Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1198040 | XP_013446074.1 | 98.503 | 334 | 5 | 0 | 1 | 334 | 1 | 334 | 0.0 | 674 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1198040 | sp|Q9LYK6|APRF1_ARATH | 49.201 | 313 | 152 | 4 | 15 | 323 | 5 | 314 | 1.40e-108 | 322 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0191050 | Msa1198040 | 0.807882 | 4.067181e-50 | -8.615850e-47 |
| Msa1012320 | Msa1198040 | 0.800003 | 1.766751e-48 | -8.615850e-47 |
| Msa1198040 | Msa1251730 | 0.912105 | 2.849816e-83 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1198040 | MtrunA17_Chr8g0367211 | 98.503 | 334 | 5 | 0 | 1 | 334 | 1 | 334 | 0.0 | 674 |
| Msa1198040 | MtrunA17_Chr6g0451371 | 49.682 | 314 | 149 | 5 | 15 | 323 | 7 | 316 | 1.29e-108 | 320 |
| Msa1198040 | MtrunA17_Chr4g0067151 | 25.097 | 259 | 174 | 6 | 37 | 282 | 30 | 281 | 4.71e-18 | 83.6 |
| Msa1198040 | MtrunA17_Chr1g0185501 | 22.709 | 251 | 179 | 6 | 37 | 281 | 30 | 271 | 2.51e-13 | 69.7 |
| Msa1198040 | MtrunA17_Chr8g0383711 | 21.069 | 318 | 217 | 7 | 16 | 320 | 1 | 297 | 2.49e-12 | 66.6 |
| Msa1198040 | MtrunA17_Chr2g0281451 | 22.134 | 253 | 148 | 3 | 44 | 296 | 26 | 229 | 1.43e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1198040 | AT5G66240.2 | 76.220 | 328 | 76 | 1 | 7 | 334 | 6 | 331 | 0.0 | 520 |
| Msa1198040 | AT5G66240.1 | 76.220 | 328 | 76 | 1 | 7 | 334 | 3 | 328 | 0.0 | 519 |
| Msa1198040 | AT5G66240.3 | 75.915 | 328 | 75 | 2 | 7 | 334 | 3 | 326 | 0.0 | 514 |
| Msa1198040 | AT5G14530.1 | 49.201 | 313 | 152 | 4 | 15 | 323 | 5 | 314 | 1.42e-109 | 322 |
| Msa1198040 | AT3G49660.1 | 23.106 | 264 | 187 | 6 | 28 | 282 | 18 | 274 | 1.61e-16 | 79.3 |
| Msa1198040 | AT5G50230.1 | 25.725 | 276 | 178 | 10 | 33 | 296 | 224 | 484 | 1.69e-11 | 65.5 |
| Msa1198040 | AT4G02730.1 | 21.456 | 261 | 189 | 7 | 29 | 282 | 38 | 289 | 1.94e-11 | 64.7 |
Find 94 sgRNAs with CRISPR-Local
Find 544 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTGTTATAGATGTTATT+TGG | 0.214119 | 8_1:+49356728 | Msa1198040:three_prime_UTR |
| CGGAAAGATTGCTTTATATC+TGG | 0.240503 | 8_1:+49352859 | Msa1198040:CDS |
| GGTCGTCTGAGTTGTCATTT+TGG | 0.247142 | 8_1:+49356480 | Msa1198040:CDS |
| AAAAGAAGAGAAAGTTTCTT+TGG | 0.262615 | 8_1:+49350279 | Msa1198040:CDS |
| CCTGTTGTGAAGTGGGCTCC+TGG | 0.269841 | 8_1:+49356437 | Msa1198040:CDS |
| CTTGTCTTTGCAATAGCCTT+TGG | 0.292670 | 8_1:+49353091 | Msa1198040:CDS |
| GTTCCAGATTTGTCTAAAAT+AGG | 0.301366 | 8_1:+49356503 | Msa1198040:CDS |
| ACAATTAACAGTAAGAAATA+TGG | 0.302081 | 8_1:+49352491 | Msa1198040:CDS |
| TAGATCGAACTGTCTTACTA+TGG | 0.320296 | 8_1:+49352887 | Msa1198040:CDS |
| TAAGAAATATGGGGTTGATT+TGG | 0.325685 | 8_1:+49352502 | Msa1198040:CDS |
| TAGGGACTGCTACATGTAAA+AGG | 0.336014 | 8_1:+49353037 | Msa1198040:intron |
| GGGTGTCTTATGTTTGCAAC+CGG | 0.337184 | 8_1:+49356458 | Msa1198040:CDS |
| AGAAGTGCAACTTCTGATAT+TGG | 0.340448 | 8_1:+49356410 | Msa1198040:CDS |
| TATCTCAACTTGTACGGTTC+AGG | 0.358603 | 8_1:-49356676 | None:intergenic |
| GAAGAGTAAATGACAGTTGT+AGG | 0.363134 | 8_1:-49352542 | None:intergenic |
| TGAAGAAATTCTTCTCAGTA+TGG | 0.369274 | 8_1:+49350309 | Msa1198040:CDS |
| GGAAATGCACCTTGCAATCA+AGG | 0.393441 | 8_1:-49356775 | None:intergenic |
| GTCATTTACTCTTCTAAGAA+TGG | 0.397390 | 8_1:+49352551 | Msa1198040:CDS |
| AAACTGCAGACTGGTGCATT+TGG | 0.401412 | 8_1:-49356796 | None:intergenic |
| CGATTATACGATGTTGCTGC+TGG | 0.402567 | 8_1:+49350548 | Msa1198040:CDS |
| CAATTAACAGTAAGAAATAT+GGG | 0.412574 | 8_1:+49352492 | Msa1198040:CDS |
| GATATTACAAACATTCCATC+AGG | 0.414077 | 8_1:-49353570 | None:intergenic |
| GTTGGTGTTTGAAATGTTGA+TGG | 0.416516 | 8_1:-49350127 | None:intergenic |
| CAATTAATCCAGAATCTTTG+CGG | 0.422549 | 8_1:+49352660 | Msa1198040:intron |
| TATGATGTACCACCCATTGT+TGG | 0.433711 | 8_1:-49350163 | None:intergenic |
| AAAATTATGCGTCATGTTCA+CGG | 0.434489 | 8_1:+49356831 | Msa1198040:three_prime_UTR |
| TTACTCTTCTAAGAATGGTT+GGG | 0.437485 | 8_1:+49352556 | Msa1198040:CDS |
| GTTGTGAAGTTTAGTAATGA+TGG | 0.438641 | 8_1:+49353309 | Msa1198040:CDS |
| TTTACTCTTCTAAGAATGGT+TGG | 0.439307 | 8_1:+49352555 | Msa1198040:CDS |
| AAATGCACCAGTCTGCAGTT+TGG | 0.443017 | 8_1:+49356798 | Msa1198040:three_prime_UTR |
| ACAAAATATAATCTTTCAGT+TGG | 0.445088 | 8_1:-49356586 | None:intergenic |
| CCAGGAGCCCACTTCACAAC+AGG | 0.448387 | 8_1:-49356437 | None:intergenic |
| GTCTTTGCAATAGCCTTTGG+AGG | 0.450259 | 8_1:+49353094 | Msa1198040:CDS |
| GCATCTATGCATGGAGTGTT+CGG | 0.452367 | 8_1:+49353863 | Msa1198040:CDS |
| GAATGGTAGAATTAGTTCAA+TGG | 0.453487 | 8_1:+49350472 | Msa1198040:intron |
| GCTATATCATATGATGATCA+AGG | 0.454978 | 8_1:+49353067 | Msa1198040:CDS |
| ATTGGTTACGTAATCTTTGA+AGG | 0.456413 | 8_1:-49350344 | None:intergenic |
| ATTCTTCTCAGTATGGAAGT+TGG | 0.458720 | 8_1:+49350316 | Msa1198040:CDS |
| TCTCACTTAGCTTGTGCCCT+CGG | 0.462762 | 8_1:+49352839 | Msa1198040:CDS |
| GAGAAATTCATCTCCAACAA+TGG | 0.468290 | 8_1:+49350150 | Msa1198040:exon |
| CTGTTGTGAAGTGGGCTCCT+GGG | 0.468579 | 8_1:+49356438 | Msa1198040:CDS |
| GAAGCTTCTTTCAGCCCTGA+TGG | 0.487569 | 8_1:+49353555 | Msa1198040:CDS |
| ATTTCAAAGGTCATCATGAC+AGG | 0.487653 | 8_1:+49352717 | Msa1198040:CDS |
| CTGTCTTACTATGGGATCAA+AGG | 0.490177 | 8_1:+49352896 | Msa1198040:CDS |
| AATGTGGAGTTGCATGAGAC+AGG | 0.500959 | 8_1:-49353531 | None:intergenic |
| TTCTTCAAGCTGTGTGCTTG+AGG | 0.501503 | 8_1:+49350071 | Msa1198040:five_prime_UTR |
| CCAACAGAAAATAGCTCAAA+GGG | 0.507318 | 8_1:-49353264 | None:intergenic |
| TGTCTTACTATGGGATCAAA+GGG | 0.508849 | 8_1:+49352897 | Msa1198040:CDS |
| TGTAAATATGCTTCTCCAGT+AGG | 0.511618 | 8_1:+49356638 | Msa1198040:three_prime_UTR |
| AGGCTCTCTGAAATACCTAC+TGG | 0.518148 | 8_1:-49356653 | None:intergenic |
| TGATCATCATATGATATAGC+AGG | 0.520909 | 8_1:-49353064 | None:intergenic |
| AGAAATTCATCTCCAACAAT+GGG | 0.521978 | 8_1:+49350151 | Msa1198040:exon |
| AACATATATCTCAACTTGTA+CGG | 0.524420 | 8_1:-49356682 | None:intergenic |
| TGGACCTCCTGTTGTGAAGT+GGG | 0.526483 | 8_1:+49356430 | Msa1198040:CDS |
| TTGGACCTCCTGTTGTGAAG+TGG | 0.527754 | 8_1:+49356429 | Msa1198040:CDS |
| CACCAGTCTGCAGTTTGGTA+TGG | 0.530215 | 8_1:+49356803 | Msa1198040:three_prime_UTR |
| ATCCTTTGTAGGTTGCAAGT+TGG | 0.532422 | 8_1:+49356387 | Msa1198040:intron |
| GAGTGTTCGGAGTGGTATAG+AGG | 0.534758 | 8_1:+49353876 | Msa1198040:CDS |
| CAAACCATGGCAAAGTTTGT+CGG | 0.541810 | 8_1:-49356617 | None:intergenic |
| TTATAATAGTATCTTAGTAA+TGG | 0.550098 | 8_1:+49356751 | Msa1198040:three_prime_UTR |
| AGTAATGGTCCTTGATTGCA+AGG | 0.551119 | 8_1:+49356766 | Msa1198040:three_prime_UTR |
| TGATGCAAGGATGTATGAAA+AGG | 0.555429 | 8_1:+49353132 | Msa1198040:CDS |
| GACCATACCAAACTGCAGAC+TGG | 0.557686 | 8_1:-49356805 | None:intergenic |
| CATGTTCTTGACTCATTCCG+TGG | 0.558750 | 8_1:+49353369 | Msa1198040:CDS |
| GGTGTCTTATGTTTGCAACC+GGG | 0.560432 | 8_1:+49356459 | Msa1198040:CDS |
| AGATCGAACTGTCTTACTAT+GGG | 0.561068 | 8_1:+49352888 | Msa1198040:CDS |
| ATGCTTGTAACAACTACAGA+TGG | 0.562578 | 8_1:+49353339 | Msa1198040:CDS |
| CATTCTTATGTATCCTCCAA+AGG | 0.566077 | 8_1:-49353107 | None:intergenic |
| TCAAAGGGCTGAGAAGTGCC+AGG | 0.573372 | 8_1:+49352912 | Msa1198040:CDS |
| TCTTCTAAGAATGGTTGGGA+TGG | 0.584514 | 8_1:+49352560 | Msa1198040:CDS |
| GTTGGAGATGAATTTCTCGT+TGG | 0.584671 | 8_1:-49350145 | None:intergenic |
| CCCAACAGAAAATAGCTCAA+AGG | 0.587621 | 8_1:-49353265 | None:intergenic |
| CTCAACTTGTACGGTTCAGG+AGG | 0.588891 | 8_1:-49356673 | None:intergenic |
| CCTACCGACAAACTTTGCCA+TGG | 0.599778 | 8_1:+49356613 | Msa1198040:three_prime_UTR |
| CCATGGCAAAGTTTGTCGGT+AGG | 0.600580 | 8_1:-49356613 | None:intergenic |
| AGAAGCATATTTACAAACCA+TGG | 0.603096 | 8_1:-49356630 | None:intergenic |
| GACTGCTACATGTAAAAGGA+AGG | 0.605203 | 8_1:+49353041 | Msa1198040:CDS |
| ACATAAGAATGTTTGATGCA+AGG | 0.607701 | 8_1:+49353119 | Msa1198040:CDS |
| GATATAAAGCAATCTTTCCG+AGG | 0.609971 | 8_1:-49352856 | None:intergenic |
| CTATATCATATGATGATCAA+GGG | 0.613814 | 8_1:+49353068 | Msa1198040:CDS |
| CACGGAATGAGTCAAGAACA+TGG | 0.614842 | 8_1:-49353368 | None:intergenic |
| TTGTGAAGTTTAGTAATGAT+GGG | 0.620333 | 8_1:+49353310 | Msa1198040:CDS |
| AAATGACAACTCAGACGACC+CGG | 0.623032 | 8_1:-49356477 | None:intergenic |
| AGCAACATCGTATAATCGAA+TGG | 0.626818 | 8_1:-49350543 | None:intergenic |
| ATATTACAAACATTCCATCA+GGG | 0.635195 | 8_1:-49353569 | None:intergenic |
| GCTGAAAGAAGCTTCTAATG+TGG | 0.636195 | 8_1:-49353547 | None:intergenic |
| AATTCATCTCCAACAATGGG+TGG | 0.642051 | 8_1:+49350154 | Msa1198040:exon |
| ATATAAAGCAATCTTTCCGA+GGG | 0.646756 | 8_1:-49352855 | None:intergenic |
| AAGTACTTGAGATATTTCAA+AGG | 0.658561 | 8_1:+49352704 | Msa1198040:CDS |
| GGAGCCCACTTCACAACAGG+AGG | 0.673541 | 8_1:-49356434 | None:intergenic |
| GTTGCAAACATAAGACACCC+AGG | 0.680892 | 8_1:-49356455 | None:intergenic |
| AATTAACAGTAAGAAATATG+GGG | 0.683837 | 8_1:+49352493 | Msa1198040:CDS |
| TATGCATGGAGTGTTCGGAG+TGG | 0.743225 | 8_1:+49353868 | Msa1198040:CDS |
| CGATACGAACAAGTGTACCA+CGG | 0.749390 | 8_1:-49353386 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAGAAAATAATAGAAAT+TGG | - | chr8_1:49350365-49350384 | None:intergenic | 10.0% |
| !!! | AGGGTTTTTTATTTTATAAT+TGG | + | chr8_1:49350424-49350443 | Msa1198040:intron | 15.0% |
| !!! | GGGTTTTTTATTTTATAATT+GGG | + | chr8_1:49350425-49350444 | Msa1198040:intron | 15.0% |
| !! | AGATTATGAATATTTCAATA+AGG | + | chr8_1:49350734-49350753 | Msa1198040:intron | 15.0% |
| !! | AAAGTATGAATATTTCAAAA+AGG | - | chr8_1:49351228-49351247 | None:intergenic | 15.0% |
| !! | AATGAATGTACATAAATTTA+CGG | - | chr8_1:49352629-49352648 | None:intergenic | 15.0% |
| !!! | ATACATCATATAACTTTTTT+AGG | + | chr8_1:49352987-49353006 | Msa1198040:intron | 15.0% |
| !!! | TACATCATATAACTTTTTTA+GGG | + | chr8_1:49352988-49353007 | Msa1198040:intron | 15.0% |
| !!! | ACTTTCTTTAAAAACTAAAT+AGG | + | chr8_1:49353018-49353037 | Msa1198040:intron | 15.0% |
| !!! | CTTTCTTTAAAAACTAAATA+GGG | + | chr8_1:49353019-49353038 | Msa1198040:intron | 15.0% |
| !! | ATAACATACTAATAGAATTT+GGG | - | chr8_1:49354325-49354344 | None:intergenic | 15.0% |
| !! | AATAACATACTAATAGAATT+TGG | - | chr8_1:49354326-49354345 | None:intergenic | 15.0% |
| !!! | TATGAAAAGTATTTTCTATT+AGG | - | chr8_1:49356202-49356221 | None:intergenic | 15.0% |
| !!! | AATACTTTTCATATTGATTA+TGG | + | chr8_1:49356209-49356228 | Msa1198040:intron | 15.0% |
| !! | TTATAATAGTATCTTAGTAA+TGG | + | chr8_1:49356751-49356770 | Msa1198040:three_prime_UTR | 15.0% |
| !!! | TTCATCAAATTCAACATTTT+AGG | + | chr8_1:49350404-49350423 | Msa1198040:intron | 20.0% |
| !!! | TCATCAAATTCAACATTTTA+GGG | + | chr8_1:49350405-49350424 | Msa1198040:intron | 20.0% |
| !! | TTGAAATATTCATAATCTCA+GGG | - | chr8_1:49350732-49350751 | None:intergenic | 20.0% |
| !! | ATTGAAATATTCATAATCTC+AGG | - | chr8_1:49350733-49350752 | None:intergenic | 20.0% |
| !! | TTAATAGCAAGTTGTTAAAA+TGG | + | chr8_1:49350848-49350867 | Msa1198040:intron | 20.0% |
| !! | TAATAGCAAGTTGTTAAAAT+GGG | + | chr8_1:49350849-49350868 | Msa1198040:intron | 20.0% |
| !!! | TTTGAAATATTCATACTTTC+AGG | + | chr8_1:49351229-49351248 | Msa1198040:intron | 20.0% |
| !! | TTGAAATATTCATACTTTCA+GGG | + | chr8_1:49351230-49351249 | Msa1198040:intron | 20.0% |
| !! | AGTTGCTAATTAGTAAAAAT+TGG | + | chr8_1:49351464-49351483 | Msa1198040:intron | 20.0% |
| !! | TTGATATCAAATGGTTTAAT+AGG | + | chr8_1:49351579-49351598 | Msa1198040:intron | 20.0% |
| !!! | TTTTTGTTCAAGTCAAATTA+AGG | + | chr8_1:49352035-49352054 | Msa1198040:intron | 20.0% |
| !! | ACAATTAACAGTAAGAAATA+TGG | + | chr8_1:49352491-49352510 | Msa1198040:CDS | 20.0% |
| !! | CAATTAACAGTAAGAAATAT+GGG | + | chr8_1:49352492-49352511 | Msa1198040:CDS | 20.0% |
| !! | AATTAACAGTAAGAAATATG+GGG | + | chr8_1:49352493-49352512 | Msa1198040:CDS | 20.0% |
| !!! | ATCTTGTTATATGACAAAAT+GGG | - | chr8_1:49352793-49352812 | None:intergenic | 20.0% |
| !!! | TATCTTGTTATATGACAAAA+TGG | - | chr8_1:49352794-49352813 | None:intergenic | 20.0% |
| !!! | TACATATTTGTTCTTTTTCT+AGG | + | chr8_1:49352812-49352831 | Msa1198040:intron | 20.0% |
| !!! | ACATATTTGTTCTTTTTCTA+GGG | + | chr8_1:49352813-49352832 | Msa1198040:intron | 20.0% |
| !! | TATGATGTATTAGATACAAA+AGG | - | chr8_1:49352977-49352996 | None:intergenic | 20.0% |
| !!! | ACATCATATAACTTTTTTAG+GGG | + | chr8_1:49352989-49353008 | Msa1198040:intron | 20.0% |
| !!! | TGTTTTATATTTGCTTTGAA+AGG | + | chr8_1:49353444-49353463 | Msa1198040:intron | 20.0% |
| !!! | TAATATCAAGTAAGAGTTTT+TGG | + | chr8_1:49353586-49353605 | Msa1198040:intron | 20.0% |
| !!! | ATAATGACTAAAAAAGTGTT+GGG | - | chr8_1:49353616-49353635 | None:intergenic | 20.0% |
| !!! | AAAATCTAAGACTATCATAA+AGG | - | chr8_1:49353979-49353998 | None:intergenic | 20.0% |
| !! | TAAGAATAATATGCTTAAGT+TGG | + | chr8_1:49354160-49354179 | Msa1198040:intron | 20.0% |
| !! | AAGAATAATATGCTTAAGTT+GGG | + | chr8_1:49354161-49354180 | Msa1198040:intron | 20.0% |
| !!! | ATTATTTTTTGTATGTTGAG+AGG | + | chr8_1:49354599-49354618 | Msa1198040:intron | 20.0% |
| !! | TGTCAATAAAAATATGATGT+GGG | - | chr8_1:49354640-49354659 | None:intergenic | 20.0% |
| !! | TTGTCAATAAAAATATGATG+TGG | - | chr8_1:49354641-49354660 | None:intergenic | 20.0% |
| !! | ATGTATAAATACCTATCAAT+TGG | - | chr8_1:49354919-49354938 | None:intergenic | 20.0% |
| !! | TTGATAGGTATTTATACATT+TGG | + | chr8_1:49354920-49354939 | Msa1198040:intron | 20.0% |
| !! | GTTAAAAAAAAAAGTAGTAC+AGG | - | chr8_1:49355007-49355026 | None:intergenic | 20.0% |
| !!! | GTTTAGTTTTCTGTTTTTTT+TGG | - | chr8_1:49355173-49355192 | None:intergenic | 20.0% |
| !!! | TATTTTTAATACTTCGATCA+AGG | - | chr8_1:49355417-49355436 | None:intergenic | 20.0% |
| !!! | AAAAGTATTTTCTATTAGGT+GGG | - | chr8_1:49356198-49356217 | None:intergenic | 20.0% |
| !! | TTGTGATTGAAAAACAAATT+AGG | + | chr8_1:49356276-49356295 | Msa1198040:intron | 20.0% |
| !! | GATAAGAATTAATATTGCAA+TGG | - | chr8_1:49356366-49356385 | None:intergenic | 20.0% |
| !! | ACAAAATATAATCTTTCAGT+TGG | - | chr8_1:49356589-49356608 | None:intergenic | 20.0% |
| !!! | TTCTTGTTATAGATGTTATT+TGG | + | chr8_1:49356728-49356747 | Msa1198040:three_prime_UTR | 20.0% |
| ! | AAAACGAAGTAGAAAAGAAA+CGG | - | chr8_1:49350218-49350237 | None:intergenic | 25.0% |
| ! | AAAAGAAGAGAAAGTTTCTT+TGG | + | chr8_1:49350279-49350298 | Msa1198040:CDS | 25.0% |
| !!! | TTTTTGATTTGTACACAGAA+TGG | + | chr8_1:49350455-49350474 | Msa1198040:intron | 25.0% |
| !!! | TTAGTTCAATGGATTTTCAT+AGG | + | chr8_1:49350483-49350502 | Msa1198040:CDS | 25.0% |
| !!! | TAGTTCAATGGATTTTCATA+GGG | + | chr8_1:49350484-49350503 | Msa1198040:CDS | 25.0% |
| ! | AATAGCAAGTTGTTAAAATG+GGG | + | chr8_1:49350850-49350869 | Msa1198040:intron | 25.0% |
| ! | AATTCCCCTTGTTAAAATAT+AGG | + | chr8_1:49351139-49351158 | Msa1198040:intron | 25.0% |
| ! | ATTCCCCTTGTTAAAATATA+GGG | + | chr8_1:49351140-49351159 | Msa1198040:intron | 25.0% |
| ! | TTAAAATATAGGGAGCTAAT+TGG | + | chr8_1:49351150-49351169 | Msa1198040:intron | 25.0% |
| ! | ATTGGTAAGTGGTTAAATAT+AGG | + | chr8_1:49351168-49351187 | Msa1198040:intron | 25.0% |
| ! | ATATTATTAAACTGTCGAGT+TGG | - | chr8_1:49351196-49351215 | None:intergenic | 25.0% |
| !! | AAAGATGCATTGATATCAAA+TGG | + | chr8_1:49351570-49351589 | Msa1198040:intron | 25.0% |
| ! | ATGCAAAACTAGAAAAATAG+AGG | + | chr8_1:49351613-49351632 | Msa1198040:intron | 25.0% |
| ! | AAACCCAAAACTATTTACAA+TGG | + | chr8_1:49351641-49351660 | Msa1198040:intron | 25.0% |
| !! | AAAATTTGGAGTTGAGATAA+TGG | + | chr8_1:49351939-49351958 | Msa1198040:intron | 25.0% |
| !! | AAATTTGGAGTTGAGATAAT+GGG | + | chr8_1:49351940-49351959 | Msa1198040:intron | 25.0% |
| ! | AAGCTGCAAAATTCTAATTT+AGG | + | chr8_1:49352151-49352170 | Msa1198040:intron | 25.0% |
| ! | AGCTGCAAAATTCTAATTTA+GGG | + | chr8_1:49352152-49352171 | Msa1198040:intron | 25.0% |
| !!! | AAATTTTAAGAATCCCAATC+TGG | - | chr8_1:49352240-49352259 | None:intergenic | 25.0% |
| ! | TTAAAATTTATGAGATGACC+TGG | + | chr8_1:49352251-49352270 | Msa1198040:intron | 25.0% |
| ! | TATTTACGAATATAGTATCC+AGG | - | chr8_1:49352272-49352291 | None:intergenic | 25.0% |
| ! | AAGTACTTGAGATATTTCAA+AGG | + | chr8_1:49352704-49352723 | Msa1198040:CDS | 25.0% |
| ! | CTATATCATATGATGATCAA+GGG | + | chr8_1:49353068-49353087 | Msa1198040:CDS | 25.0% |
| ! | TTGTGAAGTTTAGTAATGAT+GGG | + | chr8_1:49353310-49353329 | Msa1198040:CDS | 25.0% |
| ! | ATATTACAAACATTCCATCA+GGG | - | chr8_1:49353572-49353591 | None:intergenic | 25.0% |
| !! | CATAATGACTAAAAAAGTGT+TGG | - | chr8_1:49353617-49353636 | None:intergenic | 25.0% |
| !!! | CAACACTTTTTTAGTCATTA+TGG | + | chr8_1:49353615-49353634 | Msa1198040:intron | 25.0% |
| ! | TTCTTCCAAAACATAGTTTA+AGG | - | chr8_1:49353734-49353753 | None:intergenic | 25.0% |
| !! | ATTTTAAGCCTAAATTTTGC+AGG | + | chr8_1:49353826-49353845 | Msa1198040:intron | 25.0% |
| ! | ATCTATAACTATAAGCAATG+TGG | + | chr8_1:49354001-49354020 | Msa1198040:intron | 25.0% |
| ! | TCTATAACTATAAGCAATGT+GGG | + | chr8_1:49354002-49354021 | Msa1198040:intron | 25.0% |
| ! | CTTAAGCATATTATTCTTAG+TGG | - | chr8_1:49354159-49354178 | None:intergenic | 25.0% |
| ! | AGATTGAACATATCCTTTAT+GGG | - | chr8_1:49354397-49354416 | None:intergenic | 25.0% |
| ! | AAGATTGAACATATCCTTTA+TGG | - | chr8_1:49354398-49354417 | None:intergenic | 25.0% |
| ! | GTCAATAAAAATATGATGTG+GGG | - | chr8_1:49354639-49354658 | None:intergenic | 25.0% |
| ! | TTGACAAATGTATAAGAACA+TGG | + | chr8_1:49354654-49354673 | Msa1198040:intron | 25.0% |
| ! | TGACAAATGTATAAGAACAT+GGG | + | chr8_1:49354655-49354674 | Msa1198040:intron | 25.0% |
| ! | ATGTTTGGTTGAATATTTAG+TGG | - | chr8_1:49354723-49354742 | None:intergenic | 25.0% |
| !! | CATTTTTATGATTGATCCAT+TGG | - | chr8_1:49355879-49355898 | None:intergenic | 25.0% |
| ! | TAGATGGGGAATAATAAAAA+GGG | - | chr8_1:49356116-49356135 | None:intergenic | 25.0% |
| ! | ATTATAAAGAAAGTCTCTCA+TGG | - | chr8_1:49356164-49356183 | None:intergenic | 25.0% |
| ! | ATGAGAGACTTTCTTTATAA+TGG | + | chr8_1:49356163-49356182 | Msa1198040:intron | 25.0% |
| ! | TGAGAGACTTTCTTTATAAT+GGG | + | chr8_1:49356164-49356183 | Msa1198040:intron | 25.0% |
| !!! | AAAGTATTTTCTATTAGGTG+GGG | - | chr8_1:49356197-49356216 | None:intergenic | 25.0% |
| !!! | GAAAAGTATTTTCTATTAGG+TGG | - | chr8_1:49356199-49356218 | None:intergenic | 25.0% |
| ! | ATTGAAAAACAAATTAGGCT+GGG | + | chr8_1:49356281-49356300 | Msa1198040:intron | 25.0% |
| ! | AATTCTTATCTATCCTTTGT+AGG | + | chr8_1:49356376-49356395 | Msa1198040:intron | 25.0% |
| ! | AACATATATCTCAACTTGTA+CGG | - | chr8_1:49356685-49356704 | None:intergenic | 25.0% |
| !! | AAATGTTGATGGAGATTTTG+TGG | - | chr8_1:49350119-49350138 | None:intergenic | 30.0% |
| AGAAATTCATCTCCAACAAT+GGG | + | chr8_1:49350151-49350170 | Msa1198040:exon | 30.0% | |
| TGAAGAAATTCTTCTCAGTA+TGG | + | chr8_1:49350309-49350328 | Msa1198040:CDS | 30.0% | |
| ATTGGTTACGTAATCTTTGA+AGG | - | chr8_1:49350347-49350366 | None:intergenic | 30.0% | |
| GAATGGTAGAATTAGTTCAA+TGG | + | chr8_1:49350472-49350491 | Msa1198040:intron | 30.0% | |
| TTTGTAGGATACTCTCAATT+AGG | + | chr8_1:49350705-49350724 | Msa1198040:intron | 30.0% | |
| !! | TTAACAACTTGCTATTAAGC+TGG | - | chr8_1:49350846-49350865 | None:intergenic | 30.0% |
| TTGCAATTTATCTGCATTCA+GGG | - | chr8_1:49350923-49350942 | None:intergenic | 30.0% | |
| TTTGCAATTTATCTGCATTC+AGG | - | chr8_1:49350924-49350943 | None:intergenic | 30.0% | |
| ACTAACAAAGTCTACATTCA+GGG | - | chr8_1:49350952-49350971 | None:intergenic | 30.0% | |
| ACTAACGAAGTTTGCATTAA+GGG | - | chr8_1:49350984-49351003 | None:intergenic | 30.0% | |
| TTTGCAATTTCTCTTCATTC+AGG | + | chr8_1:49351072-49351091 | Msa1198040:intron | 30.0% | |
| TTGCAATTTCTCTTCATTCA+GGG | + | chr8_1:49351073-49351092 | Msa1198040:intron | 30.0% | |
| !!! | AGCTCCCTATATTTTAACAA+GGG | - | chr8_1:49351147-49351166 | None:intergenic | 30.0% |
| !!! | TAGCTCCCTATATTTTAACA+AGG | - | chr8_1:49351148-49351167 | None:intergenic | 30.0% |
| !!! | TCGTTACTTTTATTTCAGCA+AGG | + | chr8_1:49351333-49351352 | Msa1198040:intron | 30.0% |
| ! | TTCTTCTGAAAACGATTGTT+TGG | - | chr8_1:49351536-49351555 | None:intergenic | 30.0% |
| TTTCAGAAGAAGTGGAAAAA+AGG | + | chr8_1:49351545-49351564 | Msa1198040:intron | 30.0% | |
| TTCAGAAGAAGTGGAAAAAA+GGG | + | chr8_1:49351546-49351565 | Msa1198040:intron | 30.0% | |
| ! | CCTCCATTGTAAATAGTTTT+GGG | - | chr8_1:49351647-49351666 | None:intergenic | 30.0% |
| ! | ACCTCCATTGTAAATAGTTT+TGG | - | chr8_1:49351648-49351667 | None:intergenic | 30.0% |
| !!! | TTTCTCGTCCTTTTTTTCAA+TGG | + | chr8_1:49351783-49351802 | Msa1198040:intron | 30.0% |
| !!! | TTCTCGTCCTTTTTTTCAAT+GGG | + | chr8_1:49351784-49351803 | Msa1198040:intron | 30.0% |
| !! | AGTGGATTGGAAGAAAAATT+TGG | + | chr8_1:49351925-49351944 | Msa1198040:intron | 30.0% |
| TAAAACTGACCTAGCAAAAA+TGG | + | chr8_1:49352110-49352129 | Msa1198040:intron | 30.0% | |
| AAAACTGACCTAGCAAAAAT+GGG | + | chr8_1:49352111-49352130 | Msa1198040:intron | 30.0% | |
| TCAAAGATCTGGTAACAATT+AGG | - | chr8_1:49352469-49352488 | None:intergenic | 30.0% | |
| GTTAATTGTCTTCAAAGATC+TGG | - | chr8_1:49352480-49352499 | None:intergenic | 30.0% | |
| ! | TAAGAAATATGGGGTTGATT+TGG | + | chr8_1:49352502-49352521 | Msa1198040:CDS | 30.0% |
| ! | GTCATTTACTCTTCTAAGAA+TGG | + | chr8_1:49352551-49352570 | Msa1198040:CDS | 30.0% |
| ! | TTTACTCTTCTAAGAATGGT+TGG | + | chr8_1:49352555-49352574 | Msa1198040:CDS | 30.0% |
| ! | TTACTCTTCTAAGAATGGTT+GGG | + | chr8_1:49352556-49352575 | Msa1198040:CDS | 30.0% |
| AGATCAATGAAGATGGAAAT+AGG | - | chr8_1:49352599-49352618 | None:intergenic | 30.0% | |
| ATTACAGAGATCAATGAAGA+TGG | - | chr8_1:49352606-49352625 | None:intergenic | 30.0% | |
| CAATTAATCCAGAATCTTTG+CGG | + | chr8_1:49352660-49352679 | Msa1198040:intron | 30.0% | |
| ! | CACTACATACAATTTGAGAT+TGG | - | chr8_1:49352758-49352777 | None:intergenic | 30.0% |
| ATATAAAGCAATCTTTCCGA+GGG | - | chr8_1:49352858-49352877 | None:intergenic | 30.0% | |
| TGATCATCATATGATATAGC+AGG | - | chr8_1:49353067-49353086 | None:intergenic | 30.0% | |
| GCTATATCATATGATGATCA+AGG | + | chr8_1:49353067-49353086 | Msa1198040:CDS | 30.0% | |
| ACATAAGAATGTTTGATGCA+AGG | + | chr8_1:49353119-49353138 | Msa1198040:CDS | 30.0% | |
| GTTGTGAAGTTTAGTAATGA+TGG | + | chr8_1:49353309-49353328 | Msa1198040:CDS | 30.0% | |
| GATATTACAAACATTCCATC+AGG | - | chr8_1:49353573-49353592 | None:intergenic | 30.0% | |
| AAGGTTTACGCAAAAAATTG+TGG | - | chr8_1:49353664-49353683 | None:intergenic | 30.0% | |
| TAAACCTTGTATTCTGTACA+TGG | + | chr8_1:49353676-49353695 | Msa1198040:intron | 30.0% | |
| ! | AGTTTAAGGTATGGAATACA+GGG | - | chr8_1:49353720-49353739 | None:intergenic | 30.0% |
| ! | TAGTTTAAGGTATGGAATAC+AGG | - | chr8_1:49353721-49353740 | None:intergenic | 30.0% |
| ! | CCAAAACATAGTTTAAGGTA+TGG | - | chr8_1:49353729-49353748 | None:intergenic | 30.0% |
| ! | CCATACCTTAAACTATGTTT+TGG | + | chr8_1:49353726-49353745 | Msa1198040:intron | 30.0% |
| ATCAATGTATGTAATCCTGT+TGG | + | chr8_1:49353767-49353786 | Msa1198040:intron | 30.0% | |
| AAAAGAACAGTTGTGAAATG+CGG | - | chr8_1:49353929-49353948 | None:intergenic | 30.0% | |
| TTAAACACCTTCATTGTGTT+GGG | - | chr8_1:49354048-49354067 | None:intergenic | 30.0% | |
| CAAAACTCATCTAACTTAGT+AGG | - | chr8_1:49354241-49354260 | None:intergenic | 30.0% | |
| ! | CTACTAAGTTAGATGAGTTT+TGG | + | chr8_1:49354239-49354258 | Msa1198040:intron | 30.0% |
| !!! | GAAAAATGTTTTTAAGTGCG+AGG | + | chr8_1:49354265-49354284 | Msa1198040:intron | 30.0% |
| CTTGTAGTTATATCCCATAA+AGG | + | chr8_1:49354381-49354400 | Msa1198040:intron | 30.0% | |
| AGAAAAACAATGATCACTAG+TGG | - | chr8_1:49354470-49354489 | None:intergenic | 30.0% | |
| !! | TTCTTTGTTGTTTGATTACC+TGG | + | chr8_1:49354522-49354541 | Msa1198040:intron | 30.0% |
| !!! | TATTTTTTCTGCTATTCTCC+AGG | - | chr8_1:49354543-49354562 | None:intergenic | 30.0% |
| GACAAATGTATAAGAACATG+GGG | + | chr8_1:49354656-49354675 | Msa1198040:intron | 30.0% | |
| ! | TCTTGATAGCTAGCATTTAA+AGG | - | chr8_1:49354687-49354706 | None:intergenic | 30.0% |
| TTTAAATGCTAGCTATCAAG+AGG | + | chr8_1:49354686-49354705 | Msa1198040:intron | 30.0% | |
| ATCAAGTAGTATGAGATGTT+TGG | - | chr8_1:49354738-49354757 | None:intergenic | 30.0% | |
| GATAGGGACTTGAATATTAT+GGG | - | chr8_1:49354776-49354795 | None:intergenic | 30.0% | |
| TGATAGGGACTTGAATATTA+TGG | - | chr8_1:49354777-49354796 | None:intergenic | 30.0% | |
| ! | ACAAGATAAAAGTCTTTTCG+TGG | - | chr8_1:49355376-49355395 | None:intergenic | 30.0% |
| ! | TTTTAATACTTCGATCAAGG+AGG | - | chr8_1:49355414-49355433 | None:intergenic | 30.0% |
| !! | GTTAATTGTGTGTTTTGAGT+TGG | - | chr8_1:49355586-49355605 | None:intergenic | 30.0% |
| AATCGGAAAAAGTTGTGTAT+AGG | - | chr8_1:49355729-49355748 | None:intergenic | 30.0% | |
| ! | TTTTAGCCCTTTTACTTTCT+GGG | - | chr8_1:49355856-49355875 | None:intergenic | 30.0% |
| GTAGATGGGGAATAATAAAA+AGG | - | chr8_1:49356117-49356136 | None:intergenic | 30.0% | |
| !! | GTTTTTCAATCACAAGTTTC+TGG | - | chr8_1:49356271-49356290 | None:intergenic | 30.0% |
| GATTGAAAAACAAATTAGGC+TGG | + | chr8_1:49356280-49356299 | Msa1198040:intron | 30.0% | |
| TTGAAAAACAAATTAGGCTG+GGG | + | chr8_1:49356282-49356301 | Msa1198040:intron | 30.0% | |
| ! | GTTCCAGATTTGTCTAAAAT+AGG | + | chr8_1:49356503-49356522 | Msa1198040:CDS | 30.0% |
| !! | TCTAAAATAGGAGCTTTTGT+CGG | + | chr8_1:49356515-49356534 | Msa1198040:CDS | 30.0% |
| ! | AGAAGCATATTTACAAACCA+TGG | - | chr8_1:49356633-49356652 | None:intergenic | 30.0% |
| AAAATTATGCGTCATGTTCA+CGG | + | chr8_1:49356831-49356850 | Msa1198040:three_prime_UTR | 30.0% | |
| ! | GTTGGTGTTTGAAATGTTGA+TGG | - | chr8_1:49350130-49350149 | None:intergenic | 35.0% |
| GAGAAATTCATCTCCAACAA+TGG | + | chr8_1:49350150-49350169 | Msa1198040:exon | 35.0% | |
| GTAGAAAAGAAACGGAACAA+GGG | - | chr8_1:49350210-49350229 | None:intergenic | 35.0% | |
| AGTAGAAAAGAAACGGAACA+AGG | - | chr8_1:49350211-49350230 | None:intergenic | 35.0% | |
| ! | ATTTTCGCGTTTTTCTTCTC+AGG | + | chr8_1:49350244-49350263 | Msa1198040:intron | 35.0% |
| !! | ACTTTCTCTTCTTTTTCACC+TGG | - | chr8_1:49350274-49350293 | None:intergenic | 35.0% |
| ATTCTTCTCAGTATGGAAGT+TGG | + | chr8_1:49350316-49350335 | Msa1198040:CDS | 35.0% | |
| AGCAACATCGTATAATCGAA+TGG | - | chr8_1:49350546-49350565 | None:intergenic | 35.0% | |
| TACAAAGTCGGGGAAAAATT+TGG | - | chr8_1:49350691-49350710 | None:intergenic | 35.0% | |
| ! | AAATTTTTCCCCGACTTTGT+AGG | + | chr8_1:49350690-49350709 | Msa1198040:intron | 35.0% |
| !! | TTGAGAGTATCCTACAAAGT+CGG | - | chr8_1:49350703-49350722 | None:intergenic | 35.0% |
| ! | TAGTACTTCTGAGAGATGTT+AGG | + | chr8_1:49350786-49350805 | Msa1198040:intron | 35.0% |
| GACTAACAAAGTCTACATTC+AGG | - | chr8_1:49350953-49350972 | None:intergenic | 35.0% | |
| GACTAACGAAGTTTGCATTA+AGG | - | chr8_1:49350985-49351004 | None:intergenic | 35.0% | |
| !!! | GCTCCCTATATTTTAACAAG+GGG | - | chr8_1:49351146-49351165 | None:intergenic | 35.0% |
| AGCGATAAAATTGCACTTAG+AGG | - | chr8_1:49351368-49351387 | None:intergenic | 35.0% | |
| ! | ACAATCGTTTTCAGAAGAAG+TGG | + | chr8_1:49351537-49351556 | Msa1198040:intron | 35.0% |
| CCCAAAACTATTTACAATGG+AGG | + | chr8_1:49351644-49351663 | Msa1198040:intron | 35.0% | |
| AACTATTTACAATGGAGGTG+AGG | + | chr8_1:49351649-49351668 | Msa1198040:intron | 35.0% | |
| AAGCCAAAAATGACAGAAGA+CGG | + | chr8_1:49351739-49351758 | Msa1198040:intron | 35.0% | |
| GAAAAAAAGGACGAGAAAGT+GGG | - | chr8_1:49351781-49351800 | None:intergenic | 35.0% | |
| TGAAAAAAAGGACGAGAAAG+TGG | - | chr8_1:49351782-49351801 | None:intergenic | 35.0% | |
| AGCAGAACCCATTGAAAAAA+AGG | - | chr8_1:49351794-49351813 | None:intergenic | 35.0% | |
| !! | TTTTTCAATGGGTTCTGCTT+TGG | + | chr8_1:49351795-49351814 | Msa1198040:intron | 35.0% |
| GAAACATTGTCTTCTCAAAG+AGG | + | chr8_1:49351971-49351990 | Msa1198040:intron | 35.0% | |
| ATTGTCTTCTCAAAGAGGAA+AGG | + | chr8_1:49351976-49351995 | Msa1198040:intron | 35.0% | |
| TTGTCTTCTCAAAGAGGAAA+GGG | + | chr8_1:49351977-49351996 | Msa1198040:intron | 35.0% | |
| ! | TTGCAGCTTTACCCAATTTT+GGG | - | chr8_1:49352140-49352159 | None:intergenic | 35.0% |
| ! | TTTGCAGCTTTACCCAATTT+TGG | - | chr8_1:49352141-49352160 | None:intergenic | 35.0% |
| ATGGATTCTTGTACCAGATT+GGG | + | chr8_1:49352224-49352243 | Msa1198040:intron | 35.0% | |
| AAAAAATGCCTAGACTCGTA+TGG | - | chr8_1:49352395-49352414 | None:intergenic | 35.0% | |
| GAAGAGTAAATGACAGTTGT+AGG | - | chr8_1:49352545-49352564 | None:intergenic | 35.0% | |
| ATTTCAAAGGTCATCATGAC+AGG | + | chr8_1:49352717-49352736 | Msa1198040:CDS | 35.0% | |
| GATATAAAGCAATCTTTCCG+AGG | - | chr8_1:49352859-49352878 | None:intergenic | 35.0% | |
| CGGAAAGATTGCTTTATATC+TGG | + | chr8_1:49352859-49352878 | Msa1198040:CDS | 35.0% | |
| TAGATCGAACTGTCTTACTA+TGG | + | chr8_1:49352887-49352906 | Msa1198040:CDS | 35.0% | |
| AGATCGAACTGTCTTACTAT+GGG | + | chr8_1:49352888-49352907 | Msa1198040:CDS | 35.0% | |
| TGTCTTACTATGGGATCAAA+GGG | + | chr8_1:49352897-49352916 | Msa1198040:CDS | 35.0% | |
| AGTGTTCAAATTCTACTACC+TGG | - | chr8_1:49352933-49352952 | None:intergenic | 35.0% | |
| CATTCTTATGTATCCTCCAA+AGG | - | chr8_1:49353110-49353129 | None:intergenic | 35.0% | |
| TGATGCAAGGATGTATGAAA+AGG | + | chr8_1:49353132-49353151 | Msa1198040:CDS | 35.0% | |
| TATTGTGCAATTCACTCTAC+AGG | + | chr8_1:49353239-49353258 | Msa1198040:intron | 35.0% | |
| ATTGTGCAATTCACTCTACA+GGG | + | chr8_1:49353240-49353259 | Msa1198040:intron | 35.0% | |
| CCAACAGAAAATAGCTCAAA+GGG | - | chr8_1:49353267-49353286 | None:intergenic | 35.0% | |
| !! | CCTTTGAGCTATTTTCTGTT+GGG | + | chr8_1:49353265-49353284 | Msa1198040:CDS | 35.0% |
| !! | CTTTGAGCTATTTTCTGTTG+GGG | + | chr8_1:49353266-49353285 | Msa1198040:CDS | 35.0% |
| !! | TTTGAGCTATTTTCTGTTGG+GGG | + | chr8_1:49353267-49353286 | Msa1198040:CDS | 35.0% |
| ATGCTTGTAACAACTACAGA+TGG | + | chr8_1:49353339-49353358 | Msa1198040:CDS | 35.0% | |
| TATTTGAGCTGAGGAAAGTA+GGG | - | chr8_1:49353413-49353432 | None:intergenic | 35.0% | |
| !! | TGAAAGAAGTATTTGAGCTG+AGG | - | chr8_1:49353422-49353441 | None:intergenic | 35.0% |
| CATTCCATGTACAGAATACA+AGG | - | chr8_1:49353683-49353702 | None:intergenic | 35.0% | |
| TGTATTCTGTACATGGAATG+TGG | + | chr8_1:49353683-49353702 | Msa1198040:intron | 35.0% | |
| ! | GTTTAAGGTATGGAATACAG+GGG | - | chr8_1:49353719-49353738 | None:intergenic | 35.0% |
| AAAGAACAGTTGTGAAATGC+GGG | - | chr8_1:49353928-49353947 | None:intergenic | 35.0% | |
| CTTAAACACCTTCATTGTGT+TGG | - | chr8_1:49354049-49354068 | None:intergenic | 35.0% | |
| !! | CAACACAATGAAGGTGTTTA+AGG | + | chr8_1:49354047-49354066 | Msa1198040:intron | 35.0% |
| AGTGGAGAATTACTATCTGT+TGG | - | chr8_1:49354141-49354160 | None:intergenic | 35.0% | |
| AACTTAACCTCTTAAGGTGA+GGG | - | chr8_1:49354294-49354313 | None:intergenic | 35.0% | |
| TAACTTAACCTCTTAAGGTG+AGG | - | chr8_1:49354295-49354314 | None:intergenic | 35.0% | |
| GTGTCTAACTTAACCTCTTA+AGG | - | chr8_1:49354300-49354319 | None:intergenic | 35.0% | |
| ATGTTGAGAGGTTTGAAGAT+TGG | + | chr8_1:49354611-49354630 | Msa1198040:intron | 35.0% | |
| TGATAGCTAGCATTTAAAGG+AGG | - | chr8_1:49354684-49354703 | None:intergenic | 35.0% | |
| CATCTCATACTACTTGATGT+AGG | + | chr8_1:49354740-49354759 | Msa1198040:intron | 35.0% | |
| ATAAAGGGATACCTAAGAAG+AGG | - | chr8_1:49354871-49354890 | None:intergenic | 35.0% | |
| TATCAATTGGTATCAGAACC+TGG | - | chr8_1:49354906-49354925 | None:intergenic | 35.0% | |
| ! | AGGTTCTGATACCAATTGAT+AGG | + | chr8_1:49354905-49354924 | Msa1198040:intron | 35.0% |
| AAAAAGTAGTACAGGATGCT+CGG | - | chr8_1:49354999-49355018 | None:intergenic | 35.0% | |
| TGTTGTTGTGCTTGTATCTT+GGG | - | chr8_1:49355100-49355119 | None:intergenic | 35.0% | |
| ! | TTGTTGTTGTGCTTGTATCT+TGG | - | chr8_1:49355101-49355120 | None:intergenic | 35.0% |
| !! | CTAGGCTTTGTTGTTTGTTT+CGG | - | chr8_1:49355200-49355219 | None:intergenic | 35.0% |
| TATTGAGGTAGCATAGCTTA+GGG | - | chr8_1:49355280-49355299 | None:intergenic | 35.0% | |
| TTATTGAGGTAGCATAGCTT+AGG | - | chr8_1:49355281-49355300 | None:intergenic | 35.0% | |
| TACCTCAATAAACAATCCCT+AGG | + | chr8_1:49355290-49355309 | Msa1198040:intron | 35.0% | |
| ATCCTAGGGATTGTTTATTG+AGG | - | chr8_1:49355295-49355314 | None:intergenic | 35.0% | |
| ! | TAAAAGTCTTTTCGTGGCAT+TGG | - | chr8_1:49355370-49355389 | None:intergenic | 35.0% |
| !! | GACGGGGTTTTTGATTAATT+TGG | - | chr8_1:49355481-49355500 | None:intergenic | 35.0% |
| CTTTCAATGTTGGACTAATG+AGG | - | chr8_1:49355522-49355541 | None:intergenic | 35.0% | |
| AAGTTGTGTATAGGTACCTA+TGG | - | chr8_1:49355720-49355739 | None:intergenic | 35.0% | |
| ! | AACAGAAATTATAGGGGCAT+TGG | - | chr8_1:49355797-49355816 | None:intergenic | 35.0% |
| GGAGTGAACAGAAATTATAG+GGG | - | chr8_1:49355803-49355822 | None:intergenic | 35.0% | |
| GGGAGTGAACAGAAATTATA+GGG | - | chr8_1:49355804-49355823 | None:intergenic | 35.0% | |
| AGGGAGTGAACAGAAATTAT+AGG | - | chr8_1:49355805-49355824 | None:intergenic | 35.0% | |
| !! | GTTTTAGCCCTTTTACTTTC+TGG | - | chr8_1:49355857-49355876 | None:intergenic | 35.0% |
| AGTAAAAGGGCTAAAACCAA+TGG | + | chr8_1:49355860-49355879 | Msa1198040:intron | 35.0% | |
| ! | AGACATCCATATAGTGGAAA+AGG | - | chr8_1:49356070-49356089 | None:intergenic | 35.0% |
| GGAATAATAAAAAGGGAAGG+TGG | - | chr8_1:49356109-49356128 | None:intergenic | 35.0% | |
| TGGGGAATAATAAAAAGGGA+AGG | - | chr8_1:49356112-49356131 | None:intergenic | 35.0% | |
| AAAGAAAGTCTCTCATGGAA+CGG | - | chr8_1:49356159-49356178 | None:intergenic | 35.0% | |
| GTTGGCATCATTAACTTCTT+TGG | + | chr8_1:49356308-49356327 | Msa1198040:intron | 35.0% | |
| ! | AGAAGTGCAACTTCTGATAT+TGG | + | chr8_1:49356410-49356429 | Msa1198040:CDS | 35.0% |
| !! | GCTCCTATTTTAGACAAATC+TGG | - | chr8_1:49356509-49356528 | None:intergenic | 35.0% |
| TGTAAATATGCTTCTCCAGT+AGG | + | chr8_1:49356638-49356657 | Msa1198040:three_prime_UTR | 35.0% | |
| GTTGGAGATGAATTTCTCGT+TGG | - | chr8_1:49350148-49350167 | None:intergenic | 40.0% | |
| AATTCATCTCCAACAATGGG+TGG | + | chr8_1:49350154-49350173 | Msa1198040:exon | 40.0% | |
| TATGATGTACCACCCATTGT+TGG | - | chr8_1:49350166-49350185 | None:intergenic | 40.0% | |
| ! | ACGGAACAAGGGTGTAAAAT+CGG | - | chr8_1:49350199-49350218 | None:intergenic | 40.0% |
| ! | TTTTTCTTCTCAGGAACACC+AGG | + | chr8_1:49350253-49350272 | Msa1198040:intron | 40.0% |
| AAAGTCGGGGAAAAATTTGG+TGG | - | chr8_1:49350688-49350707 | None:intergenic | 40.0% | |
| !! | TGAGAGTATCCTACAAAGTC+GGG | - | chr8_1:49350702-49350721 | None:intergenic | 40.0% |
| ! | AGTCACTTTAGTCCCTGAAT+CGG | + | chr8_1:49350877-49350896 | Msa1198040:intron | 40.0% |
| ACTAACGGAGTCTACATTCA+GGG | - | chr8_1:49351016-49351035 | None:intergenic | 40.0% | |
| TCAGGGACTAAAGTGACTAA+CGG | - | chr8_1:49351121-49351140 | None:intergenic | 40.0% | |
| ! | AGTCACTTTAGTCCCTGAAT+GGG | - | chr8_1:49350877-49350896 | None:intergenic | 40.0% |
| ! | TAGTCACTTTAGTCCCTGAA+TGG | - | chr8_1:49350876-49350895 | None:intergenic | 40.0% |
| ATAGGGAGCTAATTGGTAAG+TGG | + | chr8_1:49351157-49351176 | Msa1198040:intron | 40.0% | |
| AATTCGTCCCTGACTTTGTA+GGG | - | chr8_1:49351271-49351290 | None:intergenic | 40.0% | |
| AAATTCGTCCCTGACTTTGT+AGG | - | chr8_1:49351272-49351291 | None:intergenic | 40.0% | |
| TACAAAGTCAGGGACGAATT+TGG | + | chr8_1:49351271-49351290 | Msa1198040:intron | 40.0% | |
| CGATTGTTTGGTTGCTATCA+AGG | - | chr8_1:49351524-49351543 | None:intergenic | 40.0% | |
| ! | GCACGTTTTATGAAGGATGT+TGG | + | chr8_1:49351671-49351690 | Msa1198040:intron | 40.0% |
| TTTATGAAGGATGTTGGAGC+AGG | + | chr8_1:49351677-49351696 | Msa1198040:intron | 40.0% | |
| AAAAATGGGCCTCCCAAAAT+TGG | + | chr8_1:49352125-49352144 | Msa1198040:intron | 40.0% | |
| AAAATGGGCCTCCCAAAATT+GGG | + | chr8_1:49352126-49352145 | Msa1198040:intron | 40.0% | |
| TATACCATGAGTAGATGCGA+TGG | + | chr8_1:49352205-49352224 | Msa1198040:intron | 40.0% | |
| ! | GATGGATTCTTGTACCAGAT+TGG | + | chr8_1:49352223-49352242 | Msa1198040:intron | 40.0% |
| ! | TCTTCTAAGAATGGTTGGGA+TGG | + | chr8_1:49352560-49352579 | Msa1198040:CDS | 40.0% |
| CTGTCTTACTATGGGATCAA+AGG | + | chr8_1:49352896-49352915 | Msa1198040:CDS | 40.0% | |
| TAGGGACTGCTACATGTAAA+AGG | + | chr8_1:49353037-49353056 | Msa1198040:intron | 40.0% | |
| GACTGCTACATGTAAAAGGA+AGG | + | chr8_1:49353041-49353060 | Msa1198040:CDS | 40.0% | |
| CTTGTCTTTGCAATAGCCTT+TGG | + | chr8_1:49353091-49353110 | Msa1198040:CDS | 40.0% | |
| !! | CCCTTTGAGCTATTTTCTGT+TGG | + | chr8_1:49353264-49353283 | Msa1198040:CDS | 40.0% |
| CCCAACAGAAAATAGCTCAA+AGG | - | chr8_1:49353268-49353287 | None:intergenic | 40.0% | |
| GTATTTGAGCTGAGGAAAGT+AGG | - | chr8_1:49353414-49353433 | None:intergenic | 40.0% | |
| GCTGAAAGAAGCTTCTAATG+TGG | - | chr8_1:49353550-49353569 | None:intergenic | 40.0% | |
| AGAAACAAACAGAAGCCAAC+AGG | - | chr8_1:49353785-49353804 | None:intergenic | 40.0% | |
| ! | GCTTCTGTTTGTTTCTTGCT+AGG | + | chr8_1:49353789-49353808 | Msa1198040:intron | 40.0% |
| ! | AGCCTAAATTTTGCAGGTTC+TGG | + | chr8_1:49353832-49353851 | Msa1198040:intron | 40.0% |
| ! | GCCTAAATTTTGCAGGTTCT+GGG | + | chr8_1:49353833-49353852 | Msa1198040:intron | 40.0% |
| ! | CCTAAATTTTGCAGGTTCTG+GGG | + | chr8_1:49353834-49353853 | Msa1198040:intron | 40.0% |
| GAAAGCTGGACATGTAAAAG+TGG | - | chr8_1:49354187-49354206 | None:intergenic | 40.0% | |
| AACTTAGTAGGCTGCAATGA+AGG | - | chr8_1:49354229-49354248 | None:intergenic | 40.0% | |
| TTCAATCTTGTGTGCCATCA+TGG | + | chr8_1:49354409-49354428 | Msa1198040:intron | 40.0% | |
| ATTCTGGCGTCACATTTGAT+GGG | + | chr8_1:49354437-49354456 | Msa1198040:intron | 40.0% | |
| TTTGGAAAATCCTCCCTTGA+AGG | + | chr8_1:49354938-49354957 | Msa1198040:intron | 40.0% | |
| ! | TGCTCGGTGGAGTATTTAAA+TGG | - | chr8_1:49354983-49355002 | None:intergenic | 40.0% |
| TTGTTGTGCTTGTATCTTGG+GGG | - | chr8_1:49355098-49355117 | None:intergenic | 40.0% | |
| GTTGTTGTGCTTGTATCTTG+GGG | - | chr8_1:49355099-49355118 | None:intergenic | 40.0% | |
| !!! | TTTGGTGGTTTTGTTGTTGC+TGG | - | chr8_1:49355249-49355268 | None:intergenic | 40.0% |
| GTTTGTATTACGAGTGGTGT+TGG | - | chr8_1:49355319-49355338 | None:intergenic | 40.0% | |
| TGTTCGTGCACTTTCAATGT+TGG | - | chr8_1:49355532-49355551 | None:intergenic | 40.0% | |
| ! | TGAAAGTGCACGAACAGATT+CGG | + | chr8_1:49355536-49355555 | Msa1198040:intron | 40.0% |
| ! | GAGTTGGCTTCAAGTCAATT+TGG | - | chr8_1:49355570-49355589 | None:intergenic | 40.0% |
| ACTTCGTCGTCTACTTGATT+TGG | + | chr8_1:49355752-49355771 | Msa1198040:intron | 40.0% | |
| CTTCGTCGTCTACTTGATTT+GGG | + | chr8_1:49355753-49355772 | Msa1198040:intron | 40.0% | |
| !! | TTATAGGGGCATTGGTGTTA+TGG | - | chr8_1:49355789-49355808 | None:intergenic | 40.0% |
| CTCTGCTCTCTGTTCTATTA+GGG | - | chr8_1:49355824-49355843 | None:intergenic | 40.0% | |
| TCTCTGCTCTCTGTTCTATT+AGG | - | chr8_1:49355825-49355844 | None:intergenic | 40.0% | |
| TGGTCAACCCAGAAAGTAAA+AGG | + | chr8_1:49355846-49355865 | Msa1198040:intron | 40.0% | |
| GGTCAACCCAGAAAGTAAAA+GGG | + | chr8_1:49355847-49355866 | Msa1198040:intron | 40.0% | |
| ! | AGGGGGTATGTGAGAAAATT+GGG | - | chr8_1:49356035-49356054 | None:intergenic | 40.0% |
| ! | AAGGGGGTATGTGAGAAAAT+TGG | - | chr8_1:49356036-49356055 | None:intergenic | 40.0% |
| ! | CATATAGTGGAAAAGGTGGA+GGG | - | chr8_1:49356063-49356082 | None:intergenic | 40.0% |
| ! | CATCCATATAGTGGAAAAGG+TGG | - | chr8_1:49356067-49356086 | None:intergenic | 40.0% |
| TAAAAAGGGAAGGTGGCAAT+TGG | - | chr8_1:49356102-49356121 | None:intergenic | 40.0% | |
| AGGAGACAAAGTGAGTAGAT+GGG | - | chr8_1:49356131-49356150 | None:intergenic | 40.0% | |
| AAGGAGACAAAGTGAGTAGA+TGG | - | chr8_1:49356132-49356151 | None:intergenic | 40.0% | |
| AAGAAAGTCTCTCATGGAAC+GGG | - | chr8_1:49356158-49356177 | None:intergenic | 40.0% | |
| AAAAACAAATTAGGCTGGGG+AGG | + | chr8_1:49356285-49356304 | Msa1198040:intron | 40.0% | |
| AAAACAAATTAGGCTGGGGA+GGG | + | chr8_1:49356286-49356305 | Msa1198040:intron | 40.0% | |
| ATCCTTTGTAGGTTGCAAGT+TGG | + | chr8_1:49356387-49356406 | Msa1198040:intron | 40.0% | |
| !!! | GTCGTCTGAGTTGTCATTTT+GGG | + | chr8_1:49356481-49356500 | Msa1198040:CDS | 40.0% |
| CAAACCATGGCAAAGTTTGT+CGG | - | chr8_1:49356620-49356639 | None:intergenic | 40.0% | |
| TATCTCAACTTGTACGGTTC+AGG | - | chr8_1:49356679-49356698 | None:intergenic | 40.0% | |
| AGTAATGGTCCTTGATTGCA+AGG | + | chr8_1:49356766-49356785 | Msa1198040:three_prime_UTR | 40.0% | |
| TTCTTCAAGCTGTGTGCTTG+AGG | + | chr8_1:49350071-49350090 | Msa1198040:five_prime_UTR | 45.0% | |
| CGATTATACGATGTTGCTGC+TGG | + | chr8_1:49350548-49350567 | Msa1198040:CDS | 45.0% | |
| !! | GAGAGTATCCTACAAAGTCG+GGG | - | chr8_1:49350701-49350720 | None:intergenic | 45.0% |
| ACTTTAGTCCCTGAATCGGA+AGG | + | chr8_1:49350881-49350900 | Msa1198040:intron | 45.0% | |
| CTTTAGTCCCTGAATCGGAA+GGG | + | chr8_1:49350882-49350901 | Msa1198040:intron | 45.0% | |
| GACTAACGGAGTCTACATTC+AGG | - | chr8_1:49351017-49351036 | None:intergenic | 45.0% | |
| AGTCCCTGAAATTGACCATG+CGG | + | chr8_1:49351042-49351061 | Msa1198040:intron | 45.0% | |
| AAAGTCAGGGACGAATTTGG+TGG | + | chr8_1:49351274-49351293 | Msa1198040:intron | 45.0% | |
| ! | AGGTGAGGCACGTTTTATGA+AGG | + | chr8_1:49351664-49351683 | Msa1198040:intron | 45.0% |
| !!! | CCTCCGTCTTCTGTCATTTT+TGG | - | chr8_1:49351745-49351764 | None:intergenic | 45.0% |
| CCAAAAATGACAGAAGACGG+AGG | + | chr8_1:49351742-49351761 | Msa1198040:intron | 45.0% | |
| TCCACCATCTCCATTGGAAA+GGG | - | chr8_1:49351836-49351855 | None:intergenic | 45.0% | |
| TTCCACCATCTCCATTGGAA+AGG | - | chr8_1:49351837-49351856 | None:intergenic | 45.0% | |
| GTGGAAGAGACTGAGAACAA+GGG | + | chr8_1:49351851-49351870 | Msa1198040:intron | 45.0% | |
| AGACTGAGAACAAGGGAGAT+AGG | + | chr8_1:49351858-49351877 | Msa1198040:intron | 45.0% | |
| ACGGGGATATTGGAAGAACA+GGG | + | chr8_1:49351889-49351908 | Msa1198040:intron | 45.0% | |
| AGGATCAGATGAGAGTGGAT+TGG | + | chr8_1:49351912-49351931 | Msa1198040:intron | 45.0% | |
| !! | GAGTTGAGATAATGGGAGCT+GGG | + | chr8_1:49351947-49351966 | Msa1198040:intron | 45.0% |
| AGATGAAGACTCTGTGACGT+AGG | + | chr8_1:49352065-49352084 | Msa1198040:intron | 45.0% | |
| ! | CAGCTTTACCCAATTTTGGG+AGG | - | chr8_1:49352137-49352156 | None:intergenic | 45.0% |
| GAATCCATCGCATCTACTCA+TGG | - | chr8_1:49352212-49352231 | None:intergenic | 45.0% | |
| TCGTATGGATGACACAACAC+AGG | - | chr8_1:49352380-49352399 | None:intergenic | 45.0% | |
| TGTGTCATCCATACGAGTCT+AGG | + | chr8_1:49352384-49352403 | Msa1198040:intron | 45.0% | |
| GATAGAAGCCGCAAAGATTC+TGG | - | chr8_1:49352671-49352690 | None:intergenic | 45.0% | |
| GTCTTTGCAATAGCCTTTGG+AGG | + | chr8_1:49353094-49353113 | Msa1198040:CDS | 45.0% | |
| CACGGAATGAGTCAAGAACA+TGG | - | chr8_1:49353371-49353390 | None:intergenic | 45.0% | |
| CATGTTCTTGACTCATTCCG+TGG | + | chr8_1:49353369-49353388 | Msa1198040:CDS | 45.0% | |
| CGATACGAACAAGTGTACCA+CGG | - | chr8_1:49353389-49353408 | None:intergenic | 45.0% | |
| AATGTGGAGTTGCATGAGAC+AGG | - | chr8_1:49353534-49353553 | None:intergenic | 45.0% | |
| CCCCAGAACCTGCAAAATTT+AGG | - | chr8_1:49353837-49353856 | None:intergenic | 45.0% | |
| !!! | AATTTTGCAGGTTCTGGGGA+CGG | + | chr8_1:49353838-49353857 | Msa1198040:intron | 45.0% |
| ! | GCATCTATGCATGGAGTGTT+CGG | + | chr8_1:49353863-49353882 | Msa1198040:CDS | 45.0% |
| ! | GGTGTTTAAGGCTGCAATGA+AGG | + | chr8_1:49354059-49354078 | Msa1198040:intron | 45.0% |
| GCAACTCAAATGCCGCAATT+AGG | + | chr8_1:49354081-49354100 | Msa1198040:intron | 45.0% | |
| ACTCAAATGCCGCAATTAGG+CGG | + | chr8_1:49354084-49354103 | Msa1198040:intron | 45.0% | |
| TGCCATCATGGTACACATTC+TGG | + | chr8_1:49354421-49354440 | Msa1198040:intron | 45.0% | |
| CATTCTGGCGTCACATTTGA+TGG | + | chr8_1:49354436-49354455 | Msa1198040:intron | 45.0% | |
| TCAAGGGCAGTGCTATGATA+GGG | - | chr8_1:49354792-49354811 | None:intergenic | 45.0% | |
| AACAGTGTACTCGACCTTTC+TGG | + | chr8_1:49354841-49354860 | Msa1198040:intron | 45.0% | |
| TAAGAAGAGGCTGACCAGAA+AGG | - | chr8_1:49354858-49354877 | None:intergenic | 45.0% | |
| ! | TTTCTGGTCAGCCTCTTCTT+AGG | + | chr8_1:49354857-49354876 | Msa1198040:intron | 45.0% |
| TAGGTATCCCTTTATGAGCC+TGG | + | chr8_1:49354876-49354895 | Msa1198040:intron | 45.0% | |
| TGGTTGTCCAGGCTCATAAA+GGG | - | chr8_1:49354886-49354905 | None:intergenic | 45.0% | |
| AAATCCTCCCTTGAAGGCTA+AGG | + | chr8_1:49354944-49354963 | Msa1198040:intron | 45.0% | |
| AATCCTCCCTTGAAGGCTAA+GGG | + | chr8_1:49354945-49354964 | Msa1198040:intron | 45.0% | |
| ! | TCTTCTCCCTTAGCCTTCAA+GGG | - | chr8_1:49354954-49354973 | None:intergenic | 45.0% |
| ! | TTCTTCTCCCTTAGCCTTCA+AGG | - | chr8_1:49354955-49354974 | None:intergenic | 45.0% |
| !! | TAGCTTAGGGTGGGTTAGTT+TGG | - | chr8_1:49355267-49355286 | None:intergenic | 45.0% |
| CCTCGTGTTTGTATTACGAG+TGG | - | chr8_1:49355325-49355344 | None:intergenic | 45.0% | |
| CCACTCGTAATACAAACACG+AGG | + | chr8_1:49355322-49355341 | Msa1198040:intron | 45.0% | |
| !! | GATCAAGGAGGTTGATGACT+TGG | - | chr8_1:49355402-49355421 | None:intergenic | 45.0% |
| AATTTGGCACGACGCAATCT+GGG | - | chr8_1:49355465-49355484 | None:intergenic | 45.0% | |
| TAATTTGGCACGACGCAATC+TGG | - | chr8_1:49355466-49355485 | None:intergenic | 45.0% | |
| AATGTTGGACTAATGAGGCG+AGG | - | chr8_1:49355517-49355536 | None:intergenic | 45.0% | |
| !! | GATCAGACGAGTGTTGAATG+CGG | - | chr8_1:49355617-49355636 | None:intergenic | 45.0% |
| TCAACACTCGTCTGATCACA+AGG | + | chr8_1:49355620-49355639 | Msa1198040:intron | 45.0% | |
| ATCACAAGGTTAACACGAGC+TGG | + | chr8_1:49355634-49355653 | Msa1198040:intron | 45.0% | |
| GGTTAACACGAGCTGGAATA+CGG | + | chr8_1:49355641-49355660 | Msa1198040:intron | 45.0% | |
| GTAGACGACGAAGTGACAAT+CGG | - | chr8_1:49355746-49355765 | None:intergenic | 45.0% | |
| !! | CGTCTACTTGATTTGGGACT+TGG | + | chr8_1:49355759-49355778 | Msa1198040:intron | 45.0% |
| ATAGAACAGAGAGCAGAGAC+TGG | + | chr8_1:49355826-49355845 | Msa1198040:intron | 45.0% | |
| TGCATTAATGTGCTGCACGA+TGG | + | chr8_1:49355911-49355930 | Msa1198040:intron | 45.0% | |
| GTAGTGGTTAAGCTTGACCT+GGG | - | chr8_1:49356010-49356029 | None:intergenic | 45.0% | |
| AGTAGTGGTTAAGCTTGACC+TGG | - | chr8_1:49356011-49356030 | None:intergenic | 45.0% | |
| GTGAGAAAATTGGGCAGTAG+TGG | - | chr8_1:49356026-49356045 | None:intergenic | 45.0% | |
| AAAAGGTGGAGGGTCAAAAG+GGG | - | chr8_1:49356053-49356072 | None:intergenic | 45.0% | |
| GAAAAGGTGGAGGGTCAAAA+GGG | - | chr8_1:49356054-49356073 | None:intergenic | 45.0% | |
| ! | CCATATAGTGGAAAAGGTGG+AGG | - | chr8_1:49356064-49356083 | None:intergenic | 45.0% |
| ! | CCTCCACCTTTTCCACTATA+TGG | + | chr8_1:49356061-49356080 | Msa1198040:intron | 45.0% |
| GGAGACAAAGTGAGTAGATG+GGG | - | chr8_1:49356130-49356149 | None:intergenic | 45.0% | |
| TTTCTATTAGGTGGGGTCAC+AGG | - | chr8_1:49356190-49356209 | None:intergenic | 45.0% | |
| CTCCAACTTGCAACCTACAA+AGG | - | chr8_1:49356392-49356411 | None:intergenic | 45.0% | |
| GTTGCAAACATAAGACACCC+AGG | - | chr8_1:49356458-49356477 | None:intergenic | 45.0% | |
| GGGTGTCTTATGTTTGCAAC+CGG | + | chr8_1:49356458-49356477 | Msa1198040:CDS | 45.0% | |
| GGTGTCTTATGTTTGCAACC+GGG | + | chr8_1:49356459-49356478 | Msa1198040:CDS | 45.0% | |
| AAATGACAACTCAGACGACC+CGG | - | chr8_1:49356480-49356499 | None:intergenic | 45.0% | |
| !! | GGTCGTCTGAGTTGTCATTT+TGG | + | chr8_1:49356480-49356499 | Msa1198040:CDS | 45.0% |
| !! | AGGCTCTCTGAAATACCTAC+TGG | - | chr8_1:49356656-49356675 | None:intergenic | 45.0% |
| GGAAATGCACCTTGCAATCA+AGG | - | chr8_1:49356778-49356797 | None:intergenic | 45.0% | |
| AAACTGCAGACTGGTGCATT+TGG | - | chr8_1:49356799-49356818 | None:intergenic | 45.0% | |
| AAATGCACCAGTCTGCAGTT+TGG | + | chr8_1:49356798-49356817 | Msa1198040:three_prime_UTR | 45.0% | |
| !! | ACAATAAATAAATAAAATTA+GGG | - | chr8_1:49350582-49350601 | None:intergenic | 5.0% |
| !! | AACAATAAATAAATAAAATT+AGG | - | chr8_1:49350583-49350602 | None:intergenic | 5.0% |
| GACGAATCCCTTCCGATTCA+GGG | - | chr8_1:49350892-49350911 | None:intergenic | 50.0% | |
| TGACGAATCCCTTCCGATTC+AGG | - | chr8_1:49350893-49350912 | None:intergenic | 50.0% | |
| GTCCCTGAAATTGACCATGC+GGG | + | chr8_1:49351043-49351062 | Msa1198040:intron | 50.0% | |
| TCCCTGAAATTGACCATGCG+GGG | + | chr8_1:49351044-49351063 | Msa1198040:intron | 50.0% | |
| TCCCCGCATGGTCAATTTCA+GGG | - | chr8_1:49351048-49351067 | None:intergenic | 50.0% | |
| ATTGCAAAACAGTCCCCGCA+TGG | - | chr8_1:49351060-49351079 | None:intergenic | 50.0% | |
| TGACGAATCCTCTCCCATTC+AGG | + | chr8_1:49351103-49351122 | Msa1198040:intron | 50.0% | |
| GACGAATCCTCTCCCATTCA+GGG | + | chr8_1:49351104-49351123 | Msa1198040:intron | 50.0% | |
| CTTTAGTCCCTGAATGGGAG+AGG | - | chr8_1:49351114-49351133 | None:intergenic | 50.0% | |
| TGAATGCGCCCTACAAAGTC+AGG | + | chr8_1:49351260-49351279 | Msa1198040:intron | 50.0% | |
| GAATGCGCCCTACAAAGTCA+GGG | + | chr8_1:49351261-49351280 | Msa1198040:intron | 50.0% | |
| ATGAAGGATGTTGGAGCAGG+AGG | + | chr8_1:49351680-49351699 | Msa1198040:intron | 50.0% | |
| CTCGCTTGCGAGATCAACAA+CGG | + | chr8_1:49351707-49351726 | Msa1198040:intron | 50.0% | |
| AATGACAGAAGACGGAGGCT+AGG | + | chr8_1:49351747-49351766 | Msa1198040:intron | 50.0% | |
| TTGCTGTCCTCCCTTTCCAA+TGG | + | chr8_1:49351823-49351842 | Msa1198040:intron | 50.0% | |
| TCCTCCCTTTCCAATGGAGA+TGG | + | chr8_1:49351829-49351848 | Msa1198040:intron | 50.0% | |
| ACCATCTCCATTGGAAAGGG+AGG | - | chr8_1:49351833-49351852 | None:intergenic | 50.0% | |
| TCCCTTTCCAATGGAGATGG+TGG | + | chr8_1:49351832-49351851 | Msa1198040:intron | 50.0% | |
| GTCTCTTCCACCATCTCCAT+TGG | - | chr8_1:49351842-49351861 | None:intergenic | 50.0% | |
| GGTGGAAGAGACTGAGAACA+AGG | + | chr8_1:49351850-49351869 | Msa1198040:intron | 50.0% | |
| AGAACAAGGGAGATAGGACC+AGG | + | chr8_1:49351864-49351883 | Msa1198040:intron | 50.0% | |
| GACGGGGATATTGGAAGAAC+AGG | + | chr8_1:49351888-49351907 | Msa1198040:intron | 50.0% | |
| GGGATATTGGAAGAACAGGG+AGG | + | chr8_1:49351892-49351911 | Msa1198040:intron | 50.0% | |
| !! | GGAGTTGAGATAATGGGAGC+TGG | + | chr8_1:49351946-49351965 | Msa1198040:intron | 50.0% |
| GAAAGGGAGAGAGAGAGTTG+AGG | + | chr8_1:49351993-49352012 | Msa1198040:intron | 50.0% | |
| !! | TTGGGAGGCCCATTTTTGCT+AGG | - | chr8_1:49352122-49352141 | None:intergenic | 50.0% |
| !! | TCTCACTTAGCTTGTGCCCT+CGG | + | chr8_1:49352839-49352858 | Msa1198040:CDS | 50.0% |
| GAAGCTTCTTTCAGCCCTGA+TGG | + | chr8_1:49353555-49353574 | Msa1198040:CDS | 50.0% | |
| ! | TATGCATGGAGTGTTCGGAG+TGG | + | chr8_1:49353868-49353887 | Msa1198040:CDS | 50.0% |
| GAGTGTTCGGAGTGGTATAG+AGG | + | chr8_1:49353876-49353895 | Msa1198040:CDS | 50.0% | |
| CTAGGGGTGGACGACAATAA+AGG | + | chr8_1:49354107-49354126 | Msa1198040:intron | 50.0% | |
| ! | GAGGTATCCCTCACCTTAAG+AGG | + | chr8_1:49354284-49354303 | Msa1198040:intron | 50.0% |
| CGCCAGAATGTGTACCATGA+TGG | - | chr8_1:49354426-49354445 | None:intergenic | 50.0% | |
| TGGCGTCACATTTGATGGGA+TGG | + | chr8_1:49354441-49354460 | Msa1198040:intron | 50.0% | |
| CTCAAGGGCAGTGCTATGAT+AGG | - | chr8_1:49354793-49354812 | None:intergenic | 50.0% | |
| GCTGGAACGTCATCTCTCAA+GGG | - | chr8_1:49354808-49354827 | None:intergenic | 50.0% | |
| TGCTGGAACGTCATCTCTCA+AGG | - | chr8_1:49354809-49354828 | None:intergenic | 50.0% | |
| ! | CTGTTGAAGAGTACAGCTGC+TGG | - | chr8_1:49354826-49354845 | None:intergenic | 50.0% |
| CTGGTTGTCCAGGCTCATAA+AGG | - | chr8_1:49354887-49354906 | None:intergenic | 50.0% | |
| CTTTATGAGCCTGGACAACC+AGG | + | chr8_1:49354885-49354904 | Msa1198040:intron | 50.0% | |
| GTATCAGAACCTGGTTGTCC+AGG | - | chr8_1:49354897-49354916 | None:intergenic | 50.0% | |
| AAGTAGTACAGGATGCTCGG+TGG | - | chr8_1:49354996-49355015 | None:intergenic | 50.0% | |
| ! | TAGAGGCTCTTGTGCTGCTA+CGG | - | chr8_1:49355055-49355074 | None:intergenic | 50.0% |
| TAGCAGCACAAGAGCCTCTA+CGG | + | chr8_1:49355055-49355074 | Msa1198040:intron | 50.0% | |
| CTGTGTTGTGCAACACAGGA+CGG | - | chr8_1:49355129-49355148 | None:intergenic | 50.0% | |
| TGTTGTTGCTGGTGTGTCTC+TGG | - | chr8_1:49355238-49355257 | None:intergenic | 50.0% | |
| !! | CTTAGGGTGGGTTAGTTTGG+TGG | - | chr8_1:49355264-49355283 | None:intergenic | 50.0% |
| GAGGTAGCATAGCTTAGGGT+GGG | - | chr8_1:49355276-49355295 | None:intergenic | 50.0% | |
| TGAGGTAGCATAGCTTAGGG+TGG | - | chr8_1:49355277-49355296 | None:intergenic | 50.0% | |
| ! | CGAGTGGTGTTGGAATCCTA+GGG | - | chr8_1:49355309-49355328 | None:intergenic | 50.0% |
| ! | ACGAGTGGTGTTGGAATCCT+AGG | - | chr8_1:49355310-49355329 | None:intergenic | 50.0% |
| ! | CGTGGCATTGGAGTCTTAGT+AGG | - | chr8_1:49355358-49355377 | None:intergenic | 50.0% |
| !! | CAAGGAGGTTGATGACTTGG+TGG | - | chr8_1:49355399-49355418 | None:intergenic | 50.0% |
| TCTGGGTGATTTCGAAGGAG+AGG | - | chr8_1:49355448-49355467 | None:intergenic | 50.0% | |
| CGCAATCTGGGTGATTTCGA+AGG | - | chr8_1:49355453-49355472 | None:intergenic | 50.0% | |
| AGGTCTAGGAAGCTTAGACG+GGG | - | chr8_1:49355497-49355516 | None:intergenic | 50.0% | |
| GAGGTCTAGGAAGCTTAGAC+GGG | - | chr8_1:49355498-49355517 | None:intergenic | 50.0% | |
| CGAGGTCTAGGAAGCTTAGA+CGG | - | chr8_1:49355499-49355518 | None:intergenic | 50.0% | |
| AAGTGCACGAACAGATTCGG+AGG | + | chr8_1:49355539-49355558 | Msa1198040:intron | 50.0% | |
| ! | AGTGTTGAATGCGGATGCAG+CGG | - | chr8_1:49355608-49355627 | None:intergenic | 50.0% |
| CTTCTCTTCGATGCTGCTGT+TGG | - | chr8_1:49355668-49355687 | None:intergenic | 50.0% | |
| ! | CAACAGCAGCATCGAAGAGA+AGG | + | chr8_1:49355666-49355685 | Msa1198040:intron | 50.0% |
| GAGAAGGCAACCACTTTAGC+CGG | + | chr8_1:49355682-49355701 | Msa1198040:intron | 50.0% | |
| TGAGAGGACTGTTGTCTGTG+TGG | - | chr8_1:49355987-49356006 | None:intergenic | 50.0% | |
| TTAAGCTTGACCTGGGTGAG+AGG | - | chr8_1:49356003-49356022 | None:intergenic | 50.0% | |
| AAAGGTGGAGGGTCAAAAGG+GGG | - | chr8_1:49356052-49356071 | None:intergenic | 50.0% | |
| GGAAAAGGTGGAGGGTCAAA+AGG | - | chr8_1:49356055-49356074 | None:intergenic | 50.0% | |
| TGGGGGAGACATCCATATAG+TGG | - | chr8_1:49356076-49356095 | None:intergenic | 50.0% | |
| AAGGTGGCAATTGGAGTTGG+GGG | - | chr8_1:49356093-49356112 | None:intergenic | 50.0% | |
| GAAGGTGGCAATTGGAGTTG+GGG | - | chr8_1:49356094-49356113 | None:intergenic | 50.0% | |
| GGAAGGTGGCAATTGGAGTT+GGG | - | chr8_1:49356095-49356114 | None:intergenic | 50.0% | |
| TTGGACCTCCTGTTGTGAAG+TGG | + | chr8_1:49356429-49356448 | Msa1198040:CDS | 50.0% | |
| TGGACCTCCTGTTGTGAAGT+GGG | + | chr8_1:49356430-49356449 | Msa1198040:CDS | 50.0% | |
| CCATGGCAAAGTTTGTCGGT+AGG | - | chr8_1:49356616-49356635 | None:intergenic | 50.0% | |
| CCTACCGACAAACTTTGCCA+TGG | + | chr8_1:49356613-49356632 | Msa1198040:three_prime_UTR | 50.0% | |
| CTCAACTTGTACGGTTCAGG+AGG | - | chr8_1:49356676-49356695 | None:intergenic | 50.0% | |
| CACCAGTCTGCAGTTTGGTA+TGG | + | chr8_1:49356803-49356822 | Msa1198040:three_prime_UTR | 50.0% | |
| GACCATACCAAACTGCAGAC+TGG | - | chr8_1:49356808-49356827 | None:intergenic | 50.0% | |
| GTCCCCGCATGGTCAATTTC+AGG | - | chr8_1:49351049-49351068 | None:intergenic | 55.0% | |
| AGGGAGATAGGACCAGGAGA+CGG | + | chr8_1:49351870-49351889 | Msa1198040:intron | 55.0% | |
| CTTCCAATATCCCCGTCTCC+TGG | - | chr8_1:49351885-49351904 | None:intergenic | 55.0% | |
| CAGGGAGGATCAGATGAGAG+TGG | + | chr8_1:49351907-49351926 | Msa1198040:intron | 55.0% | |
| !! | TCAAAGGGCTGAGAAGTGCC+AGG | + | chr8_1:49352912-49352931 | Msa1198040:CDS | 55.0% |
| GGGACGGTAGCATCTATGCA+TGG | + | chr8_1:49353854-49353873 | Msa1198040:CDS | 55.0% | |
| AATGCCGCAATTAGGCGGCT+AGG | + | chr8_1:49354089-49354108 | Msa1198040:intron | 55.0% | |
| ATGCCGCAATTAGGCGGCTA+GGG | + | chr8_1:49354090-49354109 | Msa1198040:intron | 55.0% | |
| GGGGTGGACGACAATAAAGG+CGG | + | chr8_1:49354110-49354129 | Msa1198040:intron | 55.0% | |
| CTCGCACAAGCATGGAAAGC+TGG | - | chr8_1:49354201-49354220 | None:intergenic | 55.0% | |
| CAGCTTTCCATGCTTGTGCG+AGG | + | chr8_1:49354199-49354218 | Msa1198040:intron | 55.0% | |
| ! | TCTCCCTTAGCCTTCAAGGG+AGG | - | chr8_1:49354951-49354970 | None:intergenic | 55.0% |
| ACAAGAGCCTCTACGGTAGC+AGG | + | chr8_1:49355062-49355081 | Msa1198040:intron | 55.0% | |
| TGTGTAGCCTGCTACCGTAG+AGG | - | chr8_1:49355072-49355091 | None:intergenic | 55.0% | |
| TGTTGTGCAACACAGGACGG+CGG | - | chr8_1:49355126-49355145 | None:intergenic | 55.0% | |
| CCTGCTGTGTTGTGCAACAC+AGG | - | chr8_1:49355133-49355152 | None:intergenic | 55.0% | |
| CCTGTGTTGCACAACACAGC+AGG | + | chr8_1:49355130-49355149 | Msa1198040:intron | 55.0% | |
| GGACTAATGAGGCGAGGTCT+AGG | - | chr8_1:49355511-49355530 | None:intergenic | 55.0% | |
| CAACCACTTTAGCCGGAGCT+GGG | + | chr8_1:49355689-49355708 | Msa1198040:intron | 55.0% | |
| AACCACTTTAGCCGGAGCTG+GGG | + | chr8_1:49355690-49355709 | Msa1198040:intron | 55.0% | |
| AGACAACAGTCCTCTCACCC+AGG | + | chr8_1:49355990-49356009 | Msa1198040:intron | 55.0% | |
| GGGAAGGTGGCAATTGGAGT+TGG | - | chr8_1:49356096-49356115 | None:intergenic | 55.0% | |
| TCTCTCATGGAACGGGAGCA+AGG | - | chr8_1:49356151-49356170 | None:intergenic | 55.0% | |
| CAAATTAGGCTGGGGAGGGT+TGG | + | chr8_1:49356290-49356309 | Msa1198040:intron | 55.0% | |
| ! | CTGTTGTGAAGTGGGCTCCT+GGG | + | chr8_1:49356438-49356457 | Msa1198040:CDS | 55.0% |
| GGGAGATAGGACCAGGAGAC+GGG | + | chr8_1:49351871-49351890 | Msa1198040:intron | 60.0% | |
| GGAGATAGGACCAGGAGACG+GGG | + | chr8_1:49351872-49351891 | Msa1198040:intron | 60.0% | |
| GGACCAGGAGACGGGGATAT+TGG | + | chr8_1:49351879-49351898 | Msa1198040:intron | 60.0% | |
| TGCCGCAATTAGGCGGCTAG+GGG | + | chr8_1:49354091-49354110 | Msa1198040:intron | 60.0% | |
| CACCCCTAGCCGCCTAATTG+CGG | - | chr8_1:49354096-49354115 | None:intergenic | 60.0% | |
| AGGCATGCCTCGCACAAGCA+TGG | - | chr8_1:49354209-49354228 | None:intergenic | 60.0% | |
| ! | TGGCAGTGCTGCTGCTGTCT+AGG | - | chr8_1:49355218-49355237 | None:intergenic | 60.0% |
| GCAACCACTTTAGCCGGAGC+TGG | + | chr8_1:49355688-49355707 | Msa1198040:intron | 60.0% | |
| CCTATGGAACACCCCAGCTC+CGG | - | chr8_1:49355704-49355723 | None:intergenic | 60.0% | |
| GGAGCCCACTTCACAACAGG+AGG | - | chr8_1:49356437-49356456 | None:intergenic | 60.0% | |
| CCAGGAGCCCACTTCACAAC+AGG | - | chr8_1:49356440-49356459 | None:intergenic | 60.0% | |
| ! | CCTGTTGTGAAGTGGGCTCC+TGG | + | chr8_1:49356437-49356456 | Msa1198040:CDS | 60.0% |
| CGCAATTAGGCGGCTAGGGG+TGG | + | chr8_1:49354094-49354113 | Msa1198040:intron | 65.0% | |
| CACCCCAGCTCCGGCTAAAG+TGG | - | chr8_1:49355695-49355714 | None:intergenic | 65.0% | |
| ! | CCGGAGCTGGGGTGTTCCAT+AGG | + | chr8_1:49355701-49355720 | Msa1198040:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 49350044 | 49356867 | 49350044 | ID=Msa1198040;Name=Msa1198040 |
| chr8_1 | mRNA | 49350044 | 49356867 | 49350044 | ID=Msa1198040-mRNA-1;Parent=Msa1198040;Name=Msa1198040-mRNA-1;_AED=0.30;_eAED=0.30;_QI=125|1|1|1|1|1|11|320|334 |
| chr8_1 | exon | 49350044 | 49350175 | 49350044 | ID=Msa1198040-mRNA-1:exon:15465;Parent=Msa1198040-mRNA-1 |
| chr8_1 | exon | 49350266 | 49350357 | 49350266 | ID=Msa1198040-mRNA-1:exon:15466;Parent=Msa1198040-mRNA-1 |
| chr8_1 | exon | 49350473 | 49350573 | 49350473 | ID=Msa1198040-mRNA-1:exon:15467;Parent=Msa1198040-mRNA-1 |
| chr8_1 | exon | 49352481 | 49352581 | 49352481 | ID=Msa1198040-mRNA-1:exon:15468;Parent=Msa1198040-mRNA-1 |
| chr8_1 | exon | 49352672 | 49352738 | 49352672 | ID=Msa1198040-mRNA-1:exon:15469;Parent=Msa1198040-mRNA-1 |
| chr8_1 | exon | 49352834 | 49352933 | 49352834 | ID=Msa1198040-mRNA-1:exon:15470;Parent=Msa1198040-mRNA-1 |
| chr8_1 | exon | 49353040 | 49353153 | 49353040 | ID=Msa1198040-mRNA-1:exon:15471;Parent=Msa1198040-mRNA-1 |
| chr8_1 | exon | 49353261 | 49353398 | 49353261 | ID=Msa1198040-mRNA-1:exon:15472;Parent=Msa1198040-mRNA-1 |
| chr8_1 | exon | 49353510 | 49353594 | 49353510 | ID=Msa1198040-mRNA-1:exon:15473;Parent=Msa1198040-mRNA-1 |
| chr8_1 | exon | 49353848 | 49353897 | 49353848 | ID=Msa1198040-mRNA-1:exon:15474;Parent=Msa1198040-mRNA-1 |
| chr8_1 | exon | 49356398 | 49356867 | 49356398 | ID=Msa1198040-mRNA-1:exon:15475;Parent=Msa1198040-mRNA-1 |
| chr8_1 | five_prime_UTR | 49350044 | 49350168 | 49350044 | ID=Msa1198040-mRNA-1:five_prime_utr;Parent=Msa1198040-mRNA-1 |
| chr8_1 | CDS | 49350169 | 49350175 | 49350169 | ID=Msa1198040-mRNA-1:cds;Parent=Msa1198040-mRNA-1 |
| chr8_1 | CDS | 49350266 | 49350357 | 49350266 | ID=Msa1198040-mRNA-1:cds;Parent=Msa1198040-mRNA-1 |
| chr8_1 | CDS | 49350473 | 49350573 | 49350473 | ID=Msa1198040-mRNA-1:cds;Parent=Msa1198040-mRNA-1 |
| chr8_1 | CDS | 49352481 | 49352581 | 49352481 | ID=Msa1198040-mRNA-1:cds;Parent=Msa1198040-mRNA-1 |
| chr8_1 | CDS | 49352672 | 49352738 | 49352672 | ID=Msa1198040-mRNA-1:cds;Parent=Msa1198040-mRNA-1 |
| chr8_1 | CDS | 49352834 | 49352933 | 49352834 | ID=Msa1198040-mRNA-1:cds;Parent=Msa1198040-mRNA-1 |
| chr8_1 | CDS | 49353040 | 49353153 | 49353040 | ID=Msa1198040-mRNA-1:cds;Parent=Msa1198040-mRNA-1 |
| chr8_1 | CDS | 49353261 | 49353398 | 49353261 | ID=Msa1198040-mRNA-1:cds;Parent=Msa1198040-mRNA-1 |
| chr8_1 | CDS | 49353510 | 49353594 | 49353510 | ID=Msa1198040-mRNA-1:cds;Parent=Msa1198040-mRNA-1 |
| chr8_1 | CDS | 49353848 | 49353897 | 49353848 | ID=Msa1198040-mRNA-1:cds;Parent=Msa1198040-mRNA-1 |
| chr8_1 | CDS | 49356398 | 49356547 | 49356398 | ID=Msa1198040-mRNA-1:cds;Parent=Msa1198040-mRNA-1 |
| chr8_1 | three_prime_UTR | 49356548 | 49356867 | 49356548 | ID=Msa1198040-mRNA-1:three_prime_utr;Parent=Msa1198040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
