 | 869 | 195 | 10 | 3 | 863 | 1 | 827 | 0.0 | 1230 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1196760 | Msa1303990 | 0.823633 | 1.246856e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1196760 | MtrunA17_Chr8g0365001 | 96.060 | 863 | 11 | 1 | 1 | 863 | 1 | 840 | 0.0 | 1695 |
| Msa1196760 | MtrunA17_Chr2g0279131 | 54.233 | 874 | 356 | 7 | 7 | 863 | 3 | 849 | 0.0 | 934 |
| Msa1196760 | MtrunA17_Chr5g0429991 | 54.748 | 853 | 348 | 7 | 21 | 863 | 25 | 849 | 0.0 | 907 |
| Msa1196760 | MtrunA17_Chr4g0055471 | 44.606 | 825 | 391 | 10 | 61 | 863 | 35 | 815 | 0.0 | 721 |
| Msa1196760 | MtrunA17_Chr2g0297291 | 46.650 | 806 | 375 | 11 | 71 | 863 | 26 | 789 | 0.0 | 711 |
| Msa1196760 | MtrunA17_Chr6g0461871 | 45.202 | 792 | 395 | 8 | 86 | 863 | 19 | 785 | 0.0 | 704 |
| Msa1196760 | MtrunA17_Chr7g0268981 | 44.279 | 804 | 379 | 8 | 59 | 861 | 36 | 771 | 0.0 | 701 |
| Msa1196760 | MtrunA17_Chr4g0052401 | 45.466 | 805 | 384 | 11 | 71 | 863 | 26 | 787 | 0.0 | 680 |
| Msa1196760 | MtrunA17_Chr5g0430731 | 44.076 | 785 | 392 | 10 | 81 | 863 | 15 | 754 | 0.0 | 680 |
| Msa1196760 | MtrunA17_Chr6g0451081 | 44.542 | 797 | 392 | 10 | 84 | 863 | 13 | 776 | 0.0 | 673 |
| Msa1196760 | MtrunA17_Chr8g0380281 | 43.408 | 804 | 421 | 5 | 64 | 863 | 9 | 782 | 0.0 | 668 |
| Msa1196760 | MtrunA17_Chr3g0128831 | 43.805 | 799 | 392 | 12 | 94 | 863 | 24 | 794 | 0.0 | 652 |
| Msa1196760 | MtrunA17_Chr8g0387661 | 41.625 | 800 | 401 | 9 | 94 | 863 | 29 | 792 | 0.0 | 587 |
| Msa1196760 | MtrunA17_Chr8g0393241 | 34.272 | 817 | 474 | 11 | 77 | 859 | 8 | 795 | 9.74e-167 | 504 |
| Msa1196760 | MtrunA17_Chr8g0344561 | 41.224 | 621 | 304 | 8 | 243 | 863 | 13 | 572 | 4.05e-163 | 487 |
| Msa1196760 | MtrunA17_Chr8g0375411 | 35.632 | 783 | 401 | 13 | 80 | 861 | 16 | 696 | 4.17e-163 | 491 |
| Msa1196760 | MtrunA17_Chr8g0365031 | 46.774 | 496 | 229 | 4 | 263 | 749 | 40 | 509 | 1.86e-153 | 461 |
| Msa1196760 | MtrunA17_Chr2g0297311 | 50.602 | 415 | 176 | 4 | 100 | 512 | 58 | 445 | 1.34e-139 | 422 |
| Msa1196760 | MtrunA17_Chr5g0430571 | 37.874 | 602 | 288 | 9 | 263 | 863 | 19 | 535 | 8.03e-138 | 420 |
| Msa1196760 | MtrunA17_Chr5g0413721 | 47.588 | 456 | 205 | 6 | 73 | 517 | 1 | 433 | 2.28e-132 | 417 |
| Msa1196760 | MtrunA17_Chr5g0413721 | 36.486 | 370 | 204 | 4 | 511 | 863 | 516 | 871 | 6.90e-69 | 245 |
| Msa1196760 | MtrunA17_Chr8g0344591 | 42.072 | 473 | 227 | 4 | 243 | 715 | 13 | 438 | 2.90e-131 | 401 |
| Msa1196760 | MtrunA17_Chr2g0297321 | 41.274 | 361 | 187 | 5 | 512 | 863 | 3 | 347 | 5.80e-85 | 275 |
| Msa1196760 | MtrunA17_Chr8g0365041 | 45.339 | 236 | 111 | 6 | 21 | 252 | 2 | 223 | 2.64e-58 | 199 |
| Msa1196760 | MtrunA17_Chr5g0413751 | 44.318 | 176 | 98 | 0 | 512 | 687 | 133 | 308 | 8.54e-52 | 183 |
| Msa1196760 | MtrunA17_Chr5g0413751 | 39.716 | 141 | 69 | 4 | 106 | 239 | 7 | 138 | 4.06e-19 | 89.4 |
| Msa1196760 | MtrunA17_Chr8g0344581 | 56.209 | 153 | 62 | 2 | 91 | 243 | 3 | 150 | 3.28e-51 | 176 |
| Msa1196760 | MtrunA17_Chr8g0344551 | 56.209 | 153 | 62 | 2 | 91 | 243 | 3 | 150 | 4.64e-51 | 176 |
| Msa1196760 | MtrunA17_Chr5g0430551 | 48.701 | 154 | 76 | 3 | 92 | 243 | 11 | 163 | 7.24e-41 | 148 |
| Msa1196760 | MtrunA17_Chr1g0159401 | 41.259 | 143 | 54 | 3 | 241 | 383 | 12 | 124 | 3.65e-24 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1196760 | AT1G60160.1 | 71.807 | 869 | 195 | 10 | 3 | 863 | 1 | 827 | 0.0 | 1230 |
| Msa1196760 | AT5G09400.1 | 55.153 | 883 | 337 | 9 | 8 | 863 | 8 | 858 | 0.0 | 923 |
| Msa1196760 | AT4G33530.1 | 54.408 | 862 | 355 | 6 | 14 | 863 | 20 | 855 | 0.0 | 909 |
| Msa1196760 | AT4G13420.1 | 44.009 | 843 | 405 | 12 | 23 | 861 | 4 | 783 | 0.0 | 720 |
| Msa1196760 | AT4G33530.2 | 56.406 | 640 | 249 | 5 | 228 | 863 | 14 | 627 | 0.0 | 716 |
| Msa1196760 | AT2G35060.4 | 45.964 | 768 | 370 | 7 | 100 | 863 | 66 | 792 | 0.0 | 691 |
| Msa1196760 | AT2G35060.1 | 45.964 | 768 | 370 | 7 | 100 | 863 | 66 | 792 | 0.0 | 691 |
| Msa1196760 | AT2G35060.3 | 45.964 | 768 | 370 | 7 | 100 | 863 | 66 | 792 | 0.0 | 691 |
| Msa1196760 | AT2G35060.2 | 45.904 | 769 | 370 | 8 | 100 | 863 | 66 | 793 | 0.0 | 686 |
| Msa1196760 | AT1G31120.1 | 46.867 | 766 | 371 | 7 | 100 | 863 | 65 | 796 | 0.0 | 686 |
| Msa1196760 | AT2G40540.1 | 43.542 | 813 | 395 | 9 | 83 | 863 | 14 | 794 | 0.0 | 663 |
| Msa1196760 | AT2G40540.5 | 43.542 | 813 | 395 | 9 | 83 | 863 | 14 | 794 | 0.0 | 663 |
| Msa1196760 | AT2G40540.4 | 43.542 | 813 | 395 | 9 | 83 | 863 | 14 | 794 | 0.0 | 663 |
| Msa1196760 | AT2G40540.2 | 43.542 | 813 | 395 | 9 | 83 | 863 | 14 | 794 | 0.0 | 663 |
| Msa1196760 | AT2G40540.3 | 43.542 | 813 | 395 | 9 | 83 | 863 | 14 | 794 | 0.0 | 663 |
| Msa1196760 | AT5G14880.1 | 43.921 | 806 | 389 | 12 | 84 | 863 | 13 | 781 | 0.0 | 658 |
| Msa1196760 | AT1G70300.1 | 43.033 | 811 | 413 | 9 | 73 | 863 | 1 | 782 | 0.0 | 650 |
| Msa1196760 | AT4G19960.2 | 45.725 | 772 | 389 | 5 | 96 | 863 | 62 | 807 | 0.0 | 648 |
| Msa1196760 | AT2G30070.1 | 42.239 | 786 | 365 | 8 | 80 | 863 | 14 | 712 | 0.0 | 642 |
| Msa1196760 | AT4G19960.1 | 44.797 | 788 | 389 | 6 | 96 | 863 | 62 | 823 | 0.0 | 639 |
| Msa1196760 | AT3G02050.1 | 43.429 | 799 | 402 | 8 | 86 | 863 | 20 | 789 | 0.0 | 637 |
| Msa1196760 | AT4G19960.3 | 44.236 | 798 | 389 | 6 | 96 | 863 | 62 | 833 | 0.0 | 634 |
| Msa1196760 | AT4G23640.1 | 43.506 | 793 | 390 | 8 | 94 | 861 | 14 | 773 | 0.0 | 625 |
| Msa1196760 | AT2G30070.2 | 40.118 | 678 | 319 | 6 | 186 | 863 | 2 | 592 | 1.93e-175 | 520 |
| Msa1196760 | AT4G19960.4 | 43.636 | 605 | 313 | 3 | 263 | 863 | 6 | 586 | 1.28e-167 | 499 |
Find 181 sgRNAs with CRISPR-Local
Find 372 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGGAACTTCCATGATTAT+TGG | 0.176216 | 8_1:-46448212 | Msa1196760:CDS |
| TGCATTTGAGCAACTTCTTA+TGG | 0.203702 | 8_1:-46444497 | Msa1196760:CDS |
| CTTGATCTTGGTTCCAATCT+TGG | 0.206414 | 8_1:-46444775 | Msa1196760:CDS |
| TTTACATCCCTGTTATTAAT+TGG | 0.208912 | 8_1:-46445356 | Msa1196760:CDS |
| ATGTCTCCTCCTTGCTTATA+TGG | 0.219614 | 8_1:-46445909 | Msa1196760:CDS |
| AAGCTCTTCTGCTCCATTAC+TGG | 0.258461 | 8_1:+46444357 | None:intergenic |
| CTTAGAGAAGCAATGGATTC+AGG | 0.266535 | 8_1:-46444199 | Msa1196760:CDS |
| CGCTGTACTCGCTGATTTGT+AGG | 0.266783 | 8_1:-46448397 | Msa1196760:CDS |
| TATTATTTCTTCAAGAATAA+TGG | 0.267048 | 8_1:-46446230 | Msa1196760:CDS |
| GGTCTACAGGATCAAATAAA+TGG | 0.272312 | 8_1:-46447330 | Msa1196760:CDS |
| TTTAAAGCCCTTTCGAGTTC+TGG | 0.273431 | 8_1:+46448296 | None:intergenic |
| GGCTTGTTAAGAAACCTAAA+AGG | 0.285699 | 8_1:-46449516 | Msa1196760:CDS |
| CAGACTCTTGGTGTTGTATA+TGG | 0.289384 | 8_1:-46448677 | Msa1196760:CDS |
| GTGATGTATACGTGGAACTA+TGG | 0.302434 | 8_1:-46444853 | Msa1196760:CDS |
| TTGTTAGTGTTGGTTCTTCT+TGG | 0.308220 | 8_1:-46448230 | Msa1196760:CDS |
| ATCAGAAACCAATTAATAAC+AGG | 0.314103 | 8_1:+46445348 | None:intergenic |
| GAAGCAATGTTTGCAGATCT+TGG | 0.314553 | 8_1:-46446086 | Msa1196760:CDS |
| TTGATCCTGTAGACCACTTA+TGG | 0.326090 | 8_1:+46447338 | None:intergenic |
| CGTTAAGCAATCAATGGCTT+TGG | 0.328371 | 8_1:-46445433 | Msa1196760:CDS |
| TGGCTTTGGGATGCTTCCCC+AGG | 0.332579 | 8_1:-46445419 | Msa1196760:CDS |
| AGTGAGTCTAGGTGGGTTGA+TGG | 0.339971 | 8_1:-46449622 | Msa1196760:CDS |
| GAGAAGGGTATGGTTCAATT+AGG | 0.342192 | 8_1:-46449543 | Msa1196760:CDS |
| TAGAAGGAACTGCAGGAAAA+TGG | 0.349309 | 8_1:+46444693 | None:intergenic |
| ACATCGTCATCTGAGTTAAT+AGG | 0.355218 | 8_1:+46448602 | None:intergenic |
| TACTCTTACTGTTCCAAGAT+TGG | 0.357857 | 8_1:+46444762 | None:intergenic |
| ATACATCACGGAGAGGAAAA+AGG | 0.362860 | 8_1:+46444867 | None:intergenic |
| ATTCTAACTCCAGCGATATC+AGG | 0.368280 | 8_1:-46448182 | Msa1196760:intron |
| CAGGATCAAATAAATGGATT+TGG | 0.372956 | 8_1:-46447324 | Msa1196760:CDS |
| GGTTGTGTTCTGTGCATTAC+AGG | 0.377456 | 8_1:-46446182 | Msa1196760:CDS |
| GTATTCTTCAAATCTGTTCC+AGG | 0.388671 | 8_1:-46445842 | Msa1196760:intron |
| TTATATAGCAATCCTATTCC+TGG | 0.391926 | 8_1:+46444739 | None:intergenic |
| TTGCAATATCTGTAGTGCTT+TGG | 0.394561 | 8_1:+46445295 | None:intergenic |
| ATGGACTTAATGCTTGATCT+TGG | 0.400243 | 8_1:-46444787 | Msa1196760:CDS |
| GCATTAGCATTTCAGACTCT+TGG | 0.401893 | 8_1:-46448689 | Msa1196760:CDS |
| TGTCTCCTCCTTGCTTATAT+GGG | 0.404323 | 8_1:-46445908 | Msa1196760:CDS |
| GAAGAGCTGGAAGGCTTAGA+AGG | 0.411739 | 8_1:+46444677 | None:intergenic |
| GGTCAGAATTTAGAAGAAAC+AGG | 0.416226 | 8_1:-46444316 | Msa1196760:CDS |
| ATTTAGAAGAAGAATGAAGT+TGG | 0.417680 | 8_1:-46449698 | Msa1196760:exon |
| CATCCCCACTTGAATGATAT+TGG | 0.418494 | 8_1:+46444036 | None:intergenic |
| AAGAAATAATAGATATATGC+TGG | 0.419596 | 8_1:+46446242 | None:intergenic |
| ATCTCCATGTCCAAGCAAAT+AGG | 0.423110 | 8_1:+46444171 | None:intergenic |
| GATTCACAAACCTGTATTGC+TGG | 0.426723 | 8_1:+46446050 | None:intergenic |
| ATCTGTAGTGCTTTGGAAGA+TGG | 0.427886 | 8_1:+46445302 | None:intergenic |
| TCTTGAGGAACCACAGGAAT+CGG | 0.428798 | 8_1:+46444619 | None:intergenic |
| CTTTCTTCTTGAGGAACCAC+AGG | 0.434369 | 8_1:+46444613 | None:intergenic |
| GTTAAGCAATCAATGGCTTT+GGG | 0.437944 | 8_1:-46445432 | Msa1196760:CDS |
| TCAAGTGGGGATGACATATA+TGG | 0.439510 | 8_1:-46444026 | Msa1196760:CDS |
| TCATCAGCTTGTTGGCGATT+CGG | 0.441990 | 8_1:+46448353 | None:intergenic |
| TAACTCAGATGACGATGTCT+TGG | 0.445278 | 8_1:-46448597 | Msa1196760:CDS |
| TCAGGATTCACCTATTTGCT+TGG | 0.448637 | 8_1:-46444181 | Msa1196760:CDS |
| AGATTTGTTCATCAGCTTGT+TGG | 0.449742 | 8_1:+46448345 | None:intergenic |
| CTAATGCAATGGTAGGCAAA+AGG | 0.449887 | 8_1:+46448705 | None:intergenic |
| ACAGTAAGAGTACCAGGAAT+AGG | 0.451647 | 8_1:-46444751 | Msa1196760:CDS |
| GAAGGAAGTGTGAGGTTGTT+GGG | 0.455074 | 8_1:-46449664 | Msa1196760:CDS |
| ACAGATATTGCAAATGCATA+TGG | 0.455341 | 8_1:-46445285 | Msa1196760:intron |
| GTCTGCCATAAGTGGTCTAC+AGG | 0.455828 | 8_1:-46447343 | Msa1196760:CDS |
| CGGAACATATGATAATCTTT+CGG | 0.459350 | 8_1:+46444568 | None:intergenic |
| AGCATTCAACAGTTCGGTAC+TGG | 0.463934 | 8_1:-46446377 | Msa1196760:CDS |
| GTAATGGAGCAGAAGAGCTT+AGG | 0.465808 | 8_1:-46444354 | Msa1196760:CDS |
| TTGATGGAAGTGAAGTTGAT+TGG | 0.468335 | 8_1:-46449606 | Msa1196760:CDS |
| GTTCTCAAAGCTAATGATAA+CGG | 0.469743 | 8_1:-46448512 | Msa1196760:CDS |
| GGTATGAATTATCTTGAGCC+TGG | 0.469794 | 8_1:+46445401 | None:intergenic |
| GTGGGAGTAGTGAGTCTAGG+TGG | 0.470544 | 8_1:-46449630 | Msa1196760:CDS |
| AAATTCTGACCATGCAATAG+TGG | 0.471151 | 8_1:+46444328 | None:intergenic |
| TTCGTGCGTTAAGCAATCAA+TGG | 0.473425 | 8_1:-46445439 | Msa1196760:CDS |
| ATTTCAGGCATTGCTGAAGT+TGG | 0.477174 | 8_1:-46445063 | Msa1196760:intron |
| CAAATAAATGGATTTGGTAC+AGG | 0.484132 | 8_1:-46447318 | Msa1196760:intron |
| TGCTGAAGTTGGTGTGATGA+TGG | 0.484656 | 8_1:-46445052 | Msa1196760:CDS |
| TTCAGCTCTTAGAGAAGCAA+TGG | 0.484711 | 8_1:-46444206 | Msa1196760:CDS |
| AATCTTTCGGACATACTCTT+CGG | 0.485567 | 8_1:+46444581 | None:intergenic |
| AACTCAGATGACGATGTCTT+GGG | 0.489876 | 8_1:-46448596 | Msa1196760:CDS |
| AATACCATCACCAATAATCA+TGG | 0.490163 | 8_1:+46448202 | None:intergenic |
| AGAAGGAAGTGTGAGGTTGT+TGG | 0.491219 | 8_1:-46449665 | Msa1196760:CDS |
| TTCACCTATTTGCTTGGACA+TGG | 0.492212 | 8_1:-46444175 | Msa1196760:CDS |
| ATATGTTCCGCTGTGTTGCT+AGG | 0.493459 | 8_1:-46444555 | Msa1196760:CDS |
| CTTGGAACAGTAAGAGTACC+AGG | 0.493863 | 8_1:-46444757 | Msa1196760:CDS |
| TGATGGAAGTGAAGTTGATT+GGG | 0.493878 | 8_1:-46449605 | Msa1196760:CDS |
| TTCCGCTGTGTTGCTAGGTA+CGG | 0.495566 | 8_1:-46444550 | Msa1196760:CDS |
| TTGTTCAGCATTCAACAGTT+CGG | 0.497318 | 8_1:-46446383 | Msa1196760:CDS |
| TCTGATCTTGCAGCCAGTAA+TGG | 0.500060 | 8_1:-46444370 | Msa1196760:CDS |
| AGAAGCTGCGTTGGAGTTGG+AGG | 0.504460 | 8_1:-46444440 | Msa1196760:CDS |
| AGCGATGAAAATGAGAAAAG+AGG | 0.504700 | 8_1:+46446155 | None:intergenic |
| ATTGACATGCATTCTCGTGC+AGG | 0.505756 | 8_1:-46446113 | Msa1196760:CDS |
| TGGGAGTAGTGAGTCTAGGT+GGG | 0.507217 | 8_1:-46449629 | Msa1196760:CDS |
| AAGAACCATAAAGCAAGTAC+AGG | 0.514695 | 8_1:+46446332 | None:intergenic |
| TAATGCAATGGTAGGCAAAA+GGG | 0.516041 | 8_1:+46448706 | None:intergenic |
| GTCTTGAGAAATTCTTGAGA+AGG | 0.523407 | 8_1:-46444471 | Msa1196760:CDS |
| CATGGAAGTGATGGTAGAGA+AGG | 0.524379 | 8_1:-46449559 | Msa1196760:CDS |
| CAGTTCGGTACTGGCAAAGT+GGG | 0.525126 | 8_1:-46446368 | Msa1196760:CDS |
| GTATGAATTATCTTGAGCCT+GGG | 0.527026 | 8_1:+46445402 | None:intergenic |
| GCTTGTTAAGAAACCTAAAA+GGG | 0.527629 | 8_1:-46449515 | Msa1196760:CDS |
| TTGTTGGGAAGTAGCAGTGG+TGG | 0.527762 | 8_1:-46449649 | Msa1196760:CDS |
| AAGTTGGATAAGATTGAAGA+AGG | 0.529662 | 8_1:-46449682 | Msa1196760:CDS |
| GTTAGAAGCTGCGTTGGAGT+TGG | 0.530443 | 8_1:-46444443 | Msa1196760:CDS |
| CATGTCAATTACGATGCTTA+CGG | 0.531924 | 8_1:+46446127 | None:intergenic |
| AATACACTTGAATAAGAAGC+AGG | 0.533433 | 8_1:+46445860 | None:intergenic |
| TGATGTATACGTGGAACTAT+GGG | 0.537017 | 8_1:-46444852 | Msa1196760:CDS |
| TCTTGAGAAATTCTTGAGAA+GGG | 0.540745 | 8_1:-46444470 | Msa1196760:CDS |
| GGAAGCGTTAGAAGCTGCGT+TGG | 0.543749 | 8_1:-46444449 | Msa1196760:CDS |
| ACTACAATGGAATGAAGAGC+TGG | 0.545833 | 8_1:+46444664 | None:intergenic |
| GAAAGCTCGTATTCTAGACT+AGG | 0.551419 | 8_1:+46444226 | None:intergenic |
| TGTTGGGAAGTAGCAGTGGT+GGG | 0.554534 | 8_1:-46449648 | Msa1196760:CDS |
| GTGGTGGGAGTAGTGAGTCT+AGG | 0.556201 | 8_1:-46449633 | Msa1196760:CDS |
| ACAGATTGCTTTCACTTGTG+TGG | 0.556972 | 8_1:-46445939 | Msa1196760:intron |
| TCCTACGCCAGAACTCGAAA+GGG | 0.560023 | 8_1:-46448303 | Msa1196760:CDS |
| GTGTTTGTTATAGCTACACT+TGG | 0.562933 | 8_1:-46445501 | Msa1196760:CDS |
| TTCCTACGCCAGAACTCGAA+AGG | 0.565505 | 8_1:-46448304 | Msa1196760:CDS |
| GAAGGCTTAGAAGGAACTGC+AGG | 0.569528 | 8_1:+46444686 | None:intergenic |
| GATCCTCCATGGTCTCATCA+TGG | 0.569540 | 8_1:-46449577 | Msa1196760:CDS |
| CAATGGTAGGCAAAAGGGAA+AGG | 0.571320 | 8_1:+46448711 | None:intergenic |
| GGTACGGTTACAAAGACGTT+CGG | 0.573020 | 8_1:-46444534 | Msa1196760:CDS |
| GAAGCTATGGAGATTGCTGC+TGG | 0.576180 | 8_1:-46449475 | Msa1196760:CDS |
| AAAAGTGCATGGTCAGCTCT+TGG | 0.578795 | 8_1:-46446206 | Msa1196760:CDS |
| TGGTCTCATCATGGAAGTGA+TGG | 0.581437 | 8_1:-46449568 | Msa1196760:CDS |
| AGAAATAATAGATATATGCT+GGG | 0.582392 | 8_1:+46446243 | None:intergenic |
| TAATTATCTGAAAGAATGCA+TGG | 0.582518 | 8_1:+46443989 | None:intergenic |
| GGTATGGTTCAATTAGGAGA+AGG | 0.584230 | 8_1:-46449537 | Msa1196760:CDS |
| TGAAATGCTAATGCAATGGT+AGG | 0.586278 | 8_1:+46448698 | None:intergenic |
| AGAATAATGGCAAAAGTGCA+TGG | 0.588583 | 8_1:-46446217 | Msa1196760:CDS |
| GCAGTGATGTCTGCCATAAG+TGG | 0.591102 | 8_1:-46447351 | Msa1196760:intron |
| AGTGATGGTAGAGAAGGGTA+TGG | 0.592180 | 8_1:-46449553 | Msa1196760:CDS |
| TAAGAAGTTGCTCAAATGCA+TGG | 0.592547 | 8_1:+46444500 | None:intergenic |
| TGGTGTTGTATATGGTGACA+TGG | 0.593357 | 8_1:-46448669 | Msa1196760:CDS |
| CTAAGAAAGAACTGCAGAGG+AGG | 0.593431 | 8_1:-46444085 | Msa1196760:CDS |
| CACACCAATATCATTCAAGT+GGG | 0.594275 | 8_1:-46444040 | Msa1196760:CDS |
| ATATAAGCAAGGAGGAGACA+TGG | 0.594374 | 8_1:+46445911 | None:intergenic |
| TCCTCTCCGTGATGTATACG+TGG | 0.597555 | 8_1:-46444861 | Msa1196760:CDS |
| AAAGCTAATGATAACGGAGA+AGG | 0.599045 | 8_1:-46448506 | Msa1196760:intron |
| CTATATAATGAGCTTGTCCA+AGG | 0.600793 | 8_1:-46444724 | Msa1196760:CDS |
| GCTTATGTACCTGATATCGC+TGG | 0.602386 | 8_1:+46448173 | None:intergenic |
| AGGTTGTTGGGAAGTAGCAG+TGG | 0.604155 | 8_1:-46449652 | Msa1196760:CDS |
| ACAGTTCGGTACTGGCAAAG+TGG | 0.607010 | 8_1:-46446369 | Msa1196760:CDS |
| TGATGGTGTGGACACCGCCT+CGG | 0.607502 | 8_1:-46444407 | Msa1196760:CDS |
| GGAACTTCTACCTCACATGA+AGG | 0.607974 | 8_1:-46444295 | Msa1196760:CDS |
| GGAAAATGGAGGGAACACCT+TGG | 0.608538 | 8_1:+46444707 | None:intergenic |
| ACTTCCATGATTATTGGTGA+TGG | 0.610262 | 8_1:-46448206 | Msa1196760:CDS |
| GAAGCTGCGTTGGAGTTGGA+GGG | 0.610650 | 8_1:-46444439 | Msa1196760:CDS |
| GGAGTGTCTTGAAGTACCGA+AGG | 0.610764 | 8_1:-46444831 | Msa1196760:CDS |
| TGGTCATGATCAACACTCCA+AGG | 0.610783 | 8_1:-46449455 | Msa1196760:intron |
| CTTAGGATTCCACTATTGCA+TGG | 0.610989 | 8_1:-46444337 | Msa1196760:CDS |
| TCACACCAATATCATTCAAG+TGG | 0.616744 | 8_1:-46444041 | Msa1196760:CDS |
| ATGGAAGTGATGGTAGAGAA+GGG | 0.619739 | 8_1:-46449558 | Msa1196760:CDS |
| AGTCTGAAATGCTAATGCAA+TGG | 0.620172 | 8_1:+46448694 | None:intergenic |
| TAAATATGTTCCGATTCCTG+TGG | 0.623832 | 8_1:-46444629 | Msa1196760:CDS |
| AGGAACTGCAGGAAAATGGA+GGG | 0.625809 | 8_1:+46444697 | None:intergenic |
| CAATGGAATGAAGAGCTGGA+AGG | 0.626473 | 8_1:+46444668 | None:intergenic |
| ATTGGGATGAAGATCCTCCA+TGG | 0.626569 | 8_1:-46449588 | Msa1196760:CDS |
| TTGGAGGGTAACTTAACTGA+TGG | 0.627012 | 8_1:-46444424 | Msa1196760:CDS |
| AAGGAACTGCAGGAAAATGG+AGG | 0.628157 | 8_1:+46444696 | None:intergenic |
| AGAACCATAAAGCAAGTACA+GGG | 0.629862 | 8_1:+46446333 | None:intergenic |
| CAGCTTGGCCCATATAAGCA+AGG | 0.633487 | 8_1:+46445900 | None:intergenic |
| TATGAATTATCTTGAGCCTG+GGG | 0.640497 | 8_1:+46445403 | None:intergenic |
| AGTGTAGCTATAACAAACAC+TGG | 0.643046 | 8_1:+46445504 | None:intergenic |
| GGGTAACTTAACTGATGGTG+TGG | 0.643249 | 8_1:-46444419 | Msa1196760:CDS |
| CGGTTACAAAGACGTTCGGA+AGG | 0.649414 | 8_1:-46444530 | Msa1196760:CDS |
| AAATAAAGGAGACTTTGGAA+AGG | 0.655391 | 8_1:-46448274 | Msa1196760:CDS |
| TTTCTAAGAAAGAACTGCAG+AGG | 0.657224 | 8_1:-46444088 | Msa1196760:CDS |
| TCACTTCCATGATGAGACCA+TGG | 0.659119 | 8_1:+46449571 | None:intergenic |
| TGTTGACGCACCTTCATGTG+AGG | 0.659249 | 8_1:+46444285 | None:intergenic |
| TCCGACGACATATAACTCGA+TGG | 0.660897 | 8_1:+46444256 | None:intergenic |
| AGTGCATGGTCAGCTCTTGG+TGG | 0.663014 | 8_1:-46446203 | Msa1196760:CDS |
| ACCATCGAGTTATATGTCGT+CGG | 0.666017 | 8_1:-46444257 | Msa1196760:CDS |
| AAGCATTACTAGTGTCACCA+AGG | 0.672487 | 8_1:+46445020 | None:intergenic |
| TCAGAAACCAATTAATAACA+GGG | 0.686251 | 8_1:+46445349 | None:intergenic |
| GGTGTTGTATATGGTGACAT+GGG | 0.689848 | 8_1:-46448668 | Msa1196760:CDS |
| GAGTGTCTTGAAGTACCGAA+GGG | 0.690651 | 8_1:-46444830 | Msa1196760:CDS |
| ATTTCTTGTATCCACCGAGG+CGG | 0.700960 | 8_1:+46444393 | None:intergenic |
| TGGTGTGGACACCGCCTCGG+TGG | 0.702237 | 8_1:-46444404 | Msa1196760:CDS |
| ATAGTTCCACGTATACATCA+CGG | 0.707884 | 8_1:+46444855 | None:intergenic |
| CATTACTAGTGTCACCAAGG+TGG | 0.712618 | 8_1:+46445023 | None:intergenic |
| GATGATGGTTAGCACCACCT+TGG | 0.715380 | 8_1:-46445037 | Msa1196760:CDS |
| CTTGGCCCATATAAGCAAGG+AGG | 0.723455 | 8_1:+46445903 | None:intergenic |
| TCCACGTATACATCACGGAG+AGG | 0.724985 | 8_1:+46444860 | None:intergenic |
| AGATTGAAGAAGGAAGTGTG+AGG | 0.728871 | 8_1:-46449672 | Msa1196760:CDS |
| ACACCAATATCATTCAAGTG+GGG | 0.735184 | 8_1:-46444039 | Msa1196760:CDS |
| GAACCATAAAGCAAGTACAG+GGG | 0.743969 | 8_1:+46446334 | None:intergenic |
| AGAATTTCTTGTATCCACCG+AGG | 0.747791 | 8_1:+46444390 | None:intergenic |
| CTTCCATGATGAGACCATGG+AGG | 0.760877 | 8_1:+46449574 | None:intergenic |
| ACTTGAATGATATTGGTGTG+AGG | 0.767010 | 8_1:+46444043 | None:intergenic |
| GAATGCTGAACAAAGCCACG+AGG | 0.770685 | 8_1:+46446393 | None:intergenic |
| AACCGTACCTAGCAACACAG+CGG | 0.771805 | 8_1:+46444548 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CAAATTTTAAGATAATATAT+GGG | - | chr8_1:46446633-46446652 | Msa1196760:intron | 10.0% |
| !! | AATTATATAAAATGATACCT+TGG | + | chr8_1:46444202-46444221 | None:intergenic | 15.0% |
| !!! | ATAAAAACATATTTTGCTAA+TGG | + | chr8_1:46445104-46445123 | None:intergenic | 15.0% |
| !! | ATTTATAATATAAGCAAAGA+TGG | - | chr8_1:46446406-46446425 | Msa1196760:CDS | 15.0% |
| !! | CCATATATTATCTTAAAATT+TGG | + | chr8_1:46446635-46446654 | None:intergenic | 15.0% |
| !!! | CCAAATTTTAAGATAATATA+TGG | - | chr8_1:46446632-46446651 | Msa1196760:intron | 15.0% |
| !!! | TATTATTTCTTCAAGAATAA+TGG | - | chr8_1:46447407-46447426 | Msa1196760:intron | 15.0% |
| !! | TAAATACAAACTATATTAAG+AGG | - | chr8_1:46448038-46448057 | Msa1196760:intron | 15.0% |
| !!! | GTTATGTATATTAATCATTT+TGG | - | chr8_1:46448066-46448085 | Msa1196760:intron | 15.0% |
| !!! | ATTCCTTTTTTTTTTCTTTA+TGG | - | chr8_1:46448407-46448426 | Msa1196760:CDS | 15.0% |
| !!! | ATCATAGATTATTCATGTTT+TGG | - | chr8_1:46444273-46444292 | Msa1196760:CDS | 20.0% |
| !! | TATGAAAATAAGCTGAAAAA+AGG | + | chr8_1:46444472-46444491 | None:intergenic | 20.0% |
| !! | ATATATGCAGTGTTAAATAA+AGG | + | chr8_1:46444858-46444877 | None:intergenic | 20.0% |
| !! | TTTAAAAATAAAGGAGACTT+TGG | - | chr8_1:46445358-46445377 | Msa1196760:CDS | 20.0% |
| !! | TCAAACTAATCTCTATATAT+AGG | - | chr8_1:46446109-46446128 | Msa1196760:CDS | 20.0% |
| !! | TTAAGAATTGTAGATTCATA+GGG | + | chr8_1:46446257-46446276 | None:intergenic | 20.0% |
| !! | ATTAAGAATTGTAGATTCAT+AGG | + | chr8_1:46446258-46446277 | None:intergenic | 20.0% |
| !! | TTTAGTTATGTTACAAACTA+TGG | - | chr8_1:46447135-46447154 | Msa1196760:intron | 20.0% |
| !! | AGAAATAATAGATATATGCT+GGG | + | chr8_1:46447397-46447416 | None:intergenic | 20.0% |
| !! | AAGAAATAATAGATATATGC+TGG | + | chr8_1:46447398-46447417 | None:intergenic | 20.0% |
| !!! | ATTTAATTTATATCCACTGT+CGG | + | chr8_1:46448023-46448042 | None:intergenic | 20.0% |
| !! | GAACCATAAAGAAAAAAAAA+AGG | + | chr8_1:46448413-46448432 | None:intergenic | 20.0% |
| !!! | TTTTTTTCTTTATGGTTCTA+AGG | - | chr8_1:46448415-46448434 | Msa1196760:intron | 20.0% |
| !! | ACAAATTTCGACAATAATTT+AGG | + | chr8_1:46448491-46448510 | None:intergenic | 20.0% |
| !! | AATAAAAATCTTTCTTCTTG+AGG | + | chr8_1:46449036-46449055 | None:intergenic | 20.0% |
| !!! | CTCTTTTTTCTTTAAGAAAT+TGG | - | chr8_1:46449506-46449525 | Msa1196760:CDS | 20.0% |
| !! | CATTTTTACACAGAAACAAA+GGG | - | chr8_1:46443828-46443847 | Msa1196760:three_prime_UTR | 25.0% |
| ! | ATTTAGAAGAAGAATGAAGT+TGG | - | chr8_1:46443939-46443958 | Msa1196760:three_prime_UTR | 25.0% |
| !!! | TAGAATGTTCATGTTTTGTT+TGG | - | chr8_1:46444689-46444708 | Msa1196760:CDS | 25.0% |
| !!! | GCATAATTTGTTGTAATCAT+TGG | - | chr8_1:46444711-46444730 | Msa1196760:CDS | 25.0% |
| ! | ACAAAAGATATTAAAGACAG+AGG | + | chr8_1:46444889-46444908 | None:intergenic | 25.0% |
| !!! | GCAATTCTGTTTAAAGTTTT+TGG | - | chr8_1:46445504-46445523 | Msa1196760:CDS | 25.0% |
| ! | TTGTCAAATAGAAGTTATAC+CGG | - | chr8_1:46445647-46445666 | Msa1196760:intron | 25.0% |
| ! | CTTCTTTGTGTTAAAATAGT+TGG | - | chr8_1:46445973-46445992 | Msa1196760:intron | 25.0% |
| !! | TGCTTTTATAAAGGAAAGAA+AGG | - | chr8_1:46446437-46446456 | Msa1196760:intron | 25.0% |
| ! | CATTTATAAAACGTACTTTC+AGG | + | chr8_1:46446559-46446578 | None:intergenic | 25.0% |
| !!! | CTGAAAGTACGTTTTATAAA+TGG | - | chr8_1:46446557-46446576 | Msa1196760:intron | 25.0% |
| ! | CTAACTCAACAATAGAAAAT+CGG | + | chr8_1:46446605-46446624 | None:intergenic | 25.0% |
| ! | TGACCAAACAAATCTTATAT+AGG | + | chr8_1:46446659-46446678 | None:intergenic | 25.0% |
| !!! | TGACTTATAAACACTTTTTC+AGG | + | chr8_1:46446773-46446792 | None:intergenic | 25.0% |
| !!! | AAAAAGTGTTTATAAGTCAG+AGG | - | chr8_1:46446774-46446793 | Msa1196760:intron | 25.0% |
| !! | TTTTTGCTTCTCTGTTAATA+TGG | - | chr8_1:46447052-46447071 | Msa1196760:intron | 25.0% |
| !!! | AATTCAGTGTTTGCTATTTT+TGG | - | chr8_1:46447110-46447129 | Msa1196760:intron | 25.0% |
| ! | TTAAACTCATGTAGTTTGAA+GGG | + | chr8_1:46447852-46447871 | None:intergenic | 25.0% |
| ! | ATTAAACTCATGTAGTTTGA+AGG | + | chr8_1:46447853-46447872 | None:intergenic | 25.0% |
| !!! | CAAATGTTTTTAATGATCTG+AGG | - | chr8_1:46447963-46447982 | Msa1196760:intron | 25.0% |
| !! | CAAACTATATTAAGAGGTAT+TGG | - | chr8_1:46448044-46448063 | Msa1196760:intron | 25.0% |
| ! | TTTACATCCCTGTTATTAAT+TGG | - | chr8_1:46448281-46448300 | Msa1196760:CDS | 25.0% |
| ! | TCAGAAACCAATTAATAACA+GGG | + | chr8_1:46448291-46448310 | None:intergenic | 25.0% |
| ! | ATCAGAAACCAATTAATAAC+AGG | + | chr8_1:46448292-46448311 | None:intergenic | 25.0% |
| ! | CATTTCATTTGTTCTATTTC+AGG | - | chr8_1:46448559-46448578 | Msa1196760:CDS | 25.0% |
| !!! | CACTAGTAATGCTTTTAATT+TGG | - | chr8_1:46448626-46448645 | Msa1196760:CDS | 25.0% |
| !!! | TTTTGTTTCCTACTTGTTTT+TGG | - | chr8_1:46448670-46448689 | Msa1196760:CDS | 25.0% |
| ! | AGTAAGAGAAAAAGTTTCAA+TGG | - | chr8_1:46448831-46448850 | Msa1196760:intron | 25.0% |
| ! | TAATTATCTGAAAGAATGCA+TGG | + | chr8_1:46449651-46449670 | None:intergenic | 25.0% |
| TCTGTGTAAAAATGGAACAT+TGG | + | chr8_1:46443822-46443841 | None:intergenic | 30.0% | |
| !! | CCTTTGTTTCTGTGTAAAAA+TGG | + | chr8_1:46443830-46443849 | None:intergenic | 30.0% |
| !! | CCATTTTTACACAGAAACAA+AGG | - | chr8_1:46443827-46443846 | Msa1196760:three_prime_UTR | 30.0% |
| AAGTTGGATAAGATTGAAGA+AGG | - | chr8_1:46443955-46443974 | Msa1196760:three_prime_UTR | 30.0% | |
| ! | GCTTGTTAAGAAACCTAAAA+GGG | - | chr8_1:46444122-46444141 | Msa1196760:CDS | 30.0% |
| GTTTATAAGTGTAACTCAGA+TGG | - | chr8_1:46444295-46444314 | Msa1196760:CDS | 30.0% | |
| TTTGAGAGAACTTATGAACA+CGG | - | chr8_1:46444426-46444445 | Msa1196760:CDS | 30.0% | |
| AATAAGCTGTTTATCCAAAC+AGG | - | chr8_1:46444617-46444636 | Msa1196760:CDS | 30.0% | |
| TGTAATCATTGGTATCCATA+AGG | - | chr8_1:46444722-46444741 | Msa1196760:CDS | 30.0% | |
| CTTTGAGTGACTGTTAAAAT+TGG | + | chr8_1:46444811-46444830 | None:intergenic | 30.0% | |
| AGTGTTAAATAAAGGTGAAG+TGG | + | chr8_1:46444850-46444869 | None:intergenic | 30.0% | |
| GTTCTCAAAGCTAATGATAA+CGG | - | chr8_1:46445125-46445144 | Msa1196760:intron | 30.0% | |
| ! | TATGTTGATTGCTTAACTGT+AGG | - | chr8_1:46445206-46445225 | Msa1196760:intron | 30.0% |
| !! | CGAAAGGGCTTTAAAAATAA+AGG | - | chr8_1:46445349-46445368 | Msa1196760:CDS | 30.0% |
| ! | AAATAAAGGAGACTTTGGAA+AGG | - | chr8_1:46445363-46445382 | Msa1196760:CDS | 30.0% |
| AATACCATCACCAATAATCA+TGG | + | chr8_1:46445438-46445457 | None:intergenic | 30.0% | |
| TTTATACCACATTATAGTGC+CGG | + | chr8_1:46445669-46445688 | None:intergenic | 30.0% | |
| ! | CTTTTATATGAACTACACTC+CGG | - | chr8_1:46445803-46445822 | Msa1196760:intron | 30.0% |
| ! | ATTTGTCATCTGAAATGGAT+AGG | + | chr8_1:46445850-46445869 | None:intergenic | 30.0% |
| AGTAGATTTGTCATCTGAAA+TGG | + | chr8_1:46445855-46445874 | None:intergenic | 30.0% | |
| TGTGTTAAAATAGTTGGAAG+TGG | - | chr8_1:46445979-46445998 | Msa1196760:intron | 30.0% | |
| AAGTGGTATGAAGTTAGTTA+AGG | - | chr8_1:46445996-46446015 | Msa1196760:intron | 30.0% | |
| AGATGAATGAATGTGTACAA+TGG | + | chr8_1:46446139-46446158 | None:intergenic | 30.0% | |
| !! | AAGCATAAGAGTATTGATGA+GGG | + | chr8_1:46446205-46446224 | None:intergenic | 30.0% |
| ! | CAGGATCAAATAAATGGATT+TGG | - | chr8_1:46446313-46446332 | Msa1196760:CDS | 30.0% |
| ! | CAAATAAATGGATTTGGTAC+AGG | - | chr8_1:46446319-46446338 | Msa1196760:CDS | 30.0% |
| !! | CAATAGAAAATCGGCTTTTA+AGG | + | chr8_1:46446596-46446615 | None:intergenic | 30.0% |
| ! | CGATTTTCTATTGTTGAGTT+AGG | - | chr8_1:46446603-46446622 | Msa1196760:intron | 30.0% |
| ! | AAAACCGGCTTAATTAGTAA+GGG | + | chr8_1:46446803-46446822 | None:intergenic | 30.0% |
| ! | TAAAACCGGCTTAATTAGTA+AGG | + | chr8_1:46446804-46446823 | None:intergenic | 30.0% |
| CTCAAGGATATAGTCAATTT+AGG | + | chr8_1:46446886-46446905 | None:intergenic | 30.0% | |
| CTAAATTGACTATATCCTTG+AGG | - | chr8_1:46446884-46446903 | Msa1196760:intron | 30.0% | |
| ! | CTTACTAGCTTAATGTACTT+TGG | - | chr8_1:46446939-46446958 | Msa1196760:intron | 30.0% |
| !!! | TATATCTATTTTAGTCCTCG+TGG | - | chr8_1:46447229-46447248 | Msa1196760:intron | 30.0% |
| AATACACTTGAATAAGAAGC+AGG | + | chr8_1:46447780-46447799 | None:intergenic | 30.0% | |
| TTTCAAAACACTATATCACC+TGG | + | chr8_1:46447816-46447835 | None:intergenic | 30.0% | |
| !!! | TGTTTTGAAACATCTAACCA+CGG | - | chr8_1:46447826-46447845 | Msa1196760:intron | 30.0% |
| TCATACCTCAAAAAAGTTCA+TGG | - | chr8_1:46448252-46448271 | Msa1196760:CDS | 30.0% | |
| CATACCTCAAAAAAGTTCAT+GGG | - | chr8_1:46448253-46448272 | Msa1196760:CDS | 30.0% | |
| ACAGATATTGCAAATGCATA+TGG | - | chr8_1:46448352-46448371 | Msa1196760:CDS | 30.0% | |
| ! | TTTCTCCATCACTATTTTCA+TGG | - | chr8_1:46448381-46448400 | Msa1196760:CDS | 30.0% |
| ATACTCCATGAAAATAGTGA+TGG | + | chr8_1:46448389-46448408 | None:intergenic | 30.0% | |
| AGGTGAAATCATGATATAGT+CGG | + | chr8_1:46448471-46448490 | None:intergenic | 30.0% | |
| TTATATAGCAATCCTATTCC+TGG | + | chr8_1:46448901-46448920 | None:intergenic | 30.0% | |
| AATGCAGACAAAAACTACAA+TGG | + | chr8_1:46448989-46449008 | None:intergenic | 30.0% | |
| CGGAACATATGATAATCTTT+CGG | + | chr8_1:46449072-46449091 | None:intergenic | 30.0% | |
| TCTTGAGAAATTCTTGAGAA+GGG | - | chr8_1:46449167-46449186 | Msa1196760:intron | 30.0% | |
| ! | CTGAATCAGTTTTCACAAGT+GGG | - | chr8_1:46443910-46443929 | Msa1196760:three_prime_UTR | 35.0% |
| ! | TTGATGGAAGTGAAGTTGAT+TGG | - | chr8_1:46444031-46444050 | Msa1196760:CDS | 35.0% |
| ! | TGATGGAAGTGAAGTTGATT+GGG | - | chr8_1:46444032-46444051 | Msa1196760:CDS | 35.0% |
| !! | GGCTTGTTAAGAAACCTAAA+AGG | - | chr8_1:46444121-46444140 | Msa1196760:CDS | 35.0% |
| ! | TCAAAAGAGTCAACCCTTTT+AGG | + | chr8_1:46444138-46444157 | None:intergenic | 35.0% |
| ! | CTCTTTTGATGTTGAAGCTA+TGG | - | chr8_1:46444149-46444168 | Msa1196760:CDS | 35.0% |
| TAACTCAGATGGTATTAGAC+CGG | - | chr8_1:46444306-46444325 | Msa1196760:CDS | 35.0% | |
| ACTACTTTCTTCGATCCTTA+TGG | + | chr8_1:46444740-46444759 | None:intergenic | 35.0% | |
| ATAAGGATCGAAGAAAGTAG+TGG | - | chr8_1:46444739-46444758 | Msa1196760:CDS | 35.0% | |
| ACTGTTAAAATTGGCGAAGT+GGG | + | chr8_1:46444802-46444821 | None:intergenic | 35.0% | |
| AGGTGAAGTGGAATAAAACA+TGG | + | chr8_1:46444838-46444857 | None:intergenic | 35.0% | |
| ! | CTTTTGTGCTTATGTGAATC+AGG | - | chr8_1:46444902-46444921 | Msa1196760:CDS | 35.0% |
| TAATGCAATGGTAGGCAAAA+GGG | + | chr8_1:46444934-46444953 | None:intergenic | 35.0% | |
| TGAAATGCTAATGCAATGGT+AGG | + | chr8_1:46444942-46444961 | None:intergenic | 35.0% | |
| ! | AGTCTGAAATGCTAATGCAA+TGG | + | chr8_1:46444946-46444965 | None:intergenic | 35.0% |
| !! | AGTCCTCTTTATGTTTTTGC+TGG | - | chr8_1:46444996-46445015 | Msa1196760:CDS | 35.0% |
| ACACCAGCAAAAACATAAAG+AGG | + | chr8_1:46445002-46445021 | None:intergenic | 35.0% | |
| ACATCGTCATCTGAGTTAAT+AGG | + | chr8_1:46445038-46445057 | None:intergenic | 35.0% | |
| !! | AAAGCTAATGATAACGGAGA+AGG | - | chr8_1:46445131-46445150 | Msa1196760:intron | 35.0% |
| ! | AGATTTGTTCATCAGCTTGT+TGG | + | chr8_1:46445295-46445314 | None:intergenic | 35.0% |
| ! | GAAAAACGTGTTGTTAGTGT+TGG | - | chr8_1:46445397-46445416 | Msa1196760:CDS | 35.0% |
| !! | TTGTTAGTGTTGGTTCTTCT+TGG | - | chr8_1:46445407-46445426 | Msa1196760:CDS | 35.0% |
| CTTGGAACTTCCATGATTAT+TGG | - | chr8_1:46445425-46445444 | Msa1196760:CDS | 35.0% | |
| ACTTCCATGATTATTGGTGA+TGG | - | chr8_1:46445431-46445450 | Msa1196760:CDS | 35.0% | |
| TTCTTGTGTCTTCTATATGC+TGG | - | chr8_1:46445529-46445548 | Msa1196760:intron | 35.0% | |
| TGTGAGTGCTAAAATTGGTA+TGG | + | chr8_1:46445596-46445615 | None:intergenic | 35.0% | |
| !! | ATACCAATTTTAGCACTCAC+AGG | - | chr8_1:46445595-46445614 | Msa1196760:intron | 35.0% |
| TTGTCGAATAGAAGCTATTG+TGG | - | chr8_1:46445692-46445711 | Msa1196760:intron | 35.0% | |
| TTAGTTTCGTCCTCATTGAT+GGG | + | chr8_1:46445746-46445765 | None:intergenic | 35.0% | |
| CGGAGTGTAGTTCATATAAA+AGG | + | chr8_1:46445805-46445824 | None:intergenic | 35.0% | |
| AAGCAAAGTGACAATTGAAC+CGG | + | chr8_1:46445825-46445844 | None:intergenic | 35.0% | |
| ATGTACCTTAAGTATAACCG+TGG | - | chr8_1:46445948-46445967 | Msa1196760:intron | 35.0% | |
| !! | TTTAACACAAAGAAGCACCA+CGG | + | chr8_1:46445968-46445987 | None:intergenic | 35.0% |
| CTAAACTAGAGTTAGTAGCA+TGG | - | chr8_1:46446061-46446080 | Msa1196760:CDS | 35.0% | |
| !! | CAAGCATAAGAGTATTGATG+AGG | + | chr8_1:46446206-46446225 | None:intergenic | 35.0% |
| TTCATAGGGATGAAGATCAT+AGG | + | chr8_1:46446243-46446262 | None:intergenic | 35.0% | |
| GGTCTACAGGATCAAATAAA+TGG | - | chr8_1:46446307-46446326 | Msa1196760:CDS | 35.0% | |
| !! | GTGTCTGCTTGCTTTTATAA+AGG | - | chr8_1:46446428-46446447 | Msa1196760:intron | 35.0% |
| TTCATTTCTCCATCGAGATT+TGG | + | chr8_1:46446485-46446504 | None:intergenic | 35.0% | |
| AGACACTCAACATTGTCAAA+AGG | + | chr8_1:46446515-46446534 | None:intergenic | 35.0% | |
| CTTACACTAGTTGTGAGATA+TGG | - | chr8_1:46446533-46446552 | Msa1196760:intron | 35.0% | |
| !!! | AAAATCGGCTTTTAAGGTGA+GGG | + | chr8_1:46446590-46446609 | None:intergenic | 35.0% |
| ! | GGGCCTATATAAGATTTGTT+TGG | - | chr8_1:46446653-46446672 | Msa1196760:intron | 35.0% |
| GTCCCACATTAAATGAGATA+TGG | - | chr8_1:46446747-46446766 | Msa1196760:intron | 35.0% | |
| GGCCATATCTCATTTAATGT+GGG | + | chr8_1:46446752-46446771 | None:intergenic | 35.0% | |
| AGGCCATATCTCATTTAATG+TGG | + | chr8_1:46446753-46446772 | None:intergenic | 35.0% | |
| CTAACTCAACGCTATAAAAC+CGG | + | chr8_1:46446818-46446837 | None:intergenic | 35.0% | |
| ! | TTAATGTACTTTGGCTCAGT+AGG | - | chr8_1:46446948-46446967 | Msa1196760:intron | 35.0% |
| TTGTTCAGCATTCAACAGTT+CGG | - | chr8_1:46447254-46447273 | Msa1196760:intron | 35.0% | |
| AGAACCATAAAGCAAGTACA+GGG | + | chr8_1:46447307-46447326 | None:intergenic | 35.0% | |
| AAGAACCATAAAGCAAGTAC+AGG | + | chr8_1:46447308-46447327 | None:intergenic | 35.0% | |
| ! | TGCTTTATGGTTCTTTTCTC+TGG | - | chr8_1:46447313-46447332 | Msa1196760:intron | 35.0% |
| ! | GCTTTATGGTTCTTTTCTCT+GGG | - | chr8_1:46447314-46447333 | Msa1196760:intron | 35.0% |
| ! | TTCTTTTCTCTGGGTTCTAT+TGG | - | chr8_1:46447323-46447342 | Msa1196760:CDS | 35.0% |
| ! | AGAATAATGGCAAAAGTGCA+TGG | - | chr8_1:46447420-46447439 | Msa1196760:intron | 35.0% |
| AGCGATGAAAATGAGAAAAG+AGG | + | chr8_1:46447485-46447504 | None:intergenic | 35.0% | |
| CATGTCAATTACGATGCTTA+CGG | + | chr8_1:46447513-46447532 | None:intergenic | 35.0% | |
| ! | TTTTACTGTACCAGCAATAC+AGG | - | chr8_1:46447577-46447596 | Msa1196760:intron | 35.0% |
| ! | TTTTCATCAGAAAAGCAGCT+TGG | + | chr8_1:46447755-46447774 | None:intergenic | 35.0% |
| GTATTCTTCAAATCTGTTCC+AGG | - | chr8_1:46447795-46447814 | Msa1196760:intron | 35.0% | |
| AGTGTAGCTATAACAAACAC+TGG | + | chr8_1:46448136-46448155 | None:intergenic | 35.0% | |
| !! | GTGTTTGTTATAGCTACACT+TGG | - | chr8_1:46448136-46448155 | Msa1196760:intron | 35.0% |
| GTTAAGCAATCAATGGCTTT+GGG | - | chr8_1:46448205-46448224 | Msa1196760:CDS | 35.0% | |
| TATGAATTATCTTGAGCCTG+GGG | + | chr8_1:46448237-46448256 | None:intergenic | 35.0% | |
| GTATGAATTATCTTGAGCCT+GGG | + | chr8_1:46448238-46448257 | None:intergenic | 35.0% | |
| !!! | TTGACCCATGAACTTTTTTG+AGG | + | chr8_1:46448260-46448279 | None:intergenic | 35.0% |
| TTGCAATATCTGTAGTGCTT+TGG | + | chr8_1:46448345-46448364 | None:intergenic | 35.0% | |
| ! | AGTCCTATCGAAAATTTTCG+AGG | - | chr8_1:46448720-46448739 | Msa1196760:intron | 35.0% |
| ! | GTCCTATCGAAAATTTTCGA+GGG | - | chr8_1:46448721-46448740 | Msa1196760:intron | 35.0% |
| ATAGTTCCACGTATACATCA+CGG | + | chr8_1:46448785-46448804 | None:intergenic | 35.0% | |
| TGATGTATACGTGGAACTAT+GGG | - | chr8_1:46448785-46448804 | Msa1196760:intron | 35.0% | |
| ! | CTTTTTCTCTTACTTCCCTT+CGG | + | chr8_1:46448825-46448844 | None:intergenic | 35.0% |
| ATGGACTTAATGCTTGATCT+TGG | - | chr8_1:46448850-46448869 | Msa1196760:intron | 35.0% | |
| TACTCTTACTGTTCCAAGAT+TGG | + | chr8_1:46448878-46448897 | None:intergenic | 35.0% | |
| CTATATAATGAGCTTGTCCA+AGG | - | chr8_1:46448913-46448932 | Msa1196760:intron | 35.0% | |
| TAAATATGTTCCGATTCCTG+TGG | - | chr8_1:46449008-46449027 | Msa1196760:intron | 35.0% | |
| AATCTTTCGGACATACTCTT+CGG | + | chr8_1:46449059-46449078 | None:intergenic | 35.0% | |
| TAAGAAGTTGCTCAAATGCA+TGG | + | chr8_1:46449140-46449159 | None:intergenic | 35.0% | |
| TGCATTTGAGCAACTTCTTA+TGG | - | chr8_1:46449140-46449159 | Msa1196760:intron | 35.0% | |
| GTCTTGAGAAATTCTTGAGA+AGG | - | chr8_1:46449166-46449185 | Msa1196760:intron | 35.0% | |
| AAATTCTGACCATGCAATAG+TGG | + | chr8_1:46449312-46449331 | None:intergenic | 35.0% | |
| GGTCAGAATTTAGAAGAAAC+AGG | - | chr8_1:46449321-46449340 | Msa1196760:intron | 35.0% | |
| ! | TTTCTAAGAAAGAACTGCAG+AGG | - | chr8_1:46449549-46449568 | Msa1196760:CDS | 35.0% |
| ACTTGAATGATATTGGTGTG+AGG | + | chr8_1:46449597-46449616 | None:intergenic | 35.0% | |
| TCACACCAATATCATTCAAG+TGG | - | chr8_1:46449596-46449615 | Msa1196760:CDS | 35.0% | |
| CACACCAATATCATTCAAGT+GGG | - | chr8_1:46449597-46449616 | Msa1196760:CDS | 35.0% | |
| ACACCAATATCATTCAAGTG+GGG | - | chr8_1:46449598-46449617 | Msa1196760:CDS | 35.0% | |
| ! | TTTTTACCAATCATCGCTGA+CGG | + | chr8_1:46449733-46449752 | None:intergenic | 35.0% |
| ! | GCTGAATCAGTTTTCACAAG+TGG | - | chr8_1:46443909-46443928 | Msa1196760:three_prime_UTR | 40.0% |
| ! | AGATTGAAGAAGGAAGTGTG+AGG | - | chr8_1:46443965-46443984 | Msa1196760:three_prime_UTR | 40.0% |
| ATGGAAGTGATGGTAGAGAA+GGG | - | chr8_1:46444079-46444098 | Msa1196760:CDS | 40.0% | |
| ! | GAGAAGGGTATGGTTCAATT+AGG | - | chr8_1:46444094-46444113 | Msa1196760:CDS | 40.0% |
| GGTATGGTTCAATTAGGAGA+AGG | - | chr8_1:46444100-46444119 | Msa1196760:CDS | 40.0% | |
| AACTCAGATGGTATTAGACC+GGG | - | chr8_1:46444307-46444326 | Msa1196760:CDS | 40.0% | |
| AAACCATCTTCTCCACACTT+AGG | - | chr8_1:46444359-46444378 | Msa1196760:CDS | 40.0% | |
| AACCATCTTCTCCACACTTA+GGG | - | chr8_1:46444360-46444379 | Msa1196760:CDS | 40.0% | |
| CGTGTGTGAATTTCGCTATT+AGG | - | chr8_1:46444647-46444666 | Msa1196760:CDS | 40.0% | |
| ! | CATGAAGCATTACAATGCAG+AGG | - | chr8_1:46444766-46444785 | Msa1196760:CDS | 40.0% |
| GACTGTTAAAATTGGCGAAG+TGG | + | chr8_1:46444803-46444822 | None:intergenic | 40.0% | |
| CTAATGCAATGGTAGGCAAA+AGG | + | chr8_1:46444935-46444954 | None:intergenic | 40.0% | |
| GCATTAGCATTTCAGACTCT+TGG | - | chr8_1:46444948-46444967 | Msa1196760:CDS | 40.0% | |
| !! | CAGACTCTTGGTGTTGTATA+TGG | - | chr8_1:46444960-46444979 | Msa1196760:CDS | 40.0% |
| !! | TGGTGTTGTATATGGTGACA+TGG | - | chr8_1:46444968-46444987 | Msa1196760:CDS | 40.0% |
| ! | GGTGTTGTATATGGTGACAT+GGG | - | chr8_1:46444969-46444988 | Msa1196760:CDS | 40.0% |
| TAACTCAGATGACGATGTCT+TGG | - | chr8_1:46445040-46445059 | Msa1196760:CDS | 40.0% | |
| AACTCAGATGACGATGTCTT+GGG | - | chr8_1:46445041-46445060 | Msa1196760:CDS | 40.0% | |
| GTTGATTGCTTAACTGTAGG+AGG | - | chr8_1:46445209-46445228 | Msa1196760:intron | 40.0% | |
| !! | TTTAAAGCCCTTTCGAGTTC+TGG | + | chr8_1:46445344-46445363 | None:intergenic | 40.0% |
| ATTCTAACTCCAGCGATATC+AGG | - | chr8_1:46445455-46445474 | Msa1196760:CDS | 40.0% | |
| GTTATACCGGCACTATAATG+TGG | - | chr8_1:46445660-46445679 | Msa1196760:intron | 40.0% | |
| CTATTGTGGCACCTAATTTC+TGG | - | chr8_1:46445706-46445725 | Msa1196760:intron | 40.0% | |
| ! | CGCTTTTAGTGCCAGAAATT+AGG | + | chr8_1:46445720-46445739 | None:intergenic | 40.0% |
| ! | GTTAGTTTCGTCCTCATTGA+TGG | + | chr8_1:46445747-46445766 | None:intergenic | 40.0% |
| AAGCACCACGGTTATACTTA+AGG | + | chr8_1:46445956-46445975 | None:intergenic | 40.0% | |
| TTGATCCTGTAGACCACTTA+TGG | + | chr8_1:46446302-46446321 | None:intergenic | 40.0% | |
| ! | TCAAAGTGTCCAAATCTCGA+TGG | - | chr8_1:46446473-46446492 | Msa1196760:intron | 40.0% |
| !!! | GAAAATCGGCTTTTAAGGTG+AGG | + | chr8_1:46446591-46446610 | None:intergenic | 40.0% |
| GCATCCCTTACTAATTAAGC+CGG | - | chr8_1:46446796-46446815 | Msa1196760:intron | 40.0% | |
| !! | CGGTTTTATAGCGTTGAGTT+AGG | - | chr8_1:46446816-46446835 | Msa1196760:intron | 40.0% |
| GAGATCTCAAAGATCTTGCA+GGG | + | chr8_1:46446917-46446936 | None:intergenic | 40.0% | |
| TGAGATCTCAAAGATCTTGC+AGG | + | chr8_1:46446918-46446937 | None:intergenic | 40.0% | |
| ! | TGTTTTACTTGCAGCTGAAG+TGG | - | chr8_1:46447202-46447221 | Msa1196760:intron | 40.0% |
| GAACCATAAAGCAAGTACAG+GGG | + | chr8_1:46447306-46447325 | None:intergenic | 40.0% | |
| GAAGCAATGTTTGCAGATCT+TGG | - | chr8_1:46447551-46447570 | Msa1196760:intron | 40.0% | |
| GATTCACAAACCTGTATTGC+TGG | + | chr8_1:46447590-46447609 | None:intergenic | 40.0% | |
| ACAGATTGCTTTCACTTGTG+TGG | - | chr8_1:46447698-46447717 | Msa1196760:intron | 40.0% | |
| ATATAAGCAAGGAGGAGACA+TGG | + | chr8_1:46447729-46447748 | None:intergenic | 40.0% | |
| ATGTCTCCTCCTTGCTTATA+TGG | - | chr8_1:46447728-46447747 | Msa1196760:intron | 40.0% | |
| TGTCTCCTCCTTGCTTATAT+GGG | - | chr8_1:46447729-46447748 | Msa1196760:intron | 40.0% | |
| AAAAATCTTCACACCGACAG+TGG | - | chr8_1:46448007-46448026 | Msa1196760:intron | 40.0% | |
| ! | GTTGAACAGAGAGTCTTTTC+TGG | - | chr8_1:46448110-46448129 | Msa1196760:intron | 40.0% |
| TTCGTGCGTTAAGCAATCAA+TGG | - | chr8_1:46448198-46448217 | Msa1196760:CDS | 40.0% | |
| CGTTAAGCAATCAATGGCTT+TGG | - | chr8_1:46448204-46448223 | Msa1196760:CDS | 40.0% | |
| GGTATGAATTATCTTGAGCC+TGG | + | chr8_1:46448239-46448258 | None:intergenic | 40.0% | |
| !! | ATCTGTAGTGCTTTGGAAGA+TGG | + | chr8_1:46448338-46448357 | None:intergenic | 40.0% |
| !! | ATGGTTCTAAGGTGACAACT+AGG | - | chr8_1:46448426-46448445 | Msa1196760:intron | 40.0% |
| ! | ATTTCAGGCATTGCTGAAGT+TGG | - | chr8_1:46448574-46448593 | Msa1196760:CDS | 40.0% |
| AAGCATTACTAGTGTCACCA+AGG | + | chr8_1:46448620-46448639 | None:intergenic | 40.0% | |
| CCACAGAACCAAAAACAAGT+AGG | + | chr8_1:46448681-46448700 | None:intergenic | 40.0% | |
| !!! | CCTACTTGTTTTTGGTTCTG+TGG | - | chr8_1:46448678-46448697 | Msa1196760:CDS | 40.0% |
| ! | CACCCTCGAAAATTTTCGAT+AGG | + | chr8_1:46448726-46448745 | None:intergenic | 40.0% |
| !! | CTATCGAAAATTTTCGAGGG+TGG | - | chr8_1:46448724-46448743 | Msa1196760:intron | 40.0% |
| ATACATCACGGAGAGGAAAA+AGG | + | chr8_1:46448773-46448792 | None:intergenic | 40.0% | |
| GTGATGTATACGTGGAACTA+TGG | - | chr8_1:46448784-46448803 | Msa1196760:intron | 40.0% | |
| CTTGATCTTGGTTCCAATCT+TGG | - | chr8_1:46448862-46448881 | Msa1196760:intron | 40.0% | |
| !! | ACAGTAAGAGTACCAGGAAT+AGG | - | chr8_1:46448886-46448905 | Msa1196760:intron | 40.0% |
| TAGAAGGAACTGCAGGAAAA+TGG | + | chr8_1:46448947-46448966 | None:intergenic | 40.0% | |
| ACTACAATGGAATGAAGAGC+TGG | + | chr8_1:46448976-46448995 | None:intergenic | 40.0% | |
| TTGGAGGGTAACTTAACTGA+TGG | - | chr8_1:46449213-46449232 | Msa1196760:intron | 40.0% | |
| AGAATTTCTTGTATCCACCG+AGG | + | chr8_1:46449250-46449269 | None:intergenic | 40.0% | |
| CTTAGGATTCCACTATTGCA+TGG | - | chr8_1:46449300-46449319 | Msa1196760:intron | 40.0% | |
| ACCATCGAGTTATATGTCGT+CGG | - | chr8_1:46449380-46449399 | Msa1196760:intron | 40.0% | |
| GAAAGCTCGTATTCTAGACT+AGG | + | chr8_1:46449414-46449433 | None:intergenic | 40.0% | |
| TTCAGCTCTTAGAGAAGCAA+TGG | - | chr8_1:46449431-46449450 | Msa1196760:intron | 40.0% | |
| ! | CTTAGAGAAGCAATGGATTC+AGG | - | chr8_1:46449438-46449457 | Msa1196760:intron | 40.0% |
| TCAGGATTCACCTATTTGCT+TGG | - | chr8_1:46449456-46449475 | Msa1196760:CDS | 40.0% | |
| TTCACCTATTTGCTTGGACA+TGG | - | chr8_1:46449462-46449481 | Msa1196760:CDS | 40.0% | |
| ATCTCCATGTCCAAGCAAAT+AGG | + | chr8_1:46449469-46449488 | None:intergenic | 40.0% | |
| CATCCCCACTTGAATGATAT+TGG | + | chr8_1:46449604-46449623 | None:intergenic | 40.0% | |
| TCAAGTGGGGATGACATATA+TGG | - | chr8_1:46449611-46449630 | Msa1196760:CDS | 40.0% | |
| ! | TTTTACCAATCATCGCTGAC+GGG | + | chr8_1:46449732-46449751 | None:intergenic | 40.0% |
| ! | AGAAGGAAGTGTGAGGTTGT+TGG | - | chr8_1:46443972-46443991 | Msa1196760:three_prime_UTR | 45.0% |
| ! | GAAGGAAGTGTGAGGTTGTT+GGG | - | chr8_1:46443973-46443992 | Msa1196760:three_prime_UTR | 45.0% |
| ATTGGGATGAAGATCCTCCA+TGG | - | chr8_1:46444049-46444068 | Msa1196760:CDS | 45.0% | |
| TCACTTCCATGATGAGACCA+TGG | + | chr8_1:46444069-46444088 | None:intergenic | 45.0% | |
| TGGTCTCATCATGGAAGTGA+TGG | - | chr8_1:46444069-46444088 | Msa1196760:CDS | 45.0% | |
| CATGGAAGTGATGGTAGAGA+AGG | - | chr8_1:46444078-46444097 | Msa1196760:CDS | 45.0% | |
| AGTGATGGTAGAGAAGGGTA+TGG | - | chr8_1:46444084-46444103 | Msa1196760:CDS | 45.0% | |
| TGGTCATGATCAACACTCCA+AGG | - | chr8_1:46444182-46444201 | Msa1196760:CDS | 45.0% | |
| ACTCAGATGGTATTAGACCG+GGG | - | chr8_1:46444308-46444327 | Msa1196760:CDS | 45.0% | |
| ATCCAAACATGCCCTAAGTG+TGG | + | chr8_1:46444374-46444393 | None:intergenic | 45.0% | |
| CACTTAGGGCATGTTTGGAT+TGG | - | chr8_1:46444374-46444393 | Msa1196760:CDS | 45.0% | |
| GCGAAATTCACACACGCTAA+GGG | + | chr8_1:46444643-46444662 | None:intergenic | 45.0% | |
| AGCGAAATTCACACACGCTA+AGG | + | chr8_1:46444644-46444663 | None:intergenic | 45.0% | |
| CAATGGTAGGCAAAAGGGAA+AGG | + | chr8_1:46444929-46444948 | None:intergenic | 45.0% | |
| ! | TTTTGCTGGTGTCTTCAGCA+AGG | - | chr8_1:46445010-46445029 | Msa1196760:CDS | 45.0% |
| !! | TCATCAGCTTGTTGGCGATT+CGG | + | chr8_1:46445287-46445306 | None:intergenic | 45.0% |
| GCTTATGTACCTGATATCGC+TGG | + | chr8_1:46445467-46445486 | None:intergenic | 45.0% | |
| GTGCCTGTGAGTGCTAAAAT+TGG | + | chr8_1:46445601-46445620 | None:intergenic | 45.0% | |
| CATGCTCAAGACTAGACATC+TGG | + | chr8_1:46446710-46446729 | None:intergenic | 45.0% | |
| !! | TTGCAGGGATTTTGACCTCA+AGG | + | chr8_1:46446902-46446921 | None:intergenic | 45.0% |
| AGTAGGTCGACTATGGTTGA+TGG | - | chr8_1:46446965-46446984 | Msa1196760:intron | 45.0% | |
| AGCATTCAACAGTTCGGTAC+TGG | - | chr8_1:46447260-46447279 | Msa1196760:intron | 45.0% | |
| ! | AAAAGTGCATGGTCAGCTCT+TGG | - | chr8_1:46447431-46447450 | Msa1196760:intron | 45.0% |
| GGTTGTGTTCTGTGCATTAC+AGG | - | chr8_1:46447455-46447474 | Msa1196760:intron | 45.0% | |
| ATTGACATGCATTCTCGTGC+AGG | - | chr8_1:46447524-46447543 | Msa1196760:intron | 45.0% | |
| GACAACTAGGATGCTTGCAA+AGG | - | chr8_1:46448439-46448458 | Msa1196760:intron | 45.0% | |
| !! | TGCTGAAGTTGGTGTGATGA+TGG | - | chr8_1:46448585-46448604 | Msa1196760:CDS | 45.0% |
| CATTACTAGTGTCACCAAGG+TGG | + | chr8_1:46448617-46448636 | None:intergenic | 45.0% | |
| !! | GAGTGTCTTGAAGTACCGAA+GGG | - | chr8_1:46448807-46448826 | Msa1196760:intron | 45.0% |
| !! | CTTGGAACAGTAAGAGTACC+AGG | - | chr8_1:46448880-46448899 | Msa1196760:intron | 45.0% |
| AGGAACTGCAGGAAAATGGA+GGG | + | chr8_1:46448943-46448962 | None:intergenic | 45.0% | |
| AAGGAACTGCAGGAAAATGG+AGG | + | chr8_1:46448944-46448963 | None:intergenic | 45.0% | |
| CAATGGAATGAAGAGCTGGA+AGG | + | chr8_1:46448972-46448991 | None:intergenic | 45.0% | |
| TCTTGAGGAACCACAGGAAT+CGG | + | chr8_1:46449021-46449040 | None:intergenic | 45.0% | |
| CTTTCTTCTTGAGGAACCAC+AGG | + | chr8_1:46449027-46449046 | None:intergenic | 45.0% | |
| ! | ATATGTTCCGCTGTGTTGCT+AGG | - | chr8_1:46449082-46449101 | Msa1196760:intron | 45.0% |
| GGTACGGTTACAAAGACGTT+CGG | - | chr8_1:46449103-46449122 | Msa1196760:intron | 45.0% | |
| ! | GGGTAACTTAACTGATGGTG+TGG | - | chr8_1:46449218-46449237 | Msa1196760:intron | 45.0% |
| ATTTCTTGTATCCACCGAGG+CGG | + | chr8_1:46449247-46449266 | None:intergenic | 45.0% | |
| TCTGATCTTGCAGCCAGTAA+TGG | - | chr8_1:46449267-46449286 | Msa1196760:intron | 45.0% | |
| AAGCTCTTCTGCTCCATTAC+TGG | + | chr8_1:46449283-46449302 | None:intergenic | 45.0% | |
| ! | GTAATGGAGCAGAAGAGCTT+AGG | - | chr8_1:46449283-46449302 | Msa1196760:intron | 45.0% |
| GGAACTTCTACCTCACATGA+AGG | - | chr8_1:46449342-46449361 | Msa1196760:intron | 45.0% | |
| TCCGACGACATATAACTCGA+TGG | + | chr8_1:46449384-46449403 | None:intergenic | 45.0% | |
| CTAAGAAAGAACTGCAGAGG+AGG | - | chr8_1:46449552-46449571 | Msa1196760:CDS | 45.0% | |
| !! | TTTATATAATTTATTTATTG+AGG | - | chr8_1:46444211-46444230 | Msa1196760:CDS | 5.0% |
| AGGTTGTTGGGAAGTAGCAG+TGG | - | chr8_1:46443985-46444004 | Msa1196760:three_prime_UTR | 50.0% | |
| TTGTTGGGAAGTAGCAGTGG+TGG | - | chr8_1:46443988-46444007 | Msa1196760:three_prime_UTR | 50.0% | |
| TGTTGGGAAGTAGCAGTGGT+GGG | - | chr8_1:46443989-46444008 | Msa1196760:three_prime_UTR | 50.0% | |
| TGGGAGTAGTGAGTCTAGGT+GGG | - | chr8_1:46444008-46444027 | Msa1196760:exon | 50.0% | |
| !! | AGTGAGTCTAGGTGGGTTGA+TGG | - | chr8_1:46444015-46444034 | Msa1196760:exon | 50.0% |
| GATCCTCCATGGTCTCATCA+TGG | - | chr8_1:46444060-46444079 | Msa1196760:CDS | 50.0% | |
| CTTCCATGATGAGACCATGG+AGG | + | chr8_1:46444066-46444085 | None:intergenic | 50.0% | |
| GAAGCTATGGAGATTGCTGC+TGG | - | chr8_1:46444162-46444181 | Msa1196760:CDS | 50.0% | |
| TGCCCTAAGTGTGGAGAAGA+TGG | + | chr8_1:46444365-46444384 | None:intergenic | 50.0% | |
| CTCCACACTTAGGGCATGTT+TGG | - | chr8_1:46444369-46444388 | Msa1196760:CDS | 50.0% | |
| !! | CGCTGTACTCGCTGATTTGT+AGG | - | chr8_1:46445240-46445259 | Msa1196760:intron | 50.0% |
| TTCCTACGCCAGAACTCGAA+AGG | - | chr8_1:46445333-46445352 | Msa1196760:CDS | 50.0% | |
| TCCTACGCCAGAACTCGAAA+GGG | - | chr8_1:46445334-46445353 | Msa1196760:CDS | 50.0% | |
| !! | AAAAGCGCCACCCATCAATG+AGG | - | chr8_1:46445733-46445752 | Msa1196760:intron | 50.0% |
| GTTTCGTCCTCATTGATGGG+TGG | + | chr8_1:46445743-46445762 | None:intergenic | 50.0% | |
| ACCATACCAAGTCTCCTCTG+TGG | - | chr8_1:46445765-46445784 | Msa1196760:intron | 50.0% | |
| CCATACCAAGTCTCCTCTGT+GGG | - | chr8_1:46445766-46445785 | Msa1196760:intron | 50.0% | |
| CATACCAAGTCTCCTCTGTG+GGG | - | chr8_1:46445767-46445786 | Msa1196760:intron | 50.0% | |
| GCAGTGATGTCTGCCATAAG+TGG | - | chr8_1:46446286-46446305 | Msa1196760:CDS | 50.0% | |
| GTCTGCCATAAGTGGTCTAC+AGG | - | chr8_1:46446294-46446313 | Msa1196760:CDS | 50.0% | |
| TTGGCTCAGTAGGTCGACTA+TGG | - | chr8_1:46446958-46446977 | Msa1196760:intron | 50.0% | |
| GAATGCTGAACAAAGCCACG+AGG | + | chr8_1:46447247-46447266 | None:intergenic | 50.0% | |
| !! | ACAGTTCGGTACTGGCAAAG+TGG | - | chr8_1:46447268-46447287 | Msa1196760:intron | 50.0% |
| !! | CAGTTCGGTACTGGCAAAGT+GGG | - | chr8_1:46447269-46447288 | Msa1196760:intron | 50.0% |
| TCGCCCCTGTACTTGCTTTA+TGG | - | chr8_1:46447300-46447319 | Msa1196760:intron | 50.0% | |
| CTTGGCCCATATAAGCAAGG+AGG | + | chr8_1:46447737-46447756 | None:intergenic | 50.0% | |
| CAGCTTGGCCCATATAAGCA+AGG | + | chr8_1:46447740-46447759 | None:intergenic | 50.0% | |
| TCATGTAGTTTGAAGGGCCG+TGG | + | chr8_1:46447846-46447865 | None:intergenic | 50.0% | |
| CAACACAGAGCACAAACAGC+AGG | + | chr8_1:46448094-46448113 | None:intergenic | 50.0% | |
| ! | GATGATGGTTAGCACCACCT+TGG | - | chr8_1:46448600-46448619 | Msa1196760:CDS | 50.0% |
| !! | CGAAAATTTTCGAGGGTGGC+TGG | - | chr8_1:46448728-46448747 | Msa1196760:intron | 50.0% |
| TCCTCTCCGTGATGTATACG+TGG | - | chr8_1:46448776-46448795 | Msa1196760:intron | 50.0% | |
| TCCACGTATACATCACGGAG+AGG | + | chr8_1:46448780-46448799 | None:intergenic | 50.0% | |
| !! | GGAGTGTCTTGAAGTACCGA+AGG | - | chr8_1:46448806-46448825 | Msa1196760:intron | 50.0% |
| GGAAAATGGAGGGAACACCT+TGG | + | chr8_1:46448933-46448952 | None:intergenic | 50.0% | |
| GAAGGCTTAGAAGGAACTGC+AGG | + | chr8_1:46448954-46448973 | None:intergenic | 50.0% | |
| GAAGAGCTGGAAGGCTTAGA+AGG | + | chr8_1:46448963-46448982 | None:intergenic | 50.0% | |
| ! | TTCCGCTGTGTTGCTAGGTA+CGG | - | chr8_1:46449087-46449106 | Msa1196760:intron | 50.0% |
| AACCGTACCTAGCAACACAG+CGG | + | chr8_1:46449092-46449111 | None:intergenic | 50.0% | |
| CGGTTACAAAGACGTTCGGA+AGG | - | chr8_1:46449107-46449126 | Msa1196760:intron | 50.0% | |
| GTTAGAAGCTGCGTTGGAGT+TGG | - | chr8_1:46449194-46449213 | Msa1196760:intron | 50.0% | |
| TGTTGACGCACCTTCATGTG+AGG | + | chr8_1:46449355-46449374 | None:intergenic | 50.0% | |
| ! | CTTTTCCCGTCAGCGATGAT+TGG | - | chr8_1:46449724-46449743 | Msa1196760:five_prime_UTR | 50.0% |
| ! | GTGGTGGGAGTAGTGAGTCT+AGG | - | chr8_1:46444004-46444023 | Msa1196760:exon | 55.0% |
| GTGGGAGTAGTGAGTCTAGG+TGG | - | chr8_1:46444007-46444026 | Msa1196760:exon | 55.0% | |
| CCAAGCACGTCAAATGTCCC+CGG | + | chr8_1:46444328-46444347 | None:intergenic | 55.0% | |
| CGGGGACATTTGACGTGCTT+GGG | - | chr8_1:46444326-46444345 | Msa1196760:CDS | 55.0% | |
| ACACACGCTAAGGGCCTGTT+TGG | + | chr8_1:46444634-46444653 | None:intergenic | 55.0% | |
| ! | CCCACAGAGGAGACTTGGTA+TGG | + | chr8_1:46445769-46445788 | None:intergenic | 55.0% |
| CACATGCTGTCAGACCTCTC+AGG | - | chr8_1:46446677-46446696 | Msa1196760:intron | 55.0% | |
| AGTGCATGGTCAGCTCTTGG+TGG | - | chr8_1:46447434-46447453 | Msa1196760:intron | 55.0% | |
| !! | GGAAGCGTTAGAAGCTGCGT+TGG | - | chr8_1:46449188-46449207 | Msa1196760:intron | 55.0% |
| AGAAGCTGCGTTGGAGTTGG+AGG | - | chr8_1:46449197-46449216 | Msa1196760:intron | 55.0% | |
| GAAGCTGCGTTGGAGTTGGA+GGG | - | chr8_1:46449198-46449217 | Msa1196760:intron | 55.0% | |
| CCGGGGACATTTGACGTGCT+TGG | - | chr8_1:46444325-46444344 | Msa1196760:CDS | 60.0% | |
| !! | GCCCTTTCGAGTTCTGGCGT+AGG | + | chr8_1:46445338-46445357 | None:intergenic | 60.0% |
| GCATCCCCACAGAGGAGACT+TGG | + | chr8_1:46445774-46445793 | None:intergenic | 60.0% | |
| CCACAACTGCATCCCCACAG+AGG | + | chr8_1:46445782-46445801 | None:intergenic | 60.0% | |
| CCTCTGTGGGGATGCAGTTG+TGG | - | chr8_1:46445779-46445798 | Msa1196760:intron | 60.0% | |
| ! | CATCTGGAGCGTGACCTGAG+AGG | + | chr8_1:46446694-46446713 | None:intergenic | 60.0% |
| !! | TGGCTTTGGGATGCTTCCCC+AGG | - | chr8_1:46448218-46448237 | Msa1196760:CDS | 60.0% |
| ! | TGATGGTGTGGACACCGCCT+CGG | - | chr8_1:46449230-46449249 | Msa1196760:intron | 60.0% |
| TGGTGTGGACACCGCCTCGG+TGG | - | chr8_1:46449233-46449252 | Msa1196760:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 46443764 | 46449895 | 46443764 | ID=Msa1196760;Name=Msa1196760 |
| chr8_1 | mRNA | 46443764 | 46449895 | 46443764 | ID=Msa1196760-mRNA-1;Parent=Msa1196760;Name=Msa1196760-mRNA-1;_AED=0.13;_eAED=0.13;_QI=188|1|0.87|1|1|1|8|257|863 |
| chr8_1 | exon | 46443764 | 46445078 | 46443764 | ID=Msa1196760-mRNA-1:exon:14827;Parent=Msa1196760-mRNA-1 |
| chr8_1 | exon | 46445286 | 46445540 | 46445286 | ID=Msa1196760-mRNA-1:exon:14826;Parent=Msa1196760-mRNA-1 |
| chr8_1 | exon | 46445843 | 46445957 | 46445843 | ID=Msa1196760-mRNA-1:exon:14825;Parent=Msa1196760-mRNA-1 |
| chr8_1 | exon | 46446061 | 46446443 | 46446061 | ID=Msa1196760-mRNA-1:exon:14824;Parent=Msa1196760-mRNA-1 |
| chr8_1 | exon | 46447319 | 46447369 | 46447319 | ID=Msa1196760-mRNA-1:exon:14823;Parent=Msa1196760-mRNA-1 |
| chr8_1 | exon | 46448183 | 46448431 | 46448183 | ID=Msa1196760-mRNA-1:exon:14822;Parent=Msa1196760-mRNA-1 |
| chr8_1 | exon | 46448507 | 46448735 | 46448507 | ID=Msa1196760-mRNA-1:exon:14821;Parent=Msa1196760-mRNA-1 |
| chr8_1 | exon | 46449456 | 46449895 | 46449456 | ID=Msa1196760-mRNA-1:exon:14820;Parent=Msa1196760-mRNA-1 |
| chr8_1 | five_prime_UTR | 46449708 | 46449895 | 46449708 | ID=Msa1196760-mRNA-1:five_prime_utr;Parent=Msa1196760-mRNA-1 |
| chr8_1 | CDS | 46449456 | 46449707 | 46449456 | ID=Msa1196760-mRNA-1:cds;Parent=Msa1196760-mRNA-1 |
| chr8_1 | CDS | 46448507 | 46448735 | 46448507 | ID=Msa1196760-mRNA-1:cds;Parent=Msa1196760-mRNA-1 |
| chr8_1 | CDS | 46448183 | 46448431 | 46448183 | ID=Msa1196760-mRNA-1:cds;Parent=Msa1196760-mRNA-1 |
| chr8_1 | CDS | 46447319 | 46447369 | 46447319 | ID=Msa1196760-mRNA-1:cds;Parent=Msa1196760-mRNA-1 |
| chr8_1 | CDS | 46446061 | 46446443 | 46446061 | ID=Msa1196760-mRNA-1:cds;Parent=Msa1196760-mRNA-1 |
| chr8_1 | CDS | 46445843 | 46445957 | 46445843 | ID=Msa1196760-mRNA-1:cds;Parent=Msa1196760-mRNA-1 |
| chr8_1 | CDS | 46445286 | 46445540 | 46445286 | ID=Msa1196760-mRNA-1:cds;Parent=Msa1196760-mRNA-1 |
| chr8_1 | CDS | 46444021 | 46445078 | 46444021 | ID=Msa1196760-mRNA-1:cds;Parent=Msa1196760-mRNA-1 |
| chr8_1 | three_prime_UTR | 46443764 | 46444020 | 46443764 | ID=Msa1196760-mRNA-1:three_prime_utr;Parent=Msa1196760-mRNA-1 |
| Gene Sequence |
| Protein sequence |
