Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1198230 | XP_024628248.1 | 66.929 | 127 | 33 | 2 | 12 | 138 | 234 | 351 | 2.00e-42 | 157 |
| Msa1198230 | XP_024628248.1 | 66.929 | 127 | 33 | 2 | 92 | 218 | 234 | 351 | 2.00e-42 | 157 |
| Msa1198230 | XP_024628248.1 | 94.828 | 58 | 3 | 0 | 1 | 58 | 294 | 351 | 3.18e-26 | 114 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1198230 | sp|Q6DYE5|U496K_ARATH | 56.579 | 76 | 30 | 1 | 63 | 138 | 294 | 366 | 7.47e-19 | 87.0 |
| Msa1198230 | sp|Q6DYE5|U496K_ARATH | 56.579 | 76 | 30 | 1 | 143 | 218 | 294 | 366 | 7.47e-19 | 87.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0431690 | Msa1198230 | 0.820387 | 7.047359e-53 | -8.615850e-47 |
| Msa1198210 | Msa1198230 | 0.969626 | 2.123177e-130 | -8.615850e-47 |
| Msa1198220 | Msa1198230 | 0.988164 | 5.892080e-173 | -8.615850e-47 |
| Msa1198230 | Msa1292400 | 0.834846 | 2.366733e-56 | -8.615850e-47 |
| Msa1198230 | Msa1407600 | 0.801979 | 6.972442e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1198230 | MtrunA17_Chr8g0367331 | 66.929 | 127 | 33 | 2 | 12 | 138 | 234 | 351 | 1.84e-46 | 157 |
| Msa1198230 | MtrunA17_Chr8g0367331 | 66.929 | 127 | 33 | 2 | 92 | 218 | 234 | 351 | 1.84e-46 | 157 |
| Msa1198230 | MtrunA17_Chr8g0367331 | 94.828 | 58 | 3 | 0 | 1 | 58 | 294 | 351 | 2.92e-30 | 114 |
| Msa1198230 | MtrunA17_Chr1g0157041 | 88.608 | 79 | 8 | 1 | 60 | 138 | 267 | 344 | 1.30e-35 | 129 |
| Msa1198230 | MtrunA17_Chr1g0157041 | 88.608 | 79 | 8 | 1 | 140 | 218 | 267 | 344 | 1.30e-35 | 129 |
| Msa1198230 | MtrunA17_Chr1g0157041 | 86.207 | 58 | 7 | 1 | 1 | 58 | 288 | 344 | 6.55e-20 | 86.7 |
| Msa1198230 | MtrunA17_Chr3g0143271 | 64.198 | 81 | 27 | 1 | 60 | 138 | 273 | 353 | 2.45e-26 | 104 |
| Msa1198230 | MtrunA17_Chr3g0143271 | 64.198 | 81 | 27 | 1 | 140 | 218 | 273 | 353 | 2.45e-26 | 104 |
| Msa1198230 | MtrunA17_Chr3g0143271 | 61.667 | 60 | 21 | 1 | 1 | 58 | 294 | 353 | 8.59e-15 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1198230 | AT1G20180.2 | 56.579 | 76 | 30 | 1 | 63 | 138 | 263 | 335 | 7.09e-20 | 86.7 |
| Msa1198230 | AT1G20180.2 | 56.579 | 76 | 30 | 1 | 143 | 218 | 263 | 335 | 7.09e-20 | 86.7 |
| Msa1198230 | AT1G20180.1 | 56.579 | 76 | 30 | 1 | 63 | 138 | 294 | 366 | 7.60e-20 | 87.0 |
| Msa1198230 | AT1G20180.1 | 56.579 | 76 | 30 | 1 | 143 | 218 | 294 | 366 | 7.60e-20 | 87.0 |
| Msa1198230 | AT3G49070.2 | 44.872 | 78 | 42 | 1 | 61 | 138 | 262 | 338 | 1.53e-11 | 63.2 |
| Msa1198230 | AT3G49070.2 | 44.872 | 78 | 42 | 1 | 141 | 218 | 262 | 338 | 1.53e-11 | 63.2 |
| Msa1198230 | AT3G49070.1 | 44.872 | 78 | 42 | 1 | 61 | 138 | 302 | 378 | 1.86e-11 | 63.2 |
| Msa1198230 | AT3G49070.1 | 44.872 | 78 | 42 | 1 | 141 | 218 | 302 | 378 | 1.86e-11 | 63.2 |
Find 27 sgRNAs with CRISPR-Local
Find 355 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTAAATGTGAAATATTGAAT+AGG | 0.374037 | 8_1:+49573715 | Msa1198230:CDS |
| GTAAATGTGAAATATTGAAT+AGG | 0.374037 | 8_1:+49577171 | Msa1198230:CDS |
| GTAAATGTGAAATATTGAAT+AGG | 0.374037 | 8_1:+49580616 | Msa1198230:CDS |
| CAACTTGATGCTGCTGCAAA+AGG | 0.382116 | 8_1:+49577032 | Msa1198230:CDS |
| CAACTTGATGCTGCTGCAAA+AGG | 0.382116 | 8_1:+49580477 | Msa1198230:CDS |
| AACTTGATGCTGCTGCAAAA+GGG | 0.438252 | 8_1:+49577033 | Msa1198230:CDS |
| AACTTGATGCTGCTGCAAAA+GGG | 0.438252 | 8_1:+49580478 | Msa1198230:CDS |
| TAAATGTGAAATATTGAATA+GGG | 0.440330 | 8_1:+49577172 | Msa1198230:CDS |
| TAAATGTGAAATATTGAATA+GGG | 0.440330 | 8_1:+49580617 | Msa1198230:CDS |
| TAAATGTGAAATATTGAATA+GGG | 0.473542 | 8_1:+49573716 | Msa1198230:CDS |
| ACTTGATGCTGCTGCAAAAG+GGG | 0.547139 | 8_1:+49577034 | Msa1198230:CDS |
| ACTTGATGCTGCTGCAAAAG+GGG | 0.547139 | 8_1:+49580479 | Msa1198230:CDS |
| CTATGAGTAGGATGGTGAAG+AGG | 0.584575 | 8_1:+49573628 | None:intergenic |
| CTATGAGTAGGATGGTGAAG+AGG | 0.584575 | 8_1:+49577084 | Msa1198230:CDS |
| CTATGAGTAGGATGGTGAAG+AGG | 0.584575 | 8_1:+49580529 | Msa1198230:CDS |
| GTTTGTGTGAAGAATAATGT+TGG | 0.590528 | 8_1:+49577146 | Msa1198230:CDS |
| GTTTGTGTGAAGAATAATGT+TGG | 0.590528 | 8_1:+49580591 | Msa1198230:CDS |
| ATGATTTGGATACTATGAGT+AGG | 0.598596 | 8_1:+49573616 | None:intergenic |
| ATGATTTGGATACTATGAGT+AGG | 0.598596 | 8_1:+49577072 | Msa1198230:CDS |
| ATGATTTGGATACTATGAGT+AGG | 0.598596 | 8_1:+49580517 | Msa1198230:CDS |
| GTTTGTGTGAAGAATAATGT+TGG | 0.598996 | 8_1:+49573690 | Msa1198230:CDS |
| GAAGAGGTTGAATGATGAAG+TGG | 0.627772 | 8_1:+49573644 | Msa1198230:CDS |
| GAAGAGGTTGAATGATGAAG+TGG | 0.627772 | 8_1:+49577100 | Msa1198230:CDS |
| GAAGAGGTTGAATGATGAAG+TGG | 0.627772 | 8_1:+49580545 | Msa1198230:CDS |
| TTTGGATACTATGAGTAGGA+TGG | 0.662243 | 8_1:+49573620 | None:intergenic |
| TTTGGATACTATGAGTAGGA+TGG | 0.662243 | 8_1:+49577076 | Msa1198230:CDS |
| TTTGGATACTATGAGTAGGA+TGG | 0.662243 | 8_1:+49580521 | Msa1198230:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTTTTGTTTATTTTCTT+TGG | + | chr8_1:49573947-49573966 | Msa1198230:intron | 10.0% |
| !!! | AATAAATTAAAATCTTTTAG+TGG | + | chr8_1:49574192-49574211 | Msa1198230:intron | 10.0% |
| !!! | AAGTATATATTTATTTTCTT+TGG | + | chr8_1:49575185-49575204 | Msa1198230:intron | 10.0% |
| !!! | AGTATATATTTATTTTCTTT+GGG | + | chr8_1:49575186-49575205 | Msa1198230:intron | 10.0% |
| !! | TATATGTTCTTTAAATATTA+TGG | + | chr8_1:49575790-49575809 | Msa1198230:intron | 10.0% |
| !!! | TTTTATATTGATAAATGATT+TGG | + | chr8_1:49577058-49577077 | Msa1198230:CDS | 10.0% |
| !!! | TAATTTTTGTTTATTTTCTT+TGG | + | chr8_1:49573947-49573966 | Msa1198230:intron | 10.0% |
| !!! | ATTAAATTAAAATCTTTTAG+TGG | + | chr8_1:49577648-49577667 | Msa1198230:intron | 10.0% |
| !!! | AAGTATATATTTATTTTCTT+TGG | + | chr8_1:49575185-49575204 | Msa1198230:intron | 10.0% |
| !!! | AGTATATATTTATTTTCTTT+GGG | + | chr8_1:49575186-49575205 | Msa1198230:intron | 10.0% |
| !! | TATATGTTCTTTAAATATTA+TGG | + | chr8_1:49575790-49575809 | Msa1198230:intron | 10.0% |
| !!! | TTTTATATTGATAAATGATT+TGG | + | chr8_1:49577058-49577077 | Msa1198230:CDS | 10.0% |
| !! | TAAATGTGAAATATTGAATA+GGG | + | chr8_1:49573716-49573735 | Msa1198230:CDS | 15.0% |
| !! | TTACAGAGATAAATAAATAA+AGG | + | chr8_1:49573859-49573878 | Msa1198230:intron | 15.0% |
| !! | TACAGAGATAAATAAATAAA+GGG | + | chr8_1:49573860-49573879 | Msa1198230:intron | 15.0% |
| !! | GAACAAATGATTAAATAAAA+TGG | + | chr8_1:49574263-49574282 | Msa1198230:intron | 15.0% |
| !!! | TTTTAAGTTGAAATAACATA+AGG | + | chr8_1:49574737-49574756 | Msa1198230:intron | 15.0% |
| !! | GAAAAAAATTAAAGTTGTAT+TGG | + | chr8_1:49575094-49575113 | Msa1198230:intron | 15.0% |
| !!! | TCATTTTGAAACAATTTTTT+TGG | + | chr8_1:49575133-49575152 | Msa1198230:intron | 15.0% |
| !! | TTATCTAAACTAAAAAAGAT+TGG | + | chr8_1:49575363-49575382 | Msa1198230:intron | 15.0% |
| !! | TATCTAAACTAAAAAAGATT+GGG | + | chr8_1:49575364-49575383 | Msa1198230:intron | 15.0% |
| !!! | TAATTTTAGATTTGGATTTT+CGG | + | chr8_1:49575387-49575406 | Msa1198230:intron | 15.0% |
| !! | AAATTGAAGAATAATAAGAA+AGG | + | chr8_1:49575554-49575573 | Msa1198230:intron | 15.0% |
| !! | TATTATGGAATGAATTTAAA+AGG | + | chr8_1:49575805-49575824 | Msa1198230:intron | 15.0% |
| !! | ATTATGGAATGAATTTAAAA+GGG | + | chr8_1:49575806-49575825 | Msa1198230:intron | 15.0% |
| !!! | TAGAATTTAATTTATCTACA+TGG | - | chr8_1:49576186-49576205 | None:intergenic | 15.0% |
| !! | TCATAAAGAAAATCAAAATT+AGG | + | chr8_1:49576971-49576990 | Msa1198230:intron | 15.0% |
| !! | TAAATGTGAAATATTGAATA+GGG | + | chr8_1:49573716-49573735 | Msa1198230:CDS | 15.0% |
| !! | TTACAGAGATAAATAAATAA+AGG | + | chr8_1:49573859-49573878 | Msa1198230:intron | 15.0% |
| !! | TACAGAGATAAATAAATAAA+GGG | + | chr8_1:49573860-49573879 | Msa1198230:intron | 15.0% |
| !! | GAACAAATGATTAAATAAAA+TGG | + | chr8_1:49574263-49574282 | Msa1198230:intron | 15.0% |
| !!! | TTTTAAGTTGAAATAACATA+AGG | + | chr8_1:49574737-49574756 | Msa1198230:intron | 15.0% |
| !! | GAAAAAAATTAAAGTTGTAT+TGG | + | chr8_1:49575094-49575113 | Msa1198230:intron | 15.0% |
| !!! | CATTTTGAAACAATTTTTTT+TGG | + | chr8_1:49575134-49575153 | Msa1198230:intron | 15.0% |
| !! | TTATCTAAACTAAAAAAGAT+TGG | + | chr8_1:49575363-49575382 | Msa1198230:intron | 15.0% |
| !! | TATCTAAACTAAAAAAGATT+GGG | + | chr8_1:49575364-49575383 | Msa1198230:intron | 15.0% |
| !!! | TAATTTTAGATTTGGATTTT+CGG | + | chr8_1:49575387-49575406 | Msa1198230:intron | 15.0% |
| !! | AAATTGAAGAATAATAAGAA+AGG | + | chr8_1:49575554-49575573 | Msa1198230:intron | 15.0% |
| !! | TATTATGGAATGAATTTAAA+AGG | + | chr8_1:49575805-49575824 | Msa1198230:intron | 15.0% |
| !! | ATTATGGAATGAATTTAAAA+GGG | + | chr8_1:49575806-49575825 | Msa1198230:intron | 15.0% |
| !!! | TAGAATTTAATTTATCTACA+TGG | - | chr8_1:49576186-49576205 | None:intergenic | 15.0% |
| !! | TCATAAAGAAAATCAAAATT+AGG | + | chr8_1:49576971-49576990 | Msa1198230:intron | 15.0% |
| !! | TAAATGTGAAATATTGAATA+GGG | + | chr8_1:49573716-49573735 | Msa1198230:CDS | 15.0% |
| !! | GTAAATGTGAAATATTGAAT+AGG | + | chr8_1:49573715-49573734 | Msa1198230:CDS | 20.0% |
| !! | AAATAGAAGAGAAATAAGAA+AGG | + | chr8_1:49574435-49574454 | Msa1198230:intron | 20.0% |
| !! | AATAGAAGAGAAATAAGAAA+GGG | + | chr8_1:49574436-49574455 | Msa1198230:intron | 20.0% |
| !!! | TGTCTTTTTCTTATAAAGTT+GGG | - | chr8_1:49575007-49575026 | None:intergenic | 20.0% |
| !!! | TTGTCTTTTTCTTATAAAGT+TGG | - | chr8_1:49575008-49575027 | None:intergenic | 20.0% |
| !!! | AAAGTTGAAGTATTTATTGA+AGG | + | chr8_1:49575060-49575079 | Msa1198230:intron | 20.0% |
| !! | ATTTAGTAAACCTTTATGTT+TGG | + | chr8_1:49575262-49575281 | Msa1198230:intron | 20.0% |
| !!! | AAATCGAAATGAATTAGTTT+GGG | - | chr8_1:49575327-49575346 | None:intergenic | 20.0% |
| !! | AAAATCGAAATGAATTAGTT+TGG | - | chr8_1:49575328-49575347 | None:intergenic | 20.0% |
| !!! | AATTTTAGATTTGGATTTTC+GGG | + | chr8_1:49575388-49575407 | Msa1198230:intron | 20.0% |
| !! | TTATGGAATGAATTTAAAAG+GGG | + | chr8_1:49575807-49575826 | Msa1198230:intron | 20.0% |
| !! | AAGATTTCAAAATACTCTAT+AGG | + | chr8_1:49576061-49576080 | Msa1198230:intron | 20.0% |
| !!! | ATAGGTTTTTAAGATTTGAA+AGG | + | chr8_1:49576079-49576098 | Msa1198230:intron | 20.0% |
| !! | TTAAGATTTGAAAGGAAAAA+AGG | + | chr8_1:49576087-49576106 | Msa1198230:intron | 20.0% |
| !! | TATTTGTAAACATATTCTCA+GGG | - | chr8_1:49576126-49576145 | None:intergenic | 20.0% |
| !! | ATATTTGTAAACATATTCTC+AGG | - | chr8_1:49576127-49576146 | None:intergenic | 20.0% |
| !! | TTTATATGACAAGATTTGAT+TGG | + | chr8_1:49576146-49576165 | Msa1198230:intron | 20.0% |
| !!! | AGAAATTTATTTCTATGCAT+TGG | + | chr8_1:49576212-49576231 | Msa1198230:intron | 20.0% |
| !!! | AGTTTCTTTTAAAACTAACT+CGG | - | chr8_1:49576369-49576388 | None:intergenic | 20.0% |
| !! | AAAATCATATGAATTACATC+AGG | + | chr8_1:49576408-49576427 | Msa1198230:intron | 20.0% |
| !! | ATGATTATTTAAGTAGAGAA+AGG | + | chr8_1:49576658-49576677 | Msa1198230:intron | 20.0% |
| !!! | TATTCTTATTGCTTTATTAG+TGG | + | chr8_1:49576882-49576901 | Msa1198230:intron | 20.0% |
| !! | GTAAATGTGAAATATTGAAT+AGG | + | chr8_1:49573715-49573734 | Msa1198230:CDS | 20.0% |
| !! | AAATAGAAGAGAAATAAGAA+AGG | + | chr8_1:49574435-49574454 | Msa1198230:intron | 20.0% |
| !! | AATAGAAGAGAAATAAGAAA+GGG | + | chr8_1:49574436-49574455 | Msa1198230:intron | 20.0% |
| !!! | TGTCTTTTTCTTATAAAGTT+GGG | - | chr8_1:49575007-49575026 | None:intergenic | 20.0% |
| !!! | TTGTCTTTTTCTTATAAAGT+TGG | - | chr8_1:49575008-49575027 | None:intergenic | 20.0% |
| !!! | AAAGTTGAAGTATTTATTGA+AGG | + | chr8_1:49575060-49575079 | Msa1198230:intron | 20.0% |
| !! | ATTTAGTAAACCTTTATGTT+TGG | + | chr8_1:49575262-49575281 | Msa1198230:intron | 20.0% |
| !!! | AAATCGAAATGAATTAGTTT+GGG | - | chr8_1:49575327-49575346 | None:intergenic | 20.0% |
| !! | AAAATCGAAATGAATTAGTT+TGG | - | chr8_1:49575328-49575347 | None:intergenic | 20.0% |
| !!! | AATTTTAGATTTGGATTTTC+GGG | + | chr8_1:49575388-49575407 | Msa1198230:intron | 20.0% |
| !! | TTATGGAATGAATTTAAAAG+GGG | + | chr8_1:49575807-49575826 | Msa1198230:intron | 20.0% |
| !! | AAGATTTCAAAATACTCTAT+AGG | + | chr8_1:49576061-49576080 | Msa1198230:intron | 20.0% |
| !!! | ATAGGTTTTTAAGATTTGAA+AGG | + | chr8_1:49576079-49576098 | Msa1198230:intron | 20.0% |
| !! | TTAAGATTTGAAAGGAAAAA+AGG | + | chr8_1:49576087-49576106 | Msa1198230:intron | 20.0% |
| !! | TATTTGTAAACATATTCTCA+GGG | - | chr8_1:49576126-49576145 | None:intergenic | 20.0% |
| !! | ATATTTGTAAACATATTCTC+AGG | - | chr8_1:49576127-49576146 | None:intergenic | 20.0% |
| !! | TTTATATGACAAGATTTGAT+TGG | + | chr8_1:49576146-49576165 | Msa1198230:intron | 20.0% |
| !!! | AGAAATTTATTTCTATGCAT+TGG | + | chr8_1:49576212-49576231 | Msa1198230:intron | 20.0% |
| !!! | AGTTTCTTTTAAAACTAACT+CGG | - | chr8_1:49576369-49576388 | None:intergenic | 20.0% |
| !! | AAAATCATATGAATTACATC+AGG | + | chr8_1:49576408-49576427 | Msa1198230:intron | 20.0% |
| !! | ATGATTATTTAAGTAGAGAA+AGG | + | chr8_1:49576658-49576677 | Msa1198230:intron | 20.0% |
| !!! | TATTCTTATTGCTTTATTAG+TGG | + | chr8_1:49576882-49576901 | Msa1198230:intron | 20.0% |
| !! | GTAAATGTGAAATATTGAAT+AGG | + | chr8_1:49573715-49573734 | Msa1198230:CDS | 20.0% |
| ! | AAAGTCACATACAAAATTAG+TGG | + | chr8_1:49574010-49574029 | Msa1198230:intron | 25.0% |
| ! | TTAGCAAATTAATTATGTGC+TGG | - | chr8_1:49574173-49574192 | None:intergenic | 25.0% |
| ! | ATCAATTTGCAAAACAAGAA+GGG | - | chr8_1:49574412-49574431 | None:intergenic | 25.0% |
| ! | AATCAATTTGCAAAACAAGA+AGG | - | chr8_1:49574413-49574432 | None:intergenic | 25.0% |
| !!! | TTCTTGTTTTGCAAATTGAT+TGG | + | chr8_1:49574412-49574431 | Msa1198230:intron | 25.0% |
| !! | AGATGGTTTGAATATTGTTT+TGG | - | chr8_1:49574513-49574532 | None:intergenic | 25.0% |
| !!! | TATCATCGTTTTAGTTCATT+TGG | - | chr8_1:49574588-49574607 | None:intergenic | 25.0% |
| ! | TTAGCACACAAATTAAGAAA+TGG | + | chr8_1:49574941-49574960 | Msa1198230:intron | 25.0% |
| !! | GTCTTTTTCTTATAAAGTTG+GGG | - | chr8_1:49575006-49575025 | None:intergenic | 25.0% |
| !! | TGAAGTATTTATTGAAGGTA+AGG | + | chr8_1:49575065-49575084 | Msa1198230:intron | 25.0% |
| ! | TGTTAGTGAAATGTTGATAT+TGG | + | chr8_1:49575215-49575234 | Msa1198230:intron | 25.0% |
| !!! | GATATTGGTTTAAGTCAAAT+TGG | + | chr8_1:49575230-49575249 | Msa1198230:intron | 25.0% |
| !! | AGATTGGGTAATTTTAGATT+TGG | + | chr8_1:49575379-49575398 | Msa1198230:intron | 25.0% |
| ! | AGATAGATAGATAGATAGAT+AGG | - | chr8_1:49575664-49575683 | None:intergenic | 25.0% |
| !!! | CACAATATTGAGTTTTGATA+CGG | - | chr8_1:49575947-49575966 | None:intergenic | 25.0% |
| ! | ATTTGTAAACATATTCTCAG+GGG | - | chr8_1:49576125-49576144 | None:intergenic | 25.0% |
| ! | ATTTAAGAGTAGCACATTAT+TGG | - | chr8_1:49576437-49576456 | None:intergenic | 25.0% |
| !! | GCTACTCTTAAATATTTTGT+TGG | + | chr8_1:49576444-49576463 | Msa1198230:intron | 25.0% |
| !! | ATTTTGTTGGAGTAAGATTA+AGG | + | chr8_1:49576457-49576476 | Msa1198230:intron | 25.0% |
| ! | CTTTCTCTTAATCTTACATT+GGG | - | chr8_1:49576630-49576649 | None:intergenic | 25.0% |
| ! | TCTTTCTCTTAATCTTACAT+TGG | - | chr8_1:49576631-49576650 | None:intergenic | 25.0% |
| ! | AATGTAAGATTAAGAGAAAG+AGG | + | chr8_1:49576630-49576649 | Msa1198230:intron | 25.0% |
| ! | ATGTAAGATTAAGAGAAAGA+GGG | + | chr8_1:49576631-49576650 | Msa1198230:intron | 25.0% |
| ! | GAATTGCATTGTACTAATAA+CGG | - | chr8_1:49576728-49576747 | None:intergenic | 25.0% |
| ! | AATTCAATGACATTCACAAT+AGG | + | chr8_1:49576743-49576762 | Msa1198230:intron | 25.0% |
| !! | TTTCTTTTCATAGTGTAGTA+GGG | + | chr8_1:49576905-49576924 | Msa1198230:intron | 25.0% |
| ! | AAAGTCACATACAAAATTAG+TGG | + | chr8_1:49574010-49574029 | Msa1198230:intron | 25.0% |
| ! | ATCAATTTGCAAAACAAGAA+GGG | - | chr8_1:49574412-49574431 | None:intergenic | 25.0% |
| ! | AATCAATTTGCAAAACAAGA+AGG | - | chr8_1:49574413-49574432 | None:intergenic | 25.0% |
| !!! | TTCTTGTTTTGCAAATTGAT+TGG | + | chr8_1:49574412-49574431 | Msa1198230:intron | 25.0% |
| !! | AGATGGTTTGAATATTGTTT+TGG | - | chr8_1:49574513-49574532 | None:intergenic | 25.0% |
| !!! | TATCATCGTTTTAGTTCATT+TGG | - | chr8_1:49574588-49574607 | None:intergenic | 25.0% |
| ! | TTAGCACACAAATTAAGAAA+TGG | + | chr8_1:49574941-49574960 | Msa1198230:intron | 25.0% |
| !! | GTCTTTTTCTTATAAAGTTG+GGG | - | chr8_1:49575006-49575025 | None:intergenic | 25.0% |
| !! | TGAAGTATTTATTGAAGGTA+AGG | + | chr8_1:49575065-49575084 | Msa1198230:intron | 25.0% |
| ! | TGTTAGTGAAATGTTGATAT+TGG | + | chr8_1:49575215-49575234 | Msa1198230:intron | 25.0% |
| !!! | GATATTGGTTTAAGTCAAAT+TGG | + | chr8_1:49575230-49575249 | Msa1198230:intron | 25.0% |
| !! | AGATTGGGTAATTTTAGATT+TGG | + | chr8_1:49575379-49575398 | Msa1198230:intron | 25.0% |
| ! | AGATAGATAGATAGATAGAT+AGG | - | chr8_1:49575664-49575683 | None:intergenic | 25.0% |
| !!! | CACAATATTGAGTTTTGATA+CGG | - | chr8_1:49575947-49575966 | None:intergenic | 25.0% |
| ! | ATTTGTAAACATATTCTCAG+GGG | - | chr8_1:49576125-49576144 | None:intergenic | 25.0% |
| ! | ATTTAAGAGTAGCACATTAT+TGG | - | chr8_1:49576437-49576456 | None:intergenic | 25.0% |
| !! | GCTACTCTTAAATATTTTGT+TGG | + | chr8_1:49576444-49576463 | Msa1198230:intron | 25.0% |
| !! | ATTTTGTTGGAGTAAGATTA+AGG | + | chr8_1:49576457-49576476 | Msa1198230:intron | 25.0% |
| ! | CTTTCTCTTAATCTTACATT+GGG | - | chr8_1:49576630-49576649 | None:intergenic | 25.0% |
| ! | TCTTTCTCTTAATCTTACAT+TGG | - | chr8_1:49576631-49576650 | None:intergenic | 25.0% |
| ! | AATGTAAGATTAAGAGAAAG+AGG | + | chr8_1:49576630-49576649 | Msa1198230:intron | 25.0% |
| ! | ATGTAAGATTAAGAGAAAGA+GGG | + | chr8_1:49576631-49576650 | Msa1198230:intron | 25.0% |
| ! | GAATTGCATTGTACTAATAA+CGG | - | chr8_1:49576728-49576747 | None:intergenic | 25.0% |
| ! | AATTCAATGACATTCACAAT+AGG | + | chr8_1:49576743-49576762 | Msa1198230:intron | 25.0% |
| !! | TTTCTTTTCATAGTGTAGTA+GGG | + | chr8_1:49576905-49576924 | Msa1198230:intron | 25.0% |
| TGAAGTGGAACATAGAAAAA+TGG | + | chr8_1:49573659-49573678 | Msa1198230:CDS | 30.0% | |
| GTTTGTGTGAAGAATAATGT+TGG | + | chr8_1:49573690-49573709 | Msa1198230:CDS | 30.0% | |
| TTCTTACCATCAACAAATCT+AGG | + | chr8_1:49573817-49573836 | Msa1198230:intron | 30.0% | |
| AAATAAAGGGAAATGCTAAC+CGG | + | chr8_1:49573873-49573892 | Msa1198230:intron | 30.0% | |
| ! | AAAATTAGTGGATCAAGTAG+AGG | + | chr8_1:49574022-49574041 | Msa1198230:intron | 30.0% |
| CGTAGTTCATATCTTTAGTT+CGG | - | chr8_1:49574101-49574120 | None:intergenic | 30.0% | |
| CTAAAGATATGAACTACGTT+TGG | + | chr8_1:49574103-49574122 | Msa1198230:intron | 30.0% | |
| ! | AGCTTGGACACTATTTTATA+CGG | - | chr8_1:49574129-49574148 | None:intergenic | 30.0% |
| TCAATTTGCAAAACAAGAAG+GGG | - | chr8_1:49574411-49574430 | None:intergenic | 30.0% | |
| CAAATTGATGTACGTTTAGA+TGG | - | chr8_1:49574530-49574549 | None:intergenic | 30.0% | |
| CATCTAAACGTACATCAATT+TGG | + | chr8_1:49574528-49574547 | Msa1198230:intron | 30.0% | |
| GTATTTATTGAAGGTAAGGT+TGG | + | chr8_1:49575069-49575088 | Msa1198230:intron | 30.0% | |
| !! | AAGTGACACTCATTTTGAAA+CGG | + | chr8_1:49575159-49575178 | Msa1198230:intron | 30.0% |
| TACTGATGAACCAAACATAA+AGG | - | chr8_1:49575275-49575294 | None:intergenic | 30.0% | |
| !! | AATATTGAGTTTTGATACGG+TGG | - | chr8_1:49575944-49575963 | None:intergenic | 30.0% |
| !!! | TTCTTTTAAAACTAACTCGG+AGG | - | chr8_1:49576366-49576385 | None:intergenic | 30.0% |
| ATTTAAGTAGAGAAAGGAGT+TGG | + | chr8_1:49576664-49576683 | Msa1198230:intron | 30.0% | |
| TTTAAGTAGAGAAAGGAGTT+GGG | + | chr8_1:49576665-49576684 | Msa1198230:intron | 30.0% | |
| !! | TTGTACTAATAACGGACAAA+GGG | - | chr8_1:49576720-49576739 | None:intergenic | 30.0% |
| !! | ATTGTACTAATAACGGACAA+AGG | - | chr8_1:49576721-49576740 | None:intergenic | 30.0% |
| TGACATTCACAATAGGTATA+TGG | + | chr8_1:49576750-49576769 | Msa1198230:intron | 30.0% | |
| !! | ATTAGTCTTTGCAAGATAGT+TGG | + | chr8_1:49576829-49576848 | Msa1198230:intron | 30.0% |
| ! | GTTTCTTTTCATAGTGTAGT+AGG | + | chr8_1:49576904-49576923 | Msa1198230:intron | 30.0% |
| ACTAAACAACCAACAATACT+TGG | - | chr8_1:49576943-49576962 | None:intergenic | 30.0% | |
| ! | AGTATTGTTGGTTGTTTAGT+TGG | + | chr8_1:49576943-49576962 | Msa1198230:intron | 30.0% |
| ! | ATGATTTGGATACTATGAGT+AGG | + | chr8_1:49577072-49577091 | Msa1198230:CDS | 30.0% |
| TGAAGTGGAACATAGAAAAA+TGG | + | chr8_1:49573659-49573678 | Msa1198230:CDS | 30.0% | |
| GTTTGTGTGAAGAATAATGT+TGG | + | chr8_1:49573690-49573709 | Msa1198230:CDS | 30.0% | |
| TTCTTACCATCAACAAATCT+AGG | + | chr8_1:49573817-49573836 | Msa1198230:intron | 30.0% | |
| AAATAAAGGGAAATGCTAAC+CGG | + | chr8_1:49573873-49573892 | Msa1198230:intron | 30.0% | |
| ! | AAAATTAGTGGATCAAGTAG+AGG | + | chr8_1:49574022-49574041 | Msa1198230:intron | 30.0% |
| CGTAGTTCATATCTTTAGTT+CGG | - | chr8_1:49574101-49574120 | None:intergenic | 30.0% | |
| CTAAAGATATGAACTACGTT+TGG | + | chr8_1:49574103-49574122 | Msa1198230:intron | 30.0% | |
| ! | AGCTTGGACACTATTTTATA+CGG | - | chr8_1:49574129-49574148 | None:intergenic | 30.0% |
| TCAATTTGCAAAACAAGAAG+GGG | - | chr8_1:49574411-49574430 | None:intergenic | 30.0% | |
| CAAATTGATGTACGTTTAGA+TGG | - | chr8_1:49574530-49574549 | None:intergenic | 30.0% | |
| CATCTAAACGTACATCAATT+TGG | + | chr8_1:49574528-49574547 | Msa1198230:intron | 30.0% | |
| GTATTTATTGAAGGTAAGGT+TGG | + | chr8_1:49575069-49575088 | Msa1198230:intron | 30.0% | |
| !! | AAGTGACACTCATTTTGAAA+CGG | + | chr8_1:49575159-49575178 | Msa1198230:intron | 30.0% |
| TACTGATGAACCAAACATAA+AGG | - | chr8_1:49575275-49575294 | None:intergenic | 30.0% | |
| !! | AATATTGAGTTTTGATACGG+TGG | - | chr8_1:49575944-49575963 | None:intergenic | 30.0% |
| !!! | TTCTTTTAAAACTAACTCGG+AGG | - | chr8_1:49576366-49576385 | None:intergenic | 30.0% |
| ATTTAAGTAGAGAAAGGAGT+TGG | + | chr8_1:49576664-49576683 | Msa1198230:intron | 30.0% | |
| TTTAAGTAGAGAAAGGAGTT+GGG | + | chr8_1:49576665-49576684 | Msa1198230:intron | 30.0% | |
| !! | TTGTACTAATAACGGACAAA+GGG | - | chr8_1:49576720-49576739 | None:intergenic | 30.0% |
| !! | ATTGTACTAATAACGGACAA+AGG | - | chr8_1:49576721-49576740 | None:intergenic | 30.0% |
| TGACATTCACAATAGGTATA+TGG | + | chr8_1:49576750-49576769 | Msa1198230:intron | 30.0% | |
| !! | ATTAGTCTTTGCAAGAAAGT+TGG | + | chr8_1:49580274-49580293 | Msa1198230:intron | 30.0% |
| ! | GTTTCTTTTCATAGTGTAGT+AGG | + | chr8_1:49576904-49576923 | Msa1198230:intron | 30.0% |
| ACTAAACAACCAACAATACT+TGG | - | chr8_1:49576943-49576962 | None:intergenic | 30.0% | |
| ! | AGTATTGTTGGTTGTTTAGT+TGG | + | chr8_1:49576943-49576962 | Msa1198230:intron | 30.0% |
| ! | ATGATTTGGATACTATGAGT+AGG | + | chr8_1:49577072-49577091 | Msa1198230:CDS | 30.0% |
| TGAAGTGGAACATAGAAAAA+TGG | + | chr8_1:49573659-49573678 | Msa1198230:CDS | 30.0% | |
| GTTTGTGTGAAGAATAATGT+TGG | + | chr8_1:49573690-49573709 | Msa1198230:CDS | 30.0% | |
| !!! | AGATCAAGAGTCTAGCTTTT+TGG | + | chr8_1:49573755-49573774 | Msa1198230:CDS | 35.0% |
| !! | AAGTCTCCTAGATTTGTTGA+TGG | - | chr8_1:49573826-49573845 | None:intergenic | 35.0% |
| CTACGTATATACCTCTTCTA+GGG | - | chr8_1:49573983-49574002 | None:intergenic | 35.0% | |
| ACTACGTATATACCTCTTCT+AGG | - | chr8_1:49573984-49574003 | None:intergenic | 35.0% | |
| AACAATCATCTCTTTCTCCA+CGG | + | chr8_1:49574361-49574380 | Msa1198230:intron | 35.0% | |
| CAATTTGCAAAACAAGAAGG+GGG | - | chr8_1:49574410-49574429 | None:intergenic | 35.0% | |
| AAACGACACTCATTGTGAAA+CGG | - | chr8_1:49574915-49574934 | None:intergenic | 35.0% | |
| !! | TTCACAATGAGTGTCGTTTA+AGG | + | chr8_1:49574916-49574935 | Msa1198230:intron | 35.0% |
| ! | TGTTTGGTTCATCAGTATAC+TGG | + | chr8_1:49575278-49575297 | Msa1198230:intron | 35.0% |
| !!! | ATTTGGATTTTCGGGTTCAA+CGG | + | chr8_1:49575396-49575415 | Msa1198230:intron | 35.0% |
| TACAAAGCACAACTAGAGAT+GGG | - | chr8_1:49575525-49575544 | None:intergenic | 35.0% | |
| ATACAAAGCACAACTAGAGA+TGG | - | chr8_1:49575526-49575545 | None:intergenic | 35.0% | |
| ! | ATTTTGTAGTGCCTCATGTT+TGG | + | chr8_1:49575895-49575914 | Msa1198230:intron | 35.0% |
| ACAATCTATCTCCAAACATG+AGG | - | chr8_1:49575909-49575928 | None:intergenic | 35.0% | |
| AGAAGAGATAGACACAAAGT+CGG | + | chr8_1:49576575-49576594 | Msa1198230:intron | 35.0% | |
| ! | TGGGATTTGATGACTTTAAG+CGG | - | chr8_1:49576611-49576630 | None:intergenic | 35.0% |
| ! | ATTGCACTTGTTACATCACA+TGG | + | chr8_1:49576856-49576875 | Msa1198230:intron | 35.0% |
| TTTGGATACTATGAGTAGGA+TGG | + | chr8_1:49577076-49577095 | Msa1198230:CDS | 35.0% | |
| !!! | AGATCAAGAGTCTAGCTTTT+TGG | + | chr8_1:49573755-49573774 | Msa1198230:CDS | 35.0% |
| !! | AAGTCTCCTAGATTTGTTGA+TGG | - | chr8_1:49573826-49573845 | None:intergenic | 35.0% |
| CTACGTATATACCTCTTCTA+GGG | - | chr8_1:49573983-49574002 | None:intergenic | 35.0% | |
| ACTACGTATATACCTCTTCT+AGG | - | chr8_1:49573984-49574003 | None:intergenic | 35.0% | |
| AACAATCATCTCTTTCTCCA+CGG | + | chr8_1:49574361-49574380 | Msa1198230:intron | 35.0% | |
| CAATTTGCAAAACAAGAAGG+GGG | - | chr8_1:49574410-49574429 | None:intergenic | 35.0% | |
| AAACGACACTCATTGTGAAA+CGG | - | chr8_1:49574915-49574934 | None:intergenic | 35.0% | |
| !! | TTCACAATGAGTGTCGTTTA+AGG | + | chr8_1:49574916-49574935 | Msa1198230:intron | 35.0% |
| ! | TGTTTGGTTCATCAGTATAC+TGG | + | chr8_1:49575278-49575297 | Msa1198230:intron | 35.0% |
| !!! | ATTTGGATTTTCGGGTTCAA+CGG | + | chr8_1:49575396-49575415 | Msa1198230:intron | 35.0% |
| TACAAAGCACAACTAGAGAT+GGG | - | chr8_1:49575525-49575544 | None:intergenic | 35.0% | |
| ATACAAAGCACAACTAGAGA+TGG | - | chr8_1:49575526-49575545 | None:intergenic | 35.0% | |
| ! | ATTTTGTAGTGCCTCATGTT+TGG | + | chr8_1:49575895-49575914 | Msa1198230:intron | 35.0% |
| ACAATCTATCTCCAAACATG+AGG | - | chr8_1:49575909-49575928 | None:intergenic | 35.0% | |
| AGAAGAGATAGACACAAAGT+CGG | + | chr8_1:49576575-49576594 | Msa1198230:intron | 35.0% | |
| ! | TGGGATTTGATGACTTTAAG+CGG | - | chr8_1:49576611-49576630 | None:intergenic | 35.0% |
| ! | ATTGCACTTGTTACATCACA+TGG | + | chr8_1:49576856-49576875 | Msa1198230:intron | 35.0% |
| TTTGGATACTATGAGTAGGA+TGG | + | chr8_1:49577076-49577095 | Msa1198230:CDS | 35.0% | |
| !!! | AGATCAAGAGTCTAGCTTTT+TGG | + | chr8_1:49573755-49573774 | Msa1198230:CDS | 35.0% |
| GAAGAGGTTGAATGATGAAG+TGG | + | chr8_1:49573644-49573663 | Msa1198230:CDS | 40.0% | |
| !!! | GTCTAGCTTTTTGGATCAGT+TGG | + | chr8_1:49573764-49573783 | Msa1198230:CDS | 40.0% |
| TACTTCCTTAACCTGTACTC+CGG | - | chr8_1:49573902-49573921 | None:intergenic | 40.0% | |
| !!! | CTTGTTGAGCACTGCTTTTT+GGG | + | chr8_1:49574147-49574166 | Msa1198230:intron | 40.0% |
| ! | CTTGTGTCATTAGAGTGCAT+TGG | + | chr8_1:49574295-49574314 | Msa1198230:intron | 40.0% |
| CATTGGAAACATGTACCTCT+AGG | + | chr8_1:49574312-49574331 | Msa1198230:intron | 40.0% | |
| TCGAACTAGTACATGCTTAG+CGG | - | chr8_1:49574475-49574494 | None:intergenic | 40.0% | |
| ! | GACGTTCATCACCTTTAGAA+TGG | + | chr8_1:49575478-49575497 | Msa1198230:intron | 40.0% |
| ACAAAGCACAACTAGAGATG+GGG | - | chr8_1:49575524-49575543 | None:intergenic | 40.0% | |
| ACACACACATTGCATGTTCT+TGG | + | chr8_1:49575765-49575784 | Msa1198230:intron | 40.0% | |
| AGAAACGAGTCAAACTCGTT+AGG | + | chr8_1:49576260-49576279 | Msa1198230:intron | 40.0% | |
| ACTAACTCGGAGGTTAAATG+AGG | - | chr8_1:49576356-49576375 | None:intergenic | 40.0% | |
| AGTCTTTGCAAGATAGTTGG+AGG | + | chr8_1:49576832-49576851 | Msa1198230:intron | 40.0% | |
| TCATAGTGTAGTAGGGTTAG+TGG | + | chr8_1:49576912-49576931 | Msa1198230:intron | 40.0% | |
| AACTTGATGCTGCTGCAAAA+GGG | + | chr8_1:49577033-49577052 | Msa1198230:CDS | 40.0% | |
| GAAGAGGTTGAATGATGAAG+TGG | + | chr8_1:49573644-49573663 | Msa1198230:CDS | 40.0% | |
| !!! | GTCTAGCTTTTTGGATCAGT+TGG | + | chr8_1:49573764-49573783 | Msa1198230:CDS | 40.0% |
| TACTTCCTTAACCTGTACTC+CGG | - | chr8_1:49573902-49573921 | None:intergenic | 40.0% | |
| !!! | CTTGTTGAGCACTGCTTTTT+GGG | + | chr8_1:49574147-49574166 | Msa1198230:intron | 40.0% |
| ! | CTTGTGTCATTAGAGTGCAT+TGG | + | chr8_1:49574295-49574314 | Msa1198230:intron | 40.0% |
| CATTGGAAACATGTACCTCT+AGG | + | chr8_1:49574312-49574331 | Msa1198230:intron | 40.0% | |
| TCGAACTAGTACATGCTTAG+CGG | - | chr8_1:49574475-49574494 | None:intergenic | 40.0% | |
| ! | GACGTTCATCACCTTTAGAA+TGG | + | chr8_1:49575478-49575497 | Msa1198230:intron | 40.0% |
| ACAAAGCACAACTAGAGATG+GGG | - | chr8_1:49575524-49575543 | None:intergenic | 40.0% | |
| ACACACACATTGCATGTTCT+TGG | + | chr8_1:49575765-49575784 | Msa1198230:intron | 40.0% | |
| AGAAACGAGTCAAACTCGTT+AGG | + | chr8_1:49576260-49576279 | Msa1198230:intron | 40.0% | |
| ACTAACTCGGAGGTTAAATG+AGG | - | chr8_1:49576356-49576375 | None:intergenic | 40.0% | |
| AGTCTTTGCAAGAAAGTTGG+AGG | + | chr8_1:49580277-49580296 | Msa1198230:intron | 40.0% | |
| TCATAGTGTAGTAGGGTTAG+TGG | + | chr8_1:49576912-49576931 | Msa1198230:intron | 40.0% | |
| AACTTGATGCTGCTGCAAAA+GGG | + | chr8_1:49577033-49577052 | Msa1198230:CDS | 40.0% | |
| GAAGAGGTTGAATGATGAAG+TGG | + | chr8_1:49573644-49573663 | Msa1198230:CDS | 40.0% | |
| !!! | GTCTAGCTTTTTGGATCAGT+TGG | + | chr8_1:49573764-49573783 | Msa1198230:CDS | 40.0% |
| ACTTCCTTAACCTGTACTCC+GGG | - | chr8_1:49573901-49573920 | None:intergenic | 45.0% | |
| GTTCTTCTAGACCCTAGAAG+AGG | + | chr8_1:49573969-49573988 | Msa1198230:intron | 45.0% | |
| AAAGCAGTGCTCAACAAGCT+TGG | - | chr8_1:49574145-49574164 | None:intergenic | 45.0% | |
| !! | GCTTGTTGAGCACTGCTTTT+TGG | + | chr8_1:49574146-49574165 | Msa1198230:intron | 45.0% |
| AAAACAAGAAGGGGGTCACT+GGG | - | chr8_1:49574402-49574421 | None:intergenic | 45.0% | |
| ! | TGAAGGCGCATCCATTCTAA+AGG | - | chr8_1:49575492-49575511 | None:intergenic | 45.0% |
| GCTCAGCACGCTTAAATATC+GGG | - | chr8_1:49576299-49576318 | None:intergenic | 45.0% | |
| GGCTCAGCACGCTTAAATAT+CGG | - | chr8_1:49576300-49576319 | None:intergenic | 45.0% | |
| ACTCGGAGGTTAAATGAGGT+GGG | - | chr8_1:49576352-49576371 | None:intergenic | 45.0% | |
| AACTCGGAGGTTAAATGAGG+TGG | - | chr8_1:49576353-49576372 | None:intergenic | 45.0% | |
| TAGAGAAAGGAGTTGGGTCA+TGG | + | chr8_1:49576671-49576690 | Msa1198230:intron | 45.0% | |
| AGAGAAAGGAGTTGGGTCAT+GGG | + | chr8_1:49576672-49576691 | Msa1198230:intron | 45.0% | |
| CAACTTGATGCTGCTGCAAA+AGG | + | chr8_1:49577032-49577051 | Msa1198230:CDS | 45.0% | |
| ACTTGATGCTGCTGCAAAAG+GGG | + | chr8_1:49577034-49577053 | Msa1198230:CDS | 45.0% | |
| CTATGAGTAGGATGGTGAAG+AGG | + | chr8_1:49577084-49577103 | Msa1198230:CDS | 45.0% | |
| ACTTCCTTAACCTGTACTCC+GGG | - | chr8_1:49573901-49573920 | None:intergenic | 45.0% | |
| GTTCTTCTAGACCCTAGAAG+AGG | + | chr8_1:49573969-49573988 | Msa1198230:intron | 45.0% | |
| AAAGCAGTGCTCAACAAGCT+TGG | - | chr8_1:49574145-49574164 | None:intergenic | 45.0% | |
| !! | GCTTGTTGAGCACTGCTTTT+TGG | + | chr8_1:49574146-49574165 | Msa1198230:intron | 45.0% |
| AAAACAAGAAGGGGGTCACT+GGG | - | chr8_1:49574402-49574421 | None:intergenic | 45.0% | |
| ! | TGAAGGCGCATCCATTCTAA+AGG | - | chr8_1:49575492-49575511 | None:intergenic | 45.0% |
| GCTCAGCACGCTTAAATATC+GGG | - | chr8_1:49576299-49576318 | None:intergenic | 45.0% | |
| GGCTCAGCACGCTTAAATAT+CGG | - | chr8_1:49576300-49576319 | None:intergenic | 45.0% | |
| ACTCGGAGGTTAAATGAGGT+GGG | - | chr8_1:49576352-49576371 | None:intergenic | 45.0% | |
| AACTCGGAGGTTAAATGAGG+TGG | - | chr8_1:49576353-49576372 | None:intergenic | 45.0% | |
| TAGAGAAAGGAGTTGGGTCA+TGG | + | chr8_1:49576671-49576690 | Msa1198230:intron | 45.0% | |
| AGAGAAAGGAGTTGGGTCAT+GGG | + | chr8_1:49576672-49576691 | Msa1198230:intron | 45.0% | |
| CAACTTGATGCTGCTGCAAA+AGG | + | chr8_1:49577032-49577051 | Msa1198230:CDS | 45.0% | |
| ACTTGATGCTGCTGCAAAAG+GGG | + | chr8_1:49577034-49577053 | Msa1198230:CDS | 45.0% | |
| CTATGAGTAGGATGGTGAAG+AGG | + | chr8_1:49577084-49577103 | Msa1198230:CDS | 45.0% | |
| TGCACGACAACCATGGTTGA+CGG | - | chr8_1:49574338-49574357 | None:intergenic | 50.0% | |
| TGTTGCATGCACGACAACCA+TGG | - | chr8_1:49574345-49574364 | None:intergenic | 50.0% | |
| CAAAACAAGAAGGGGGTCAC+TGG | - | chr8_1:49574403-49574422 | None:intergenic | 50.0% | |
| CGACACTCATTGTGAAACGG+AGG | - | chr8_1:49574912-49574931 | None:intergenic | 50.0% | |
| TCTGAACCACTTACACGCCT+TGG | + | chr8_1:49575424-49575443 | Msa1198230:intron | 50.0% | |
| GGTGATGAACGTCGTGTACA+CGG | - | chr8_1:49575471-49575490 | None:intergenic | 50.0% | |
| AGATGGGGACGAGACATTGA+AGG | - | chr8_1:49575509-49575528 | None:intergenic | 50.0% | |
| AGAAAGGACTAGAAGCCCGA+CGG | + | chr8_1:49575570-49575589 | Msa1198230:intron | 50.0% | |
| TGACACACATGCAAGACCGT+CGG | - | chr8_1:49575589-49575608 | None:intergenic | 50.0% | |
| TATTTAAGCGTGCTGAGCCG+AGG | + | chr8_1:49576301-49576320 | Msa1198230:intron | 50.0% | |
| AGAGACCGAGCTCAAAACCT+CGG | - | chr8_1:49576321-49576340 | None:intergenic | 50.0% | |
| ! | GTGGCTGCACCAAGTATTGT+TGG | + | chr8_1:49576931-49576950 | Msa1198230:intron | 50.0% |
| TGCACGACAACCATGGTTGA+CGG | - | chr8_1:49574338-49574357 | None:intergenic | 50.0% | |
| TGTTGCATGCACGACAACCA+TGG | - | chr8_1:49574345-49574364 | None:intergenic | 50.0% | |
| CAAAACAAGAAGGGGGTCAC+TGG | - | chr8_1:49574403-49574422 | None:intergenic | 50.0% | |
| CGACACTCATTGTGAAACGG+AGG | - | chr8_1:49574912-49574931 | None:intergenic | 50.0% | |
| TCTGAACCACTTACACGCCT+TGG | + | chr8_1:49575424-49575443 | Msa1198230:intron | 50.0% | |
| GGTGATGAACGTCGTGTACA+CGG | - | chr8_1:49575471-49575490 | None:intergenic | 50.0% | |
| AGATGGGGACGAGACATTGA+AGG | - | chr8_1:49575509-49575528 | None:intergenic | 50.0% | |
| AGAAAGGACTAGAAGCCCGA+CGG | + | chr8_1:49575570-49575589 | Msa1198230:intron | 50.0% | |
| TGACACACATGCAAGACCGT+CGG | - | chr8_1:49575589-49575608 | None:intergenic | 50.0% | |
| TATTTAAGCGTGCTGAGCCG+AGG | + | chr8_1:49576301-49576320 | Msa1198230:intron | 50.0% | |
| AGAGACCGAGCTCAAAACCT+CGG | - | chr8_1:49576321-49576340 | None:intergenic | 50.0% | |
| ! | GTGGCTGCACCAAGTATTGT+TGG | + | chr8_1:49576931-49576950 | Msa1198230:intron | 50.0% |
| TTAACCTGTACTCCGGGCAC+CGG | - | chr8_1:49573895-49573914 | None:intergenic | 55.0% | |
| TACCTCTAGGCCGTCAACCA+TGG | + | chr8_1:49574325-49574344 | Msa1198230:intron | 55.0% | |
| AACCATGGTTGACGGCCTAG+AGG | - | chr8_1:49574330-49574349 | None:intergenic | 55.0% | |
| !! | GGACAAGGAAGGTGTTACCG+TGG | - | chr8_1:49574381-49574400 | None:intergenic | 55.0% |
| CTAGTACATGCTTAGCGGCG+CGG | - | chr8_1:49574470-49574489 | None:intergenic | 55.0% | |
| GACACACATGCAAGACCGTC+GGG | - | chr8_1:49575588-49575607 | None:intergenic | 55.0% | |
| !!! | CTGAGCCGAGGTTTTGAGCT+CGG | + | chr8_1:49576313-49576332 | Msa1198230:intron | 55.0% |
| TTAACCTGTACTCCGGGCAC+CGG | - | chr8_1:49573895-49573914 | None:intergenic | 55.0% | |
| TACCTCTAGGCCGTCAACCA+TGG | + | chr8_1:49574325-49574344 | Msa1198230:intron | 55.0% | |
| AACCATGGTTGACGGCCTAG+AGG | - | chr8_1:49574330-49574349 | None:intergenic | 55.0% | |
| !! | GGACAAGGAAGGTGTTACCG+TGG | - | chr8_1:49574381-49574400 | None:intergenic | 55.0% |
| TAGTACATGCTTAGCGGCGC+GGG | - | chr8_1:49574469-49574488 | None:intergenic | 55.0% | |
| CTAGTACATGCTTAGCGGCG+CGG | - | chr8_1:49574470-49574489 | None:intergenic | 55.0% | |
| GACACACATGCAAGACCGTC+GGG | - | chr8_1:49575588-49575607 | None:intergenic | 55.0% | |
| !!! | CTGAGCCGAGGTTTTGAGCT+CGG | + | chr8_1:49576313-49576332 | Msa1198230:intron | 55.0% |
| GGGAAATGCTAACCGGTGCC+CGG | + | chr8_1:49573880-49573899 | Msa1198230:intron | 60.0% | |
| GGTGCCCGGAGTACAGGTTA+AGG | + | chr8_1:49573894-49573913 | Msa1198230:intron | 60.0% | |
| AGAAGGGGGTCACTGGGACA+AGG | - | chr8_1:49574396-49574415 | None:intergenic | 60.0% | |
| TACACGGCTCCCGTGATCCA+TGG | - | chr8_1:49575455-49575474 | None:intergenic | 60.0% | |
| GGGAAATGCTAACCGGTGCC+CGG | + | chr8_1:49573880-49573899 | Msa1198230:intron | 60.0% | |
| GGTGCCCGGAGTACAGGTTA+AGG | + | chr8_1:49573894-49573913 | Msa1198230:intron | 60.0% | |
| AGAAGGGGGTCACTGGGACA+AGG | - | chr8_1:49574396-49574415 | None:intergenic | 60.0% | |
| TACACGGCTCCCGTGATCCA+TGG | - | chr8_1:49575455-49575474 | None:intergenic | 60.0% | |
| CTAACCGGTGCCCGGAGTAC+AGG | + | chr8_1:49573888-49573907 | Msa1198230:intron | 65.0% | |
| GGGGGTCACTGGGACAAGGA+AGG | - | chr8_1:49574392-49574411 | None:intergenic | 65.0% | |
| CTTGGCGCCGCCATGGATCA+CGG | + | chr8_1:49575442-49575461 | Msa1198230:intron | 65.0% | |
| TTGGCGCCGCCATGGATCAC+GGG | + | chr8_1:49575443-49575462 | Msa1198230:intron | 65.0% | |
| ACGGCTCCCGTGATCCATGG+CGG | - | chr8_1:49575452-49575471 | None:intergenic | 65.0% | |
| CTAACCGGTGCCCGGAGTAC+AGG | + | chr8_1:49573888-49573907 | Msa1198230:intron | 65.0% | |
| GGGGGTCACTGGGACAAGGA+AGG | - | chr8_1:49574392-49574411 | None:intergenic | 65.0% | |
| CTTGGCGCCGCCATGGATCA+CGG | + | chr8_1:49575442-49575461 | Msa1198230:intron | 65.0% | |
| TTGGCGCCGCCATGGATCAC+GGG | + | chr8_1:49575443-49575462 | Msa1198230:intron | 65.0% | |
| ACGGCTCCCGTGATCCATGG+CGG | - | chr8_1:49575452-49575471 | None:intergenic | 65.0% | |
| GCGGCGCCAAGGCGTGTAAG+TGG | - | chr8_1:49575433-49575452 | None:intergenic | 70.0% | |
| TACACGCCTTGGCGCCGCCA+TGG | + | chr8_1:49575435-49575454 | Msa1198230:intron | 70.0% | |
| CGTGATCCATGGCGGCGCCA+AGG | - | chr8_1:49575444-49575463 | None:intergenic | 70.0% | |
| GCGGCGCCAAGGCGTGTAAG+TGG | - | chr8_1:49575433-49575452 | None:intergenic | 70.0% | |
| TACACGCCTTGGCGCCGCCA+TGG | + | chr8_1:49575435-49575454 | Msa1198230:intron | 70.0% | |
| CGTGATCCATGGCGGCGCCA+AGG | - | chr8_1:49575444-49575463 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 49573630 | 49580704 | 49573630 | ID=Msa1198230;Name=Msa1198230 |
| chr8_1 | mRNA | 49573630 | 49580704 | 49573630 | ID=Msa1198230-mRNA-1;Parent=Msa1198230;Name=Msa1198230-mRNA-1;_AED=0.40;_eAED=0.40;_QI=0|0|0|1|0|0|3|0|218 |
| chr8_1 | exon | 49573630 | 49573803 | 49573630 | ID=Msa1198230-mRNA-1:exon:15554;Parent=Msa1198230-mRNA-1 |
| chr8_1 | exon | 49577020 | 49577259 | 49577020 | ID=Msa1198230-mRNA-1:exon:15555;Parent=Msa1198230-mRNA-1 |
| chr8_1 | exon | 49580465 | 49580704 | 49580465 | ID=Msa1198230-mRNA-1:exon:15556;Parent=Msa1198230-mRNA-1 |
| chr8_1 | CDS | 49573630 | 49573803 | 49573630 | ID=Msa1198230-mRNA-1:cds;Parent=Msa1198230-mRNA-1 |
| chr8_1 | CDS | 49577020 | 49577259 | 49577020 | ID=Msa1198230-mRNA-1:cds;Parent=Msa1198230-mRNA-1 |
| chr8_1 | CDS | 49580465 | 49580704 | 49580465 | ID=Msa1198230-mRNA-1:cds;Parent=Msa1198230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
