AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1198230


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1198230 MtrunA17_Chr8g0367331 66.929 127 33 2 12 138 234 351 1.84e-46 157
Msa1198230 MtrunA17_Chr8g0367331 66.929 127 33 2 92 218 234 351 1.84e-46 157
Msa1198230 MtrunA17_Chr8g0367331 94.828 58 3 0 1 58 294 351 2.92e-30 114
Msa1198230 MtrunA17_Chr1g0157041 88.608 79 8 1 60 138 267 344 1.30e-35 129
Msa1198230 MtrunA17_Chr1g0157041 88.608 79 8 1 140 218 267 344 1.30e-35 129
Msa1198230 MtrunA17_Chr1g0157041 86.207 58 7 1 1 58 288 344 6.55e-20 86.7
Msa1198230 MtrunA17_Chr3g0143271 64.198 81 27 1 60 138 273 353 2.45e-26 104
Msa1198230 MtrunA17_Chr3g0143271 64.198 81 27 1 140 218 273 353 2.45e-26 104
Msa1198230 MtrunA17_Chr3g0143271 61.667 60 21 1 1 58 294 353 8.59e-15 72.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1198230 AT1G20180.2 56.579 76 30 1 63 138 263 335 7.09e-20 86.7
Msa1198230 AT1G20180.2 56.579 76 30 1 143 218 263 335 7.09e-20 86.7
Msa1198230 AT1G20180.1 56.579 76 30 1 63 138 294 366 7.60e-20 87.0
Msa1198230 AT1G20180.1 56.579 76 30 1 143 218 294 366 7.60e-20 87.0
Msa1198230 AT3G49070.2 44.872 78 42 1 61 138 262 338 1.53e-11 63.2
Msa1198230 AT3G49070.2 44.872 78 42 1 141 218 262 338 1.53e-11 63.2
Msa1198230 AT3G49070.1 44.872 78 42 1 61 138 302 378 1.86e-11 63.2
Msa1198230 AT3G49070.1 44.872 78 42 1 141 218 302 378 1.86e-11 63.2

Find 27 sgRNAs with CRISPR-Local

Find 355 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTAAATGTGAAATATTGAAT+AGG 0.374037 8_1:+49573715 Msa1198230:CDS
GTAAATGTGAAATATTGAAT+AGG 0.374037 8_1:+49577171 Msa1198230:CDS
GTAAATGTGAAATATTGAAT+AGG 0.374037 8_1:+49580616 Msa1198230:CDS
CAACTTGATGCTGCTGCAAA+AGG 0.382116 8_1:+49577032 Msa1198230:CDS
CAACTTGATGCTGCTGCAAA+AGG 0.382116 8_1:+49580477 Msa1198230:CDS
AACTTGATGCTGCTGCAAAA+GGG 0.438252 8_1:+49577033 Msa1198230:CDS
AACTTGATGCTGCTGCAAAA+GGG 0.438252 8_1:+49580478 Msa1198230:CDS
TAAATGTGAAATATTGAATA+GGG 0.440330 8_1:+49577172 Msa1198230:CDS
TAAATGTGAAATATTGAATA+GGG 0.440330 8_1:+49580617 Msa1198230:CDS
TAAATGTGAAATATTGAATA+GGG 0.473542 8_1:+49573716 Msa1198230:CDS
ACTTGATGCTGCTGCAAAAG+GGG 0.547139 8_1:+49577034 Msa1198230:CDS
ACTTGATGCTGCTGCAAAAG+GGG 0.547139 8_1:+49580479 Msa1198230:CDS
CTATGAGTAGGATGGTGAAG+AGG 0.584575 8_1:+49573628 None:intergenic
CTATGAGTAGGATGGTGAAG+AGG 0.584575 8_1:+49577084 Msa1198230:CDS
CTATGAGTAGGATGGTGAAG+AGG 0.584575 8_1:+49580529 Msa1198230:CDS
GTTTGTGTGAAGAATAATGT+TGG 0.590528 8_1:+49577146 Msa1198230:CDS
GTTTGTGTGAAGAATAATGT+TGG 0.590528 8_1:+49580591 Msa1198230:CDS
ATGATTTGGATACTATGAGT+AGG 0.598596 8_1:+49573616 None:intergenic
ATGATTTGGATACTATGAGT+AGG 0.598596 8_1:+49577072 Msa1198230:CDS
ATGATTTGGATACTATGAGT+AGG 0.598596 8_1:+49580517 Msa1198230:CDS
GTTTGTGTGAAGAATAATGT+TGG 0.598996 8_1:+49573690 Msa1198230:CDS
GAAGAGGTTGAATGATGAAG+TGG 0.627772 8_1:+49573644 Msa1198230:CDS
GAAGAGGTTGAATGATGAAG+TGG 0.627772 8_1:+49577100 Msa1198230:CDS
GAAGAGGTTGAATGATGAAG+TGG 0.627772 8_1:+49580545 Msa1198230:CDS
TTTGGATACTATGAGTAGGA+TGG 0.662243 8_1:+49573620 None:intergenic
TTTGGATACTATGAGTAGGA+TGG 0.662243 8_1:+49577076 Msa1198230:CDS
TTTGGATACTATGAGTAGGA+TGG 0.662243 8_1:+49580521 Msa1198230:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TAATTTTTGTTTATTTTCTT+TGG + chr8_1:49573947-49573966 Msa1198230:intron 10.0%
!!! AATAAATTAAAATCTTTTAG+TGG + chr8_1:49574192-49574211 Msa1198230:intron 10.0%
!!! AAGTATATATTTATTTTCTT+TGG + chr8_1:49575185-49575204 Msa1198230:intron 10.0%
!!! AGTATATATTTATTTTCTTT+GGG + chr8_1:49575186-49575205 Msa1198230:intron 10.0%
!! TATATGTTCTTTAAATATTA+TGG + chr8_1:49575790-49575809 Msa1198230:intron 10.0%
!!! TTTTATATTGATAAATGATT+TGG + chr8_1:49577058-49577077 Msa1198230:CDS 10.0%
!!! TAATTTTTGTTTATTTTCTT+TGG + chr8_1:49573947-49573966 Msa1198230:intron 10.0%
!!! ATTAAATTAAAATCTTTTAG+TGG + chr8_1:49577648-49577667 Msa1198230:intron 10.0%
!!! AAGTATATATTTATTTTCTT+TGG + chr8_1:49575185-49575204 Msa1198230:intron 10.0%
!!! AGTATATATTTATTTTCTTT+GGG + chr8_1:49575186-49575205 Msa1198230:intron 10.0%
!! TATATGTTCTTTAAATATTA+TGG + chr8_1:49575790-49575809 Msa1198230:intron 10.0%
!!! TTTTATATTGATAAATGATT+TGG + chr8_1:49577058-49577077 Msa1198230:CDS 10.0%
!! TAAATGTGAAATATTGAATA+GGG + chr8_1:49573716-49573735 Msa1198230:CDS 15.0%
!! TTACAGAGATAAATAAATAA+AGG + chr8_1:49573859-49573878 Msa1198230:intron 15.0%
!! TACAGAGATAAATAAATAAA+GGG + chr8_1:49573860-49573879 Msa1198230:intron 15.0%
!! GAACAAATGATTAAATAAAA+TGG + chr8_1:49574263-49574282 Msa1198230:intron 15.0%
!!! TTTTAAGTTGAAATAACATA+AGG + chr8_1:49574737-49574756 Msa1198230:intron 15.0%
!! GAAAAAAATTAAAGTTGTAT+TGG + chr8_1:49575094-49575113 Msa1198230:intron 15.0%
!!! TCATTTTGAAACAATTTTTT+TGG + chr8_1:49575133-49575152 Msa1198230:intron 15.0%
!! TTATCTAAACTAAAAAAGAT+TGG + chr8_1:49575363-49575382 Msa1198230:intron 15.0%
!! TATCTAAACTAAAAAAGATT+GGG + chr8_1:49575364-49575383 Msa1198230:intron 15.0%
!!! TAATTTTAGATTTGGATTTT+CGG + chr8_1:49575387-49575406 Msa1198230:intron 15.0%
!! AAATTGAAGAATAATAAGAA+AGG + chr8_1:49575554-49575573 Msa1198230:intron 15.0%
!! TATTATGGAATGAATTTAAA+AGG + chr8_1:49575805-49575824 Msa1198230:intron 15.0%
!! ATTATGGAATGAATTTAAAA+GGG + chr8_1:49575806-49575825 Msa1198230:intron 15.0%
!!! TAGAATTTAATTTATCTACA+TGG - chr8_1:49576186-49576205 None:intergenic 15.0%
!! TCATAAAGAAAATCAAAATT+AGG + chr8_1:49576971-49576990 Msa1198230:intron 15.0%
!! TAAATGTGAAATATTGAATA+GGG + chr8_1:49573716-49573735 Msa1198230:CDS 15.0%
!! TTACAGAGATAAATAAATAA+AGG + chr8_1:49573859-49573878 Msa1198230:intron 15.0%
!! TACAGAGATAAATAAATAAA+GGG + chr8_1:49573860-49573879 Msa1198230:intron 15.0%
!! GAACAAATGATTAAATAAAA+TGG + chr8_1:49574263-49574282 Msa1198230:intron 15.0%
!!! TTTTAAGTTGAAATAACATA+AGG + chr8_1:49574737-49574756 Msa1198230:intron 15.0%
!! GAAAAAAATTAAAGTTGTAT+TGG + chr8_1:49575094-49575113 Msa1198230:intron 15.0%
!!! CATTTTGAAACAATTTTTTT+TGG + chr8_1:49575134-49575153 Msa1198230:intron 15.0%
!! TTATCTAAACTAAAAAAGAT+TGG + chr8_1:49575363-49575382 Msa1198230:intron 15.0%
!! TATCTAAACTAAAAAAGATT+GGG + chr8_1:49575364-49575383 Msa1198230:intron 15.0%
!!! TAATTTTAGATTTGGATTTT+CGG + chr8_1:49575387-49575406 Msa1198230:intron 15.0%
!! AAATTGAAGAATAATAAGAA+AGG + chr8_1:49575554-49575573 Msa1198230:intron 15.0%
!! TATTATGGAATGAATTTAAA+AGG + chr8_1:49575805-49575824 Msa1198230:intron 15.0%
!! ATTATGGAATGAATTTAAAA+GGG + chr8_1:49575806-49575825 Msa1198230:intron 15.0%
!!! TAGAATTTAATTTATCTACA+TGG - chr8_1:49576186-49576205 None:intergenic 15.0%
!! TCATAAAGAAAATCAAAATT+AGG + chr8_1:49576971-49576990 Msa1198230:intron 15.0%
!! TAAATGTGAAATATTGAATA+GGG + chr8_1:49573716-49573735 Msa1198230:CDS 15.0%
!! GTAAATGTGAAATATTGAAT+AGG + chr8_1:49573715-49573734 Msa1198230:CDS 20.0%
!! AAATAGAAGAGAAATAAGAA+AGG + chr8_1:49574435-49574454 Msa1198230:intron 20.0%
!! AATAGAAGAGAAATAAGAAA+GGG + chr8_1:49574436-49574455 Msa1198230:intron 20.0%
!!! TGTCTTTTTCTTATAAAGTT+GGG - chr8_1:49575007-49575026 None:intergenic 20.0%
!!! TTGTCTTTTTCTTATAAAGT+TGG - chr8_1:49575008-49575027 None:intergenic 20.0%
!!! AAAGTTGAAGTATTTATTGA+AGG + chr8_1:49575060-49575079 Msa1198230:intron 20.0%
!! ATTTAGTAAACCTTTATGTT+TGG + chr8_1:49575262-49575281 Msa1198230:intron 20.0%
!!! AAATCGAAATGAATTAGTTT+GGG - chr8_1:49575327-49575346 None:intergenic 20.0%
!! AAAATCGAAATGAATTAGTT+TGG - chr8_1:49575328-49575347 None:intergenic 20.0%
!!! AATTTTAGATTTGGATTTTC+GGG + chr8_1:49575388-49575407 Msa1198230:intron 20.0%
!! TTATGGAATGAATTTAAAAG+GGG + chr8_1:49575807-49575826 Msa1198230:intron 20.0%
!! AAGATTTCAAAATACTCTAT+AGG + chr8_1:49576061-49576080 Msa1198230:intron 20.0%
!!! ATAGGTTTTTAAGATTTGAA+AGG + chr8_1:49576079-49576098 Msa1198230:intron 20.0%
!! TTAAGATTTGAAAGGAAAAA+AGG + chr8_1:49576087-49576106 Msa1198230:intron 20.0%
!! TATTTGTAAACATATTCTCA+GGG - chr8_1:49576126-49576145 None:intergenic 20.0%
!! ATATTTGTAAACATATTCTC+AGG - chr8_1:49576127-49576146 None:intergenic 20.0%
!! TTTATATGACAAGATTTGAT+TGG + chr8_1:49576146-49576165 Msa1198230:intron 20.0%
!!! AGAAATTTATTTCTATGCAT+TGG + chr8_1:49576212-49576231 Msa1198230:intron 20.0%
!!! AGTTTCTTTTAAAACTAACT+CGG - chr8_1:49576369-49576388 None:intergenic 20.0%
!! AAAATCATATGAATTACATC+AGG + chr8_1:49576408-49576427 Msa1198230:intron 20.0%
!! ATGATTATTTAAGTAGAGAA+AGG + chr8_1:49576658-49576677 Msa1198230:intron 20.0%
!!! TATTCTTATTGCTTTATTAG+TGG + chr8_1:49576882-49576901 Msa1198230:intron 20.0%
!! GTAAATGTGAAATATTGAAT+AGG + chr8_1:49573715-49573734 Msa1198230:CDS 20.0%
!! AAATAGAAGAGAAATAAGAA+AGG + chr8_1:49574435-49574454 Msa1198230:intron 20.0%
!! AATAGAAGAGAAATAAGAAA+GGG + chr8_1:49574436-49574455 Msa1198230:intron 20.0%
!!! TGTCTTTTTCTTATAAAGTT+GGG - chr8_1:49575007-49575026 None:intergenic 20.0%
!!! TTGTCTTTTTCTTATAAAGT+TGG - chr8_1:49575008-49575027 None:intergenic 20.0%
!!! AAAGTTGAAGTATTTATTGA+AGG + chr8_1:49575060-49575079 Msa1198230:intron 20.0%
!! ATTTAGTAAACCTTTATGTT+TGG + chr8_1:49575262-49575281 Msa1198230:intron 20.0%
!!! AAATCGAAATGAATTAGTTT+GGG - chr8_1:49575327-49575346 None:intergenic 20.0%
!! AAAATCGAAATGAATTAGTT+TGG - chr8_1:49575328-49575347 None:intergenic 20.0%
!!! AATTTTAGATTTGGATTTTC+GGG + chr8_1:49575388-49575407 Msa1198230:intron 20.0%
!! TTATGGAATGAATTTAAAAG+GGG + chr8_1:49575807-49575826 Msa1198230:intron 20.0%
!! AAGATTTCAAAATACTCTAT+AGG + chr8_1:49576061-49576080 Msa1198230:intron 20.0%
!!! ATAGGTTTTTAAGATTTGAA+AGG + chr8_1:49576079-49576098 Msa1198230:intron 20.0%
!! TTAAGATTTGAAAGGAAAAA+AGG + chr8_1:49576087-49576106 Msa1198230:intron 20.0%
!! TATTTGTAAACATATTCTCA+GGG - chr8_1:49576126-49576145 None:intergenic 20.0%
!! ATATTTGTAAACATATTCTC+AGG - chr8_1:49576127-49576146 None:intergenic 20.0%
!! TTTATATGACAAGATTTGAT+TGG + chr8_1:49576146-49576165 Msa1198230:intron 20.0%
!!! AGAAATTTATTTCTATGCAT+TGG + chr8_1:49576212-49576231 Msa1198230:intron 20.0%
!!! AGTTTCTTTTAAAACTAACT+CGG - chr8_1:49576369-49576388 None:intergenic 20.0%
!! AAAATCATATGAATTACATC+AGG + chr8_1:49576408-49576427 Msa1198230:intron 20.0%
!! ATGATTATTTAAGTAGAGAA+AGG + chr8_1:49576658-49576677 Msa1198230:intron 20.0%
!!! TATTCTTATTGCTTTATTAG+TGG + chr8_1:49576882-49576901 Msa1198230:intron 20.0%
!! GTAAATGTGAAATATTGAAT+AGG + chr8_1:49573715-49573734 Msa1198230:CDS 20.0%
! AAAGTCACATACAAAATTAG+TGG + chr8_1:49574010-49574029 Msa1198230:intron 25.0%
! TTAGCAAATTAATTATGTGC+TGG - chr8_1:49574173-49574192 None:intergenic 25.0%
! ATCAATTTGCAAAACAAGAA+GGG - chr8_1:49574412-49574431 None:intergenic 25.0%
! AATCAATTTGCAAAACAAGA+AGG - chr8_1:49574413-49574432 None:intergenic 25.0%
!!! TTCTTGTTTTGCAAATTGAT+TGG + chr8_1:49574412-49574431 Msa1198230:intron 25.0%
!! AGATGGTTTGAATATTGTTT+TGG - chr8_1:49574513-49574532 None:intergenic 25.0%
!!! TATCATCGTTTTAGTTCATT+TGG - chr8_1:49574588-49574607 None:intergenic 25.0%
! TTAGCACACAAATTAAGAAA+TGG + chr8_1:49574941-49574960 Msa1198230:intron 25.0%
!! GTCTTTTTCTTATAAAGTTG+GGG - chr8_1:49575006-49575025 None:intergenic 25.0%
!! TGAAGTATTTATTGAAGGTA+AGG + chr8_1:49575065-49575084 Msa1198230:intron 25.0%
! TGTTAGTGAAATGTTGATAT+TGG + chr8_1:49575215-49575234 Msa1198230:intron 25.0%
!!! GATATTGGTTTAAGTCAAAT+TGG + chr8_1:49575230-49575249 Msa1198230:intron 25.0%
!! AGATTGGGTAATTTTAGATT+TGG + chr8_1:49575379-49575398 Msa1198230:intron 25.0%
! AGATAGATAGATAGATAGAT+AGG - chr8_1:49575664-49575683 None:intergenic 25.0%
!!! CACAATATTGAGTTTTGATA+CGG - chr8_1:49575947-49575966 None:intergenic 25.0%
! ATTTGTAAACATATTCTCAG+GGG - chr8_1:49576125-49576144 None:intergenic 25.0%
! ATTTAAGAGTAGCACATTAT+TGG - chr8_1:49576437-49576456 None:intergenic 25.0%
!! GCTACTCTTAAATATTTTGT+TGG + chr8_1:49576444-49576463 Msa1198230:intron 25.0%
!! ATTTTGTTGGAGTAAGATTA+AGG + chr8_1:49576457-49576476 Msa1198230:intron 25.0%
! CTTTCTCTTAATCTTACATT+GGG - chr8_1:49576630-49576649 None:intergenic 25.0%
! TCTTTCTCTTAATCTTACAT+TGG - chr8_1:49576631-49576650 None:intergenic 25.0%
! AATGTAAGATTAAGAGAAAG+AGG + chr8_1:49576630-49576649 Msa1198230:intron 25.0%
! ATGTAAGATTAAGAGAAAGA+GGG + chr8_1:49576631-49576650 Msa1198230:intron 25.0%
! GAATTGCATTGTACTAATAA+CGG - chr8_1:49576728-49576747 None:intergenic 25.0%
! AATTCAATGACATTCACAAT+AGG + chr8_1:49576743-49576762 Msa1198230:intron 25.0%
!! TTTCTTTTCATAGTGTAGTA+GGG + chr8_1:49576905-49576924 Msa1198230:intron 25.0%
! AAAGTCACATACAAAATTAG+TGG + chr8_1:49574010-49574029 Msa1198230:intron 25.0%
! ATCAATTTGCAAAACAAGAA+GGG - chr8_1:49574412-49574431 None:intergenic 25.0%
! AATCAATTTGCAAAACAAGA+AGG - chr8_1:49574413-49574432 None:intergenic 25.0%
!!! TTCTTGTTTTGCAAATTGAT+TGG + chr8_1:49574412-49574431 Msa1198230:intron 25.0%
!! AGATGGTTTGAATATTGTTT+TGG - chr8_1:49574513-49574532 None:intergenic 25.0%
!!! TATCATCGTTTTAGTTCATT+TGG - chr8_1:49574588-49574607 None:intergenic 25.0%
! TTAGCACACAAATTAAGAAA+TGG + chr8_1:49574941-49574960 Msa1198230:intron 25.0%
!! GTCTTTTTCTTATAAAGTTG+GGG - chr8_1:49575006-49575025 None:intergenic 25.0%
!! TGAAGTATTTATTGAAGGTA+AGG + chr8_1:49575065-49575084 Msa1198230:intron 25.0%
! TGTTAGTGAAATGTTGATAT+TGG + chr8_1:49575215-49575234 Msa1198230:intron 25.0%
!!! GATATTGGTTTAAGTCAAAT+TGG + chr8_1:49575230-49575249 Msa1198230:intron 25.0%
!! AGATTGGGTAATTTTAGATT+TGG + chr8_1:49575379-49575398 Msa1198230:intron 25.0%
! AGATAGATAGATAGATAGAT+AGG - chr8_1:49575664-49575683 None:intergenic 25.0%
!!! CACAATATTGAGTTTTGATA+CGG - chr8_1:49575947-49575966 None:intergenic 25.0%
! ATTTGTAAACATATTCTCAG+GGG - chr8_1:49576125-49576144 None:intergenic 25.0%
! ATTTAAGAGTAGCACATTAT+TGG - chr8_1:49576437-49576456 None:intergenic 25.0%
!! GCTACTCTTAAATATTTTGT+TGG + chr8_1:49576444-49576463 Msa1198230:intron 25.0%
!! ATTTTGTTGGAGTAAGATTA+AGG + chr8_1:49576457-49576476 Msa1198230:intron 25.0%
! CTTTCTCTTAATCTTACATT+GGG - chr8_1:49576630-49576649 None:intergenic 25.0%
! TCTTTCTCTTAATCTTACAT+TGG - chr8_1:49576631-49576650 None:intergenic 25.0%
! AATGTAAGATTAAGAGAAAG+AGG + chr8_1:49576630-49576649 Msa1198230:intron 25.0%
! ATGTAAGATTAAGAGAAAGA+GGG + chr8_1:49576631-49576650 Msa1198230:intron 25.0%
! GAATTGCATTGTACTAATAA+CGG - chr8_1:49576728-49576747 None:intergenic 25.0%
! AATTCAATGACATTCACAAT+AGG + chr8_1:49576743-49576762 Msa1198230:intron 25.0%
!! TTTCTTTTCATAGTGTAGTA+GGG + chr8_1:49576905-49576924 Msa1198230:intron 25.0%
TGAAGTGGAACATAGAAAAA+TGG + chr8_1:49573659-49573678 Msa1198230:CDS 30.0%
GTTTGTGTGAAGAATAATGT+TGG + chr8_1:49573690-49573709 Msa1198230:CDS 30.0%
TTCTTACCATCAACAAATCT+AGG + chr8_1:49573817-49573836 Msa1198230:intron 30.0%
AAATAAAGGGAAATGCTAAC+CGG + chr8_1:49573873-49573892 Msa1198230:intron 30.0%
! AAAATTAGTGGATCAAGTAG+AGG + chr8_1:49574022-49574041 Msa1198230:intron 30.0%
CGTAGTTCATATCTTTAGTT+CGG - chr8_1:49574101-49574120 None:intergenic 30.0%
CTAAAGATATGAACTACGTT+TGG + chr8_1:49574103-49574122 Msa1198230:intron 30.0%
! AGCTTGGACACTATTTTATA+CGG - chr8_1:49574129-49574148 None:intergenic 30.0%
TCAATTTGCAAAACAAGAAG+GGG - chr8_1:49574411-49574430 None:intergenic 30.0%
CAAATTGATGTACGTTTAGA+TGG - chr8_1:49574530-49574549 None:intergenic 30.0%
CATCTAAACGTACATCAATT+TGG + chr8_1:49574528-49574547 Msa1198230:intron 30.0%
GTATTTATTGAAGGTAAGGT+TGG + chr8_1:49575069-49575088 Msa1198230:intron 30.0%
!! AAGTGACACTCATTTTGAAA+CGG + chr8_1:49575159-49575178 Msa1198230:intron 30.0%
TACTGATGAACCAAACATAA+AGG - chr8_1:49575275-49575294 None:intergenic 30.0%
!! AATATTGAGTTTTGATACGG+TGG - chr8_1:49575944-49575963 None:intergenic 30.0%
!!! TTCTTTTAAAACTAACTCGG+AGG - chr8_1:49576366-49576385 None:intergenic 30.0%
ATTTAAGTAGAGAAAGGAGT+TGG + chr8_1:49576664-49576683 Msa1198230:intron 30.0%
TTTAAGTAGAGAAAGGAGTT+GGG + chr8_1:49576665-49576684 Msa1198230:intron 30.0%
!! TTGTACTAATAACGGACAAA+GGG - chr8_1:49576720-49576739 None:intergenic 30.0%
!! ATTGTACTAATAACGGACAA+AGG - chr8_1:49576721-49576740 None:intergenic 30.0%
TGACATTCACAATAGGTATA+TGG + chr8_1:49576750-49576769 Msa1198230:intron 30.0%
!! ATTAGTCTTTGCAAGATAGT+TGG + chr8_1:49576829-49576848 Msa1198230:intron 30.0%
! GTTTCTTTTCATAGTGTAGT+AGG + chr8_1:49576904-49576923 Msa1198230:intron 30.0%
ACTAAACAACCAACAATACT+TGG - chr8_1:49576943-49576962 None:intergenic 30.0%
! AGTATTGTTGGTTGTTTAGT+TGG + chr8_1:49576943-49576962 Msa1198230:intron 30.0%
! ATGATTTGGATACTATGAGT+AGG + chr8_1:49577072-49577091 Msa1198230:CDS 30.0%
TGAAGTGGAACATAGAAAAA+TGG + chr8_1:49573659-49573678 Msa1198230:CDS 30.0%
GTTTGTGTGAAGAATAATGT+TGG + chr8_1:49573690-49573709 Msa1198230:CDS 30.0%
TTCTTACCATCAACAAATCT+AGG + chr8_1:49573817-49573836 Msa1198230:intron 30.0%
AAATAAAGGGAAATGCTAAC+CGG + chr8_1:49573873-49573892 Msa1198230:intron 30.0%
! AAAATTAGTGGATCAAGTAG+AGG + chr8_1:49574022-49574041 Msa1198230:intron 30.0%
CGTAGTTCATATCTTTAGTT+CGG - chr8_1:49574101-49574120 None:intergenic 30.0%
CTAAAGATATGAACTACGTT+TGG + chr8_1:49574103-49574122 Msa1198230:intron 30.0%
! AGCTTGGACACTATTTTATA+CGG - chr8_1:49574129-49574148 None:intergenic 30.0%
TCAATTTGCAAAACAAGAAG+GGG - chr8_1:49574411-49574430 None:intergenic 30.0%
CAAATTGATGTACGTTTAGA+TGG - chr8_1:49574530-49574549 None:intergenic 30.0%
CATCTAAACGTACATCAATT+TGG + chr8_1:49574528-49574547 Msa1198230:intron 30.0%
GTATTTATTGAAGGTAAGGT+TGG + chr8_1:49575069-49575088 Msa1198230:intron 30.0%
!! AAGTGACACTCATTTTGAAA+CGG + chr8_1:49575159-49575178 Msa1198230:intron 30.0%
TACTGATGAACCAAACATAA+AGG - chr8_1:49575275-49575294 None:intergenic 30.0%
!! AATATTGAGTTTTGATACGG+TGG - chr8_1:49575944-49575963 None:intergenic 30.0%
!!! TTCTTTTAAAACTAACTCGG+AGG - chr8_1:49576366-49576385 None:intergenic 30.0%
ATTTAAGTAGAGAAAGGAGT+TGG + chr8_1:49576664-49576683 Msa1198230:intron 30.0%
TTTAAGTAGAGAAAGGAGTT+GGG + chr8_1:49576665-49576684 Msa1198230:intron 30.0%
!! TTGTACTAATAACGGACAAA+GGG - chr8_1:49576720-49576739 None:intergenic 30.0%
!! ATTGTACTAATAACGGACAA+AGG - chr8_1:49576721-49576740 None:intergenic 30.0%
TGACATTCACAATAGGTATA+TGG + chr8_1:49576750-49576769 Msa1198230:intron 30.0%
!! ATTAGTCTTTGCAAGAAAGT+TGG + chr8_1:49580274-49580293 Msa1198230:intron 30.0%
! GTTTCTTTTCATAGTGTAGT+AGG + chr8_1:49576904-49576923 Msa1198230:intron 30.0%
ACTAAACAACCAACAATACT+TGG - chr8_1:49576943-49576962 None:intergenic 30.0%
! AGTATTGTTGGTTGTTTAGT+TGG + chr8_1:49576943-49576962 Msa1198230:intron 30.0%
! ATGATTTGGATACTATGAGT+AGG + chr8_1:49577072-49577091 Msa1198230:CDS 30.0%
TGAAGTGGAACATAGAAAAA+TGG + chr8_1:49573659-49573678 Msa1198230:CDS 30.0%
GTTTGTGTGAAGAATAATGT+TGG + chr8_1:49573690-49573709 Msa1198230:CDS 30.0%
!!! AGATCAAGAGTCTAGCTTTT+TGG + chr8_1:49573755-49573774 Msa1198230:CDS 35.0%
!! AAGTCTCCTAGATTTGTTGA+TGG - chr8_1:49573826-49573845 None:intergenic 35.0%
CTACGTATATACCTCTTCTA+GGG - chr8_1:49573983-49574002 None:intergenic 35.0%
ACTACGTATATACCTCTTCT+AGG - chr8_1:49573984-49574003 None:intergenic 35.0%
AACAATCATCTCTTTCTCCA+CGG + chr8_1:49574361-49574380 Msa1198230:intron 35.0%
CAATTTGCAAAACAAGAAGG+GGG - chr8_1:49574410-49574429 None:intergenic 35.0%
AAACGACACTCATTGTGAAA+CGG - chr8_1:49574915-49574934 None:intergenic 35.0%
!! TTCACAATGAGTGTCGTTTA+AGG + chr8_1:49574916-49574935 Msa1198230:intron 35.0%
! TGTTTGGTTCATCAGTATAC+TGG + chr8_1:49575278-49575297 Msa1198230:intron 35.0%
!!! ATTTGGATTTTCGGGTTCAA+CGG + chr8_1:49575396-49575415 Msa1198230:intron 35.0%
TACAAAGCACAACTAGAGAT+GGG - chr8_1:49575525-49575544 None:intergenic 35.0%
ATACAAAGCACAACTAGAGA+TGG - chr8_1:49575526-49575545 None:intergenic 35.0%
! ATTTTGTAGTGCCTCATGTT+TGG + chr8_1:49575895-49575914 Msa1198230:intron 35.0%
ACAATCTATCTCCAAACATG+AGG - chr8_1:49575909-49575928 None:intergenic 35.0%
AGAAGAGATAGACACAAAGT+CGG + chr8_1:49576575-49576594 Msa1198230:intron 35.0%
! TGGGATTTGATGACTTTAAG+CGG - chr8_1:49576611-49576630 None:intergenic 35.0%
! ATTGCACTTGTTACATCACA+TGG + chr8_1:49576856-49576875 Msa1198230:intron 35.0%
TTTGGATACTATGAGTAGGA+TGG + chr8_1:49577076-49577095 Msa1198230:CDS 35.0%
!!! AGATCAAGAGTCTAGCTTTT+TGG + chr8_1:49573755-49573774 Msa1198230:CDS 35.0%
!! AAGTCTCCTAGATTTGTTGA+TGG - chr8_1:49573826-49573845 None:intergenic 35.0%
CTACGTATATACCTCTTCTA+GGG - chr8_1:49573983-49574002 None:intergenic 35.0%
ACTACGTATATACCTCTTCT+AGG - chr8_1:49573984-49574003 None:intergenic 35.0%
AACAATCATCTCTTTCTCCA+CGG + chr8_1:49574361-49574380 Msa1198230:intron 35.0%
CAATTTGCAAAACAAGAAGG+GGG - chr8_1:49574410-49574429 None:intergenic 35.0%
AAACGACACTCATTGTGAAA+CGG - chr8_1:49574915-49574934 None:intergenic 35.0%
!! TTCACAATGAGTGTCGTTTA+AGG + chr8_1:49574916-49574935 Msa1198230:intron 35.0%
! TGTTTGGTTCATCAGTATAC+TGG + chr8_1:49575278-49575297 Msa1198230:intron 35.0%
!!! ATTTGGATTTTCGGGTTCAA+CGG + chr8_1:49575396-49575415 Msa1198230:intron 35.0%
TACAAAGCACAACTAGAGAT+GGG - chr8_1:49575525-49575544 None:intergenic 35.0%
ATACAAAGCACAACTAGAGA+TGG - chr8_1:49575526-49575545 None:intergenic 35.0%
! ATTTTGTAGTGCCTCATGTT+TGG + chr8_1:49575895-49575914 Msa1198230:intron 35.0%
ACAATCTATCTCCAAACATG+AGG - chr8_1:49575909-49575928 None:intergenic 35.0%
AGAAGAGATAGACACAAAGT+CGG + chr8_1:49576575-49576594 Msa1198230:intron 35.0%
! TGGGATTTGATGACTTTAAG+CGG - chr8_1:49576611-49576630 None:intergenic 35.0%
! ATTGCACTTGTTACATCACA+TGG + chr8_1:49576856-49576875 Msa1198230:intron 35.0%
TTTGGATACTATGAGTAGGA+TGG + chr8_1:49577076-49577095 Msa1198230:CDS 35.0%
!!! AGATCAAGAGTCTAGCTTTT+TGG + chr8_1:49573755-49573774 Msa1198230:CDS 35.0%
GAAGAGGTTGAATGATGAAG+TGG + chr8_1:49573644-49573663 Msa1198230:CDS 40.0%
!!! GTCTAGCTTTTTGGATCAGT+TGG + chr8_1:49573764-49573783 Msa1198230:CDS 40.0%
TACTTCCTTAACCTGTACTC+CGG - chr8_1:49573902-49573921 None:intergenic 40.0%
!!! CTTGTTGAGCACTGCTTTTT+GGG + chr8_1:49574147-49574166 Msa1198230:intron 40.0%
! CTTGTGTCATTAGAGTGCAT+TGG + chr8_1:49574295-49574314 Msa1198230:intron 40.0%
CATTGGAAACATGTACCTCT+AGG + chr8_1:49574312-49574331 Msa1198230:intron 40.0%
TCGAACTAGTACATGCTTAG+CGG - chr8_1:49574475-49574494 None:intergenic 40.0%
! GACGTTCATCACCTTTAGAA+TGG + chr8_1:49575478-49575497 Msa1198230:intron 40.0%
ACAAAGCACAACTAGAGATG+GGG - chr8_1:49575524-49575543 None:intergenic 40.0%
ACACACACATTGCATGTTCT+TGG + chr8_1:49575765-49575784 Msa1198230:intron 40.0%
AGAAACGAGTCAAACTCGTT+AGG + chr8_1:49576260-49576279 Msa1198230:intron 40.0%
ACTAACTCGGAGGTTAAATG+AGG - chr8_1:49576356-49576375 None:intergenic 40.0%
AGTCTTTGCAAGATAGTTGG+AGG + chr8_1:49576832-49576851 Msa1198230:intron 40.0%
TCATAGTGTAGTAGGGTTAG+TGG + chr8_1:49576912-49576931 Msa1198230:intron 40.0%
AACTTGATGCTGCTGCAAAA+GGG + chr8_1:49577033-49577052 Msa1198230:CDS 40.0%
GAAGAGGTTGAATGATGAAG+TGG + chr8_1:49573644-49573663 Msa1198230:CDS 40.0%
!!! GTCTAGCTTTTTGGATCAGT+TGG + chr8_1:49573764-49573783 Msa1198230:CDS 40.0%
TACTTCCTTAACCTGTACTC+CGG - chr8_1:49573902-49573921 None:intergenic 40.0%
!!! CTTGTTGAGCACTGCTTTTT+GGG + chr8_1:49574147-49574166 Msa1198230:intron 40.0%
! CTTGTGTCATTAGAGTGCAT+TGG + chr8_1:49574295-49574314 Msa1198230:intron 40.0%
CATTGGAAACATGTACCTCT+AGG + chr8_1:49574312-49574331 Msa1198230:intron 40.0%
TCGAACTAGTACATGCTTAG+CGG - chr8_1:49574475-49574494 None:intergenic 40.0%
! GACGTTCATCACCTTTAGAA+TGG + chr8_1:49575478-49575497 Msa1198230:intron 40.0%
ACAAAGCACAACTAGAGATG+GGG - chr8_1:49575524-49575543 None:intergenic 40.0%
ACACACACATTGCATGTTCT+TGG + chr8_1:49575765-49575784 Msa1198230:intron 40.0%
AGAAACGAGTCAAACTCGTT+AGG + chr8_1:49576260-49576279 Msa1198230:intron 40.0%
ACTAACTCGGAGGTTAAATG+AGG - chr8_1:49576356-49576375 None:intergenic 40.0%
AGTCTTTGCAAGAAAGTTGG+AGG + chr8_1:49580277-49580296 Msa1198230:intron 40.0%
TCATAGTGTAGTAGGGTTAG+TGG + chr8_1:49576912-49576931 Msa1198230:intron 40.0%
AACTTGATGCTGCTGCAAAA+GGG + chr8_1:49577033-49577052 Msa1198230:CDS 40.0%
GAAGAGGTTGAATGATGAAG+TGG + chr8_1:49573644-49573663 Msa1198230:CDS 40.0%
!!! GTCTAGCTTTTTGGATCAGT+TGG + chr8_1:49573764-49573783 Msa1198230:CDS 40.0%
ACTTCCTTAACCTGTACTCC+GGG - chr8_1:49573901-49573920 None:intergenic 45.0%
GTTCTTCTAGACCCTAGAAG+AGG + chr8_1:49573969-49573988 Msa1198230:intron 45.0%
AAAGCAGTGCTCAACAAGCT+TGG - chr8_1:49574145-49574164 None:intergenic 45.0%
!! GCTTGTTGAGCACTGCTTTT+TGG + chr8_1:49574146-49574165 Msa1198230:intron 45.0%
AAAACAAGAAGGGGGTCACT+GGG - chr8_1:49574402-49574421 None:intergenic 45.0%
! TGAAGGCGCATCCATTCTAA+AGG - chr8_1:49575492-49575511 None:intergenic 45.0%
GCTCAGCACGCTTAAATATC+GGG - chr8_1:49576299-49576318 None:intergenic 45.0%
GGCTCAGCACGCTTAAATAT+CGG - chr8_1:49576300-49576319 None:intergenic 45.0%
ACTCGGAGGTTAAATGAGGT+GGG - chr8_1:49576352-49576371 None:intergenic 45.0%
AACTCGGAGGTTAAATGAGG+TGG - chr8_1:49576353-49576372 None:intergenic 45.0%
TAGAGAAAGGAGTTGGGTCA+TGG + chr8_1:49576671-49576690 Msa1198230:intron 45.0%
AGAGAAAGGAGTTGGGTCAT+GGG + chr8_1:49576672-49576691 Msa1198230:intron 45.0%
CAACTTGATGCTGCTGCAAA+AGG + chr8_1:49577032-49577051 Msa1198230:CDS 45.0%
ACTTGATGCTGCTGCAAAAG+GGG + chr8_1:49577034-49577053 Msa1198230:CDS 45.0%
CTATGAGTAGGATGGTGAAG+AGG + chr8_1:49577084-49577103 Msa1198230:CDS 45.0%
ACTTCCTTAACCTGTACTCC+GGG - chr8_1:49573901-49573920 None:intergenic 45.0%
GTTCTTCTAGACCCTAGAAG+AGG + chr8_1:49573969-49573988 Msa1198230:intron 45.0%
AAAGCAGTGCTCAACAAGCT+TGG - chr8_1:49574145-49574164 None:intergenic 45.0%
!! GCTTGTTGAGCACTGCTTTT+TGG + chr8_1:49574146-49574165 Msa1198230:intron 45.0%
AAAACAAGAAGGGGGTCACT+GGG - chr8_1:49574402-49574421 None:intergenic 45.0%
! TGAAGGCGCATCCATTCTAA+AGG - chr8_1:49575492-49575511 None:intergenic 45.0%
GCTCAGCACGCTTAAATATC+GGG - chr8_1:49576299-49576318 None:intergenic 45.0%
GGCTCAGCACGCTTAAATAT+CGG - chr8_1:49576300-49576319 None:intergenic 45.0%
ACTCGGAGGTTAAATGAGGT+GGG - chr8_1:49576352-49576371 None:intergenic 45.0%
AACTCGGAGGTTAAATGAGG+TGG - chr8_1:49576353-49576372 None:intergenic 45.0%
TAGAGAAAGGAGTTGGGTCA+TGG + chr8_1:49576671-49576690 Msa1198230:intron 45.0%
AGAGAAAGGAGTTGGGTCAT+GGG + chr8_1:49576672-49576691 Msa1198230:intron 45.0%
CAACTTGATGCTGCTGCAAA+AGG + chr8_1:49577032-49577051 Msa1198230:CDS 45.0%
ACTTGATGCTGCTGCAAAAG+GGG + chr8_1:49577034-49577053 Msa1198230:CDS 45.0%
CTATGAGTAGGATGGTGAAG+AGG + chr8_1:49577084-49577103 Msa1198230:CDS 45.0%
TGCACGACAACCATGGTTGA+CGG - chr8_1:49574338-49574357 None:intergenic 50.0%
TGTTGCATGCACGACAACCA+TGG - chr8_1:49574345-49574364 None:intergenic 50.0%
CAAAACAAGAAGGGGGTCAC+TGG - chr8_1:49574403-49574422 None:intergenic 50.0%
CGACACTCATTGTGAAACGG+AGG - chr8_1:49574912-49574931 None:intergenic 50.0%
TCTGAACCACTTACACGCCT+TGG + chr8_1:49575424-49575443 Msa1198230:intron 50.0%
GGTGATGAACGTCGTGTACA+CGG - chr8_1:49575471-49575490 None:intergenic 50.0%
AGATGGGGACGAGACATTGA+AGG - chr8_1:49575509-49575528 None:intergenic 50.0%
AGAAAGGACTAGAAGCCCGA+CGG + chr8_1:49575570-49575589 Msa1198230:intron 50.0%
TGACACACATGCAAGACCGT+CGG - chr8_1:49575589-49575608 None:intergenic 50.0%
TATTTAAGCGTGCTGAGCCG+AGG + chr8_1:49576301-49576320 Msa1198230:intron 50.0%
AGAGACCGAGCTCAAAACCT+CGG - chr8_1:49576321-49576340 None:intergenic 50.0%
! GTGGCTGCACCAAGTATTGT+TGG + chr8_1:49576931-49576950 Msa1198230:intron 50.0%
TGCACGACAACCATGGTTGA+CGG - chr8_1:49574338-49574357 None:intergenic 50.0%
TGTTGCATGCACGACAACCA+TGG - chr8_1:49574345-49574364 None:intergenic 50.0%
CAAAACAAGAAGGGGGTCAC+TGG - chr8_1:49574403-49574422 None:intergenic 50.0%
CGACACTCATTGTGAAACGG+AGG - chr8_1:49574912-49574931 None:intergenic 50.0%
TCTGAACCACTTACACGCCT+TGG + chr8_1:49575424-49575443 Msa1198230:intron 50.0%
GGTGATGAACGTCGTGTACA+CGG - chr8_1:49575471-49575490 None:intergenic 50.0%
AGATGGGGACGAGACATTGA+AGG - chr8_1:49575509-49575528 None:intergenic 50.0%
AGAAAGGACTAGAAGCCCGA+CGG + chr8_1:49575570-49575589 Msa1198230:intron 50.0%
TGACACACATGCAAGACCGT+CGG - chr8_1:49575589-49575608 None:intergenic 50.0%
TATTTAAGCGTGCTGAGCCG+AGG + chr8_1:49576301-49576320 Msa1198230:intron 50.0%
AGAGACCGAGCTCAAAACCT+CGG - chr8_1:49576321-49576340 None:intergenic 50.0%
! GTGGCTGCACCAAGTATTGT+TGG + chr8_1:49576931-49576950 Msa1198230:intron 50.0%
TTAACCTGTACTCCGGGCAC+CGG - chr8_1:49573895-49573914 None:intergenic 55.0%
TACCTCTAGGCCGTCAACCA+TGG + chr8_1:49574325-49574344 Msa1198230:intron 55.0%
AACCATGGTTGACGGCCTAG+AGG - chr8_1:49574330-49574349 None:intergenic 55.0%
!! GGACAAGGAAGGTGTTACCG+TGG - chr8_1:49574381-49574400 None:intergenic 55.0%
CTAGTACATGCTTAGCGGCG+CGG - chr8_1:49574470-49574489 None:intergenic 55.0%
GACACACATGCAAGACCGTC+GGG - chr8_1:49575588-49575607 None:intergenic 55.0%
!!! CTGAGCCGAGGTTTTGAGCT+CGG + chr8_1:49576313-49576332 Msa1198230:intron 55.0%
TTAACCTGTACTCCGGGCAC+CGG - chr8_1:49573895-49573914 None:intergenic 55.0%
TACCTCTAGGCCGTCAACCA+TGG + chr8_1:49574325-49574344 Msa1198230:intron 55.0%
AACCATGGTTGACGGCCTAG+AGG - chr8_1:49574330-49574349 None:intergenic 55.0%
!! GGACAAGGAAGGTGTTACCG+TGG - chr8_1:49574381-49574400 None:intergenic 55.0%
TAGTACATGCTTAGCGGCGC+GGG - chr8_1:49574469-49574488 None:intergenic 55.0%
CTAGTACATGCTTAGCGGCG+CGG - chr8_1:49574470-49574489 None:intergenic 55.0%
GACACACATGCAAGACCGTC+GGG - chr8_1:49575588-49575607 None:intergenic 55.0%
!!! CTGAGCCGAGGTTTTGAGCT+CGG + chr8_1:49576313-49576332 Msa1198230:intron 55.0%
GGGAAATGCTAACCGGTGCC+CGG + chr8_1:49573880-49573899 Msa1198230:intron 60.0%
GGTGCCCGGAGTACAGGTTA+AGG + chr8_1:49573894-49573913 Msa1198230:intron 60.0%
AGAAGGGGGTCACTGGGACA+AGG - chr8_1:49574396-49574415 None:intergenic 60.0%
TACACGGCTCCCGTGATCCA+TGG - chr8_1:49575455-49575474 None:intergenic 60.0%
GGGAAATGCTAACCGGTGCC+CGG + chr8_1:49573880-49573899 Msa1198230:intron 60.0%
GGTGCCCGGAGTACAGGTTA+AGG + chr8_1:49573894-49573913 Msa1198230:intron 60.0%
AGAAGGGGGTCACTGGGACA+AGG - chr8_1:49574396-49574415 None:intergenic 60.0%
TACACGGCTCCCGTGATCCA+TGG - chr8_1:49575455-49575474 None:intergenic 60.0%
CTAACCGGTGCCCGGAGTAC+AGG + chr8_1:49573888-49573907 Msa1198230:intron 65.0%
GGGGGTCACTGGGACAAGGA+AGG - chr8_1:49574392-49574411 None:intergenic 65.0%
CTTGGCGCCGCCATGGATCA+CGG + chr8_1:49575442-49575461 Msa1198230:intron 65.0%
TTGGCGCCGCCATGGATCAC+GGG + chr8_1:49575443-49575462 Msa1198230:intron 65.0%
ACGGCTCCCGTGATCCATGG+CGG - chr8_1:49575452-49575471 None:intergenic 65.0%
CTAACCGGTGCCCGGAGTAC+AGG + chr8_1:49573888-49573907 Msa1198230:intron 65.0%
GGGGGTCACTGGGACAAGGA+AGG - chr8_1:49574392-49574411 None:intergenic 65.0%
CTTGGCGCCGCCATGGATCA+CGG + chr8_1:49575442-49575461 Msa1198230:intron 65.0%
TTGGCGCCGCCATGGATCAC+GGG + chr8_1:49575443-49575462 Msa1198230:intron 65.0%
ACGGCTCCCGTGATCCATGG+CGG - chr8_1:49575452-49575471 None:intergenic 65.0%
GCGGCGCCAAGGCGTGTAAG+TGG - chr8_1:49575433-49575452 None:intergenic 70.0%
TACACGCCTTGGCGCCGCCA+TGG + chr8_1:49575435-49575454 Msa1198230:intron 70.0%
CGTGATCCATGGCGGCGCCA+AGG - chr8_1:49575444-49575463 None:intergenic 70.0%
GCGGCGCCAAGGCGTGTAAG+TGG - chr8_1:49575433-49575452 None:intergenic 70.0%
TACACGCCTTGGCGCCGCCA+TGG + chr8_1:49575435-49575454 Msa1198230:intron 70.0%
CGTGATCCATGGCGGCGCCA+AGG - chr8_1:49575444-49575463 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 49573630 49580704 49573630 ID=Msa1198230;Name=Msa1198230
chr8_1 mRNA 49573630 49580704 49573630 ID=Msa1198230-mRNA-1;Parent=Msa1198230;Name=Msa1198230-mRNA-1;_AED=0.40;_eAED=0.40;_QI=0|0|0|1|0|0|3|0|218
chr8_1 exon 49573630 49573803 49573630 ID=Msa1198230-mRNA-1:exon:15554;Parent=Msa1198230-mRNA-1
chr8_1 exon 49577020 49577259 49577020 ID=Msa1198230-mRNA-1:exon:15555;Parent=Msa1198230-mRNA-1
chr8_1 exon 49580465 49580704 49580465 ID=Msa1198230-mRNA-1:exon:15556;Parent=Msa1198230-mRNA-1
chr8_1 CDS 49573630 49573803 49573630 ID=Msa1198230-mRNA-1:cds;Parent=Msa1198230-mRNA-1
chr8_1 CDS 49577020 49577259 49577020 ID=Msa1198230-mRNA-1:cds;Parent=Msa1198230-mRNA-1
chr8_1 CDS 49580465 49580704 49580465 ID=Msa1198230-mRNA-1:cds;Parent=Msa1198230-mRNA-1
Gene Sequence

>Msa1198230

ATGAGTAGGATGGTGAAGAGGTTGAATGATGAAGTGGAACATAGAAAAATGGTTGCTGATGTTTGTGTGAAGAATAATGTTGGTAGTAAATGTGAAATATTGAATAGGGTTATGAGTGAATATAGAGATCAAGAGTCTAGCTTTTTGGATCAGTTGGAAGAGCTTGAAGAACATACTATGTGTGAACAACTTGATGCTGCTGCAAAAGGGGTTTTTATATTGATAAATGATTTGGATACTATGAGTAGGATGGTGAAGAGGTTGAATGATGAAGTGGAACATAGAAAAATGGTTGCTGATGTTTGTGTGAAGAATAATGTTGGCAGTAAATGTGAAATATTGAATAGGGTTATGAGTGAATATAGAGATCAAGAGTCTAGCTTTTTGGATCAGTTGGAAGAGCTTGAAGAACATACTATGTGTGAACAACTTGATGCTGCTGCAAAAGGGGTTTTTATATTGATAAATGATTTGGATACTATGAGTAGGATGGTGAAGAGGTTGAATGATGAAGTGGAACATAGAAAAATGGTTGCTGATGTTTGTGTGAAGAATAATGTTGGCAGTAAATGTGAAATATTGAATAGGGTTATGAGTGAATATAGAGATCAAGAGTCTAGCTTTTTGGATCAGTTGGAAGAGCTTGAAGAACAT

Protein sequence

>Msa1198230

MSRMVKRLNDEVEHRKMVADVCVKNNVGSKCEILNRVMSEYRDQESSFLDQLEELEEHTMCEQLDAAAKGVFILINDLDTMSRMVKRLNDEVEHRKMVADVCVKNNVGSKCEILNRVMSEYRDQESSFLDQLEELEEHTMCEQLDAAAKGVFILINDLDTMSRMVKRLNDEVEHRKMVADVCVKNNVGSKCEILNRVMSEYRDQESSFLDQLEELEEH