AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1303990

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1303990 MtrunA17_Chr8g0365001 98.929 840 9 0 1 840 1 840 0.0 1712
Msa1303990 MtrunA17_Chr2g0279131 55.699 851 356 6 7 840 3 849 0.0 945
Msa1303990 MtrunA17_Chr5g0429991 56.265 830 348 6 21 840 25 849 0.0 920
Msa1303990 MtrunA17_Chr4g0055471 45.885 802 391 9 61 840 35 815 0.0 732
Msa1303990 MtrunA17_Chr2g0297291 47.893 783 376 10 71 840 26 789 0.0 720
Msa1303990 MtrunA17_Chr6g0461871 47.043 761 387 7 94 840 27 785 0.0 718
Msa1303990 MtrunA17_Chr7g0268981 45.583 781 379 7 59 838 36 771 0.0 714
Msa1303990 MtrunA17_Chr4g0052401 46.675 782 385 10 71 840 26 787 0.0 689
Msa1303990 MtrunA17_Chr5g0430731 44.882 762 396 6 81 840 15 754 0.0 688
Msa1303990 MtrunA17_Chr6g0451081 45.866 774 392 9 84 840 13 776 0.0 684
Msa1303990 MtrunA17_Chr8g0380281 44.558 781 422 4 64 840 9 782 0.0 679
Msa1303990 MtrunA17_Chr3g0128831 45.141 782 394 12 89 840 18 794 0.0 665
Msa1303990 MtrunA17_Chr8g0387661 42.857 777 401 8 94 840 29 792 0.0 599
Msa1303990 MtrunA17_Chr8g0393241 35.139 794 475 10 77 836 8 795 1.90e-171 516
Msa1303990 MtrunA17_Chr8g0344561 42.809 598 304 7 243 840 13 572 4.65e-168 499
Msa1303990 MtrunA17_Chr8g0375411 36.711 760 401 12 80 838 16 696 4.82e-168 503
Msa1303990 MtrunA17_Chr8g0365031 49.049 473 229 3 263 726 40 509 1.91e-158 473
Msa1303990 MtrunA17_Chr2g0297311 53.571 392 176 3 100 489 58 445 1.54e-144 434
Msa1303990 MtrunA17_Chr5g0430571 39.378 579 288 9 263 840 19 535 2.45e-141 429
Msa1303990 MtrunA17_Chr5g0413721 50.115 433 205 5 73 494 1 433 9.80e-139 433
Msa1303990 MtrunA17_Chr5g0413721 36.486 370 204 4 488 840 516 871 6.17e-69 245
Msa1303990 MtrunA17_Chr8g0344591 44.222 450 227 4 243 692 13 438 1.24e-134 409
Msa1303990 MtrunA17_Chr2g0297321 41.274 361 187 5 489 840 3 347 4.29e-85 275
Msa1303990 MtrunA17_Chr8g0365041 45.339 236 111 6 21 252 2 223 2.08e-58 199
Msa1303990 MtrunA17_Chr5g0413751 44.318 176 98 0 489 664 133 308 8.12e-52 183
Msa1303990 MtrunA17_Chr5g0413751 39.716 141 69 4 106 239 7 138 4.14e-19 89.0
Msa1303990 MtrunA17_Chr8g0344581 56.209 153 62 2 91 243 3 150 3.08e-51 176
Msa1303990 MtrunA17_Chr8g0344551 56.209 153 62 2 91 243 3 150 4.58e-51 176
Msa1303990 MtrunA17_Chr5g0430551 48.701 154 76 3 92 243 11 163 9.10e-41 148
Msa1303990 MtrunA17_Chr1g0159401 49.167 120 54 2 241 360 12 124 7.22e-27 107
Msa1303990 MtrunA17_Chr6g0467721 33.951 162 88 4 246 398 8 159 1.37e-13 71.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1303990 AT1G60160.1 73.641 846 196 9 3 840 1 827 0.0 1241
Msa1303990 AT5G09400.1 56.628 860 337 8 8 840 8 858 0.0 935
Msa1303990 AT4G33530.1 55.900 839 355 5 14 840 20 855 0.0 920
Msa1303990 AT4G13420.1 45.244 820 405 11 23 838 4 783 0.0 732
Msa1303990 AT4G33530.2 58.509 617 249 4 228 840 14 627 0.0 729
Msa1303990 AT2G35060.4 47.383 745 370 6 100 840 66 792 0.0 703
Msa1303990 AT2G35060.1 47.383 745 370 6 100 840 66 792 0.0 703
Msa1303990 AT2G35060.3 47.383 745 370 6 100 840 66 792 0.0 703
Msa1303990 AT2G35060.2 47.319 746 370 7 100 840 66 793 0.0 698
Msa1303990 AT1G31120.1 48.318 743 371 6 100 840 65 796 0.0 698
Msa1303990 AT5G14880.1 45.338 783 388 11 84 840 13 781 0.0 675
Msa1303990 AT2G40540.1 44.641 793 398 8 80 840 11 794 0.0 675
Msa1303990 AT2G40540.5 44.641 793 398 8 80 840 11 794 0.0 675
Msa1303990 AT2G40540.4 44.641 793 398 8 80 840 11 794 0.0 675
Msa1303990 AT2G40540.2 44.641 793 398 8 80 840 11 794 0.0 675
Msa1303990 AT2G40540.3 44.641 793 398 8 80 840 11 794 0.0 675
Msa1303990 AT1G70300.1 44.289 788 413 8 73 840 1 782 0.0 661
Msa1303990 AT4G19960.2 47.130 749 389 4 96 840 62 807 0.0 660
Msa1303990 AT2G30070.1 43.644 763 364 7 80 840 14 712 0.0 655
Msa1303990 AT4G19960.1 46.144 765 389 5 96 840 62 823 0.0 649
Msa1303990 AT3G02050.1 44.716 776 402 7 86 840 20 789 0.0 649
Msa1303990 AT4G19960.3 45.548 775 389 5 96 840 62 833 0.0 645
Msa1303990 AT4G23640.1 44.805 770 390 7 94 838 14 773 0.0 637
Msa1303990 AT2G30070.2 41.679 655 318 5 186 840 2 592 0.0 533
Msa1303990 AT4G19960.4 45.361 582 313 2 263 840 6 586 7.48e-173 512

Find 181 sgRNAs with CRISPR-Local

Find 379 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGGAACTTCTATGATTAT+TGG 0.164640 8_3:-67305019 Msa1303990:CDS
TGCATTTGAGCAACTTCTTA+TGG 0.203702 8_3:-67301512 Msa1303990:CDS
CTTGATCTTGGTTCCAATCT+TGG 0.206414 8_3:-67301790 Msa1303990:CDS
TTTACATCCCTGTTATTAAT+TGG 0.208912 8_3:-67302371 Msa1303990:CDS
ATGTCTCCTCCTTGCTTATA+TGG 0.219614 8_3:-67302908 Msa1303990:CDS
AAGCTCTTCTGCTCCATTAC+TGG 0.258461 8_3:+67301372 None:intergenic
CTTAGAGAAGCAATGGATTC+AGG 0.266535 8_3:-67301214 Msa1303990:CDS
CGCTGTACTCGCTGATTTGT+AGG 0.266783 8_3:-67305204 Msa1303990:CDS
TATTATTTCTTCAAGAATAA+TGG 0.267048 8_3:-67303354 Msa1303990:CDS
GGTCTACAGGATCAAATAAA+TGG 0.272312 8_3:-67304452 Msa1303990:CDS
GGCTTGTTAAGAAACCTAAA+AGG 0.285699 8_3:-67306409 Msa1303990:CDS
CAGACTCTTGGTGTTGTATA+TGG 0.289384 8_3:-67305484 Msa1303990:CDS
GTGATGTATACGTGGAACTA+TGG 0.302434 8_3:-67301868 Msa1303990:CDS
TTGTTAGTGTTGGTTCTTCT+TGG 0.308220 8_3:-67305037 Msa1303990:CDS
TTTAAAGCCCTTTCGAGTTC+AGG 0.310511 8_3:+67305103 None:intergenic
GTTCTCAAAGCTAATGATAA+TGG 0.313250 8_3:-67305319 Msa1303990:CDS
ATCAGAAACCAATTAATAAC+AGG 0.314103 8_3:+67302363 None:intergenic
GAAGCAATGTTTGCAGATCT+TGG 0.314553 8_3:-67303085 Msa1303990:CDS
TTGATCCTGTAGACCACTTA+TGG 0.326090 8_3:+67304460 None:intergenic
CGTTAAGCAATCAATGGCTT+TGG 0.328371 8_3:-67302448 Msa1303990:CDS
TGGCTTTGGGATGCTTCCCC+AGG 0.332579 8_3:-67302434 Msa1303990:CDS
AGTGAGTCTAGGTGGGTTGA+TGG 0.339971 8_3:-67306515 Msa1303990:CDS
GAGAAGGGTATGGTTCAATT+AGG 0.342192 8_3:-67306436 Msa1303990:CDS
TAGAAGGAACTGCAGGAAAA+TGG 0.349309 8_3:+67301708 None:intergenic
ACATCGTCATCTGAGTTAAT+AGG 0.355218 8_3:+67305409 None:intergenic
TACTCTTACTGTTCCAAGAT+TGG 0.357857 8_3:+67301777 None:intergenic
ATACATCACGGAGAGGAAAA+AGG 0.362860 8_3:+67301882 None:intergenic
ATTCTAACTCCAGCGATATC+AGG 0.368280 8_3:-67304989 Msa1303990:intron
CAGGATCAAATAAATGGATT+TGG 0.372956 8_3:-67304446 Msa1303990:CDS
GGTTGTGTTCTGTGCATTAC+AGG 0.377456 8_3:-67303306 Msa1303990:intron
GTATTCTTCAAATCTGTTCC+AGG 0.388671 8_3:-67302841 Msa1303990:intron
TTATATAGCAATCCTATTCC+TGG 0.391926 8_3:+67301754 None:intergenic
TTGCAATATCTGTAGTGCTT+TGG 0.394561 8_3:+67302310 None:intergenic
GCATTAGCATTTCAGACTCT+TGG 0.399098 8_3:-67305496 Msa1303990:CDS
TGAAATGCTAATGCAATTGT+AGG 0.400010 8_3:+67305505 None:intergenic
ATGGACTTAATGCTTGATCT+TGG 0.400243 8_3:-67301802 Msa1303990:CDS
AACTCAGATGACGATGTCTT+GGG 0.403908 8_3:-67305403 Msa1303990:CDS
TGTCTCCTCCTTGCTTATAT+GGG 0.404323 8_3:-67302907 Msa1303990:CDS
GAAGAGCTGGAAGGCTTAGA+AGG 0.411739 8_3:+67301692 None:intergenic
GGTCAGAATTTAGAAGAAAC+AGG 0.416226 8_3:-67301331 Msa1303990:CDS
ATTTAGAAGAAGAATGAAGT+TGG 0.417680 8_3:-67306591 Msa1303990:exon
CATCCCCACTTGAATGATAT+TGG 0.418494 8_3:+67301051 None:intergenic
GTTGAATAGAGAGTCTATTC+TGG 0.418549 8_3:-67302542 Msa1303990:intron
AAGAAATAATAGATATATGC+TGG 0.419596 8_3:+67303366 None:intergenic
ATCTCCATGTCCAAGCAAAT+AGG 0.423110 8_3:+67301186 None:intergenic
ATCTGTAGTGCTTTGGAAGA+TGG 0.427886 8_3:+67302317 None:intergenic
TCTTGAGGAACCACAGGAAT+CGG 0.428798 8_3:+67301634 None:intergenic
CTTTCTTCTTGAGGAACCAC+AGG 0.434369 8_3:+67301628 None:intergenic
GATTCACAAACCTGTATTGC+TGG 0.437248 8_3:+67303049 None:intergenic
GTTAAGCAATCAATGGCTTT+GGG 0.437944 8_3:-67302447 Msa1303990:CDS
TCAAGTGGGGATGACATATA+TGG 0.439510 8_3:-67301041 Msa1303990:CDS
TAACTCAGATGACGATGTCT+TGG 0.441627 8_3:-67305404 Msa1303990:CDS
TCATCAGCTTGTTGGCGATT+CGG 0.441990 8_3:+67305160 None:intergenic
TCAGGATTCACCTATTTGCT+TGG 0.448637 8_3:-67301196 Msa1303990:CDS
AGATTTGTTCATCAGCTTGT+TGG 0.449742 8_3:+67305152 None:intergenic
ACAGTAAGAGTACCAGGAAT+AGG 0.451647 8_3:-67301766 Msa1303990:CDS
GAAGGAAGTGTGAGGTTGTT+GGG 0.455074 8_3:-67306557 Msa1303990:CDS
ACAGATATTGCAAATGCATA+TGG 0.455341 8_3:-67302300 Msa1303990:intron
GTCTGCCATAAGTGGTCTAC+AGG 0.455828 8_3:-67304465 Msa1303990:CDS
CGGAACATATGATAATCTTT+CGG 0.459350 8_3:+67301583 None:intergenic
AGCATTCAACAGTTCGGTAC+TGG 0.463934 8_3:-67303501 Msa1303990:CDS
TGAATCAGGACCTTTCCCTT+TGG 0.465027 8_3:-67305528 Msa1303990:intron
GTAATGGAGCAGAAGAGCTT+AGG 0.465808 8_3:-67301369 Msa1303990:CDS
TTGATGGAAGTGAAGTTGAT+TGG 0.468335 8_3:-67306499 Msa1303990:CDS
GGTATGAATTATCTTGAGCC+TGG 0.469794 8_3:+67302416 None:intergenic
GTGGGAGTAGTGAGTCTAGG+TGG 0.470544 8_3:-67306523 Msa1303990:CDS
AAATTCTGACCATGCAATAG+TGG 0.471151 8_3:+67301343 None:intergenic
TTCGTGCGTTAAGCAATCAA+TGG 0.473425 8_3:-67302454 Msa1303990:CDS
ATTTCAGGCATTGCTGAAGT+TGG 0.477174 8_3:-67302078 Msa1303990:intron
CAAATAAATGGATTTGGTAC+AGG 0.484132 8_3:-67304440 Msa1303990:intron
TGCTGAAGTTGGTGTGATGA+TGG 0.484656 8_3:-67302067 Msa1303990:CDS
TTCAGCTCTTAGAGAAGCAA+TGG 0.484711 8_3:-67301221 Msa1303990:CDS
AATCTTTCGGACATACTCTT+CGG 0.485567 8_3:+67301596 None:intergenic
AGAAGGAAGTGTGAGGTTGT+TGG 0.491219 8_3:-67306558 Msa1303990:CDS
TTCACCTATTTGCTTGGACA+TGG 0.492212 8_3:-67301190 Msa1303990:CDS
ATATGTTCCGCTGTGTTGCT+AGG 0.493459 8_3:-67301570 Msa1303990:CDS
CTTGGAACAGTAAGAGTACC+AGG 0.493863 8_3:-67301772 Msa1303990:CDS
TGATGGAAGTGAAGTTGATT+GGG 0.493878 8_3:-67306498 Msa1303990:CDS
TTCCGCTGTGTTGCTAGGTA+CGG 0.495566 8_3:-67301565 Msa1303990:CDS
TTGTTCAGCATTCAACAGTT+CGG 0.497318 8_3:-67303507 Msa1303990:CDS
TCTGATCTTGCAGCCAGTAA+TGG 0.500060 8_3:-67301385 Msa1303990:CDS
AGAAGCTGCGTTGGAGTTGG+AGG 0.504460 8_3:-67301455 Msa1303990:CDS
TGGGAGTAGTGAGTCTAGGT+GGG 0.507217 8_3:-67306522 Msa1303990:CDS
TCCTACTCCTGAACTCGAAA+GGG 0.514353 8_3:-67305110 Msa1303990:CDS
AAGAACCATAAAGCAAGTAC+AGG 0.514695 8_3:+67303456 None:intergenic
GTCTTGAGAAATTCTTGAGA+AGG 0.523407 8_3:-67301486 Msa1303990:CDS
CATGGAAGTGATGGTAGAGA+AGG 0.524379 8_3:-67306452 Msa1303990:CDS
CAGTTCGGTACTGGCAAAGT+GGG 0.525126 8_3:-67303492 Msa1303990:CDS
GTATGAATTATCTTGAGCCT+GGG 0.527026 8_3:+67302417 None:intergenic
GCTTGTTAAGAAACCTAAAA+GGG 0.527629 8_3:-67306408 Msa1303990:CDS
TTGTTGGGAAGTAGCAGTGG+TGG 0.527762 8_3:-67306542 Msa1303990:CDS
AAGTTGGATAAGATTGAAGA+AGG 0.529662 8_3:-67306575 Msa1303990:CDS
GTTAGAAGCTGCGTTGGAGT+TGG 0.530443 8_3:-67301458 Msa1303990:CDS
TGATGTATACGTGGAACTAT+GGG 0.537017 8_3:-67301867 Msa1303990:CDS
TAATGCAATTGTAGGCCAAA+GGG 0.539537 8_3:+67305513 None:intergenic
TCTTGAGAAATTCTTGAGAA+GGG 0.540745 8_3:-67301485 Msa1303990:CDS
GGAAGCGTTAGAAGCTGCGT+TGG 0.543749 8_3:-67301464 Msa1303990:CDS
ACTACAATGGAATGAAGAGC+TGG 0.545833 8_3:+67301679 None:intergenic
GAAAGCTCGTATTCTAGACT+AGG 0.551419 8_3:+67301241 None:intergenic
TGTTGGGAAGTAGCAGTGGT+GGG 0.554534 8_3:-67306541 Msa1303990:CDS
GTGGTGGGAGTAGTGAGTCT+AGG 0.556201 8_3:-67306526 Msa1303990:CDS
ACAGATTGCTTTCACTTGTG+TGG 0.556972 8_3:-67302938 Msa1303990:intron
TTCCTACTCCTGAACTCGAA+AGG 0.561853 8_3:-67305111 Msa1303990:CDS
GTGTTTGTTATAGCTACACT+TGG 0.562933 8_3:-67302516 Msa1303990:CDS
GAAGGCTTAGAAGGAACTGC+AGG 0.569528 8_3:+67301701 None:intergenic
GATCCTCCATGGTCTCATCA+TGG 0.569540 8_3:-67306470 Msa1303990:CDS
GGTACGGTTACAAAGACGTT+CGG 0.573020 8_3:-67301549 Msa1303990:CDS
CAATTGTAGGCCAAAGGGAA+AGG 0.573923 8_3:+67305518 None:intergenic
GAAGCTATGGAGATTGCTGC+TGG 0.576180 8_3:-67306368 Msa1303990:CDS
AAAGCTAATGATAATGGAGA+AGG 0.577182 8_3:-67305313 Msa1303990:intron
AAAAGTGCATGGTCAGCTCT+TGG 0.578795 8_3:-67303330 Msa1303990:CDS
CTAATGCAATTGTAGGCCAA+AGG 0.579299 8_3:+67305512 None:intergenic
TGGTCTCATCATGGAAGTGA+TGG 0.581437 8_3:-67306461 Msa1303990:CDS
AGAAATAATAGATATATGCT+GGG 0.582392 8_3:+67303367 None:intergenic
TAATTATCTGAAAGAATGCA+TGG 0.582518 8_3:+67301004 None:intergenic
GGTATGGTTCAATTAGGAGA+AGG 0.584230 8_3:-67306430 Msa1303990:CDS
AGAATAATGGCAAAAGTGCA+TGG 0.588583 8_3:-67303341 Msa1303990:CDS
GCAGTGATGTCTGCCATAAG+TGG 0.591102 8_3:-67304473 Msa1303990:intron
ACTTCTATGATTATTGGTGA+TGG 0.591335 8_3:-67305013 Msa1303990:CDS
AGTGATGGTAGAGAAGGGTA+TGG 0.592180 8_3:-67306446 Msa1303990:CDS
TAAGAAGTTGCTCAAATGCA+TGG 0.592547 8_3:+67301515 None:intergenic
TGGTGTTGTATATGGTGACA+TGG 0.593357 8_3:-67305476 Msa1303990:CDS
CTAAGAAAGAACTGCAGAGG+AGG 0.593431 8_3:-67301100 Msa1303990:CDS
CACACCAATATCATTCAAGT+GGG 0.594275 8_3:-67301055 Msa1303990:CDS
ATATAAGCAAGGAGGAGACA+TGG 0.594374 8_3:+67302910 None:intergenic
TCCTCTCCGTGATGTATACG+TGG 0.597555 8_3:-67301876 Msa1303990:CDS
GCTTGCGTACCTGATATCGC+TGG 0.599894 8_3:+67304980 None:intergenic
ACTCAGATGACGATGTCTTG+GGG 0.599900 8_3:-67305402 Msa1303990:CDS
CTATATAATGAGCTTGTCCA+AGG 0.600793 8_3:-67301739 Msa1303990:CDS
AGGTTGTTGGGAAGTAGCAG+TGG 0.604155 8_3:-67306545 Msa1303990:CDS
ACAGTTCGGTACTGGCAAAG+TGG 0.607010 8_3:-67303493 Msa1303990:CDS
TGATGGTGTGGACACCGCCT+CGG 0.607502 8_3:-67301422 Msa1303990:CDS
GGAACTTCTACCTCACATGA+AGG 0.607974 8_3:-67301310 Msa1303990:CDS
GGAAAATGGAGGGAACACCT+TGG 0.608538 8_3:+67301722 None:intergenic
GAAGCTGCGTTGGAGTTGGA+GGG 0.610650 8_3:-67301454 Msa1303990:CDS
GGAGTGTCTTGAAGTACCGA+AGG 0.610764 8_3:-67301846 Msa1303990:CDS
TGGTCATGATCAACACTCCA+AGG 0.610783 8_3:-67306348 Msa1303990:intron
CTTAGGATTCCACTATTGCA+TGG 0.610989 8_3:-67301352 Msa1303990:CDS
TCACACCAATATCATTCAAG+TGG 0.616744 8_3:-67301056 Msa1303990:CDS
CTCAGATGACGATGTCTTGG+GGG 0.619347 8_3:-67305401 Msa1303990:CDS
ATGGAAGTGATGGTAGAGAA+GGG 0.619739 8_3:-67306451 Msa1303990:CDS
GCCCTTTCGAGTTCAGGAGT+AGG 0.622403 8_3:+67305109 None:intergenic
TAAATATGTTCCGATTCCTG+TGG 0.623832 8_3:-67301644 Msa1303990:CDS
AGGAACTGCAGGAAAATGGA+GGG 0.625809 8_3:+67301712 None:intergenic
CAATGGAATGAAGAGCTGGA+AGG 0.626473 8_3:+67301683 None:intergenic
ATTGGGATGAAGATCCTCCA+TGG 0.626569 8_3:-67306481 Msa1303990:CDS
TTGGAGGGTAACTTAACTGA+TGG 0.627012 8_3:-67301439 Msa1303990:CDS
AAGGAACTGCAGGAAAATGG+AGG 0.628157 8_3:+67301711 None:intergenic
AGAACCATAAAGCAAGTACA+GGG 0.629862 8_3:+67303457 None:intergenic
CAGCTTGGCCCATATAAGCA+AGG 0.633487 8_3:+67302899 None:intergenic
TATGAATTATCTTGAGCCTG+GGG 0.640497 8_3:+67302418 None:intergenic
AGTGTAGCTATAACAAACAC+TGG 0.643046 8_3:+67302519 None:intergenic
GGGTAACTTAACTGATGGTG+TGG 0.643249 8_3:-67301434 Msa1303990:CDS
CGGTTACAAAGACGTTCGGA+AGG 0.649414 8_3:-67301545 Msa1303990:CDS
AAATAAAGGAGACTTTGGAA+AGG 0.655391 8_3:-67305081 Msa1303990:CDS
TTTCTAAGAAAGAACTGCAG+AGG 0.657224 8_3:-67301103 Msa1303990:CDS
TCACTTCCATGATGAGACCA+TGG 0.659119 8_3:+67306464 None:intergenic
TGTTGACGCACCTTCATGTG+AGG 0.659249 8_3:+67301300 None:intergenic
TCCGACGACATATAACTCGA+TGG 0.660897 8_3:+67301271 None:intergenic
AATACACTTGAATAAGACGC+AGG 0.662229 8_3:+67302859 None:intergenic
AGTGCATGGTCAGCTCTTGG+TGG 0.663014 8_3:-67303327 Msa1303990:CDS
ACCATCGAGTTATATGTCGT+CGG 0.666017 8_3:-67301272 Msa1303990:CDS
AAGCATTACTAGTGTCACCA+AGG 0.672487 8_3:+67302035 None:intergenic
TCAGAAACCAATTAATAACA+GGG 0.686251 8_3:+67302364 None:intergenic
GGTGTTGTATATGGTGACAT+GGG 0.689848 8_3:-67305475 Msa1303990:CDS
GAGTGTCTTGAAGTACCGAA+GGG 0.690651 8_3:-67301845 Msa1303990:CDS
ATTTCTTGTATCCACCGAGG+CGG 0.700960 8_3:+67301408 None:intergenic
TGGTGTGGACACCGCCTCGG+TGG 0.702237 8_3:-67301419 Msa1303990:CDS
ATAGTTCCACGTATACATCA+CGG 0.707884 8_3:+67301870 None:intergenic
CATTACTAGTGTCACCAAGG+TGG 0.712618 8_3:+67302038 None:intergenic
GATGATGGTTAGCACCACCT+TGG 0.715380 8_3:-67302052 Msa1303990:CDS
CTTGGCCCATATAAGCAAGG+AGG 0.723455 8_3:+67302902 None:intergenic
TCCACGTATACATCACGGAG+AGG 0.724985 8_3:+67301875 None:intergenic
AGATTGAAGAAGGAAGTGTG+AGG 0.728871 8_3:-67306565 Msa1303990:CDS
ACACCAATATCATTCAAGTG+GGG 0.735184 8_3:-67301054 Msa1303990:CDS
GAACCATAAAGCAAGTACAG+GGG 0.743969 8_3:+67303458 None:intergenic
AGAATTTCTTGTATCCACCG+AGG 0.747791 8_3:+67301405 None:intergenic
CTTCCATGATGAGACCATGG+AGG 0.760877 8_3:+67306467 None:intergenic
ACTTGAATGATATTGGTGTG+AGG 0.767010 8_3:+67301058 None:intergenic
GAATGCTGAACAAAGCCACG+AGG 0.770685 8_3:+67303517 None:intergenic
AACCGTACCTAGCAACACAG+CGG 0.771805 8_3:+67301563 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CAAATTTTAAGATAATATAT+GGG - chr8_3:67303413-67303432 Msa1303990:CDS 10.0%
!! TAAATAAAAACTATAATAAG+AGG - chr8_3:67304932-67304951 Msa1303990:intron 10.0%
!!! TGGTTTTATATAATTTATTG+AGG - chr8_3:67301223-67301242 Msa1303990:CDS 15.0%
!! AAGTCAGTTATAAATAAAAA+TGG - chr8_3:67301840-67301859 Msa1303990:CDS 15.0%
!! AGTCAGTTATAAATAAAAAT+GGG - chr8_3:67301841-67301860 Msa1303990:CDS 15.0%
!!! ATAAAAACATATTTTGCTAA+TGG + chr8_3:67302206-67302225 None:intergenic 15.0%
!! ATTTATAATATAAGCAAAGA+TGG - chr8_3:67303187-67303206 Msa1303990:intron 15.0%
!! CCATATATTATCTTAAAATT+TGG + chr8_3:67303415-67303434 None:intergenic 15.0%
!!! CCAAATTTTAAGATAATATA+TGG - chr8_3:67303412-67303431 Msa1303990:CDS 15.0%
!!! TATTATTTCTTCAAGAATAA+TGG - chr8_3:67304192-67304211 Msa1303990:intron 15.0%
!!! GTTATGTATATTAATCATTT+TGG - chr8_3:67304960-67304979 Msa1303990:intron 15.0%
!!! ATTCCTTTTTTTTTTCTTTA+TGG - chr8_3:67305301-67305320 Msa1303990:intron 15.0%
!! AATTATATAAAACCATACCT+TGG + chr8_3:67301218-67301237 None:intergenic 20.0%
!!! ATCATAGATTATTCATGTTT+TGG - chr8_3:67301285-67301304 Msa1303990:CDS 20.0%
!! TTATGAAAATAAGCTGAAAA+AGG + chr8_3:67301488-67301507 None:intergenic 20.0%
!! GTTATAAATAAAAATGGGAA+TGG - chr8_3:67301846-67301865 Msa1303990:CDS 20.0%
!!! GTTGAAAGATTTTTGTATAA+TGG - chr8_3:67301889-67301908 Msa1303990:CDS 20.0%
!! TTTAAAAATAAAGGAGACTT+TGG - chr8_3:67302460-67302479 Msa1303990:CDS 20.0%
!!! GCAATTCTGTTTAAAATTTT+TGG - chr8_3:67302606-67302625 Msa1303990:intron 20.0%
!! AAATCAAAAAGTTCAAAAAG+TGG + chr8_3:67302963-67302982 None:intergenic 20.0%
!!! TTTTTGCTTCTATGTTAATA+TGG - chr8_3:67303832-67303851 Msa1303990:intron 20.0%
!!! CTATCAACTATTTTGTAATT+CGG - chr8_3:67303874-67303893 Msa1303990:intron 20.0%
!! TTTAGTTATGTTACAAACTA+TGG - chr8_3:67303915-67303934 Msa1303990:intron 20.0%
!! TTGTTGTGTAAAAAACAATT+TGG + chr8_3:67303947-67303966 None:intergenic 20.0%
!! AGAAATAATAGATATATGCT+GGG + chr8_3:67304182-67304201 None:intergenic 20.0%
!! AAGAAATAATAGATATATGC+TGG + chr8_3:67304183-67304202 None:intergenic 20.0%
!! TAATTGACATGTATAATACA+TGG - chr8_3:67304307-67304326 Msa1303990:intron 20.0%
!! GCATTATAAATAACACATTT+CGG + chr8_3:67304370-67304389 None:intergenic 20.0%
!!! AAAACTATAATAAGAGGTAT+TGG - chr8_3:67304938-67304957 Msa1303990:intron 20.0%
!! GAACCATAAAGAAAAAAAAA+AGG + chr8_3:67305307-67305326 None:intergenic 20.0%
!!! TTTTTTTCTTTATGGTTCTA+AGG - chr8_3:67305309-67305328 Msa1303990:intron 20.0%
!! ACAAATTTCGACAATAATTT+AGG + chr8_3:67305385-67305404 None:intergenic 20.0%
!! AATAAAAATCTTTCTTCTTG+AGG + chr8_3:67305930-67305949 None:intergenic 20.0%
!!! CTCTTTTTTCTTTAAGAAAT+TGG - chr8_3:67306400-67306419 Msa1303990:CDS 20.0%
!!! TTTTTAGAATGTTTCAATCG+TGG - chr8_3:67300781-67300800 Msa1303990:three_prime_UTR 25.0%
!!! CATTTTTTCACAGAAACAAA+GGG - chr8_3:67300844-67300863 Msa1303990:three_prime_UTR 25.0%
!!! ACTTTATCAACAAGTTTTGA+TGG + chr8_3:67300890-67300909 None:intergenic 25.0%
! ATTTAGAAGAAGAATGAAGT+TGG - chr8_3:67300955-67300974 Msa1303990:three_prime_UTR 25.0%
! ATAAATAAAAATGGGAATGG+AGG - chr8_3:67301849-67301868 Msa1303990:CDS 25.0%
!! TTTTGTATAATGGCGAATTT+AGG - chr8_3:67301899-67301918 Msa1303990:CDS 25.0%
! TAATATAAAAACTGAAGCCT+CGG + chr8_3:67301936-67301955 None:intergenic 25.0%
! ACAAAAGATATTAAAGACAG+AGG + chr8_3:67301991-67302010 None:intergenic 25.0%
! TTTATACTACATTATAGTGC+TGG + chr8_3:67302753-67302772 None:intergenic 25.0%
!! TGCTTTTATAAAGGAAAGAA+AGG - chr8_3:67303218-67303237 Msa1303990:intron 25.0%
! CTAACTCAACAATAGAAAAT+CGG + chr8_3:67303385-67303404 None:intergenic 25.0%
!!! TGACTTATAAACACTTTTTC+CGG + chr8_3:67303553-67303572 None:intergenic 25.0%
!!! AAAAAGTGTTTATAAGTCAG+AGG - chr8_3:67303554-67303573 Msa1303990:intron 25.0%
!!! GTTTTTTACACAACAAAGTT+TGG - chr8_3:67303951-67303970 Msa1303990:intron 25.0%
! TTTCATGAAGAAAGAATTTG+AGG + chr8_3:67304522-67304541 None:intergenic 25.0%
!!! TGTTTTGAATCATATAACCA+CGG - chr8_3:67304736-67304755 Msa1303990:intron 25.0%
! TTTACATCCCTGTTATTAAT+TGG - chr8_3:67305175-67305194 Msa1303990:CDS 25.0%
! TCAGAAACCAATTAATAACA+GGG + chr8_3:67305185-67305204 None:intergenic 25.0%
! ATCAGAAACCAATTAATAAC+AGG + chr8_3:67305186-67305205 None:intergenic 25.0%
! CATTTCATTTGTTCTATTTC+AGG - chr8_3:67305453-67305472 Msa1303990:CDS 25.0%
!!! CACTAGTAATGCTTTTAATT+TGG - chr8_3:67305520-67305539 Msa1303990:CDS 25.0%
!!! TTTTGTTTCCTACTTGTTTT+TGG - chr8_3:67305564-67305583 Msa1303990:intron 25.0%
! AGTAAGAGAAAAAGTTTCAA+TGG - chr8_3:67305725-67305744 Msa1303990:intron 25.0%
! TAATTATCTGAAAGAATGCA+TGG + chr8_3:67306545-67306564 None:intergenic 25.0%
TCTGTGAAAAAATGGAACAT+TGG + chr8_3:67300838-67300857 None:intergenic 30.0%
!! CCTTTGTTTCTGTGAAAAAA+TGG + chr8_3:67300846-67300865 None:intergenic 30.0%
!!! CCATTTTTTCACAGAAACAA+AGG - chr8_3:67300843-67300862 Msa1303990:three_prime_UTR 30.0%
!! CTGAATCATTTTTCACAAGT+GGG - chr8_3:67300926-67300945 Msa1303990:three_prime_UTR 30.0%
AAGTTGGATAAGATTGAAGA+AGG - chr8_3:67300971-67300990 Msa1303990:three_prime_UTR 30.0%
! GCTTGTTAAGAAACCTAAAA+GGG - chr8_3:67301138-67301157 Msa1303990:CDS 30.0%
TCATATAAGTGTAACTCAGA+TGG - chr8_3:67301309-67301328 Msa1303990:CDS 30.0%
TTTGAGAGAACTTATGAACA+CGG - chr8_3:67301442-67301461 Msa1303990:CDS 30.0%
TATAAGCTGTTTATCCAAAC+AGG - chr8_3:67301621-67301640 Msa1303990:CDS 30.0%
! TAGAATGTTCATGTTTTGTG+TGG - chr8_3:67301693-67301712 Msa1303990:CDS 30.0%
TGAAATGCTAATGCAATTGT+AGG + chr8_3:67302044-67302063 None:intergenic 30.0%
GTTCTCAAAGCTAATGATAA+TGG - chr8_3:67302227-67302246 Msa1303990:intron 30.0%
!! AAAGCTAATGATAATGGAGA+AGG - chr8_3:67302233-67302252 Msa1303990:intron 30.0%
! TATGTTGATTGCTTAACTGT+AGG - chr8_3:67302308-67302327 Msa1303990:CDS 30.0%
!! CGAAAGGGCTTTAAAAATAA+AGG - chr8_3:67302451-67302470 Msa1303990:CDS 30.0%
! AAATAAAGGAGACTTTGGAA+AGG - chr8_3:67302465-67302484 Msa1303990:CDS 30.0%
CTTGGAACTTCTATGATTAT+TGG - chr8_3:67302527-67302546 Msa1303990:CDS 30.0%
ACTTCTATGATTATTGGTGA+TGG - chr8_3:67302533-67302552 Msa1303990:CDS 30.0%
! ATTTGTCATCTGAAATGGAT+AGG + chr8_3:67302940-67302959 None:intergenic 30.0%
ATGTACCTTAAGTATAACCA+TGG - chr8_3:67303038-67303057 Msa1303990:intron 30.0%
! CAGGATCAAATAAATGGATT+TGG - chr8_3:67303100-67303119 Msa1303990:intron 30.0%
! CAAATAAATGGATTTGGTAC+AGG - chr8_3:67303106-67303125 Msa1303990:intron 30.0%
TTCATTTCTCCATTGAGATT+TGG + chr8_3:67303266-67303285 None:intergenic 30.0%
CACTTATAAAACGTACTTTC+AGG + chr8_3:67303339-67303358 None:intergenic 30.0%
!! CTGAAAGTACGTTTTATAAG+TGG - chr8_3:67303337-67303356 Msa1303990:CDS 30.0%
! CGATTTTCTATTGTTGAGTT+AGG - chr8_3:67303383-67303402 Msa1303990:CDS 30.0%
TGACCAAACAGATCTTATAT+AGG + chr8_3:67303439-67303458 None:intergenic 30.0%
CTAAATTGACTATATCCTTG+AGG - chr8_3:67303664-67303683 Msa1303990:intron 30.0%
!!! AATTCGGTGTTTGCTATTTT+TGG - chr8_3:67303890-67303909 Msa1303990:intron 30.0%
!!! TATATCTATTTTAGTCCTCG+TGG - chr8_3:67304014-67304033 Msa1303990:intron 30.0%
! AACCTCTTTTCTCATTTTCA+TGG - chr8_3:67304265-67304284 Msa1303990:intron 30.0%
CATGTCAATTACAATGCTTA+CGG + chr8_3:67304298-67304317 None:intergenic 30.0%
ATGCATAGAAACAACTCTTT+AGG - chr8_3:67304386-67304405 Msa1303990:intron 30.0%
AAAGCAATCTGTATAAGCAA+TGG + chr8_3:67304600-67304619 None:intergenic 30.0%
ATTCAAAACACTATATCACC+TGG + chr8_3:67304726-67304745 None:intergenic 30.0%
AAACATATTATACTGACCGT+TGG + chr8_3:67304774-67304793 None:intergenic 30.0%
TCATACCTCAAAAAAGTTCA+TGG - chr8_3:67305146-67305165 Msa1303990:CDS 30.0%
CATACCTCAAAAAAGTTCAT+GGG - chr8_3:67305147-67305166 Msa1303990:CDS 30.0%
ACAGATATTGCAAATGCATA+TGG - chr8_3:67305246-67305265 Msa1303990:intron 30.0%
! TTTCTCCATCACTATTTTCA+TGG - chr8_3:67305275-67305294 Msa1303990:intron 30.0%
ATACTCCATGAAAATAGTGA+TGG + chr8_3:67305283-67305302 None:intergenic 30.0%
AGGTGAAATCATGATATAGT+CGG + chr8_3:67305365-67305384 None:intergenic 30.0%
TTATATAGCAATCCTATTCC+TGG + chr8_3:67305795-67305814 None:intergenic 30.0%
AATGCAGACAAAAACTACAA+TGG + chr8_3:67305883-67305902 None:intergenic 30.0%
CGGAACATATGATAATCTTT+CGG + chr8_3:67305966-67305985 None:intergenic 30.0%
TCTTGAGAAATTCTTGAGAA+GGG - chr8_3:67306061-67306080 Msa1303990:intron 30.0%
!! GCTGAATCATTTTTCACAAG+TGG - chr8_3:67300925-67300944 Msa1303990:three_prime_UTR 35.0%
! TTGATGGAAGTGAAGTTGAT+TGG - chr8_3:67301047-67301066 Msa1303990:CDS 35.0%
! TGATGGAAGTGAAGTTGATT+GGG - chr8_3:67301048-67301067 Msa1303990:CDS 35.0%
!! GGCTTGTTAAGAAACCTAAA+AGG - chr8_3:67301137-67301156 Msa1303990:CDS 35.0%
! TCAAAAGAGTCAACCCTTTT+AGG + chr8_3:67301154-67301173 None:intergenic 35.0%
! CTCTTTTGATGTTGAAGCTA+TGG - chr8_3:67301165-67301184 Msa1303990:CDS 35.0%
ACTCAGATGGTATTAAACTG+TGG - chr8_3:67301322-67301341 Msa1303990:CDS 35.0%
CTCAGATGGTATTAAACTGT+GGG - chr8_3:67301323-67301342 Msa1303990:CDS 35.0%
TCAGATGGTATTAAACTGTG+GGG - chr8_3:67301324-67301343 Msa1303990:CDS 35.0%
TGTGTGTGAATTTCGCTATT+AGG - chr8_3:67301651-67301670 Msa1303990:CDS 35.0%
GCATAATGTGTTGCAATCAT+TGG - chr8_3:67301715-67301734 Msa1303990:CDS 35.0%
ACTTCTTTCTTCGATCCTTA+CGG + chr8_3:67301744-67301763 None:intergenic 35.0%
CATTCTGCTATGTGAAATAG+CGG - chr8_3:67301773-67301792 Msa1303990:CDS 35.0%
ATAACGTTGCAGGAAAATAG+TGG - chr8_3:67301796-67301815 Msa1303990:CDS 35.0%
GACTTATTTCAATCGCTGTA+CGG + chr8_3:67301825-67301844 None:intergenic 35.0%
TAATGCAATTGTAGGCCAAA+GGG + chr8_3:67302036-67302055 None:intergenic 35.0%
!! AGTCCTCTTTATGTTTTTGC+TGG - chr8_3:67302098-67302117 Msa1303990:intron 35.0%
ACACCAGCAAAAACATAAAG+AGG + chr8_3:67302104-67302123 None:intergenic 35.0%
ACATCGTCATCTGAGTTAAT+AGG + chr8_3:67302140-67302159 None:intergenic 35.0%
! AGATTTGTTCATCAGCTTGT+TGG + chr8_3:67302397-67302416 None:intergenic 35.0%
! GAAAAACGTGTTGTTAGTGT+TGG - chr8_3:67302499-67302518 Msa1303990:CDS 35.0%
!! TTGTTAGTGTTGGTTCTTCT+TGG - chr8_3:67302509-67302528 Msa1303990:CDS 35.0%
AGCTTAGAGACATATGCTTA+TGG + chr8_3:67302649-67302668 None:intergenic 35.0%
!! ATACCAATTTTAGCACTCAC+AGG - chr8_3:67302678-67302697 Msa1303990:intron 35.0%
GAGTTGTCAAATAGAAGCTA+TGG - chr8_3:67302773-67302792 Msa1303990:intron 35.0%
TTGTCAAATAGAAGCTATGG+TGG - chr8_3:67302776-67302795 Msa1303990:intron 35.0%
! AGTGGATTTGTCATCTGAAA+TGG + chr8_3:67302945-67302964 None:intergenic 35.0%
GGTCTACAGGATCAAATAAA+TGG - chr8_3:67303094-67303113 Msa1303990:intron 35.0%
!! GTGTCTGCTTGCTTTTATAA+AGG - chr8_3:67303209-67303228 Msa1303990:intron 35.0%
! TCAAAGTGTCCAAATCTCAA+TGG - chr8_3:67303254-67303273 Msa1303990:intron 35.0%
GGACACTCAACATTATCAAA+AGG + chr8_3:67303296-67303315 None:intergenic 35.0%
!! AAAATCGGCTTTTAAGCTGA+GGG + chr8_3:67303370-67303389 None:intergenic 35.0%
! AAAACCGGCTTAATCAGTAA+GGG + chr8_3:67303583-67303602 None:intergenic 35.0%
! TAAAACCGGCTTAATCAGTA+AGG + chr8_3:67303584-67303603 None:intergenic 35.0%
!! ACTGATTAAGCCGGTTTTAT+AGG - chr8_3:67303585-67303604 Msa1303990:intron 35.0%
!! CTGATTAAGCCGGTTTTATA+GGG - chr8_3:67303586-67303605 Msa1303990:intron 35.0%
CTAACTCAACCCTATAAAAC+CGG + chr8_3:67303598-67303617 None:intergenic 35.0%
! CTTACTAGCTTAATGTGCTT+TGG - chr8_3:67303719-67303738 Msa1303990:intron 35.0%
TTGTTCAGCATTCAACAGTT+CGG - chr8_3:67304039-67304058 Msa1303990:intron 35.0%
AGAACCATAAAGCAAGTACA+GGG + chr8_3:67304092-67304111 None:intergenic 35.0%
AAGAACCATAAAGCAAGTAC+AGG + chr8_3:67304093-67304112 None:intergenic 35.0%
! TGCTTTATGGTTCTTTTCTC+TGG - chr8_3:67304098-67304117 Msa1303990:intron 35.0%
! GCTTTATGGTTCTTTTCTCT+GGG - chr8_3:67304099-67304118 Msa1303990:intron 35.0%
! TTCTTTTCTCTGGGTTCTAT+TGG - chr8_3:67304108-67304127 Msa1303990:intron 35.0%
! AGAATAATGGCAAAAGTGCA+TGG - chr8_3:67304205-67304224 Msa1303990:intron 35.0%
AGCCATGAAAATGAGAAAAG+AGG + chr8_3:67304270-67304289 None:intergenic 35.0%
!! AGAAACAACTCTTTAGGACA+TGG - chr8_3:67304392-67304411 Msa1303990:intron 35.0%
! TTTTACTGTACCAGCAATAC+AGG - chr8_3:67304487-67304506 Msa1303990:intron 35.0%
! TTTTCATCAGAAAAGCAGCT+TGG + chr8_3:67304665-67304684 None:intergenic 35.0%
AATACACTTGAATAAGACGC+AGG + chr8_3:67304690-67304709 None:intergenic 35.0%
GTATTCTTCAAATCTGTTCC+AGG - chr8_3:67304705-67304724 Msa1303990:intron 35.0%
! TGAACGTTTTTACTGATCTG+AGG - chr8_3:67304856-67304875 Msa1303990:intron 35.0%
!! AAAAATCTTCGTACTGACTG+TGG - chr8_3:67304901-67304920 Msa1303990:intron 35.0%
GTTGAATAGAGAGTCTATTC+TGG - chr8_3:67305004-67305023 Msa1303990:CDS 35.0%
AGTGTAGCTATAACAAACAC+TGG + chr8_3:67305030-67305049 None:intergenic 35.0%
!! GTGTTTGTTATAGCTACACT+TGG - chr8_3:67305030-67305049 Msa1303990:CDS 35.0%
GTTAAGCAATCAATGGCTTT+GGG - chr8_3:67305099-67305118 Msa1303990:CDS 35.0%
TATGAATTATCTTGAGCCTG+GGG + chr8_3:67305131-67305150 None:intergenic 35.0%
GTATGAATTATCTTGAGCCT+GGG + chr8_3:67305132-67305151 None:intergenic 35.0%
!!! TTGACCCATGAACTTTTTTG+AGG + chr8_3:67305154-67305173 None:intergenic 35.0%
TTGCAATATCTGTAGTGCTT+TGG + chr8_3:67305239-67305258 None:intergenic 35.0%
! AGTCCTATCGAAAATTTTCG+AGG - chr8_3:67305614-67305633 Msa1303990:intron 35.0%
! GTCCTATCGAAAATTTTCGA+GGG - chr8_3:67305615-67305634 Msa1303990:intron 35.0%
ATAGTTCCACGTATACATCA+CGG + chr8_3:67305679-67305698 None:intergenic 35.0%
TGATGTATACGTGGAACTAT+GGG - chr8_3:67305679-67305698 Msa1303990:intron 35.0%
! CTTTTTCTCTTACTTCCCTT+CGG + chr8_3:67305719-67305738 None:intergenic 35.0%
ATGGACTTAATGCTTGATCT+TGG - chr8_3:67305744-67305763 Msa1303990:intron 35.0%
CTATATAATGAGCTTGTCCA+AGG - chr8_3:67305807-67305826 Msa1303990:intron 35.0%
TAAATATGTTCCGATTCCTG+TGG - chr8_3:67305902-67305921 Msa1303990:intron 35.0%
AATCTTTCGGACATACTCTT+CGG + chr8_3:67305953-67305972 None:intergenic 35.0%
TAAGAAGTTGCTCAAATGCA+TGG + chr8_3:67306034-67306053 None:intergenic 35.0%
TGCATTTGAGCAACTTCTTA+TGG - chr8_3:67306034-67306053 Msa1303990:intron 35.0%
GTCTTGAGAAATTCTTGAGA+AGG - chr8_3:67306060-67306079 Msa1303990:intron 35.0%
AAATTCTGACCATGCAATAG+TGG + chr8_3:67306206-67306225 None:intergenic 35.0%
GGTCAGAATTTAGAAGAAAC+AGG - chr8_3:67306215-67306234 Msa1303990:intron 35.0%
! TTTCTAAGAAAGAACTGCAG+AGG - chr8_3:67306443-67306462 Msa1303990:CDS 35.0%
ACTTGAATGATATTGGTGTG+AGG + chr8_3:67306491-67306510 None:intergenic 35.0%
TCACACCAATATCATTCAAG+TGG - chr8_3:67306490-67306509 Msa1303990:CDS 35.0%
CACACCAATATCATTCAAGT+GGG - chr8_3:67306491-67306510 Msa1303990:CDS 35.0%
ACACCAATATCATTCAAGTG+GGG - chr8_3:67306492-67306511 Msa1303990:CDS 35.0%
! TTTTTACCAATCATCGCTGA+CGG + chr8_3:67306627-67306646 None:intergenic 35.0%
! AGATTGAAGAAGGAAGTGTG+AGG - chr8_3:67300981-67301000 Msa1303990:three_prime_UTR 40.0%
ATGGAAGTGATGGTAGAGAA+GGG - chr8_3:67301095-67301114 Msa1303990:CDS 40.0%
! GAGAAGGGTATGGTTCAATT+AGG - chr8_3:67301110-67301129 Msa1303990:CDS 40.0%
GGTATGGTTCAATTAGGAGA+AGG - chr8_3:67301116-67301135 Msa1303990:CDS 40.0%
ATGATCAACACTCCAAGGTA+TGG - chr8_3:67301203-67301222 Msa1303990:CDS 40.0%
AAACCATCTTCTCCGCATTT+AGG - chr8_3:67301375-67301394 Msa1303990:CDS 40.0%
AACCATCTTCTCCGCATTTA+GGG - chr8_3:67301376-67301395 Msa1303990:CDS 40.0%
ATCCAAACATGCCCTAAATG+CGG + chr8_3:67301390-67301409 None:intergenic 40.0%
! CATTTAGGGCATGTTTGGAT+TGG - chr8_3:67301390-67301409 Msa1303990:CDS 40.0%
GCGAAATTCACACACACTAA+GGG + chr8_3:67301647-67301666 None:intergenic 40.0%
AGCGAAATTCACACACACTA+AGG + chr8_3:67301648-67301667 None:intergenic 40.0%
TGCAATCATTGGTATCCGTA+AGG - chr8_3:67301726-67301745 Msa1303990:CDS 40.0%
GTAAGGATCGAAGAAAGAAG+TGG - chr8_3:67301743-67301762 Msa1303990:CDS 40.0%
TTTAGGAGTAATACTCACCG+AGG - chr8_3:67301916-67301935 Msa1303990:CDS 40.0%
! CTTTTGTGCTTACGTGAATC+AGG - chr8_3:67302004-67302023 Msa1303990:CDS 40.0%
CTAATGCAATTGTAGGCCAA+AGG + chr8_3:67302037-67302056 None:intergenic 40.0%
GCATTAGCATTTCAGACTCT+TGG - chr8_3:67302050-67302069 Msa1303990:CDS 40.0%
!! CAGACTCTTGGTGTTGTATA+TGG - chr8_3:67302062-67302081 Msa1303990:CDS 40.0%
!! TGGTGTTGTATATGGTGACA+TGG - chr8_3:67302070-67302089 Msa1303990:CDS 40.0%
! GGTGTTGTATATGGTGACAT+GGG - chr8_3:67302071-67302090 Msa1303990:CDS 40.0%
TAACTCAGATGACGATGTCT+TGG - chr8_3:67302142-67302161 Msa1303990:intron 40.0%
AACTCAGATGACGATGTCTT+GGG - chr8_3:67302143-67302162 Msa1303990:intron 40.0%
GTTGATTGCTTAACTGTAGG+AGG - chr8_3:67302311-67302330 Msa1303990:CDS 40.0%
!! TTTAAAGCCCTTTCGAGTTC+AGG + chr8_3:67302446-67302465 None:intergenic 40.0%
ATTCTAACTCCAGCGATATC+AGG - chr8_3:67302557-67302576 Msa1303990:intron 40.0%
TAGTTTCGTCCTCATTTAGG+TGG + chr8_3:67302827-67302846 None:intergenic 40.0%
!! GGTTAGTTTCGTCCTCATTT+AGG + chr8_3:67302830-67302849 None:intergenic 40.0%
TGAACTACACTCTGTTGAAC+TGG - chr8_3:67302893-67302912 Msa1303990:CDS 40.0%
! CTCTGTTGAACTGGTTCAAT+TGG - chr8_3:67302902-67302921 Msa1303990:CDS 40.0%
AAGCGCCATGGTTATACTTA+AGG + chr8_3:67303046-67303065 None:intergenic 40.0%
TTGATCCTGTAGACCACTTA+TGG + chr8_3:67303089-67303108 None:intergenic 40.0%
TCCGACACTAGTATGAGATA+TGG - chr8_3:67303313-67303332 Msa1303990:CDS 40.0%
GCCATATCTCATACTAGTGT+CGG + chr8_3:67303317-67303336 None:intergenic 40.0%
!! GAAAATCGGCTTTTAAGCTG+AGG + chr8_3:67303371-67303390 None:intergenic 40.0%
GGGCCTATATAAGATCTGTT+TGG - chr8_3:67303433-67303452 Msa1303990:CDS 40.0%
GTCCCACATGAAATGAGATA+TGG - chr8_3:67303527-67303546 Msa1303990:CDS 40.0%
GGCCATATCTCATTTCATGT+GGG + chr8_3:67303532-67303551 None:intergenic 40.0%
CACATGAAATGAGATATGGC+CGG - chr8_3:67303531-67303550 Msa1303990:CDS 40.0%
!! CGGTTTTATAGGGTTGAGTT+AGG - chr8_3:67303596-67303615 Msa1303990:intron 40.0%
! TTAATGTGCTTTGGCTCAGT+AGG - chr8_3:67303728-67303747 Msa1303990:intron 40.0%
! GTTTTTACTTGCAGCTGAAG+TGG - chr8_3:67303987-67304006 Msa1303990:intron 40.0%
GAACCATAAAGCAAGTACAG+GGG + chr8_3:67304091-67304110 None:intergenic 40.0%
TTTCTTATGCATTCGAGTGC+AGG - chr8_3:67304434-67304453 Msa1303990:intron 40.0%
GAAGCAATGTTTGCAGATCT+TGG - chr8_3:67304461-67304480 Msa1303990:CDS 40.0%
GATTCACAAACCTGTATTGC+TGG + chr8_3:67304500-67304519 None:intergenic 40.0%
ACAGATTGCTTTCACTTGTG+TGG - chr8_3:67304608-67304627 Msa1303990:intron 40.0%
ATATAAGCAAGGAGGAGACA+TGG + chr8_3:67304639-67304658 None:intergenic 40.0%
ATGTCTCCTCCTTGCTTATA+TGG - chr8_3:67304638-67304657 Msa1303990:intron 40.0%
TGTCTCCTCCTTGCTTATAT+GGG - chr8_3:67304639-67304658 Msa1303990:intron 40.0%
TTCGTGCGTTAAGCAATCAA+TGG - chr8_3:67305092-67305111 Msa1303990:CDS 40.0%
CGTTAAGCAATCAATGGCTT+TGG - chr8_3:67305098-67305117 Msa1303990:CDS 40.0%
GGTATGAATTATCTTGAGCC+TGG + chr8_3:67305133-67305152 None:intergenic 40.0%
!! ATCTGTAGTGCTTTGGAAGA+TGG + chr8_3:67305232-67305251 None:intergenic 40.0%
!! ATGGTTCTAAGGTGACAACT+AGG - chr8_3:67305320-67305339 Msa1303990:CDS 40.0%
! ATTTCAGGCATTGCTGAAGT+TGG - chr8_3:67305468-67305487 Msa1303990:CDS 40.0%
AAGCATTACTAGTGTCACCA+AGG + chr8_3:67305514-67305533 None:intergenic 40.0%
CCACAGAACCAAAAACAAGT+AGG + chr8_3:67305575-67305594 None:intergenic 40.0%
!!! CCTACTTGTTTTTGGTTCTG+TGG - chr8_3:67305572-67305591 Msa1303990:intron 40.0%
! CACCCTCGAAAATTTTCGAT+AGG + chr8_3:67305620-67305639 None:intergenic 40.0%
!! CTATCGAAAATTTTCGAGGG+TGG - chr8_3:67305618-67305637 Msa1303990:intron 40.0%
AAAAAGGTAGCAAAGGCAAG+TGG + chr8_3:67305651-67305670 None:intergenic 40.0%
ATACATCACGGAGAGGAAAA+AGG + chr8_3:67305667-67305686 None:intergenic 40.0%
GTGATGTATACGTGGAACTA+TGG - chr8_3:67305678-67305697 Msa1303990:intron 40.0%
!! ACAGTAAGAGTACCAGGAAT+AGG - chr8_3:67305780-67305799 Msa1303990:intron 40.0%
TAGAAGGAACTGCAGGAAAA+TGG + chr8_3:67305841-67305860 None:intergenic 40.0%
ACTACAATGGAATGAAGAGC+TGG + chr8_3:67305870-67305889 None:intergenic 40.0%
TTGGAGGGTAACTTAACTGA+TGG - chr8_3:67306107-67306126 Msa1303990:intron 40.0%
AGAATTTCTTGTATCCACCG+AGG + chr8_3:67306144-67306163 None:intergenic 40.0%
CTTAGGATTCCACTATTGCA+TGG - chr8_3:67306194-67306213 Msa1303990:intron 40.0%
ACCATCGAGTTATATGTCGT+CGG - chr8_3:67306274-67306293 Msa1303990:intron 40.0%
GAAAGCTCGTATTCTAGACT+AGG + chr8_3:67306308-67306327 None:intergenic 40.0%
TTCAGCTCTTAGAGAAGCAA+TGG - chr8_3:67306325-67306344 Msa1303990:intron 40.0%
! CTTAGAGAAGCAATGGATTC+AGG - chr8_3:67306332-67306351 Msa1303990:intron 40.0%
TCAGGATTCACCTATTTGCT+TGG - chr8_3:67306350-67306369 Msa1303990:CDS 40.0%
TTCACCTATTTGCTTGGACA+TGG - chr8_3:67306356-67306375 Msa1303990:CDS 40.0%
ATCTCCATGTCCAAGCAAAT+AGG + chr8_3:67306363-67306382 None:intergenic 40.0%
CATCCCCACTTGAATGATAT+TGG + chr8_3:67306498-67306517 None:intergenic 40.0%
TCAAGTGGGGATGACATATA+TGG - chr8_3:67306505-67306524 Msa1303990:CDS 40.0%
! TTTTACCAATCATCGCTGAC+GGG + chr8_3:67306626-67306645 None:intergenic 40.0%
! AGAAGGAAGTGTGAGGTTGT+TGG - chr8_3:67300988-67301007 Msa1303990:three_prime_UTR 45.0%
! GAAGGAAGTGTGAGGTTGTT+GGG - chr8_3:67300989-67301008 Msa1303990:three_prime_UTR 45.0%
ATTGGGATGAAGATCCTCCA+TGG - chr8_3:67301065-67301084 Msa1303990:CDS 45.0%
TCACTTCCATGATGAGACCA+TGG + chr8_3:67301085-67301104 None:intergenic 45.0%
TGGTCTCATCATGGAAGTGA+TGG - chr8_3:67301085-67301104 Msa1303990:CDS 45.0%
CATGGAAGTGATGGTAGAGA+AGG - chr8_3:67301094-67301113 Msa1303990:CDS 45.0%
AGTGATGGTAGAGAAGGGTA+TGG - chr8_3:67301100-67301119 Msa1303990:CDS 45.0%
TGGTCATGATCAACACTCCA+AGG - chr8_3:67301198-67301217 Msa1303990:CDS 45.0%
TGGGGACATTTAACGTGCTA+GGG - chr8_3:67301342-67301361 Msa1303990:CDS 45.0%
!! GAAATAGCGGATAACGTTGC+AGG - chr8_3:67301786-67301805 Msa1303990:CDS 45.0%
TGAATCAGGACCTTTCCCTT+TGG - chr8_3:67302018-67302037 Msa1303990:CDS 45.0%
CAATTGTAGGCCAAAGGGAA+AGG + chr8_3:67302031-67302050 None:intergenic 45.0%
! TTTTGCTGGTGTCTTCAGCA+AGG - chr8_3:67302112-67302131 Msa1303990:intron 45.0%
ACTCAGATGACGATGTCTTG+GGG - chr8_3:67302144-67302163 Msa1303990:intron 45.0%
!! TCATCAGCTTGTTGGCGATT+CGG + chr8_3:67302389-67302408 None:intergenic 45.0%
TTCCTACTCCTGAACTCGAA+AGG - chr8_3:67302435-67302454 Msa1303990:CDS 45.0%
TCCTACTCCTGAACTCGAAA+GGG - chr8_3:67302436-67302455 Msa1303990:CDS 45.0%
GTGCCTGTGAGTGCTAAAAT+TGG + chr8_3:67302684-67302703 None:intergenic 45.0%
CGCTTGTAGTGCCAGAAATT+AGG + chr8_3:67302804-67302823 None:intergenic 45.0%
ACCATACCAAGTCTCCTTTG+TGG - chr8_3:67302847-67302866 Msa1303990:CDS 45.0%
CCATACCAAGTCTCCTTTGT+GGG - chr8_3:67302848-67302867 Msa1303990:CDS 45.0%
CATACCAAGTCTCCTTTGTG+GGG - chr8_3:67302849-67302868 Msa1303990:CDS 45.0%
!! TGTCTAGTCTTGAGCATGAC+AGG - chr8_3:67303492-67303511 Msa1303990:CDS 45.0%
CGGCCATATCTCATTTCATG+TGG + chr8_3:67303533-67303552 None:intergenic 45.0%
! GCATCCCTTACTGATTAAGC+CGG - chr8_3:67303576-67303595 Msa1303990:intron 45.0%
!! TTGCAGGGATTTTGACCTCA+AGG + chr8_3:67303682-67303701 None:intergenic 45.0%
GAGATCTCAGAGATCTTGCA+GGG + chr8_3:67303697-67303716 None:intergenic 45.0%
TGAGATCTCAGAGATCTTGC+AGG + chr8_3:67303698-67303717 None:intergenic 45.0%
AGTAGGTCGACTATGGTTGA+TGG - chr8_3:67303745-67303764 Msa1303990:intron 45.0%
AGCATTCAACAGTTCGGTAC+TGG - chr8_3:67304045-67304064 Msa1303990:intron 45.0%
! AAAAGTGCATGGTCAGCTCT+TGG - chr8_3:67304216-67304235 Msa1303990:intron 45.0%
GGTTGTGTTCTGTGCATTAC+AGG - chr8_3:67304240-67304259 Msa1303990:intron 45.0%
ACGGTCCTTCAAACTACCAA+CGG - chr8_3:67304755-67304774 Msa1303990:intron 45.0%
!! ACTGACCGTTGGTAGTTTGA+AGG + chr8_3:67304763-67304782 None:intergenic 45.0%
GACAACTAGGATGCTTGCAA+AGG - chr8_3:67305333-67305352 Msa1303990:CDS 45.0%
!! TGCTGAAGTTGGTGTGATGA+TGG - chr8_3:67305479-67305498 Msa1303990:CDS 45.0%
CATTACTAGTGTCACCAAGG+TGG + chr8_3:67305511-67305530 None:intergenic 45.0%
GGAGAGGAAAAAGGTAGCAA+AGG + chr8_3:67305658-67305677 None:intergenic 45.0%
!! GAGTGTCTTGAAGTACCGAA+GGG - chr8_3:67305701-67305720 Msa1303990:intron 45.0%
AGGAACTGCAGGAAAATGGA+GGG + chr8_3:67305837-67305856 None:intergenic 45.0%
AAGGAACTGCAGGAAAATGG+AGG + chr8_3:67305838-67305857 None:intergenic 45.0%
CAATGGAATGAAGAGCTGGA+AGG + chr8_3:67305866-67305885 None:intergenic 45.0%
TCTTGAGGAACCACAGGAAT+CGG + chr8_3:67305915-67305934 None:intergenic 45.0%
CTTTCTTCTTGAGGAACCAC+AGG + chr8_3:67305921-67305940 None:intergenic 45.0%
! ATATGTTCCGCTGTGTTGCT+AGG - chr8_3:67305976-67305995 Msa1303990:intron 45.0%
GGTACGGTTACAAAGACGTT+CGG - chr8_3:67305997-67306016 Msa1303990:intron 45.0%
! GGGTAACTTAACTGATGGTG+TGG - chr8_3:67306112-67306131 Msa1303990:intron 45.0%
ATTTCTTGTATCCACCGAGG+CGG + chr8_3:67306141-67306160 None:intergenic 45.0%
TCTGATCTTGCAGCCAGTAA+TGG - chr8_3:67306161-67306180 Msa1303990:intron 45.0%
AAGCTCTTCTGCTCCATTAC+TGG + chr8_3:67306177-67306196 None:intergenic 45.0%
! GTAATGGAGCAGAAGAGCTT+AGG - chr8_3:67306177-67306196 Msa1303990:intron 45.0%
GGAACTTCTACCTCACATGA+AGG - chr8_3:67306236-67306255 Msa1303990:intron 45.0%
TCCGACGACATATAACTCGA+TGG + chr8_3:67306278-67306297 None:intergenic 45.0%
CTAAGAAAGAACTGCAGAGG+AGG - chr8_3:67306446-67306465 Msa1303990:CDS 45.0%
AGGTTGTTGGGAAGTAGCAG+TGG - chr8_3:67301001-67301020 Msa1303990:three_prime_UTR 50.0%
TTGTTGGGAAGTAGCAGTGG+TGG - chr8_3:67301004-67301023 Msa1303990:three_prime_UTR 50.0%
TGTTGGGAAGTAGCAGTGGT+GGG - chr8_3:67301005-67301024 Msa1303990:three_prime_UTR 50.0%
TGGGAGTAGTGAGTCTAGGT+GGG - chr8_3:67301024-67301043 Msa1303990:exon 50.0%
!! AGTGAGTCTAGGTGGGTTGA+TGG - chr8_3:67301031-67301050 Msa1303990:exon 50.0%
GATCCTCCATGGTCTCATCA+TGG - chr8_3:67301076-67301095 Msa1303990:CDS 50.0%
CTTCCATGATGAGACCATGG+AGG + chr8_3:67301082-67301101 None:intergenic 50.0%
GAAGCTATGGAGATTGCTGC+TGG - chr8_3:67301178-67301197 Msa1303990:CDS 50.0%
GTGGGGACATTTAACGTGCT+AGG - chr8_3:67301341-67301360 Msa1303990:CDS 50.0%
TGCCCTAAATGCGGAGAAGA+TGG + chr8_3:67301381-67301400 None:intergenic 50.0%
! CTCCGCATTTAGGGCATGTT+TGG - chr8_3:67301385-67301404 Msa1303990:CDS 50.0%
ACACACACTAAGGGCCTGTT+TGG + chr8_3:67301638-67301657 None:intergenic 50.0%
CTCAGATGACGATGTCTTGG+GGG - chr8_3:67302145-67302164 Msa1303990:intron 50.0%
!! CGCTGTACTCGCTGATTTGT+AGG - chr8_3:67302342-67302361 Msa1303990:CDS 50.0%
! CTATGGTGGCGCCTAATTTC+TGG - chr8_3:67302790-67302809 Msa1303990:intron 50.0%
CTACAAGCGCCACCTAAATG+AGG - chr8_3:67302815-67302834 Msa1303990:intron 50.0%
! CCCACAAAGGAGACTTGGTA+TGG + chr8_3:67302851-67302870 None:intergenic 50.0%
!! ACTGCAACAAAGAAGCGCCA+TGG + chr8_3:67303058-67303077 None:intergenic 50.0%
GCAGTGATGTCTGCCATAAG+TGG - chr8_3:67303073-67303092 Msa1303990:CDS 50.0%
GTCTGCCATAAGTGGTCTAC+AGG - chr8_3:67303081-67303100 Msa1303990:CDS 50.0%
TTGGCTCAGTAGGTCGACTA+TGG - chr8_3:67303738-67303757 Msa1303990:intron 50.0%
GAATGCTGAACAAAGCCACG+AGG + chr8_3:67304032-67304051 None:intergenic 50.0%
!! ACAGTTCGGTACTGGCAAAG+TGG - chr8_3:67304053-67304072 Msa1303990:intron 50.0%
!! CAGTTCGGTACTGGCAAAGT+GGG - chr8_3:67304054-67304073 Msa1303990:intron 50.0%
TCGCCCCTGTACTTGCTTTA+TGG - chr8_3:67304085-67304104 Msa1303990:intron 50.0%
CTTGGCCCATATAAGCAAGG+AGG + chr8_3:67304647-67304666 None:intergenic 50.0%
CAGCTTGGCCCATATAAGCA+AGG + chr8_3:67304650-67304669 None:intergenic 50.0%
!! GTTGGTAGTTTGAAGGACCG+TGG + chr8_3:67304756-67304775 None:intergenic 50.0%
CAACACAGAGCACAAACAGC+AGG + chr8_3:67304988-67305007 None:intergenic 50.0%
! GATGATGGTTAGCACCACCT+TGG - chr8_3:67305494-67305513 Msa1303990:CDS 50.0%
!! CGAAAATTTTCGAGGGTGGC+TGG - chr8_3:67305622-67305641 Msa1303990:intron 50.0%
TCCTCTCCGTGATGTATACG+TGG - chr8_3:67305670-67305689 Msa1303990:intron 50.0%
TCCACGTATACATCACGGAG+AGG + chr8_3:67305674-67305693 None:intergenic 50.0%
!! GGAGTGTCTTGAAGTACCGA+AGG - chr8_3:67305700-67305719 Msa1303990:intron 50.0%
GGAAAATGGAGGGAACACCT+TGG + chr8_3:67305827-67305846 None:intergenic 50.0%
GAAGGCTTAGAAGGAACTGC+AGG + chr8_3:67305848-67305867 None:intergenic 50.0%
GAAGAGCTGGAAGGCTTAGA+AGG + chr8_3:67305857-67305876 None:intergenic 50.0%
! TTCCGCTGTGTTGCTAGGTA+CGG - chr8_3:67305981-67306000 Msa1303990:intron 50.0%
AACCGTACCTAGCAACACAG+CGG + chr8_3:67305986-67306005 None:intergenic 50.0%
CGGTTACAAAGACGTTCGGA+AGG - chr8_3:67306001-67306020 Msa1303990:intron 50.0%
GTTAGAAGCTGCGTTGGAGT+TGG - chr8_3:67306088-67306107 Msa1303990:intron 50.0%
TGTTGACGCACCTTCATGTG+AGG + chr8_3:67306249-67306268 None:intergenic 50.0%
! CTTTTCCCGTCAGCGATGAT+TGG - chr8_3:67306618-67306637 Msa1303990:five_prime_UTR 50.0%
! GTGGTGGGAGTAGTGAGTCT+AGG - chr8_3:67301020-67301039 Msa1303990:exon 55.0%
GTGGGAGTAGTGAGTCTAGG+TGG - chr8_3:67301023-67301042 Msa1303990:exon 55.0%
TGGGAATGGAGGCAGAGCAT+AGG - chr8_3:67301860-67301879 Msa1303990:CDS 55.0%
!! GCCCTTTCGAGTTCAGGAGT+AGG + chr8_3:67302440-67302459 None:intergenic 55.0%
GCTTGCGTACCTGATATCGC+TGG + chr8_3:67302569-67302588 None:intergenic 55.0%
GCATCCCCACAAAGGAGACT+TGG + chr8_3:67302856-67302875 None:intergenic 55.0%
CCACAACTGCATCCCCACAA+AGG + chr8_3:67302864-67302883 None:intergenic 55.0%
CCTTTGTGGGGATGCAGTTG+TGG - chr8_3:67302861-67302880 Msa1303990:CDS 55.0%
! CATCTAGAGCGTGACCTGAG+AGG + chr8_3:67303474-67303493 None:intergenic 55.0%
AGTGCATGGTCAGCTCTTGG+TGG - chr8_3:67304219-67304238 Msa1303990:intron 55.0%
!! GGAAGCGTTAGAAGCTGCGT+TGG - chr8_3:67306082-67306101 Msa1303990:intron 55.0%
AGAAGCTGCGTTGGAGTTGG+AGG - chr8_3:67306091-67306110 Msa1303990:intron 55.0%
GAAGCTGCGTTGGAGTTGGA+GGG - chr8_3:67306092-67306111 Msa1303990:intron 55.0%
CACCTGCTGTCAGACCTCTC+AGG - chr8_3:67303457-67303476 Msa1303990:CDS 60.0%
GACCTGAGAGGTCTGACAGC+AGG + chr8_3:67303462-67303481 None:intergenic 60.0%
!! TGGCTTTGGGATGCTTCCCC+AGG - chr8_3:67305112-67305131 Msa1303990:CDS 60.0%
! TGATGGTGTGGACACCGCCT+CGG - chr8_3:67306124-67306143 Msa1303990:intron 60.0%
TGGTGTGGACACCGCCTCGG+TGG - chr8_3:67306127-67306146 Msa1303990:intron 70.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 67300779 67306789 67300779 ID=Msa1303990;Name=Msa1303990
chr8_3 mRNA 67300779 67306789 67300779 ID=Msa1303990-mRNA-1;Parent=Msa1303990;Name=Msa1303990-mRNA-1;_AED=0.14;_eAED=0.14;_QI=189|1|1|1|1|1|9|257|840
chr8_3 exon 67300779 67302093 67300779 ID=Msa1303990-mRNA-1:exon:20636;Parent=Msa1303990-mRNA-1
chr8_3 exon 67302301 67302555 67302301 ID=Msa1303990-mRNA-1:exon:20635;Parent=Msa1303990-mRNA-1
chr8_3 exon 67302842 67302956 67302842 ID=Msa1303990-mRNA-1:exon:20634;Parent=Msa1303990-mRNA-1
chr8_3 exon 67303060 67303112 67303060 ID=Msa1303990-mRNA-1:exon:20633;Parent=Msa1303990-mRNA-1
chr8_3 exon 67303307 67303567 67303307 ID=Msa1303990-mRNA-1:exon:20632;Parent=Msa1303990-mRNA-1
chr8_3 exon 67304441 67304491 67304441 ID=Msa1303990-mRNA-1:exon:20631;Parent=Msa1303990-mRNA-1
chr8_3 exon 67304990 67305238 67304990 ID=Msa1303990-mRNA-1:exon:20630;Parent=Msa1303990-mRNA-1
chr8_3 exon 67305314 67305542 67305314 ID=Msa1303990-mRNA-1:exon:20629;Parent=Msa1303990-mRNA-1
chr8_3 exon 67306349 67306789 67306349 ID=Msa1303990-mRNA-1:exon:20628;Parent=Msa1303990-mRNA-1
chr8_3 five_prime_UTR 67306601 67306789 67306601 ID=Msa1303990-mRNA-1:five_prime_utr;Parent=Msa1303990-mRNA-1
chr8_3 CDS 67306349 67306600 67306349 ID=Msa1303990-mRNA-1:cds;Parent=Msa1303990-mRNA-1
chr8_3 CDS 67305314 67305542 67305314 ID=Msa1303990-mRNA-1:cds;Parent=Msa1303990-mRNA-1
chr8_3 CDS 67304990 67305238 67304990 ID=Msa1303990-mRNA-1:cds;Parent=Msa1303990-mRNA-1
chr8_3 CDS 67304441 67304491 67304441 ID=Msa1303990-mRNA-1:cds;Parent=Msa1303990-mRNA-1
chr8_3 CDS 67303307 67303567 67303307 ID=Msa1303990-mRNA-1:cds;Parent=Msa1303990-mRNA-1
chr8_3 CDS 67303060 67303112 67303060 ID=Msa1303990-mRNA-1:cds;Parent=Msa1303990-mRNA-1
chr8_3 CDS 67302842 67302956 67302842 ID=Msa1303990-mRNA-1:cds;Parent=Msa1303990-mRNA-1
chr8_3 CDS 67302301 67302555 67302301 ID=Msa1303990-mRNA-1:cds;Parent=Msa1303990-mRNA-1
chr8_3 CDS 67301036 67302093 67301036 ID=Msa1303990-mRNA-1:cds;Parent=Msa1303990-mRNA-1
chr8_3 three_prime_UTR 67300779 67301035 67300779 ID=Msa1303990-mRNA-1:three_prime_utr;Parent=Msa1303990-mRNA-1
Gene Sequence

>Msa1303990

ATGAAGTTGGATAAGATTGAAGAAGGAAGTGTGAGGTTGTTGGGAAGTAGCAGTGGTGGGAGTAGTGAGTCTAGGTGGGTTGATGGAAGTGAAGTTGATTGGGATGAAGATCCTCCATGGTCTCATCATGGAAGTGATGGTAGAGAAGGGTATGGTTCAATTAGGAGAAGGCTTGTTAAGAAACCTAAAAGGGTTGACTCTTTTGATGTTGAAGCTATGGAGATTGCTGCTGGTCATGATCAACACTCCAAGGACCTTTCCCTTTGGCCTACAATTGCATTAGCATTTCAGACTCTTGGTGTTGTATATGGTGACATGGGAACAAGTCCTCTTTATGTTTTTGCTGGTGTCTTCAGCAAGGTTCCTATTAACTCAGATGACGATGTCTTGGGGGCGTTATCGTTAGTAATGTACACAATAGCGCTTATTCCATTAGCAAAATATGTTTTTATAGTTCTCAAAGCTAATGATAATGGAGAAGGAGGAACATTTGCGCTGTACTCGCTGATTTGTAGGTATGCAAATGTGAATCTGCTTCCGAATCGCCAACAAGCTGATGAACAAATCTCTAGTTTTAAGCTCAAACTTCCTACTCCTGAACTCGAAAGGGCTTTAAAAATAAAGGAGACTTTGGAAAGGACGTCGATCATGAAAAACGTGTTGTTAGTGTTGGTTCTTCTTGGAACTTCTATGATTATTGGTGATGGTATTCTAACTCCAGCGATATCAGTGATGTCTGCCATAAGTGGTCTACAGGATCAAATAAATGGATTTGGTACAGCTGAAGTGGTTAGTATATCTATTTTAGTCCTCGTGGCTTTGTTCAGCATTCAACAGTTCGGTACTGGCAAAGTGGGTTTCATGTTCGCCCCTGTACTTGCTTTATGGTTCTTTTCTCTGGGTTCTATTGGAATATATAATATACTTAAATATGATATTACTGTTGTGAGAGCACTCAACCCAGCATATATCTATTATTTCTTCAAGAATAATGGCAAAAGTGCATGGTCAGCTCTTGGTGGTTGTGTTCTGTGCATTACAGGTGCAGAAGCAATGTTTGCAGATCTTGGACATTTTACTGTACCAGCAATACAGATTGCTTTCACTTGTGTGGTATTTCCATGTCTCCTCCTTGCTTATATGGGCCAAGCTGCTTTTCTGATGAAAAATCCTGCGTCTTATTCAAGTGTATTCTTCAAATCTGTTCCAGAGAGTCTATTCTGGCCAGTGTTTGTTATAGCTACACTTGGTGCTATGATTGCAAGTCAAGCAATGATATCTGCTACTTTTTCGTGCGTTAAGCAATCAATGGCTTTGGGATGCTTCCCCAGGCTCAAGATAATTCATACCTCAAAAAAGTTCATGGGTCAAATTTACATCCCTGTTATTAATTGGTTTCTGATGATTATGTGCATCGTTGTCGTTTCCATCTTCCAAAGCACTACAGATATTGCAAATGCATATGGCATTGCTGAAGTTGGTGTGATGATGGTTAGCACCACCTTGGTGACACTAGTAATGCTTTTAATTTGGCAGACAAACTTGTTTTTAGCATTTTGTTTCCTACTTGTTTTTGGTTCTGTGGAGCTCATTTTCATGTCTTCAGTCCTATCGAAAATTTTCGAGGGTGGCTGGCTTCCACTTGCCTTTGCTACCTTTTTCCTCTCCGTGATGTATACGTGGAACTATGGGAGTGTCTTGAAGTACCGAAGGGAAGTAAGAGAAAAAGTTTCAATGGACTTAATGCTTGATCTTGGTTCCAATCTTGGAACAGTAAGAGTACCAGGAATAGGATTGCTATATAATGAGCTTGTCCAAGGTGTTCCCTCCATTTTCCTGCAGTTCCTTCTAAGCCTTCCAGCTCTTCATTCCATTGTAGTTTTTGTCTGCATTAAATATGTTCCGATTCCTGTGGTTCCTCAAGAAGAAAGATTTTTATTCCGAAGAGTATGTCCGAAAGATTATCATATGTTCCGCTGTGTTGCTAGGTACGGTTACAAAGACGTTCGGAAGGAAGATCACCATGCATTTGAGCAACTTCTTATGGAAAGTCTTGAGAAATTCTTGAGAAGGGAAGCGTTAGAAGCTGCGTTGGAGTTGGAGGGTAACTTAACTGATGGTGTGGACACCGCCTCGGTGGATACAAGAAATTCTGATCTTGCAGCCAGTAATGGAGCAGAAGAGCTTAGGATTCCACTATTGCATGGTCAGAATTTAGAAGAAACAGGAACTTCTACCTCACATGAAGGTGCGTCAACATTATTACCATCGAGTTATATGTCGTCGGATGAAGATCCTAGTCTAGAATACGAGCTTTCAGCTCTTAGAGAAGCAATGGATTCAGGATTCACCTATTTGCTTGGACATGGAGATGTGAAAGCAAAGAAGAACTCTTTTTTCTTTAAGAAATTGGTTATAAACTATTTCTATGCATTTCTAAGAAAGAACTGCAGAGGAGGTACTGCAAATATGAAAGTACCTCACACCAATATCATTCAAGTGGGGATGACATATATGGTCTGA
Protein sequence

>Msa1303990

MKLDKIEEGSVRLLGSSSGGSSESRWVDGSEVDWDEDPPWSHHGSDGREGYGSIRRRLVKKPKRVDSFDVEAMEIAAGHDQHSKDLSLWPTIALAFQTLGVVYGDMGTSPLYVFAGVFSKVPINSDDDVLGALSLVMYTIALIPLAKYVFIVLKANDNGEGGTFALYSLICRYANVNLLPNRQQADEQISSFKLKLPTPELERALKIKETLERTSIMKNVLLVLVLLGTSMIIGDGILTPAISVMSAISGLQDQINGFGTAEVVSISILVLVALFSIQQFGTGKVGFMFAPVLALWFFSLGSIGIYNILKYDITVVRALNPAYIYYFFKNNGKSAWSALGGCVLCITGAEAMFADLGHFTVPAIQIAFTCVVFPCLLLAYMGQAAFLMKNPASYSSVFFKSVPESLFWPVFVIATLGAMIASQAMISATFSCVKQSMALGCFPRLKIIHTSKKFMGQIYIPVINWFLMIMCIVVVSIFQSTTDIANAYGIAEVGVMMVSTTLVTLVMLLIWQTNLFLAFCFLLVFGSVELIFMSSVLSKIFEGGWLPLAFATFFLSVMYTWNYGSVLKYRREVREKVSMDLMLDLGSNLGTVRVPGIGLLYNELVQGVPSIFLQFLLSLPALHSIVVFVCIKYVPIPVVPQEERFLFRRVCPKDYHMFRCVARYGYKDVRKEDHHAFEQLLMESLEKFLRREALEAALELEGNLTDGVDTASVDTRNSDLAASNGAEELRIPLLHGQNLEETGTSTSHEGASTLLPSSYMSSDEDPSLEYELSALREAMDSGFTYLLGHGDVKAKKNSFFFKKLVINYFYAFLRKNCRGGTANMKVPHTNIIQVGMTYMV*