AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1199660

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1199660 MtrunA17_Chr8g0369211 70.760 171 26 1 128 274 211 381 8.52e-70 231
Msa1199660 MtrunA17_Chr8g0369221 49.029 206 69 4 39 211 116 318 2.01e-43 150
Msa1199660 MtrunA17_Chr2g0291501 51.562 128 62 0 139 266 246 373 2.14e-34 131
Msa1199660 MtrunA17_Chr2g0283111 38.406 138 59 2 139 274 248 361 3.67e-20 90.1
Msa1199660 MtrunA17_Chr2g0283061 37.162 148 71 2 127 274 183 308 5.96e-19 86.3
Msa1199660 MtrunA17_Chr4g0075441 60.606 66 14 2 68 131 1 56 1.76e-13 65.1
Msa1199660 MtrunA17_Chr4g0058861 38.636 132 78 3 139 268 248 378 1.36e-12 67.8
Msa1199660 MtrunA17_Chr5g0432871 32.639 144 77 5 139 270 229 364 1.78e-12 67.4
Msa1199660 MtrunA17_Chr1g0189871 34.586 133 85 2 136 267 458 589 2.68e-12 67.0
Msa1199660 MtrunA17_Chr5g0404961 36.620 142 81 3 136 274 152 287 3.78e-12 65.9
Msa1199660 MtrunA17_Chr2g0296591 35.455 110 69 2 138 246 601 709 4.33e-12 66.2
Msa1199660 MtrunA17_Chr2g0296601 35.455 110 69 2 138 246 601 709 4.85e-12 66.2
Msa1199660 MtrunA17_Chr1g0183231 29.851 134 92 2 136 268 406 538 7.58e-12 65.5
Msa1199660 MtrunA17_Chr4g0009791 35.537 121 75 3 127 246 41 159 9.33e-12 62.4
Msa1199660 MtrunA17_Chr8g0387791 38.889 108 63 2 139 246 92 196 9.55e-12 65.1
Msa1199660 MtrunA17_Chr1g0212351 32.836 134 88 2 135 267 161 293 2.08e-11 63.9
Msa1199660 MtrunA17_Chr4g0058761 32.836 134 88 2 136 268 457 589 2.09e-11 64.3
Msa1199660 MtrunA17_Chr4g0019801 30.178 169 85 3 139 274 316 484 2.93e-11 63.5
Msa1199660 MtrunA17_Chr3g0120441 33.824 136 86 4 133 267 73 205 3.32e-11 63.2
Msa1199660 MtrunA17_Chr7g0219371 35.099 151 95 3 124 272 242 391 4.17e-11 63.2
Msa1199660 MtrunA17_Chr5g0446871 33.846 130 84 2 139 267 336 464 4.32e-11 63.2
Msa1199660 MtrunA17_Chr7g0215681 31.818 132 88 2 136 266 135 265 7.13e-11 62.4
Msa1199660 MtrunA17_Chr4g0014151 33.051 118 77 2 130 246 399 515 8.13e-11 62.4
Msa1199660 MtrunA17_Chr4g0032101 32.298 161 100 4 115 267 294 453 9.63e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1199660 AT1G79620.3 59.412 170 45 1 128 273 219 388 8.11e-60 202
Msa1199660 AT1G79620.4 59.412 170 45 1 128 273 219 388 1.10e-59 201
Msa1199660 AT1G79620.2 59.412 170 45 1 128 273 219 388 1.43e-59 202
Msa1199660 AT1G79620.1 59.412 170 45 1 128 273 219 388 2.33e-59 203
Msa1199660 AT1G79620.5 59.412 170 45 1 128 273 219 388 2.95e-59 203
Msa1199660 AT5G49770.1 40.854 164 73 1 128 267 215 378 4.93e-29 116
Msa1199660 AT5G49760.1 42.073 164 71 1 128 267 212 375 6.85e-25 104
Msa1199660 AT5G49750.1 33.929 168 87 1 124 267 265 432 3.40e-22 95.9
Msa1199660 AT5G49780.1 44.776 134 73 1 135 267 122 255 3.95e-20 90.5
Msa1199660 AT5G49780.3 44.776 134 73 1 135 267 243 376 4.96e-20 90.1
Msa1199660 AT5G49780.2 44.776 134 73 1 135 267 243 376 5.42e-20 90.1
Msa1199660 AT1G06840.1 32.192 146 81 4 136 270 229 367 2.59e-12 67.4
Msa1199660 AT5G48940.1 32.331 133 88 2 136 267 469 600 6.71e-12 66.2
Msa1199660 AT5G14210.1 31.081 148 82 1 139 266 194 341 6.98e-12 65.9
Msa1199660 AT5G14210.2 31.081 148 82 1 139 266 194 341 7.12e-12 65.9
Msa1199660 AT5G14210.3 31.081 148 82 1 139 266 194 341 7.84e-12 65.9
Msa1199660 AT1G75640.1 34.058 138 87 2 139 273 121 257 1.21e-11 65.5
Msa1199660 AT3G24240.1 33.083 133 87 2 136 267 468 599 1.39e-11 65.1
Msa1199660 AT2G26330.1 31.884 138 92 2 136 272 333 469 1.42e-11 65.1
Msa1199660 AT1G64210.1 38.532 109 63 3 139 246 93 198 2.30e-11 64.3
Msa1199660 AT5G25910.1 31.818 132 89 1 136 267 237 367 2.95e-11 63.9
Msa1199660 AT5G40170.1 33.846 130 60 2 139 267 144 248 5.95e-11 63.2
Msa1199660 AT5G65700.1 29.851 134 92 2 136 268 409 541 6.41e-11 63.2
Msa1199660 AT5G65700.2 29.851 134 92 2 136 268 409 541 6.41e-11 63.2
Msa1199660 AT5G63930.2 31.343 134 90 2 136 268 395 527 7.55e-11 62.8
Msa1199660 AT5G63930.1 31.343 134 90 2 136 268 459 591 7.71e-11 62.8

Find 325 sgRNAs with CRISPR-Local

Find 522 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATGCCTTGTTGCAATTTA+AGG 0.066892 8_1:+51888853 None:intergenic
AATTCTAAATCTATAGTTTA+TGG 0.086007 8_1:-51886417 Msa1199660:five_prime_UTR
ACTTCACTGTTTCAGGATTT+TGG 0.119017 8_1:-51891236 Msa1199660:intron
GCGTCCTCGCATGTTGTTTC+TGG 0.119405 8_1:-51887189 Msa1199660:five_prime_UTR
CAATTCAAACCGAATAAATT+TGG 0.138275 8_1:+51889844 None:intergenic
TTGGATGGAGAGGGCGATTT+TGG 0.146812 8_1:-51886656 Msa1199660:five_prime_UTR
CACATCTTATTGAATTATTC+AGG 0.157540 8_1:-51890576 Msa1199660:five_prime_UTR
ACCCATTAAACCTTTATTAA+AGG 0.167669 8_1:+51891382 None:intergenic
GTCCTTTAATAAAGGTTTAA+TGG 0.184785 8_1:-51891384 Msa1199660:five_prime_UTR
GGAAACTCTCCAAACTTTAT+TGG 0.187337 8_1:-51890507 Msa1199660:five_prime_UTR
CCGATTTCACCTCCTGAAAT+TGG 0.198819 8_1:-51889260 Msa1199660:five_prime_UTR
TCCATGATCTATTAGTATTA+TGG 0.199456 8_1:-51883624 Msa1199660:intron
GGATTGGATTGGTTCGGTTT+TGG 0.213526 8_1:-51889962 Msa1199660:five_prime_UTR
CTAAGCACTTGTGAGTATTT+TGG 0.215999 8_1:-51890402 Msa1199660:five_prime_UTR
AATTTCACTGAGAACAAAAT+TGG 0.222803 8_1:-51886931 Msa1199660:five_prime_UTR
CACTTTAAACTTCACATCTT+TGG 0.229250 8_1:+51885124 None:intergenic
CTGCTGTGGCTTGCTGGTTT+TGG 0.230069 8_1:+51887743 None:intergenic
CAGACTGAAACCCTGCAAAT+TGG 0.232924 8_1:-51886626 Msa1199660:five_prime_UTR
ATTCACTTGAAAAGAGCTTA+TGG 0.252207 8_1:-51888179 Msa1199660:five_prime_UTR
TGACACTTTGACTGAGTTAA+AGG 0.260060 8_1:-51888818 Msa1199660:five_prime_UTR
ATCCATCAAAAGCTCCAATT+TGG 0.262634 8_1:-51883755 Msa1199660:CDS
AAAACACACTCAAGATTATA+AGG 0.268242 8_1:-51889993 Msa1199660:five_prime_UTR
GAGTAGTTAGCTTGTTAGTT+AGG 0.270116 8_1:+51890164 None:intergenic
ACAAGTGCTTAGCCTTTAAA+AGG 0.271696 8_1:+51890413 None:intergenic
CTCTTGAGGTTATATAGTTT+TGG 0.272078 8_1:+51887686 None:intergenic
TATAAATTGTTTCATGTGAT+TGG 0.283449 8_1:+51888409 None:intergenic
TTTAAAACATCATGAAATTA+TGG 0.285251 8_1:+51886334 None:intergenic
CAAATTTATTCGGTTTGAAT+TGG 0.285306 8_1:-51889843 Msa1199660:five_prime_UTR
TAGTGTCTGCTGTGGCTTGC+TGG 0.287647 8_1:+51887737 None:intergenic
CACACTTTCAAGGAACAAAA+TGG 0.291149 8_1:+51890131 None:intergenic
ACCTGAGTTGCTGTGCATTT+TGG 0.291499 8_1:-51888546 Msa1199660:five_prime_UTR
TCTATTAGTATTATGGAGTT+TGG 0.294515 8_1:-51883617 Msa1199660:intron
ATCTTTGATACGCCGATTAT+CGG 0.298722 8_1:-51886808 Msa1199660:five_prime_UTR
GTTTGAATTGGATTGGATTT+CGG 0.302900 8_1:-51889831 Msa1199660:five_prime_UTR
TCCTTTAATAAAGGTTTAAT+GGG 0.314806 8_1:-51891383 Msa1199660:five_prime_UTR
CCAATTTCAGGAGGTGAAAT+CGG 0.315645 8_1:+51889260 None:intergenic
CCTGACGATTTGCAATGATT+TGG 0.317399 8_1:+51885585 None:intergenic
AAGTACAACATTCCTTGATA+TGG 0.318099 8_1:+51888246 None:intergenic
GATAAAGTTGAAAACCAAAT+TGG 0.319561 8_1:+51883741 None:intergenic
GAAAGATCCCCTAATGTATC+TGG 0.319805 8_1:+51891187 None:intergenic
TAATTGGGGTTCATCTAGTT+TGG 0.322079 8_1:-51886382 Msa1199660:five_prime_UTR
GCAATATTCCAGATACATTA+GGG 0.323311 8_1:-51891195 Msa1199660:five_prime_UTR
AATATTGCTGAACCAATTTC+AGG 0.323671 8_1:+51889248 None:intergenic
CACGACCTATATTATATATA+TGG 0.324722 8_1:-51886591 Msa1199660:five_prime_UTR
AGACTGAAACCCTGCAAATT+GGG 0.329444 8_1:-51886625 Msa1199660:five_prime_UTR
CAAGGAATGTTGTACTTTAG+AGG 0.329662 8_1:-51888240 Msa1199660:five_prime_UTR
AGGGATTTGTCCTTTAATAA+AGG 0.331632 8_1:-51891392 Msa1199660:five_prime_UTR
GATCGGTTTATGCTAAGAAT+TGG 0.331666 8_1:-51889472 Msa1199660:five_prime_UTR
ACTAAGTACCTACTCCGTTT+TGG 0.335374 8_1:-51885787 Msa1199660:five_prime_UTR
GAAATCAGTTACATGATAAA+AGG 0.335928 8_1:+51890188 None:intergenic
ATCCCATGAGCAGCAGTCTA+TGG 0.340503 8_1:-51888948 Msa1199660:five_prime_UTR
TGATCCAATCCAAATTTATT+CGG 0.340666 8_1:-51889853 Msa1199660:five_prime_UTR
TGACATGATATATGAAGTTT+AGG 0.345029 8_1:-51887298 Msa1199660:five_prime_UTR
TATATTGCTGAAGGTTGAAT+AGG 0.348191 8_1:+51888320 None:intergenic
TGAATAGACATTGAGTGATA+TGG 0.353375 8_1:-51885261 Msa1199660:intron
GGCAATATTCCAGATACATT+AGG 0.356342 8_1:-51891196 Msa1199660:five_prime_UTR
GCGAACCATCGTCTCCAATC+TGG 0.357900 8_1:+51887004 None:intergenic
TGGAATTATGCTTCTGAGAC+TGG 0.361170 8_1:-51889307 Msa1199660:five_prime_UTR
GAGTCAAAACCCCAATTTGC+AGG 0.361609 8_1:+51886615 None:intergenic
TTCACAGGAAGCTTTGCTTT+TGG 0.362772 8_1:+51885199 None:intergenic
CGATGAAACCTTCATCGGTT+TGG 0.366778 8_1:+51885889 None:intergenic
TGGAATTTCTCCGAAAAGTT+TGG 0.367995 8_1:-51889177 Msa1199660:five_prime_UTR
AGTCCAATCCAATGCACTTT+CGG 0.371308 8_1:+51888445 None:intergenic
AAAGGAGGGTTCAAGGGTAG+AGG 0.371346 8_1:+51890206 None:intergenic
TGGCCGTTGCAATTTGAGTC+AGG 0.371578 8_1:-51887169 Msa1199660:five_prime_UTR
ATCGTCTAAAAGTGTACTTC+AGG 0.373518 8_1:+51888477 None:intergenic
GTGTCTTTGGTTAGTTGGTT+TGG 0.374539 8_1:-51890048 Msa1199660:five_prime_UTR
GGGGTTGTGGAGGTTGAGAC+TGG 0.375313 8_1:+51890448 None:intergenic
CGGTTTGGTTCGGTTTGGAT+TGG 0.376882 8_1:+51885962 None:intergenic
AAGGTTGAATAGGGATATTT+AGG 0.377694 8_1:+51888330 None:intergenic
GGGTTCTATCTCTCCACAAT+TGG 0.381879 8_1:-51891363 Msa1199660:five_prime_UTR
AGGAGGGTTCAAGGGTAGAG+GGG 0.392304 8_1:+51890208 None:intergenic
GCATTCCAAGATGAAATTCT+AGG 0.392793 8_1:-51888923 Msa1199660:five_prime_UTR
AGGGGTGTAACGGTTCGGTT+TGG 0.396013 8_1:+51885836 None:intergenic
TTCACTTGAAAAGAGCTTAT+GGG 0.397757 8_1:-51888178 Msa1199660:five_prime_UTR
GTTGCTTGTGATCCTTTAGA+AGG 0.397805 8_1:+51887630 None:intergenic
CAAGTCCAACCAATAAAGTT+TGG 0.398001 8_1:+51890498 None:intergenic
AGAAACCGAACCAAACTTAT+CGG 0.398755 8_1:+51885942 None:intergenic
TGGTGGTTGGATCGATCATT+TGG 0.399953 8_1:+51886980 None:intergenic
CTTATCGGTTTGGTTCGGTT+TGG 0.402641 8_1:+51885957 None:intergenic
ATTACTCTCAAATTCCATCT+AGG 0.402833 8_1:+51889112 None:intergenic
TTAAATTCAAACAACTTCAC+TGG 0.402854 8_1:-51890550 Msa1199660:five_prime_UTR
GTTCTAGTAGTTGGAGGAAC+AGG 0.402907 8_1:-51888069 Msa1199660:five_prime_UTR
ATAAATATTTCAGTTGGGAT+TGG 0.403753 8_1:-51889494 Msa1199660:five_prime_UTR
CTTAGTAGCAGCCAGCTCTA+TGG 0.405459 8_1:+51889016 None:intergenic
AAACCTTCATCGGTTTGGTT+TGG 0.406917 8_1:+51885894 None:intergenic
CCGAACCAAACCGATAAGTT+TGG 0.406995 8_1:-51885952 Msa1199660:five_prime_UTR
CTAAGGTTGCTGAGATTTGA+AGG 0.408251 8_1:+51884475 None:intergenic
CATTGGATGAGGAATCTTCC+AGG 0.408974 8_1:+51887099 None:intergenic
TGCTACAATTCGTTGTTGCC+TGG 0.410074 8_1:-51887117 Msa1199660:five_prime_UTR
CCGAACCAAACTTATCGGTT+TGG 0.410697 8_1:+51885947 None:intergenic
AATGTCAATGCCGTGTGATT+TGG 0.411124 8_1:+51888624 None:intergenic
CTGTTGCTTAATTCAGTATG+AGG 0.411892 8_1:+51888353 None:intergenic
ATGTATATAACTGTTGGTAT+AGG 0.413413 8_1:+51887554 None:intergenic
AAGAGCAAGGTTCTAGTAGT+TGG 0.416579 8_1:-51888078 Msa1199660:five_prime_UTR
ACTTACACTTGCTGTATTTG+AGG 0.416814 8_1:+51883554 None:intergenic
CTATATAGATAGATAGATAT+AGG 0.417635 8_1:+51887924 None:intergenic
TCGACAAAGATCCCGATAAT+CGG 0.419327 8_1:+51886796 None:intergenic
GACACTTTGACTGAGTTAAA+GGG 0.421335 8_1:-51888817 Msa1199660:five_prime_UTR
AACATCACCTCACACTTTCA+AGG 0.421673 8_1:+51890121 None:intergenic
GATAGATATAGGAATCTTCA+TGG 0.422261 8_1:+51887935 None:intergenic
TATGCTAAGAATTGGACTTT+CGG 0.423718 8_1:-51889464 Msa1199660:five_prime_UTR
AAATAATATTTCTTCAAAGA+AGG 0.423735 8_1:-51889615 Msa1199660:five_prime_UTR
TTCCACATTACATTACAATT+CGG 0.424523 8_1:+51887335 None:intergenic
CAAACGTGTCTTTGGTTAGT+TGG 0.424702 8_1:-51890053 Msa1199660:five_prime_UTR
GTTATCCTAGAATTTCATCT+TGG 0.426723 8_1:+51888918 None:intergenic
TTCATCGGTTTGGTTTGGTT+CGG 0.430736 8_1:+51885899 None:intergenic
CTTTAGAAGGAGGAGTGAAT+TGG 0.430885 8_1:+51887643 None:intergenic
CAAACCGAATAAATTTGGAT+TGG 0.432110 8_1:+51889849 None:intergenic
CGAAGGTTACTGATGAAATC+TGG 0.433096 8_1:+51883365 None:intergenic
GTTGATAAATGATGCATGTA+TGG 0.433923 8_1:-51886222 Msa1199660:five_prime_UTR
AATAACAAAACCGAAGAGAT+TGG 0.434271 8_1:+51889921 None:intergenic
TTAGCACACAACAGTTTGTC+AGG 0.435453 8_1:-51884347 Msa1199660:CDS
TCAAGTATAAATATTTCAGT+TGG 0.435662 8_1:-51889500 Msa1199660:five_prime_UTR
TGGTCTTTCGTTAGTCAGTT+CGG 0.436018 8_1:-51890028 Msa1199660:five_prime_UTR
TCCGGCATAGGCGTAGGTTC+TGG 0.441152 8_1:-51885173 Msa1199660:CDS
AAAACGGAGTAGGTACTTAG+TGG 0.443346 8_1:+51885789 None:intergenic
GATAATCGGCGTATCAAAGA+TGG 0.443540 8_1:+51886810 None:intergenic
TCTTTGATACGCCGATTATC+GGG 0.444431 8_1:-51886807 Msa1199660:five_prime_UTR
TTTGGATTGGTTCGGCTGAT+CGG 0.444836 8_1:+51885975 None:intergenic
ATGGAGTTTGGAGCACTTGA+AGG 0.445231 8_1:-51883605 Msa1199660:CDS
TGTAACGGTTCGGTTTGGAT+TGG 0.445265 8_1:+51885841 None:intergenic
AATGATGGATGAATGAATCT+TGG 0.446412 8_1:-51886152 Msa1199660:five_prime_UTR
TCCAACTGTTGTTACTTCAA+TGG 0.448105 8_1:+51886674 None:intergenic
CATGATAAAAGGAGGGTTCA+AGG 0.448202 8_1:+51890199 None:intergenic
TTGTCCTCAGTTGAAGCTTG+TGG 0.449291 8_1:-51883401 Msa1199660:CDS
TTTGCCAGACTTAACATCAA+TGG 0.449960 8_1:-51884321 Msa1199660:CDS
CCGAAAAGTTTGGTACAAGA+AGG 0.450979 8_1:-51889167 Msa1199660:five_prime_UTR
TTATTCGGTTTGAATTGGAT+TGG 0.451948 8_1:-51889838 Msa1199660:five_prime_UTR
TTGTTTCATGTGATTGGCTA+GGG 0.451980 8_1:+51888415 None:intergenic
CTGCAAGATCAAGAACTTGA+AGG 0.452017 8_1:-51889077 Msa1199660:five_prime_UTR
TTTCGTCAAGCTGGTGCGTA+GGG 0.452804 8_1:+51885817 None:intergenic
CTTTCGTCAAGCTGGTGCGT+AGG 0.453875 8_1:+51885816 None:intergenic
TTATCCATTGATGTTAAGTC+TGG 0.455056 8_1:+51884317 None:intergenic
AATTACCATATATATAATAT+AGG 0.455459 8_1:+51886586 None:intergenic
GTGGTTTGCTTTCGTCAAGC+TGG 0.455675 8_1:+51885808 None:intergenic
CAAACTTTATTGGTTGGACT+TGG 0.457544 8_1:-51890497 Msa1199660:five_prime_UTR
ACTCTCCAAACTTTATTGGT+TGG 0.457586 8_1:-51890503 Msa1199660:five_prime_UTR
CAGATTTCATCAGTAACCTT+CGG 0.457646 8_1:-51883364 Msa1199660:CDS
AAGGAGGGTTCAAGGGTAGA+GGG 0.459844 8_1:+51890207 None:intergenic
CAATTTCAGGAGGTGAAATC+GGG 0.460181 8_1:+51889261 None:intergenic
ACCATCCAATCCAATCTCTT+CGG 0.460263 8_1:-51889931 Msa1199660:five_prime_UTR
GGTTCTATCTCTCCACAATT+GGG 0.460350 8_1:-51891362 Msa1199660:five_prime_UTR
GTATGTTTCAATGATGAAAC+TGG 0.460739 8_1:-51887250 Msa1199660:five_prime_UTR
TTATAAGGGTGTTCGCGGAT+TGG 0.460769 8_1:-51889978 Msa1199660:five_prime_UTR
CTCGACAGAAATTTCTTGAC+AGG 0.462573 8_1:-51884505 Msa1199660:CDS
TTGGAGAGTTTCCCCAATGA+AGG 0.463150 8_1:+51890517 None:intergenic
GAGTCAATTCATGTAACTGC+AGG 0.463664 8_1:-51891412 Msa1199660:five_prime_UTR
CAAGTATAAATATTTCAGTT+GGG 0.464279 8_1:-51889499 Msa1199660:five_prime_UTR
CGAACCATCGTCTCCAATCT+GGG 0.465629 8_1:+51887005 None:intergenic
TATGTATGAAATATTGAGTA+AGG 0.465865 8_1:-51886125 Msa1199660:five_prime_UTR
CCTTAAATTGCAACAAGGCA+TGG 0.466184 8_1:-51888853 Msa1199660:five_prime_UTR
CTCATCAAGCATCAAAGAAC+AGG 0.467867 8_1:-51885547 Msa1199660:intron
GCCTATGCCGGAAGCTTCAC+AGG 0.468361 8_1:+51885184 None:intergenic
ATATTGCTGAAGGTTGAATA+GGG 0.468369 8_1:+51888321 None:intergenic
TTAAACTTCACATCTTTGGT+TGG 0.469549 8_1:+51885128 None:intergenic
TAAAATACTAGACACACATT+AGG 0.470779 8_1:-51888688 Msa1199660:five_prime_UTR
GTCTCAACCTCCACAACCCC+TGG 0.471124 8_1:-51890445 Msa1199660:five_prime_UTR
TTGGCCAGGCTCAATGCCTA+TGG 0.471299 8_1:+51886717 None:intergenic
TCAAGATCATTCTTACAAGA+AGG 0.471977 8_1:+51891156 None:intergenic
GTGACAAATGTGAGCTTGAA+AGG 0.475200 8_1:+51885094 None:intergenic
TGGTTCGGTTTGGATTGGTT+CGG 0.476344 8_1:+51885967 None:intergenic
CATCCATAGACTGCTGCTCA+TGG 0.476711 8_1:+51888945 None:intergenic
TGCGTAGGGGTGTAACGGTT+CGG 0.476797 8_1:+51885831 None:intergenic
CCAAACCGATAAGTTTGGTT+CGG 0.477012 8_1:-51885947 Msa1199660:five_prime_UTR
CCAAATCATTGCAAATCGTC+AGG 0.477905 8_1:-51885585 Msa1199660:CDS
TCAAGAACTTGAAGGTGTAC+AGG 0.479672 8_1:-51889069 Msa1199660:five_prime_UTR
TACCGTTTCCCTGGTCAACC+TGG 0.480068 8_1:+51887215 None:intergenic
AAATTTGGATTGGATCAGAT+AGG 0.482119 8_1:+51889859 None:intergenic
ACATCTTATTGAATTATTCA+GGG 0.482530 8_1:-51890575 Msa1199660:five_prime_UTR
TGTCCGAAAGTGCATTGGAT+TGG 0.483889 8_1:-51888448 Msa1199660:five_prime_UTR
ACCGAAGAGATTGGATTGGA+TGG 0.485024 8_1:+51889930 None:intergenic
GGAGGGTTCAAGGGTAGAGG+GGG 0.488257 8_1:+51890209 None:intergenic
GAAAGGTCGCCTATCCTAGA+TGG 0.489857 8_1:-51889126 Msa1199660:five_prime_UTR
TGCAATTTGAGTCAGGGCAG+CGG 0.490704 8_1:-51887162 Msa1199660:five_prime_UTR
CCAAACTTATCGGTTTGGTT+CGG 0.491267 8_1:+51885952 None:intergenic
CTCTATCGTTCCGTGGTGGT+TGG 0.492399 8_1:+51886967 None:intergenic
TATATGAAGTTTAGGTAAGT+AGG 0.492430 8_1:-51887290 Msa1199660:five_prime_UTR
CGATTGAATGAATGAATGAA+TGG 0.492619 8_1:+51887415 None:intergenic
TAAATTGTCCGAAAGTGCAT+TGG 0.493004 8_1:-51888453 Msa1199660:five_prime_UTR
CAATTACTTACACATAATTG+AGG 0.496345 8_1:+51884294 None:intergenic
CAATTCACTCCTCCTTCTAA+AGG 0.498918 8_1:-51887642 Msa1199660:five_prime_UTR
GTTAGATTTGTGAGTGTGCT+TGG 0.499772 8_1:-51889387 Msa1199660:five_prime_UTR
ATTGTTTCATGTGATTGGCT+AGG 0.500129 8_1:+51888414 None:intergenic
AACTGGTGATCGACATATCC+AGG 0.502872 8_1:-51887233 Msa1199660:five_prime_UTR
TTGGCTGGTTGCAGCTTCAG+TGG 0.503624 8_1:-51891217 Msa1199660:five_prime_UTR
CAAGATTATAAGGGTGTTCG+CGG 0.503770 8_1:-51889983 Msa1199660:five_prime_UTR
GTGATGGCTCTGAGCCTTCG+AGG 0.504190 8_1:+51890274 None:intergenic
CTTTACAATTGTGAATTGTA+CGG 0.504840 8_1:+51889429 None:intergenic
TCCTGTGAAGCTTCCGGCAT+AGG 0.506829 8_1:-51885185 Msa1199660:CDS
GCATGGTAAGGATTTAATTG+AGG 0.507031 8_1:+51886893 None:intergenic
TCGACATATCCAGGTTGACC+AGG 0.507098 8_1:-51887224 Msa1199660:five_prime_UTR
AAACACACTCAAGATTATAA+GGG 0.509540 8_1:-51889992 Msa1199660:five_prime_UTR
AGATAAGCGATTCCCCAGAT+TGG 0.509676 8_1:-51887018 Msa1199660:five_prime_UTR
TGTTCGCAATCAAATTGCAT+TGG 0.510282 8_1:+51887040 None:intergenic
ACCAAAATGCACAGCAACTC+AGG 0.510637 8_1:+51888545 None:intergenic
GTAGGTTCTGGCGTAGCATC+CGG 0.513643 8_1:-51885161 Msa1199660:CDS
GATTCAACATATGCATGGTA+AGG 0.515364 8_1:+51886881 None:intergenic
GTTCGCGGATTGGATTGGTT+CGG 0.520195 8_1:-51889968 Msa1199660:five_prime_UTR
GGCAATCACTCAGCCTACCT+TGG 0.522551 8_1:+51886698 None:intergenic
GAACTGTCACTGCCGTATCA+AGG 0.523972 8_1:-51885765 Msa1199660:five_prime_UTR
ATCCAGGTTGACCAGGGAAA+CGG 0.524632 8_1:-51887217 Msa1199660:five_prime_UTR
GTTGGAGGAACAGGATACAT+AGG 0.524983 8_1:-51888060 Msa1199660:five_prime_UTR
TGCTCAGTTTACATTGGATG+AGG 0.529316 8_1:+51887088 None:intergenic
GCCATTGAAGTAACAACAGT+TGG 0.531805 8_1:-51886675 Msa1199660:five_prime_UTR
GGCCGTTGCAATTTGAGTCA+GGG 0.534236 8_1:-51887168 Msa1199660:five_prime_UTR
GTTGAAAATGTGGCGGAGGG+TGG 0.534550 8_1:-51885239 Msa1199660:CDS
TTTGGTTGGTTTGACATCGC+CGG 0.534553 8_1:+51885142 None:intergenic
TCCTCGTCTCAAAATCTAGC+AGG 0.535091 8_1:-51885689 Msa1199660:CDS
GGACGCATGTACCGTTTCCC+TGG 0.535239 8_1:+51887206 None:intergenic
TATGTTGAATCAAGTTAAAG+AGG 0.535573 8_1:-51886869 Msa1199660:five_prime_UTR
GAACCAAACCAAACCGATGA+AGG 0.536873 8_1:-51885897 Msa1199660:five_prime_UTR
GAGGTCTAAACCAGGGGTTG+TGG 0.537480 8_1:+51890435 None:intergenic
AGGGTGTTCGCGGATTGGAT+TGG 0.538505 8_1:-51889973 Msa1199660:five_prime_UTR
GAATGTGCCTATCCATATCA+AGG 0.540832 8_1:-51888258 Msa1199660:five_prime_UTR
AATGATGCATGTATGGATCA+TGG 0.542105 8_1:-51886215 Msa1199660:five_prime_UTR
TCGTATCTGAAGGGTGCCGA+CGG 0.543474 8_1:-51886744 Msa1199660:five_prime_UTR
TAAAGGGAAACATGTAAATG+TGG 0.545097 8_1:-51888801 Msa1199660:five_prime_UTR
CGGCAGTGACAGTTCCAAAA+CGG 0.545517 8_1:+51885773 None:intergenic
GTCTAAACCAGGGGTTGTGG+AGG 0.547176 8_1:+51890438 None:intergenic
AAAGCTTCCTGTGAAGCTTC+CGG 0.547441 8_1:-51885191 Msa1199660:CDS
AACTTGATTCAACATATGCA+TGG 0.547871 8_1:+51886876 None:intergenic
ATCAGTTACATGATAAAAGG+AGG 0.549601 8_1:+51890191 None:intergenic
TAGGCACATTCACAACTTTG+TGG 0.551164 8_1:+51888270 None:intergenic
ACTAACCAAAGACACGTTTG+AGG 0.552366 8_1:+51890056 None:intergenic
ACAATTCGGTGATGTTGCTA+AGG 0.552842 8_1:+51884458 None:intergenic
CAAGAACTTGAAGGTGTACA+GGG 0.553248 8_1:-51889068 Msa1199660:five_prime_UTR
AGCAAGGTTCTAGTAGTTGG+AGG 0.553447 8_1:-51888075 Msa1199660:five_prime_UTR
TACCGAATTGTAATGTAATG+TGG 0.553604 8_1:-51887337 Msa1199660:five_prime_UTR
CAAAACCGAAGAGATTGGAT+TGG 0.555039 8_1:+51889926 None:intergenic
ATGATAAAAGGAGGGTTCAA+GGG 0.555049 8_1:+51890200 None:intergenic
TTCATCATTGAAACATACAT+TGG 0.556573 8_1:+51887255 None:intergenic
GACTGAAACCCTGCAAATTG+GGG 0.557765 8_1:-51886624 Msa1199660:five_prime_UTR
TTATGTTGAATACCGATACT+AGG 0.559190 8_1:-51890307 Msa1199660:five_prime_UTR
TGACAAATGTGAGCTTGAAA+GGG 0.559468 8_1:+51885095 None:intergenic
TAGATCAAAAGACAACAAGT+TGG 0.560421 8_1:-51889219 Msa1199660:five_prime_UTR
ATAGACTGCTGCTCATGGGA+TGG 0.560643 8_1:+51888950 None:intergenic
AACGAGATGTGACCTTGATA+CGG 0.560936 8_1:+51885753 None:intergenic
TATTCCATAGGCATTGAGCC+TGG 0.563062 8_1:-51886721 Msa1199660:five_prime_UTR
GAAGCATGCTCAGTTTACAT+TGG 0.564547 8_1:+51887082 None:intergenic
GCCTTGTTGCAATTTAAGGA+AGG 0.565947 8_1:+51888857 None:intergenic
CATGAATTGTACCATAGAGC+TGG 0.566604 8_1:-51889027 Msa1199660:five_prime_UTR
TGGACTTAGTTAATCAGCAA+AGG 0.567374 8_1:+51887060 None:intergenic
GCTGGTGCGTAGGGGTGTAA+CGG 0.567456 8_1:+51885826 None:intergenic
TCTCAAATTCCATCTAGGAT+AGG 0.568297 8_1:+51889117 None:intergenic
CAAACCGATGAAGGTTTCAT+CGG 0.569321 8_1:-51885888 Msa1199660:five_prime_UTR
GCCAGAACCTACGCCTATGC+CGG 0.572999 8_1:+51885172 None:intergenic
TATGGTTGAAAATGTGGCGG+AGG 0.574266 8_1:-51885243 Msa1199660:CDS
GGAGATCTCTCTCCTAGTAT+CGG 0.576903 8_1:+51890295 None:intergenic
GGGTGCCGACGGTATTCCAT+AGG 0.579023 8_1:-51886733 Msa1199660:five_prime_UTR
TTGCTTAAGTCACCCAATTG+TGG 0.579166 8_1:+51891350 None:intergenic
TATTTCAGTTGGGATTGGAT+CGG 0.579871 8_1:-51889489 Msa1199660:five_prime_UTR
ATCCATAGACTGCTGCTCAT+GGG 0.580000 8_1:+51888946 None:intergenic
AGTCAAAACCCCAATTTGCA+GGG 0.580253 8_1:+51886616 None:intergenic
GTGATGTTGCGATAGTCTCT+TGG 0.580555 8_1:-51890106 Msa1199660:five_prime_UTR
CAACATTCCTTGATATGGAT+AGG 0.585012 8_1:+51888251 None:intergenic
GGGTTGTGGAGGTTGAGACT+GGG 0.585239 8_1:+51890449 None:intergenic
AGAGAAGATGGAAAAGAGCA+AGG 0.586777 8_1:-51888091 Msa1199660:five_prime_UTR
GCTTGTGATCCTTTAGAAGG+AGG 0.587275 8_1:+51887633 None:intergenic
AACTGTTGTTACTTCAATGG+CGG 0.588090 8_1:+51886677 None:intergenic
ATAGGCATTGAGCCTGGCCA+AGG 0.589016 8_1:-51886715 Msa1199660:five_prime_UTR
TTCGTTCTTAGTGTCTGCTG+TGG 0.590478 8_1:+51887729 None:intergenic
TTGAAGTAACAACAGTTGGA+TGG 0.592185 8_1:-51886671 Msa1199660:five_prime_UTR
ATGTTTAAATGAAATGCTAG+TGG 0.593891 8_1:+51887383 None:intergenic
GCATTGAGCCTGGCCAAGGT+AGG 0.597021 8_1:-51886711 Msa1199660:five_prime_UTR
TGTTGCTTAATTCAGTATGA+GGG 0.597558 8_1:+51888354 None:intergenic
GAAGCTTCCGGCATAGGCGT+AGG 0.603567 8_1:-51885179 Msa1199660:CDS
TTTGGAGGAATGGTACCAGA+AGG 0.603898 8_1:+51888144 None:intergenic
TAAGGTTGCTGAGATTTGAA+GGG 0.604275 8_1:+51884476 None:intergenic
TGCCCTGACTCAAATTGCAA+CGG 0.604605 8_1:+51887166 None:intergenic
GTGGAGGTTGAGACTGGGAG+AGG 0.605726 8_1:+51890454 None:intergenic
CACAAACATACCAAATCACA+CGG 0.606500 8_1:-51888634 Msa1199660:five_prime_UTR
GTAACAACAGTTGGATGGAG+AGG 0.606584 8_1:-51886666 Msa1199660:five_prime_UTR
TGAACCGATGAAACCTTCAT+CGG 0.606780 8_1:+51885884 None:intergenic
GAGAGTTTCCCCAATGAAGG+AGG 0.607171 8_1:+51890520 None:intergenic
AGTCAATTCATGTAACTGCA+GGG 0.610124 8_1:-51891411 Msa1199660:five_prime_UTR
CAGAAATTTCTTGACAGGAG+AGG 0.611083 8_1:-51884500 Msa1199660:CDS
CAATACTTAATGTGAACCGA+AGG 0.612624 8_1:+51883348 None:intergenic
AATTCGGTATATTACTTGCG+AGG 0.612865 8_1:+51887351 None:intergenic
ATTGATGTTAAGTCTGGCAA+AGG 0.612909 8_1:+51884323 None:intergenic
CATAGGAAGAAGAATAGTGA+AGG 0.614022 8_1:-51888043 Msa1199660:five_prime_UTR
ATAATCGGCGTATCAAAGAT+GGG 0.614224 8_1:+51886811 None:intergenic
GAATGTATGTATATAACTGT+TGG 0.614237 8_1:+51887548 None:intergenic
ATGGTTGAAAATGTGGCGGA+GGG 0.614742 8_1:-51885242 Msa1199660:CDS
TCACAACGATCACAAAGCAA+TGG 0.618580 8_1:+51886836 None:intergenic
GAGTGATATGGTTGAAAATG+TGG 0.619231 8_1:-51885249 Msa1199660:CDS
TAACAACAGTTGGATGGAGA+GGG 0.620033 8_1:-51886665 Msa1199660:five_prime_UTR
AGTGCTTAGCCTTTAAAAGG+AGG 0.620658 8_1:+51890416 None:intergenic
AATACTAGACACACATTAGG+TGG 0.620662 8_1:-51888685 Msa1199660:five_prime_UTR
TAATAGTGATTAAATACCGT+AGG 0.622188 8_1:+51888514 None:intergenic
ATGTATGAAATCACAAAACA+AGG 0.622827 8_1:+51886442 None:intergenic
TTAAAAGGAGGTCTAAACCA+GGG 0.624551 8_1:+51890428 None:intergenic
TTAGACAATTCTCTAAACAA+AGG 0.627920 8_1:+51888216 None:intergenic
GGGACATGATATATTGCTGA+AGG 0.628705 8_1:+51888311 None:intergenic
AAGGCTCAGAGCCATCACTC+TGG 0.629067 8_1:-51890269 Msa1199660:five_prime_UTR
TTTAAAAGGAGGTCTAAACC+AGG 0.634030 8_1:+51890427 None:intergenic
GTTGAATCAAGTTAAAGAGG+TGG 0.634920 8_1:-51886866 Msa1199660:five_prime_UTR
TTCGTCAAGCTGGTGCGTAG+GGG 0.635563 8_1:+51885818 None:intergenic
TAAAAGGAGGTCTAAACCAG+GGG 0.636560 8_1:+51890429 None:intergenic
TGACAGTTCCAAAACGGAGT+AGG 0.640042 8_1:+51885779 None:intergenic
TACAATTGTGAATTGTACGG+TGG 0.643076 8_1:+51889432 None:intergenic
GTGAAGGCAAGTTTAGAACA+AGG 0.646091 8_1:-51888027 Msa1199660:five_prime_UTR
ATTATGCTTCTGAGACTGGA+CGG 0.651733 8_1:-51889303 Msa1199660:five_prime_UTR
GATTTGAGTGACCAGAGTGA+TGG 0.652789 8_1:+51890258 None:intergenic
TCAGTTACATGATAAAAGGA+GGG 0.653915 8_1:+51890192 None:intergenic
TGCAAAGCTCTATCGTTCCG+TGG 0.658175 8_1:+51886960 None:intergenic
CGACATATCCAGGTTGACCA+GGG 0.659737 8_1:-51887223 Msa1199660:five_prime_UTR
GCCTTCCTTAAATTGCAACA+AGG 0.660114 8_1:-51888858 Msa1199660:five_prime_UTR
ATTGCTGAACCAATTTCAGG+AGG 0.662787 8_1:+51889251 None:intergenic
TAGGAGAGAGATCTCCTCGA+AGG 0.664380 8_1:-51890288 Msa1199660:five_prime_UTR
CAATGCCTATGGAATACCGT+CGG 0.665714 8_1:+51886728 None:intergenic
ATTCCCCAGATTGGAGACGA+TGG 0.669771 8_1:-51887009 Msa1199660:five_prime_UTR
TGTTTCATGTGATTGGCTAG+GGG 0.674026 8_1:+51888416 None:intergenic
GCAACAACGAATTGTAGCAG+AGG 0.675734 8_1:+51887121 None:intergenic
GAACCATCGTCTCCAATCTG+GGG 0.682279 8_1:+51887006 None:intergenic
AAATCCACAAGCTTCAACTG+AGG 0.685212 8_1:+51883397 None:intergenic
ACGGCCAGAAACAACATGCG+AGG 0.695230 8_1:+51887185 None:intergenic
TGTGTATGAGTACCATGTGA+GGG 0.699775 8_1:+51885051 None:intergenic
AAAGCTCTATCGTTCCGTGG+TGG 0.701677 8_1:+51886963 None:intergenic
ATAACTGAGAGGATTATCAG+AGG 0.705317 8_1:-51888900 Msa1199660:five_prime_UTR
CAATATTCCAGATACATTAG+GGG 0.710334 8_1:-51891194 Msa1199660:five_prime_UTR
TGATATGGTTGAAAATGTGG+CGG 0.720955 8_1:-51885246 Msa1199660:CDS
GAAATTCTAGGATAACTGAG+AGG 0.726491 8_1:-51888911 Msa1199660:five_prime_UTR
AATGATCGATCCAACCACCA+CGG 0.729748 8_1:-51886977 Msa1199660:five_prime_UTR
ATGTGTATGAGTACCATGTG+AGG 0.736294 8_1:+51885050 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GATTTTAAAACTAAATTAAT+TGG + chr8_1:51884900-51884919 None:intergenic 10.0%
!!! TTTTATGACATTTTATAAAA+AGG - chr8_1:51885027-51885046 Msa1199660:intron 10.0%
!! AATTACCATATATATAATAT+AGG + chr8_1:51888205-51888224 None:intergenic 10.0%
!! AATAGCATTAAAAAATAATT+GGG + chr8_1:51889062-51889081 None:intergenic 10.0%
!! AAATAGCATTAAAAAATAAT+TGG + chr8_1:51889063-51889082 None:intergenic 10.0%
!!! AAAGAAAATTTGAAATATTA+AGG + chr8_1:51890167-51890186 None:intergenic 10.0%
!! TTCAGTATAATAAAAATAAA+TGG + chr8_1:51890211-51890230 None:intergenic 10.0%
!! AATTTAAAAGATGAAAATTA+TGG + chr8_1:51891313-51891332 None:intergenic 10.0%
!!! AAGTTTTAGTAATTTTCATA+AGG - chr8_1:51883523-51883542 Msa1199660:intron 15.0%
!! AAATAATATTTCTTCAAAGA+AGG - chr8_1:51885173-51885192 Msa1199660:CDS 15.0%
!!! TTTATTTTAAATGTGGTTTT+TGG + chr8_1:51888238-51888257 None:intergenic 15.0%
!! AATTCTAAATCTATAGTTTA+TGG - chr8_1:51888371-51888390 Msa1199660:five_prime_UTR 15.0%
!!! ATGGAATGTTTTTATTTAAT+TGG - chr8_1:51888390-51888409 Msa1199660:five_prime_UTR 15.0%
!!! TGGAATGTTTTTATTTAATT+GGG - chr8_1:51888391-51888410 Msa1199660:five_prime_UTR 15.0%
!!! GATGTTTTTATTTAATTTCA+TGG - chr8_1:51888428-51888447 Msa1199660:five_prime_UTR 15.0%
!!! TTTAAAACATCATGAAATTA+TGG + chr8_1:51888457-51888476 None:intergenic 15.0%
!!! TTTTGACTATGTTTTAATTT+TGG - chr8_1:51888516-51888535 Msa1199660:five_prime_UTR 15.0%
!!! TTTGACTATGTTTTAATTTT+GGG - chr8_1:51888517-51888536 Msa1199660:five_prime_UTR 15.0%
!!! TATTTTTTAATGCTATTTAG+AGG - chr8_1:51889065-51889084 Msa1199660:five_prime_UTR 15.0%
!! TAATAAAAATAAATGGAAGA+AGG + chr8_1:51890204-51890223 None:intergenic 15.0%
!!! ATTTGAAACAATTAACAAAA+AGG + chr8_1:51890250-51890269 None:intergenic 15.0%
!! ATCATATCATATCATATTAA+AGG + chr8_1:51890937-51890956 None:intergenic 15.0%
!!! AATTTTCATCTTTTAAATTC+AGG - chr8_1:51891314-51891333 Msa1199660:intron 15.0%
!! TCCTTTAATAAAGGTTTAAT+GGG - chr8_1:51883405-51883424 Msa1199660:CDS 20.0%
!!! TTGACTGATGTTTTAAAAAT+TGG - chr8_1:51883983-51884002 Msa1199660:intron 20.0%
!!! TGATGTTTTAAAAATTGGAA+CGG - chr8_1:51883988-51884007 Msa1199660:intron 20.0%
!! ACATCTTATTGAATTATTCA+GGG - chr8_1:51884213-51884232 Msa1199660:intron 20.0%
!!! TTTTTTTAGTGTTAATAACG+TGG - chr8_1:51884409-51884428 Msa1199660:intron 20.0%
!!! TGACATTTTATAAAAAGGTA+AGG - chr8_1:51885032-51885051 Msa1199660:intron 20.0%
!! TCAAGTATAAATATTTCAGT+TGG - chr8_1:51885288-51885307 Msa1199660:intron 20.0%
!! CAAGTATAAATATTTCAGTT+GGG - chr8_1:51885289-51885308 Msa1199660:intron 20.0%
!!! TTAAATATTTTATCTGCGAA+AGG - chr8_1:51885645-51885664 Msa1199660:CDS 20.0%
!! TATAAATTGTTTCATGTGAT+TGG + chr8_1:51886382-51886401 None:intergenic 20.0%
!! CTATATAGATAGATAGATAT+AGG + chr8_1:51886867-51886886 None:intergenic 20.0%
!!! TGAATGAAATTTTGAATGAT+TGG + chr8_1:51887320-51887339 None:intergenic 20.0%
!!! GGAATGTTTTTATTTAATTG+GGG - chr8_1:51888392-51888411 Msa1199660:five_prime_UTR 20.0%
!!! TTCATGATGTTTTAAATTTC+AGG - chr8_1:51888461-51888480 Msa1199660:five_prime_UTR 20.0%
!!! TGTTTTAATTTCAATTTGCA+TGG - chr8_1:51888485-51888504 Msa1199660:five_prime_UTR 20.0%
!!! TAATTTTGGGAAATTCTTTT+TGG - chr8_1:51888530-51888549 Msa1199660:five_prime_UTR 20.0%
!!! AAGTTGTTTTTAAAGAATGA+TGG - chr8_1:51888621-51888640 Msa1199660:five_prime_UTR 20.0%
!! TATGTATGAAATATTGAGTA+AGG - chr8_1:51888663-51888682 Msa1199660:five_prime_UTR 20.0%
!!! AACTAAATAAATAACTTGTG+CGG + chr8_1:51889487-51889506 None:intergenic 20.0%
!!! TATCCAAAAAAGATCATTTT+AGG - chr8_1:51889986-51890005 Msa1199660:five_prime_UTR 20.0%
!!! AAACCTAAAATGATCTTTTT+TGG + chr8_1:51889992-51890011 None:intergenic 20.0%
!! TTATTTGATGGAAATGATTT+AGG - chr8_1:51890079-51890098 Msa1199660:five_prime_UTR 20.0%
!!! GGATTTTATAATAACATCAA+TGG - chr8_1:51890386-51890405 Msa1199660:five_prime_UTR 20.0%
!! ATGAAAATCATTTCTCTTAT+AGG + chr8_1:51890547-51890566 None:intergenic 20.0%
!!! GTTAATTAAGTCCATATTTT+TGG - chr8_1:51890761-51890780 Msa1199660:intron 20.0%
!! AACTTCATTAACCAAAAATA+TGG + chr8_1:51890775-51890794 None:intergenic 20.0%
!! ATCAATAGATAATGTTATGT+AGG - chr8_1:51890988-51891007 Msa1199660:intron 20.0%
!! TCAATAGATAATGTTATGTA+GGG - chr8_1:51890989-51891008 Msa1199660:intron 20.0%
!! TAAGTATAAACTACAAACAT+TGG - chr8_1:51891278-51891297 Msa1199660:intron 20.0%
! GTCCTTTAATAAAGGTTTAA+TGG - chr8_1:51883404-51883423 Msa1199660:CDS 25.0%
! ACCCATTAAACCTTTATTAA+AGG + chr8_1:51883409-51883428 None:intergenic 25.0%
! AAAATCGACAACAATTTGAA+TGG - chr8_1:51883721-51883740 Msa1199660:intron 25.0%
! ACAACAATTTGAATGGTTAA+AGG - chr8_1:51883728-51883747 Msa1199660:CDS 25.0%
! GAATGTAATTAACCACATAT+TGG + chr8_1:51883759-51883778 None:intergenic 25.0%
! TACATTCATAAGACGATTAA+TGG - chr8_1:51883772-51883791 Msa1199660:CDS 25.0%
! GTTTGAACAACTGAAAATAA+TGG + chr8_1:51883868-51883887 None:intergenic 25.0%
! TTTGATCCTGTTATAATGTA+GGG - chr8_1:51884052-51884071 Msa1199660:intron 25.0%
! CACATCTTATTGAATTATTC+AGG - chr8_1:51884212-51884231 Msa1199660:intron 25.0%
! TTAAATTCAAACAACTTCAC+TGG - chr8_1:51884238-51884257 Msa1199660:intron 25.0%
! ATAACGTGGAAAAATTGAAA+AGG - chr8_1:51884423-51884442 Msa1199660:intron 25.0%
! GAAATCAGTTACATGATAAA+AGG + chr8_1:51884603-51884622 None:intergenic 25.0%
! AAAACACACTCAAGATTATA+AGG - chr8_1:51884795-51884814 Msa1199660:intron 25.0%
! AAACACACTCAAGATTATAA+GGG - chr8_1:51884796-51884815 Msa1199660:intron 25.0%
! TGATCCAATCCAAATTTATT+CGG - chr8_1:51884935-51884954 Msa1199660:intron 25.0%
! CAATTCAAACCGAATAAATT+TGG + chr8_1:51884947-51884966 None:intergenic 25.0%
!! CAAATTTATTCGGTTTGAAT+TGG - chr8_1:51884945-51884964 Msa1199660:intron 25.0%
! ATAAATATTTCAGTTGGGAT+TGG - chr8_1:51885294-51885313 Msa1199660:intron 25.0%
! CTTTACAATTGTGAATTGTA+CGG + chr8_1:51885362-51885381 None:intergenic 25.0%
! TGGAAGAGAACAAAAAATAA+AGG - chr8_1:51886007-51886026 Msa1199660:five_prime_UTR 25.0%
!! ATTTTATCTGTGAATGTTTC+AGG + chr8_1:51886086-51886105 None:intergenic 25.0%
! TAAAATACTAGACACACATT+AGG - chr8_1:51886100-51886119 Msa1199660:five_prime_UTR 25.0%
!!! ATTTTGGTATACAAATCCTA+CGG - chr8_1:51886258-51886277 Msa1199660:five_prime_UTR 25.0%
! TAATAGTGATTAAATACCGT+AGG + chr8_1:51886277-51886296 None:intergenic 25.0%
! TTAGACAATTCTCTAAACAA+AGG + chr8_1:51886575-51886594 None:intergenic 25.0%
! AAAGAAGAAAAAAGAGAAGA+TGG - chr8_1:51886685-51886704 Msa1199660:five_prime_UTR 25.0%
! ATGTATATAACTGTTGGTAT+AGG + chr8_1:51887237-51887256 None:intergenic 25.0%
! GAATGTATGTATATAACTGT+TGG + chr8_1:51887243-51887262 None:intergenic 25.0%
! ATGTTTAAATGAAATGCTAG+TGG + chr8_1:51887408-51887427 None:intergenic 25.0%
! TTCCACATTACATTACAATT+CGG + chr8_1:51887456-51887475 None:intergenic 25.0%
! TGACATGATATATGAAGTTT+AGG - chr8_1:51887490-51887509 Msa1199660:five_prime_UTR 25.0%
! TATATGAAGTTTAGGTAAGT+AGG - chr8_1:51887498-51887517 Msa1199660:five_prime_UTR 25.0%
! TTCATCATTGAAACATACAT+TGG + chr8_1:51887536-51887555 None:intergenic 25.0%
! AATTTCACTGAGAACAAAAT+TGG - chr8_1:51887857-51887876 Msa1199660:five_prime_UTR 25.0%
! TATGTTGAATCAAGTTAAAG+AGG - chr8_1:51887919-51887938 Msa1199660:five_prime_UTR 25.0%
! CACGACCTATATTATATATA+TGG - chr8_1:51888197-51888216 Msa1199660:five_prime_UTR 25.0%
!!! AGTTTTTTGAAGTAGATGTT+AGG - chr8_1:51889317-51889336 Msa1199660:five_prime_UTR 25.0%
!!! GTTTTTTGAAGTAGATGTTA+GGG - chr8_1:51889318-51889337 Msa1199660:five_prime_UTR 25.0%
! TTTCCATCAAATAATATGTC+AGG + chr8_1:51890073-51890092 None:intergenic 25.0%
! AATAAATGGAAGAAGGAATT+TGG + chr8_1:51890197-51890216 None:intergenic 25.0%
! TGTTTCAAATTTATGACAGT+CGG - chr8_1:51890260-51890279 Msa1199660:five_prime_UTR 25.0%
! AAATCTAAGTTCTCACAATT+CGG + chr8_1:51890347-51890366 None:intergenic 25.0%
! CAATTACTTACACATAATTG+AGG + chr8_1:51890497-51890516 None:intergenic 25.0%
! CTCAATTATGTGTAAGTAAT+TGG - chr8_1:51890495-51890514 Msa1199660:five_prime_UTR 25.0%
! TCGTGAATATTGTTGAAATT+TGG + chr8_1:51890574-51890593 None:intergenic 25.0%
!! CTTAATTAACCTCAATTTTG+AGG + chr8_1:51890751-51890770 None:intergenic 25.0%
! GGTTAATGAAGTTATGTAAA+TGG - chr8_1:51890782-51890801 Msa1199660:intron 25.0%
! AGTTAATTAGGTTCAATGAT+TGG + chr8_1:51890834-51890853 None:intergenic 25.0%
! GTTATTTGCACAACAAAAAT+TGG + chr8_1:51890905-51890924 None:intergenic 25.0%
! GATAAAGTTGAAAACCAAAT+TGG + chr8_1:51891050-51891069 None:intergenic 25.0%
! TTTGTAAATTACTTACAGAG+TGG + chr8_1:51891081-51891100 None:intergenic 25.0%
!! TAGATTTGATAACTTGACAA+GGG + chr8_1:51891122-51891141 None:intergenic 25.0%
!! TTAGATTTGATAACTTGACA+AGG + chr8_1:51891123-51891142 None:intergenic 25.0%
! TCAAGTTATCAAATCTAACA+AGG - chr8_1:51891125-51891144 Msa1199660:five_prime_UTR 25.0%
! TCCATGATCTATTAGTATTA+TGG - chr8_1:51891164-51891183 Msa1199660:five_prime_UTR 25.0%
! TCCATAATACTAATAGATCA+TGG + chr8_1:51891168-51891187 None:intergenic 25.0%
! TCTATTAGTATTATGGAGTT+TGG - chr8_1:51891171-51891190 Msa1199660:five_prime_UTR 25.0%
AGGGATTTGTCCTTTAATAA+AGG - chr8_1:51883396-51883415 Msa1199660:CDS 30.0%
AATGACATTGGGAAATTAAC+TGG + chr8_1:51883495-51883514 None:intergenic 30.0%
CTTTCACTTGAAATGACATT+GGG + chr8_1:51883506-51883525 None:intergenic 30.0%
ACTTTCACTTGAAATGACAT+TGG + chr8_1:51883507-51883526 None:intergenic 30.0%
GCAATATTCCAGATACATTA+GGG - chr8_1:51883593-51883612 Msa1199660:CDS 30.0%
CAATATTCCAGATACATTAG+GGG - chr8_1:51883594-51883613 Msa1199660:CDS 30.0%
TCAAGATCATTCTTACAAGA+AGG + chr8_1:51883635-51883654 None:intergenic 30.0%
TTAAAGGTCATTCCAATATG+TGG - chr8_1:51883744-51883763 Msa1199660:CDS 30.0%
! GTTAATGACGTTTAAAATCG+CGG + chr8_1:51883846-51883865 None:intergenic 30.0%
ATTATACCGACCATATAGAT+TGG - chr8_1:51883909-51883928 Msa1199660:intron 30.0%
TTATACCGACCATATAGATT+GGG - chr8_1:51883910-51883929 Msa1199660:intron 30.0%
TATAACAGGATCAAACCAAT+GGG + chr8_1:51884047-51884066 None:intergenic 30.0%
TTATAACAGGATCAAACCAA+TGG + chr8_1:51884048-51884067 None:intergenic 30.0%
GTTTGATCCTGTTATAATGT+AGG - chr8_1:51884051-51884070 Msa1199660:intron 30.0%
!!! AAATGTTTTAGAAACCGAAC+TGG + chr8_1:51884146-51884165 None:intergenic 30.0%
TTATGTTGAATACCGATACT+AGG - chr8_1:51884481-51884500 Msa1199660:CDS 30.0%
TCAGTTACATGATAAAAGGA+GGG + chr8_1:51884599-51884618 None:intergenic 30.0%
ATCAGTTACATGATAAAAGG+AGG + chr8_1:51884600-51884619 None:intergenic 30.0%
AATAACAAAACCGAAGAGAT+TGG + chr8_1:51884870-51884889 None:intergenic 30.0%
! AAATTTGGATTGGATCAGAT+AGG + chr8_1:51884932-51884951 None:intergenic 30.0%
CAAACCGAATAAATTTGGAT+TGG + chr8_1:51884942-51884961 None:intergenic 30.0%
! TTATTCGGTTTGAATTGGAT+TGG - chr8_1:51884950-51884969 Msa1199660:intron 30.0%
! GTTTGAATTGGATTGGATTT+CGG - chr8_1:51884957-51884976 Msa1199660:intron 30.0%
TATGCTAAGAATTGGACTTT+CGG - chr8_1:51885324-51885343 Msa1199660:intron 30.0%
!!! ATCTCAAGTTTTGTTGACTT+TGG - chr8_1:51885461-51885480 Msa1199660:intron 30.0%
AATATTGCTGAACCAATTTC+AGG + chr8_1:51885543-51885562 None:intergenic 30.0%
!!! AACTTGTTGTCTTTTGATCT+AGG + chr8_1:51885570-51885589 None:intergenic 30.0%
TAGATCAAAAGACAACAAGT+TGG - chr8_1:51885569-51885588 Msa1199660:CDS 30.0%
!!! TTGGATAGTTTTGAAACTTG+TGG - chr8_1:51885588-51885607 Msa1199660:CDS 30.0%
ATTACTCTCAAATTCCATCT+AGG + chr8_1:51885679-51885698 None:intergenic 30.0%
GTTATCCTAGAATTTCATCT+TGG + chr8_1:51885873-51885892 None:intergenic 30.0%
TAAAGGGAAACATGTAAATG+TGG - chr8_1:51885987-51886006 Msa1199660:five_prime_UTR 30.0%
! TGTTGCTTAATTCAGTATGA+GGG + chr8_1:51886437-51886456 None:intergenic 30.0%
AAGGTTGAATAGGGATATTT+AGG + chr8_1:51886461-51886480 None:intergenic 30.0%
ATATTGCTGAAGGTTGAATA+GGG + chr8_1:51886470-51886489 None:intergenic 30.0%
TATATTGCTGAAGGTTGAAT+AGG + chr8_1:51886471-51886490 None:intergenic 30.0%
AAGTACAACATTCCTTGATA+TGG + chr8_1:51886545-51886564 None:intergenic 30.0%
ATTCACTTGAAAAGAGCTTA+TGG - chr8_1:51886609-51886628 Msa1199660:five_prime_UTR 30.0%
TTCACTTGAAAAGAGCTTAT+GGG - chr8_1:51886610-51886629 Msa1199660:five_prime_UTR 30.0%
!!! AATGTTTTGTTTTGGAGGAA+TGG + chr8_1:51886657-51886676 None:intergenic 30.0%
!!! CTTCAAATGTTTTGTTTTGG+AGG + chr8_1:51886662-51886681 None:intergenic 30.0%
!!! GTGCTTCAAATGTTTTGTTT+TGG + chr8_1:51886665-51886684 None:intergenic 30.0%
GATAGATATAGGAATCTTCA+TGG + chr8_1:51886856-51886875 None:intergenic 30.0%
! CTCTTGAGGTTATATAGTTT+TGG + chr8_1:51887105-51887124 None:intergenic 30.0%
! TAGGTTATGTGTTTTCTCTT+AGG + chr8_1:51887218-51887237 None:intergenic 30.0%
CGATTGAATGAATGAATGAA+TGG + chr8_1:51887376-51887395 None:intergenic 30.0%
TACCGAATTGTAATGTAATG+TGG - chr8_1:51887451-51887470 Msa1199660:five_prime_UTR 30.0%
GTATGTTTCAATGATGAAAC+TGG - chr8_1:51887538-51887557 Msa1199660:five_prime_UTR 30.0%
AACTTGATTCAACATATGCA+TGG + chr8_1:51887915-51887934 None:intergenic 30.0%
! GTTGATAAATGATGCATGTA+TGG - chr8_1:51888566-51888585 Msa1199660:five_prime_UTR 30.0%
!! AATGATGGATGAATGAATCT+TGG - chr8_1:51888636-51888655 Msa1199660:five_prime_UTR 30.0%
AAGAAAAAAATGGAGTTGTG+TGG + chr8_1:51889128-51889147 None:intergenic 30.0%
! AGGAAAATCAGATGAGTTTT+GGG + chr8_1:51889276-51889295 None:intergenic 30.0%
! AAGGAAAATCAGATGAGTTT+TGG + chr8_1:51889277-51889296 None:intergenic 30.0%
!!! TCTGATTTTCCTTGTTTTAC+TGG - chr8_1:51889284-51889303 Msa1199660:five_prime_UTR 30.0%
!!! ATTTTCCTTGTTTTACTGGT+TGG - chr8_1:51889288-51889307 Msa1199660:five_prime_UTR 30.0%
TGAATAGACATTGAGTGATA+TGG - chr8_1:51889527-51889546 Msa1199660:five_prime_UTR 30.0%
TTAAACTTCACATCTTTGGT+TGG + chr8_1:51889663-51889682 None:intergenic 30.0%
CACTTTAAACTTCACATCTT+TGG + chr8_1:51889667-51889686 None:intergenic 30.0%
! GTCTCAACTCTAAATTTTTG+TGG - chr8_1:51890025-51890044 Msa1199660:five_prime_UTR 30.0%
CTTCCTGACATATTATTTGA+TGG - chr8_1:51890067-51890086 Msa1199660:five_prime_UTR 30.0%
TTTGATGGAAATGATTTAGG+TGG - chr8_1:51890082-51890101 Msa1199660:five_prime_UTR 30.0%
TTGATGGAAATGATTTAGGT+GGG - chr8_1:51890083-51890102 Msa1199660:five_prime_UTR 30.0%
TTGAGACACGGATATATAAA+AGG - chr8_1:51890365-51890384 Msa1199660:five_prime_UTR 30.0%
TTATCCATTGATGTTAAGTC+TGG + chr8_1:51890474-51890493 None:intergenic 30.0%
TGCTTCATTAACCATGAATT+AGG - chr8_1:51890692-51890711 Msa1199660:intron 30.0%
TCATTAACCATGAATTAGGA+AGG - chr8_1:51890696-51890715 Msa1199660:intron 30.0%
CATTAACCATGAATTAGGAA+GGG - chr8_1:51890697-51890716 Msa1199660:intron 30.0%
ATTAACCATGAATTAGGAAG+GGG - chr8_1:51890698-51890717 Msa1199660:intron 30.0%
GTTCACATAAGCAGTTAATT+AGG + chr8_1:51890846-51890865 None:intergenic 30.0%
! TTTTGCGACAACAATATAAG+TGG + chr8_1:51890877-51890896 None:intergenic 30.0%
AGTCAATTCATGTAACTGCA+GGG - chr8_1:51883377-51883396 Msa1199660:CDS 35.0%
! GCTTTAAACTTCACTGTTTC+AGG - chr8_1:51883545-51883564 Msa1199660:intron 35.0%
! ACTTCACTGTTTCAGGATTT+TGG - chr8_1:51883552-51883571 Msa1199660:intron 35.0%
GGCAATATTCCAGATACATT+AGG - chr8_1:51883592-51883611 Msa1199660:CDS 35.0%
! GACGATTAATGGATATCACA+AGG - chr8_1:51883783-51883802 Msa1199660:intron 35.0%
AAATCGCGGCTAATTACATT+CGG + chr8_1:51883832-51883851 None:intergenic 35.0%
TATACCGACCATATAGATTG+GGG - chr8_1:51883911-51883930 Msa1199660:intron 35.0%
! ATTGGTTCAATCAGTTGTAC+CGG + chr8_1:51884097-51884116 None:intergenic 35.0%
CAACTGATTGAACCAATGAT+CGG - chr8_1:51884100-51884119 Msa1199660:intron 35.0%
TGGAAAAATACCTCCTTCAT+TGG - chr8_1:51884258-51884277 Msa1199660:intron 35.0%
GGAAAAATACCTCCTTCATT+GGG - chr8_1:51884259-51884278 Msa1199660:intron 35.0%
GAAAAATACCTCCTTCATTG+GGG - chr8_1:51884260-51884279 Msa1199660:intron 35.0%
GGAAACTCTCCAAACTTTAT+TGG - chr8_1:51884281-51884300 Msa1199660:intron 35.0%
ACTCTCCAAACTTTATTGGT+TGG - chr8_1:51884285-51884304 Msa1199660:intron 35.0%
CAAGTCCAACCAATAAAGTT+TGG + chr8_1:51884293-51884312 None:intergenic 35.0%
! CAAACTTTATTGGTTGGACT+TGG - chr8_1:51884291-51884310 Msa1199660:intron 35.0%
TTAAAAGGAGGTCTAAACCA+GGG + chr8_1:51884363-51884382 None:intergenic 35.0%
TTTAAAAGGAGGTCTAAACC+AGG + chr8_1:51884364-51884383 None:intergenic 35.0%
! TGGTTTAGACCTCCTTTTAA+AGG - chr8_1:51884363-51884382 Msa1199660:intron 35.0%
! ACAAGTGCTTAGCCTTTAAA+AGG + chr8_1:51884378-51884397 None:intergenic 35.0%
! CTAAGCACTTGTGAGTATTT+TGG - chr8_1:51884386-51884405 Msa1199660:intron 35.0%
CGTGGAAAAATTGAAAAGGA+CGG - chr8_1:51884427-51884446 Msa1199660:intron 35.0%
ATGATAAAAGGAGGGTTCAA+GGG + chr8_1:51884591-51884610 None:intergenic 35.0%
!! GAGTAGTTAGCTTGTTAGTT+AGG + chr8_1:51884627-51884646 None:intergenic 35.0%
CACACTTTCAAGGAACAAAA+TGG + chr8_1:51884660-51884679 None:intergenic 35.0%
!! TTTTGTTCCTTGAAAGTGTG+AGG - chr8_1:51884660-51884679 Msa1199660:intron 35.0%
AAAAACCTCAAACGTGTCTT+TGG - chr8_1:51884727-51884746 Msa1199660:intron 35.0%
TATTTCAGTTGGGATTGGAT+CGG - chr8_1:51885299-51885318 Msa1199660:intron 35.0%
! GATCGGTTTATGCTAAGAAT+TGG - chr8_1:51885316-51885335 Msa1199660:intron 35.0%
TACAATTGTGAATTGTACGG+TGG + chr8_1:51885359-51885378 None:intergenic 35.0%
!!! GATAGTTTTGAAACTTGTGG+TGG - chr8_1:51885591-51885610 Msa1199660:CDS 35.0%
TGGAATTTCTCCGAAAAGTT+TGG - chr8_1:51885611-51885630 Msa1199660:CDS 35.0%
! CCTTCTTGTACCAAACTTTT+CGG + chr8_1:51885624-51885643 None:intergenic 35.0%
! TCTCAAATTCCATCTAGGAT+AGG + chr8_1:51885674-51885693 None:intergenic 35.0%
GCATTCCAAGATGAAATTCT+AGG - chr8_1:51885865-51885884 Msa1199660:five_prime_UTR 35.0%
!! GAAATTCTAGGATAACTGAG+AGG - chr8_1:51885877-51885896 Msa1199660:five_prime_UTR 35.0%
ATAACTGAGAGGATTATCAG+AGG - chr8_1:51885888-51885907 Msa1199660:five_prime_UTR 35.0%
TGACACTTTGACTGAGTTAA+AGG - chr8_1:51885970-51885989 Msa1199660:five_prime_UTR 35.0%
GACACTTTGACTGAGTTAAA+GGG - chr8_1:51885971-51885990 Msa1199660:five_prime_UTR 35.0%
AATACTAGACACACATTAGG+TGG - chr8_1:51886103-51886122 Msa1199660:five_prime_UTR 35.0%
CACAAACATACCAAATCACA+CGG - chr8_1:51886154-51886173 Msa1199660:five_prime_UTR 35.0%
! ATCGTCTAAAAGTGTACTTC+AGG + chr8_1:51886314-51886333 None:intergenic 35.0%
! TAAATTGTCCGAAAGTGCAT+TGG - chr8_1:51886335-51886354 Msa1199660:five_prime_UTR 35.0%
! TTGTTTCATGTGATTGGCTA+GGG + chr8_1:51886376-51886395 None:intergenic 35.0%
! ATTGTTTCATGTGATTGGCT+AGG + chr8_1:51886377-51886396 None:intergenic 35.0%
! CTGTTGCTTAATTCAGTATG+AGG + chr8_1:51886438-51886457 None:intergenic 35.0%
CAACATTCCTTGATATGGAT+AGG + chr8_1:51886540-51886559 None:intergenic 35.0%
CAAGGAATGTTGTACTTTAG+AGG - chr8_1:51886548-51886567 Msa1199660:five_prime_UTR 35.0%
CATAGGAAGAAGAATAGTGA+AGG - chr8_1:51886745-51886764 Msa1199660:five_prime_UTR 35.0%
!! TTTTGGTTAGCAGGACATAT+AGG + chr8_1:51887031-51887050 None:intergenic 35.0%
AATTCGGTATATTACTTGCG+AGG + chr8_1:51887440-51887459 None:intergenic 35.0%
TGGACTTAGTTAATCAGCAA+AGG + chr8_1:51887731-51887750 None:intergenic 35.0%
TGTTCGCAATCAAATTGCAT+TGG + chr8_1:51887751-51887770 None:intergenic 35.0%
GCATGGTAAGGATTTAATTG+AGG + chr8_1:51887898-51887917 None:intergenic 35.0%
GATTCAACATATGCATGGTA+AGG + chr8_1:51887910-51887929 None:intergenic 35.0%
GTTGAATCAAGTTAAAGAGG+TGG - chr8_1:51887922-51887941 Msa1199660:five_prime_UTR 35.0%
ATAATCGGCGTATCAAAGAT+GGG + chr8_1:51887980-51887999 None:intergenic 35.0%
! ATCTTTGATACGCCGATTAT+CGG - chr8_1:51887980-51887999 Msa1199660:five_prime_UTR 35.0%
! GCATTTTCTTCGTATCTGAA+GGG - chr8_1:51888035-51888054 Msa1199660:five_prime_UTR 35.0%
! AACTGTTGTTACTTCAATGG+CGG + chr8_1:51888114-51888133 None:intergenic 35.0%
! TCCAACTGTTGTTACTTCAA+TGG + chr8_1:51888117-51888136 None:intergenic 35.0%
TTGAAGTAACAACAGTTGGA+TGG - chr8_1:51888117-51888136 Msa1199660:five_prime_UTR 35.0%
TAATTGGGGTTCATCTAGTT+TGG - chr8_1:51888406-51888425 Msa1199660:five_prime_UTR 35.0%
AATGATGCATGTATGGATCA+TGG - chr8_1:51888573-51888592 Msa1199660:five_prime_UTR 35.0%
AGAAACCGAACCAAACTTAT+CGG + chr8_1:51888849-51888868 None:intergenic 35.0%
!!! ATTCGCACTTTTTGGGTTTT+TGG + chr8_1:51889162-51889181 None:intergenic 35.0%
!! ACCCAAAAAGTGCGAATTTT+TGG - chr8_1:51889165-51889184 Msa1199660:five_prime_UTR 35.0%
!! CCCAAAAATTCGCACTTTTT+GGG + chr8_1:51889169-51889188 None:intergenic 35.0%
!! CCCAAAAAGTGCGAATTTTT+GGG - chr8_1:51889166-51889185 Msa1199660:five_prime_UTR 35.0%
! ACCCAAAAATTCGCACTTTT+TGG + chr8_1:51889170-51889189 None:intergenic 35.0%
! GGAAAATCAGATGAGTTTTG+GGG + chr8_1:51889275-51889294 None:intergenic 35.0%
GGCGCAAAAATTCAAAAACT+AGG + chr8_1:51889441-51889460 None:intergenic 35.0%
AGCAAAGCAAGGAAAAAAAG+TGG + chr8_1:51889462-51889481 None:intergenic 35.0%
GAGTGATATGGTTGAAAATG+TGG - chr8_1:51889539-51889558 Msa1199660:five_prime_UTR 35.0%
TGATATGGTTGAAAATGTGG+CGG - chr8_1:51889542-51889561 Msa1199660:five_prime_UTR 35.0%
TGACAAATGTGAGCTTGAAA+GGG + chr8_1:51889696-51889715 None:intergenic 35.0%
AAGTTGACATTTGCGATGTT+TGG - chr8_1:51889763-51889782 Msa1199660:five_prime_UTR 35.0%
GAACTAGTCCTATTGTAGAA+GGG + chr8_1:51890114-51890133 None:intergenic 35.0%
TGAACTAGTCCTATTGTAGA+AGG + chr8_1:51890115-51890134 None:intergenic 35.0%
TAAGGTTGCTGAGATTTGAA+GGG + chr8_1:51890315-51890334 None:intergenic 35.0%
! GAGAACTTAGATTTGAGACA+CGG - chr8_1:51890353-51890372 Msa1199660:five_prime_UTR 35.0%
ATTGATGTTAAGTCTGGCAA+AGG + chr8_1:51890468-51890487 None:intergenic 35.0%
TTTGCCAGACTTAACATCAA+TGG - chr8_1:51890467-51890486 Msa1199660:five_prime_UTR 35.0%
TGTAAGTAATTGGCATGAGT+TGG - chr8_1:51890505-51890524 Msa1199660:five_prime_UTR 35.0%
TATTCACGACAACATTTGAG+TGG - chr8_1:51890585-51890604 Msa1199660:five_prime_UTR 35.0%
AGTGGTTAGCACATTTCAAT+TGG - chr8_1:51890603-51890622 Msa1199660:five_prime_UTR 35.0%
CATGGTTAATGAAGCAATCA+TGG + chr8_1:51890688-51890707 None:intergenic 35.0%
GTTCAACTACCTCAAAATTG+AGG - chr8_1:51890739-51890758 Msa1199660:intron 35.0%
ATCCATCAAAAGCTCCAATT+TGG - chr8_1:51891033-51891052 Msa1199660:intron 35.0%
! AACCAAATTGGAGCTTTTGA+TGG + chr8_1:51891038-51891057 None:intergenic 35.0%
!!! CTGAATAGTTTTGATGGAAG+AGG + chr8_1:51891210-51891229 None:intergenic 35.0%
!! ACTTACACTTGCTGTATTTG+AGG + chr8_1:51891237-51891256 None:intergenic 35.0%
CAGATTTCATCAGTAACCTT+CGG - chr8_1:51891424-51891443 Msa1199660:five_prime_UTR 35.0%
GAGTCAATTCATGTAACTGC+AGG - chr8_1:51883376-51883395 Msa1199660:CDS 40.0%
GGTTCTATCTCTCCACAATT+GGG - chr8_1:51883426-51883445 Msa1199660:CDS 40.0%
TTGCTTAAGTCACCCAATTG+TGG + chr8_1:51883441-51883460 None:intergenic 40.0%
GAAAGATCCCCTAATGTATC+TGG + chr8_1:51883604-51883623 None:intergenic 40.0%
ATACCGACCATATAGATTGG+GGG - chr8_1:51883912-51883931 Msa1199660:intron 40.0%
GAAAGATCCCCCAATCTATA+TGG + chr8_1:51883922-51883941 None:intergenic 40.0%
TATAGATTGGGGGATCTTTC+AGG - chr8_1:51883922-51883941 Msa1199660:intron 40.0%
ATAGATTGGGGGATCTTTCA+GGG - chr8_1:51883923-51883942 Msa1199660:intron 40.0%
! ACGGTTCAATAAGTTGAACC+AGG - chr8_1:51884007-51884026 Msa1199660:intron 40.0%
GATCCTGTTATAATGTAGGG+TGG - chr8_1:51884055-51884074 Msa1199660:intron 40.0%
TGGCTGAATCAAGATTGAAC+CGG - chr8_1:51884075-51884094 Msa1199660:intron 40.0%
TAAAAGGAGGTCTAAACCAG+GGG + chr8_1:51884362-51884381 None:intergenic 40.0%
! AGTGCTTAGCCTTTAAAAGG+AGG + chr8_1:51884375-51884394 None:intergenic 40.0%
CATGATAAAAGGAGGGTTCA+AGG + chr8_1:51884592-51884611 None:intergenic 40.0%
AACATCACCTCACACTTTCA+AGG + chr8_1:51884670-51884689 None:intergenic 40.0%
ACTAACCAAAGACACGTTTG+AGG + chr8_1:51884735-51884754 None:intergenic 40.0%
CAAACGTGTCTTTGGTTAGT+TGG - chr8_1:51884735-51884754 Msa1199660:intron 40.0%
! GTGTCTTTGGTTAGTTGGTT+TGG - chr8_1:51884740-51884759 Msa1199660:intron 40.0%
TGGTCTTTCGTTAGTCAGTT+CGG - chr8_1:51884760-51884779 Msa1199660:intron 40.0%
!! CAAGATTATAAGGGTGTTCG+CGG - chr8_1:51884805-51884824 Msa1199660:intron 40.0%
!!! GATTGGATTGGTTCGGTTTT+GGG - chr8_1:51884827-51884846 Msa1199660:intron 40.0%
ACCATCCAATCCAATCTCTT+CGG - chr8_1:51884857-51884876 Msa1199660:intron 40.0%
CAAAACCGAAGAGATTGGAT+TGG + chr8_1:51884865-51884884 None:intergenic 40.0%
GTTAGATTTGTGAGTGTGCT+TGG - chr8_1:51885401-51885420 Msa1199660:intron 40.0%
!! TGGAATTATGCTTCTGAGAC+TGG - chr8_1:51885481-51885500 Msa1199660:intron 40.0%
!! ATTATGCTTCTGAGACTGGA+CGG - chr8_1:51885485-51885504 Msa1199660:intron 40.0%
CAATTTCAGGAGGTGAAATC+GGG + chr8_1:51885530-51885549 None:intergenic 40.0%
CCAATTTCAGGAGGTGAAAT+CGG + chr8_1:51885531-51885550 None:intergenic 40.0%
ATTGCTGAACCAATTTCAGG+AGG + chr8_1:51885540-51885559 None:intergenic 40.0%
CCGAAAAGTTTGGTACAAGA+AGG - chr8_1:51885621-51885640 Msa1199660:CDS 40.0%
CTGCAAGATCAAGAACTTGA+AGG - chr8_1:51885711-51885730 Msa1199660:CDS 40.0%
! TCAAGAACTTGAAGGTGTAC+AGG - chr8_1:51885719-51885738 Msa1199660:exon 40.0%
! CAAGAACTTGAAGGTGTACA+GGG - chr8_1:51885720-51885739 Msa1199660:exon 40.0%
CATGAATTGTACCATAGAGC+TGG - chr8_1:51885761-51885780 Msa1199660:five_prime_UTR 40.0%
GCCTTCCTTAAATTGCAACA+AGG - chr8_1:51885930-51885949 Msa1199660:five_prime_UTR 40.0%
! GCCTTGTTGCAATTTAAGGA+AGG + chr8_1:51885934-51885953 None:intergenic 40.0%
! CCATGCCTTGTTGCAATTTA+AGG + chr8_1:51885938-51885957 None:intergenic 40.0%
CCTTAAATTGCAACAAGGCA+TGG - chr8_1:51885935-51885954 Msa1199660:five_prime_UTR 40.0%
AATGTCAATGCCGTGTGATT+TGG + chr8_1:51886167-51886186 None:intergenic 40.0%
AGTCCAATCCAATGCACTTT+CGG + chr8_1:51886346-51886365 None:intergenic 40.0%
! TGTTTCATGTGATTGGCTAG+GGG + chr8_1:51886375-51886394 None:intergenic 40.0%
GGGACATGATATATTGCTGA+AGG + chr8_1:51886480-51886499 None:intergenic 40.0%
TGTCCCCCTGATCAAAAAAT+CGG - chr8_1:51886494-51886513 Msa1199660:five_prime_UTR 40.0%
!!! TGGACCGATTTTTTGATCAG+GGG + chr8_1:51886501-51886520 None:intergenic 40.0%
!!! GTGGACCGATTTTTTGATCA+GGG + chr8_1:51886502-51886521 None:intergenic 40.0%
!!! TGTGGACCGATTTTTTGATC+AGG + chr8_1:51886503-51886522 None:intergenic 40.0%
TAGGCACATTCACAACTTTG+TGG + chr8_1:51886521-51886540 None:intergenic 40.0%
GAATGTGCCTATCCATATCA+AGG - chr8_1:51886530-51886549 Msa1199660:five_prime_UTR 40.0%
AGAGAAGATGGAAAAGAGCA+AGG - chr8_1:51886697-51886716 Msa1199660:five_prime_UTR 40.0%
! AAGAGCAAGGTTCTAGTAGT+TGG - chr8_1:51886710-51886729 Msa1199660:five_prime_UTR 40.0%
! GTGAAGGCAAGTTTAGAACA+AGG - chr8_1:51886761-51886780 Msa1199660:five_prime_UTR 40.0%
! CTTTAGAAGGAGGAGTGAAT+TGG + chr8_1:51887148-51887167 None:intergenic 40.0%
CAATTCACTCCTCCTTCTAA+AGG - chr8_1:51887146-51887165 Msa1199660:five_prime_UTR 40.0%
GTTGCTTGTGATCCTTTAGA+AGG + chr8_1:51887161-51887180 None:intergenic 40.0%
TGCTCAGTTTACATTGGATG+AGG + chr8_1:51887703-51887722 None:intergenic 40.0%
GAAGCATGCTCAGTTTACAT+TGG + chr8_1:51887709-51887728 None:intergenic 40.0%
TCACAACGATCACAAAGCAA+TGG + chr8_1:51887955-51887974 None:intergenic 40.0%
GATAATCGGCGTATCAAAGA+TGG + chr8_1:51887981-51888000 None:intergenic 40.0%
! TCTTTGATACGCCGATTATC+GGG - chr8_1:51887981-51888000 Msa1199660:five_prime_UTR 40.0%
TCGACAAAGATCCCGATAAT+CGG + chr8_1:51887995-51888014 None:intergenic 40.0%
! CGCATTTTCTTCGTATCTGA+AGG - chr8_1:51888034-51888053 Msa1199660:five_prime_UTR 40.0%
GCCATTGAAGTAACAACAGT+TGG - chr8_1:51888113-51888132 Msa1199660:five_prime_UTR 40.0%
TAACAACAGTTGGATGGAGA+GGG - chr8_1:51888123-51888142 Msa1199660:five_prime_UTR 40.0%
AGACTGAAACCCTGCAAATT+GGG - chr8_1:51888163-51888182 Msa1199660:five_prime_UTR 40.0%
AGTCAAAACCCCAATTTGCA+GGG + chr8_1:51888175-51888194 None:intergenic 40.0%
!! CCAAACTTATCGGTTTGGTT+CGG + chr8_1:51888839-51888858 None:intergenic 40.0%
CCAAACCGATAAGTTTGGTT+CGG - chr8_1:51888841-51888860 Msa1199660:five_prime_UTR 40.0%
!! TTCATCGGTTTGGTTTGGTT+CGG + chr8_1:51888892-51888911 None:intergenic 40.0%
!! AAACCTTCATCGGTTTGGTT+TGG + chr8_1:51888897-51888916 None:intergenic 40.0%
CAAACCGATGAAGGTTTCAT+CGG - chr8_1:51888900-51888919 Msa1199660:five_prime_UTR 40.0%
TGAACCGATGAAACCTTCAT+CGG + chr8_1:51888907-51888926 None:intergenic 40.0%
AAAACGGAGTAGGTACTTAG+TGG + chr8_1:51889002-51889021 None:intergenic 40.0%
! ACTAAGTACCTACTCCGTTT+TGG - chr8_1:51889001-51889020 Msa1199660:five_prime_UTR 40.0%
AACGAGATGTGACCTTGATA+CGG + chr8_1:51889038-51889057 None:intergenic 40.0%
GGTGGAGGGAAAGAAAAAAA+TGG + chr8_1:51889138-51889157 None:intergenic 40.0%
!!! ACTTTTTGGGTTTTTGGAGG+TGG + chr8_1:51889156-51889175 None:intergenic 40.0%
CCTGACGATTTGCAATGATT+TGG + chr8_1:51889206-51889225 None:intergenic 40.0%
CCAAATCATTGCAAATCGTC+AGG - chr8_1:51889203-51889222 Msa1199660:five_prime_UTR 40.0%
CTCATCAAGCATCAAAGAAC+AGG - chr8_1:51889241-51889260 Msa1199660:five_prime_UTR 40.0%
ACGAACCAACCAGTAAAACA+AGG + chr8_1:51889296-51889315 None:intergenic 40.0%
ACGCAACACTTACAACTAAC+AGG + chr8_1:51889361-51889380 None:intergenic 40.0%
! TTCACAGGAAGCTTTGCTTT+TGG + chr8_1:51889592-51889611 None:intergenic 40.0%
GTGACAAATGTGAGCTTGAA+AGG + chr8_1:51889697-51889716 None:intergenic 40.0%
! GAGGGCTGAAAAGTTTTACT+TGG + chr8_1:51889722-51889741 None:intergenic 40.0%
! AAAACTTTTCAGCCCTCACA+TGG - chr8_1:51889725-51889744 Msa1199660:five_prime_UTR 40.0%
TGTGTATGAGTACCATGTGA+GGG + chr8_1:51889740-51889759 None:intergenic 40.0%
ATGTGTATGAGTACCATGTG+AGG + chr8_1:51889741-51889760 None:intergenic 40.0%
CTCGACAGAAATTTCTTGAC+AGG - chr8_1:51890283-51890302 Msa1199660:five_prime_UTR 40.0%
CAGAAATTTCTTGACAGGAG+AGG - chr8_1:51890288-51890307 Msa1199660:five_prime_UTR 40.0%
CTAAGGTTGCTGAGATTTGA+AGG + chr8_1:51890316-51890335 None:intergenic 40.0%
! ACAATTCGGTGATGTTGCTA+AGG + chr8_1:51890333-51890352 None:intergenic 40.0%
!! ATACAGTGTCACTTCATTCC+AGG - chr8_1:51890415-51890434 Msa1199660:five_prime_UTR 40.0%
ACTGTTGTGTGCTAAATTCC+TGG + chr8_1:51890436-51890455 None:intergenic 40.0%
TTAGCACACAACAGTTTGTC+AGG - chr8_1:51890441-51890460 Msa1199660:five_prime_UTR 40.0%
GGTTAGCACATTTCAATTGG+TGG - chr8_1:51890606-51890625 Msa1199660:five_prime_UTR 40.0%
GGTTAATGAAGCAATCATGG+TGG + chr8_1:51890685-51890704 None:intergenic 40.0%
GTTAACCCCTTCCTAATTCA+TGG + chr8_1:51890706-51890725 None:intergenic 40.0%
!! TGGAGCTTTTGATGGATCAA+AGG + chr8_1:51891030-51891049 None:intergenic 40.0%
!!! GGACTGCTGAATAGTTTTGA+TGG + chr8_1:51891216-51891235 None:intergenic 40.0%
AAATCCACAAGCTTCAACTG+AGG + chr8_1:51891394-51891413 None:intergenic 40.0%
CGAAGGTTACTGATGAAATC+TGG + chr8_1:51891426-51891445 None:intergenic 40.0%
GGGTTCTATCTCTCCACAAT+TGG - chr8_1:51883425-51883444 Msa1199660:CDS 45.0%
!! CACTGTTTCAGGATTTTGGC+TGG - chr8_1:51883556-51883575 Msa1199660:intron 45.0%
GATCCCCCAATCTATATGGT+CGG + chr8_1:51883918-51883937 None:intergenic 45.0%
GATCAAACCAATGGGCGAAT+TGG + chr8_1:51884039-51884058 None:intergenic 45.0%
CAGCCACCCTACATTATAAC+AGG + chr8_1:51884061-51884080 None:intergenic 45.0%
CTGATTGAACCAATGATCGG+AGG - chr8_1:51884103-51884122 Msa1199660:intron 45.0%
! ACCAATGATCGGAGGTTTTG+CGG - chr8_1:51884111-51884130 Msa1199660:intron 45.0%
TGCGGATTTGATCTCCAGTT+CGG - chr8_1:51884129-51884148 Msa1199660:intron 45.0%
TTGGAGAGTTTCCCCAATGA+AGG + chr8_1:51884274-51884293 None:intergenic 45.0%
GGAGATCTCTCTCCTAGTAT+CGG + chr8_1:51884496-51884515 None:intergenic 45.0%
GATTTGAGTGACCAGAGTGA+TGG + chr8_1:51884533-51884552 None:intergenic 45.0%
GTGATGTTGCGATAGTCTCT+TGG - chr8_1:51884682-51884701 Msa1199660:intron 45.0%
!! TTATAAGGGTGTTCGCGGAT+TGG - chr8_1:51884810-51884829 Msa1199660:intron 45.0%
!!! GGATTGGATTGGTTCGGTTT+TGG - chr8_1:51884826-51884845 Msa1199660:intron 45.0%
! ACCGAAGAGATTGGATTGGA+TGG + chr8_1:51884861-51884880 None:intergenic 45.0%
CCGATTTCACCTCCTGAAAT+TGG - chr8_1:51885528-51885547 Msa1199660:intron 45.0%
ATCCATAGACTGCTGCTCAT+GGG + chr8_1:51885845-51885864 None:intergenic 45.0%
! ACCTGAGTTGCTGTGCATTT+TGG - chr8_1:51886242-51886261 Msa1199660:five_prime_UTR 45.0%
ACCAAAATGCACAGCAACTC+AGG + chr8_1:51886246-51886265 None:intergenic 45.0%
! TGTCCGAAAGTGCATTGGAT+TGG - chr8_1:51886340-51886359 Msa1199660:five_prime_UTR 45.0%
!!! GGACCGATTTTTTGATCAGG+GGG + chr8_1:51886500-51886519 None:intergenic 45.0%
TGGGAGAAAAACAAGCCTTC+TGG - chr8_1:51886629-51886648 Msa1199660:five_prime_UTR 45.0%
TTTGGAGGAATGGTACCAGA+AGG + chr8_1:51886647-51886666 None:intergenic 45.0%
! AGCAAGGTTCTAGTAGTTGG+AGG - chr8_1:51886713-51886732 Msa1199660:five_prime_UTR 45.0%
GTTCTAGTAGTTGGAGGAAC+AGG - chr8_1:51886719-51886738 Msa1199660:five_prime_UTR 45.0%
GTTGGAGGAACAGGATACAT+AGG - chr8_1:51886728-51886747 Msa1199660:five_prime_UTR 45.0%
TTCGTTCTTAGTGTCTGCTG+TGG + chr8_1:51887062-51887081 None:intergenic 45.0%
CCAAAAACTACGTGCTCTTG+AGG + chr8_1:51887119-51887138 None:intergenic 45.0%
!! CCTCAAGAGCACGTAGTTTT+TGG - chr8_1:51887116-51887135 Msa1199660:five_prime_UTR 45.0%
! GCTTGTGATCCTTTAGAAGG+AGG + chr8_1:51887158-51887177 None:intergenic 45.0%
AACTGGTGATCGACATATCC+AGG - chr8_1:51887555-51887574 Msa1199660:five_prime_UTR 45.0%
TGCCCTGACTCAAATTGCAA+CGG + chr8_1:51887625-51887644 None:intergenic 45.0%
GCAACAACGAATTGTAGCAG+AGG + chr8_1:51887670-51887689 None:intergenic 45.0%
TGCTACAATTCGTTGTTGCC+TGG - chr8_1:51887671-51887690 Msa1199660:five_prime_UTR 45.0%
CATTGGATGAGGAATCTTCC+AGG + chr8_1:51887692-51887711 None:intergenic 45.0%
AGATAAGCGATTCCCCAGAT+TGG - chr8_1:51887770-51887789 Msa1199660:five_prime_UTR 45.0%
TGGTGGTTGGATCGATCATT+TGG + chr8_1:51887811-51887830 None:intergenic 45.0%
AATGATCGATCCAACCACCA+CGG - chr8_1:51887811-51887830 Msa1199660:five_prime_UTR 45.0%
CAATGCCTATGGAATACCGT+CGG + chr8_1:51888063-51888082 None:intergenic 45.0%
!! TATTCCATAGGCATTGAGCC+TGG - chr8_1:51888067-51888086 Msa1199660:five_prime_UTR 45.0%
GTAACAACAGTTGGATGGAG+AGG - chr8_1:51888122-51888141 Msa1199660:five_prime_UTR 45.0%
CAGACTGAAACCCTGCAAAT+TGG - chr8_1:51888162-51888181 Msa1199660:five_prime_UTR 45.0%
GACTGAAACCCTGCAAATTG+GGG - chr8_1:51888164-51888183 Msa1199660:five_prime_UTR 45.0%
GAGTCAAAACCCCAATTTGC+AGG + chr8_1:51888176-51888195 None:intergenic 45.0%
!! TTTGGATTGGTTCGGCTGAT+CGG + chr8_1:51888816-51888835 None:intergenic 45.0%
!! TGGTTCGGTTTGGATTGGTT+CGG + chr8_1:51888824-51888843 None:intergenic 45.0%
!! CTTATCGGTTTGGTTCGGTT+TGG + chr8_1:51888834-51888853 None:intergenic 45.0%
CCGAACCAAACCGATAAGTT+TGG - chr8_1:51888836-51888855 Msa1199660:five_prime_UTR 45.0%
! CCGAACCAAACTTATCGGTT+TGG + chr8_1:51888844-51888863 None:intergenic 45.0%
GAACCAAACCAAACCGATGA+AGG - chr8_1:51888891-51888910 Msa1199660:five_prime_UTR 45.0%
! CGATGAAACCTTCATCGGTT+TGG + chr8_1:51888902-51888921 None:intergenic 45.0%
!! TGTAACGGTTCGGTTTGGAT+TGG + chr8_1:51888950-51888969 None:intergenic 45.0%
TGACAGTTCCAAAACGGAGT+AGG + chr8_1:51889012-51889031 None:intergenic 45.0%
!!! GCTAGATTTTGAGACGAGGA+GGG + chr8_1:51889099-51889118 None:intergenic 45.0%
!!! TGCTAGATTTTGAGACGAGG+AGG + chr8_1:51889100-51889119 None:intergenic 45.0%
TCCTCGTCTCAAAATCTAGC+AGG - chr8_1:51889099-51889118 Msa1199660:five_prime_UTR 45.0%
!! TTTGGGTTTTTGGAGGTGGA+GGG + chr8_1:51889152-51889171 None:intergenic 45.0%
!!! TTTTGGGTTTTTGGAGGTGG+AGG + chr8_1:51889153-51889172 None:intergenic 45.0%
!!! CGCACTTTTTGGGTTTTTGG+AGG + chr8_1:51889159-51889178 None:intergenic 45.0%
TATGGTTGAAAATGTGGCGG+AGG - chr8_1:51889545-51889564 Msa1199660:five_prime_UTR 45.0%
! ATGGTTGAAAATGTGGCGGA+GGG - chr8_1:51889546-51889565 Msa1199660:five_prime_UTR 45.0%
!!! GCTTTGCTTTTGGCTGGTTT+CGG + chr8_1:51889582-51889601 None:intergenic 45.0%
AAAGCTTCCTGTGAAGCTTC+CGG - chr8_1:51889597-51889616 Msa1199660:five_prime_UTR 45.0%
!! TTTGGTTGGTTTGACATCGC+CGG + chr8_1:51889649-51889668 None:intergenic 45.0%
!! GGGAGTATCCCTTCTACAAT+AGG - chr8_1:51890103-51890122 Msa1199660:five_prime_UTR 45.0%
!! AGGACTAGTTCAGACAGTTG+AGG - chr8_1:51890123-51890142 Msa1199660:five_prime_UTR 45.0%
! ATGGAGTTTGGAGCACTTGA+AGG - chr8_1:51891183-51891202 Msa1199660:five_prime_UTR 45.0%
TTGTCCTCAGTTGAAGCTTG+TGG - chr8_1:51891387-51891406 Msa1199660:five_prime_UTR 45.0%
!!! ATATTTATTTATTTTAAATG+TGG + chr8_1:51888245-51888264 None:intergenic 5.0%
TCGCGGCTAATTACATTCGG+TGG + chr8_1:51883829-51883848 None:intergenic 50.0%
GAACTAGCCAATTCGCCCAT+TGG - chr8_1:51884029-51884048 Msa1199660:intron 50.0%
TCCGCAAAACCTCCGATCAT+TGG + chr8_1:51884115-51884134 None:intergenic 50.0%
GAGAGTTTCCCCAATGAAGG+AGG + chr8_1:51884271-51884290 None:intergenic 50.0%
TAGGAGAGAGATCTCCTCGA+AGG - chr8_1:51884500-51884519 Msa1199660:CDS 50.0%
AAGGAGGGTTCAAGGGTAGA+GGG + chr8_1:51884584-51884603 None:intergenic 50.0%
AAAGGAGGGTTCAAGGGTAG+AGG + chr8_1:51884585-51884604 None:intergenic 50.0%
!! GTTCGCGGATTGGATTGGTT+CGG - chr8_1:51884820-51884839 Msa1199660:intron 50.0%
!!! TGGATTGGTTCGGTTTTGGG+AGG - chr8_1:51884830-51884849 Msa1199660:intron 50.0%
GAAAGGTCGCCTATCCTAGA+TGG - chr8_1:51885662-51885681 Msa1199660:CDS 50.0%
CTTAGTAGCAGCCAGCTCTA+TGG + chr8_1:51885775-51885794 None:intergenic 50.0%
ATAGACTGCTGCTCATGGGA+TGG + chr8_1:51885841-51885860 None:intergenic 50.0%
ATCCCATGAGCAGCAGTCTA+TGG - chr8_1:51885840-51885859 Msa1199660:five_prime_UTR 50.0%
CATCCATAGACTGCTGCTCA+TGG + chr8_1:51885846-51885865 None:intergenic 50.0%
!!! GCTTGCTGGTTTTGGTTAGC+AGG + chr8_1:51887040-51887059 None:intergenic 50.0%
! TCGACATATCCAGGTTGACC+AGG - chr8_1:51887564-51887583 Msa1199660:five_prime_UTR 50.0%
! CGACATATCCAGGTTGACCA+GGG - chr8_1:51887565-51887584 Msa1199660:five_prime_UTR 50.0%
! ATCCAGGTTGACCAGGGAAA+CGG - chr8_1:51887571-51887590 Msa1199660:five_prime_UTR 50.0%
TGGCCGTTGCAATTTGAGTC+AGG - chr8_1:51887619-51887638 Msa1199660:five_prime_UTR 50.0%
GGCCGTTGCAATTTGAGTCA+GGG - chr8_1:51887620-51887639 Msa1199660:five_prime_UTR 50.0%
TGCAATTTGAGTCAGGGCAG+CGG - chr8_1:51887626-51887645 Msa1199660:five_prime_UTR 50.0%
ATTCCCCAGATTGGAGACGA+TGG - chr8_1:51887779-51887798 Msa1199660:five_prime_UTR 50.0%
GAACCATCGTCTCCAATCTG+GGG + chr8_1:51887785-51887804 None:intergenic 50.0%
CGAACCATCGTCTCCAATCT+GGG + chr8_1:51887786-51887805 None:intergenic 50.0%
AAAGCTCTATCGTTCCGTGG+TGG + chr8_1:51887828-51887847 None:intergenic 50.0%
TGCAAAGCTCTATCGTTCCG+TGG + chr8_1:51887831-51887850 None:intergenic 50.0%
! TTGGATGGAGAGGGCGATTT+TGG - chr8_1:51888132-51888151 Msa1199660:five_prime_UTR 50.0%
! TGGATGGAGAGGGCGATTTT+GGG - chr8_1:51888133-51888152 Msa1199660:five_prime_UTR 50.0%
!! CGGTTTGGTTCGGTTTGGAT+TGG + chr8_1:51888829-51888848 None:intergenic 50.0%
TTTCGTCAAGCTGGTGCGTA+GGG + chr8_1:51888974-51888993 None:intergenic 50.0%
!! GTGGTTTGCTTTCGTCAAGC+TGG + chr8_1:51888983-51889002 None:intergenic 50.0%
CGGCAGTGACAGTTCCAAAA+CGG + chr8_1:51889018-51889037 None:intergenic 50.0%
GAACTGTCACTGCCGTATCA+AGG - chr8_1:51889023-51889042 Msa1199660:five_prime_UTR 50.0%
!!! GCCTGCTAGATTTTGAGACG+AGG + chr8_1:51889103-51889122 None:intergenic 50.0%
TTGCGTGAGTTAACTCACGC+AGG - chr8_1:51889375-51889394 Msa1199660:five_prime_UTR 50.0%
TAGCGTGACTTAAGTCACGC+TGG + chr8_1:51889410-51889429 None:intergenic 50.0%
!! CAGGAAGCTTTGCTTTTGGC+TGG + chr8_1:51889588-51889607 None:intergenic 50.0%
! TTGGCTGGTTGCAGCTTCAG+TGG - chr8_1:51883571-51883590 Msa1199660:CDS 55.0%
! TGGGCGAATTGGCTAGTTCC+TGG + chr8_1:51884028-51884047 None:intergenic 55.0%
GGGTTGTGGAGGTTGAGACT+GGG + chr8_1:51884342-51884361 None:intergenic 55.0%
GTCTAAACCAGGGGTTGTGG+AGG + chr8_1:51884353-51884372 None:intergenic 55.0%
GAGGTCTAAACCAGGGGTTG+TGG + chr8_1:51884356-51884375 None:intergenic 55.0%
AAGGCTCAGAGCCATCACTC+TGG - chr8_1:51884519-51884538 Msa1199660:intron 55.0%
AGGAGGGTTCAAGGGTAGAG+GGG + chr8_1:51884583-51884602 None:intergenic 55.0%
!! AGGGTGTTCGCGGATTGGAT+TGG - chr8_1:51884815-51884834 Msa1199660:intron 55.0%
!!! CTGCTGTGGCTTGCTGGTTT+TGG + chr8_1:51887048-51887067 None:intergenic 55.0%
! TAGTGTCTGCTGTGGCTTGC+TGG + chr8_1:51887054-51887073 None:intergenic 55.0%
TACCGTTTCCCTGGTCAACC+TGG + chr8_1:51887576-51887595 None:intergenic 55.0%
!! GCGTCCTCGCATGTTGTTTC+TGG - chr8_1:51887599-51887618 Msa1199660:five_prime_UTR 55.0%
ACGGCCAGAAACAACATGCG+AGG + chr8_1:51887606-51887625 None:intergenic 55.0%
GCGAACCATCGTCTCCAATC+TGG + chr8_1:51887787-51887806 None:intergenic 55.0%
CTCTATCGTTCCGTGGTGGT+TGG + chr8_1:51887824-51887843 None:intergenic 55.0%
!! TCGTATCTGAAGGGTGCCGA+CGG - chr8_1:51888044-51888063 Msa1199660:five_prime_UTR 55.0%
TTGGCCAGGCTCAATGCCTA+TGG + chr8_1:51888074-51888093 None:intergenic 55.0%
!! ATAGGCATTGAGCCTGGCCA+AGG - chr8_1:51888073-51888092 Msa1199660:five_prime_UTR 55.0%
GGCAATCACTCAGCCTACCT+TGG + chr8_1:51888093-51888112 None:intergenic 55.0%
! GGATGGAGAGGGCGATTTTG+GGG - chr8_1:51888134-51888153 Msa1199660:five_prime_UTR 55.0%
!! AGGGGTGTAACGGTTCGGTT+TGG + chr8_1:51888955-51888974 None:intergenic 55.0%
! TGCGTAGGGGTGTAACGGTT+CGG + chr8_1:51888960-51888979 None:intergenic 55.0%
TTCGTCAAGCTGGTGCGTAG+GGG + chr8_1:51888973-51888992 None:intergenic 55.0%
CTTTCGTCAAGCTGGTGCGT+AGG + chr8_1:51888975-51888994 None:intergenic 55.0%
CTTGTGCGGCAAGCAAAGCA+AGG + chr8_1:51889473-51889492 None:intergenic 55.0%
! GTTGAAAATGTGGCGGAGGG+TGG - chr8_1:51889549-51889568 Msa1199660:five_prime_UTR 55.0%
TCCTGTGAAGCTTCCGGCAT+AGG - chr8_1:51889603-51889622 Msa1199660:five_prime_UTR 55.0%
! GTAGGTTCTGGCGTAGCATC+CGG - chr8_1:51889627-51889646 Msa1199660:five_prime_UTR 55.0%
GTGGAGGTTGAGACTGGGAG+AGG + chr8_1:51884337-51884356 None:intergenic 60.0%
GGGGTTGTGGAGGTTGAGAC+TGG + chr8_1:51884343-51884362 None:intergenic 60.0%
GTCTCAACCTCCACAACCCC+TGG - chr8_1:51884343-51884362 Msa1199660:CDS 60.0%
!! GTGATGGCTCTGAGCCTTCG+AGG + chr8_1:51884517-51884536 None:intergenic 60.0%
GGAGGGTTCAAGGGTAGAGG+GGG + chr8_1:51884582-51884601 None:intergenic 60.0%
GGACGCATGTACCGTTTCCC+TGG + chr8_1:51887585-51887604 None:intergenic 60.0%
!! GGGTGCCGACGGTATTCCAT+AGG - chr8_1:51888055-51888074 Msa1199660:five_prime_UTR 60.0%
GCATTGAGCCTGGCCAAGGT+AGG - chr8_1:51888077-51888096 Msa1199660:five_prime_UTR 60.0%
TCACTCAGCCTACCTTGGCC+AGG + chr8_1:51888088-51888107 None:intergenic 60.0%
! GCTGGTGCGTAGGGGTGTAA+CGG + chr8_1:51888965-51888984 None:intergenic 60.0%
GCCTATGCCGGAAGCTTCAC+AGG + chr8_1:51889607-51889626 None:intergenic 60.0%
GAAGCTTCCGGCATAGGCGT+AGG - chr8_1:51889609-51889628 Msa1199660:five_prime_UTR 60.0%
TCCGGCATAGGCGTAGGTTC+TGG - chr8_1:51889615-51889634 Msa1199660:five_prime_UTR 60.0%
GCCAGAACCTACGCCTATGC+CGG + chr8_1:51889619-51889638 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 51883354 51891456 51883354 ID=Msa1199660;Name=Msa1199660
chr8_1 mRNA 51883354 51891456 51883354 ID=Msa1199660-mRNA-1;Parent=Msa1199660;Name=Msa1199660-mRNA-1;_AED=0.24;_eAED=0.24;_QI=5147|0.87|0.88|1|0.87|0.77|9|0|274
chr8_1 exon 51883354 51883474 51883354 ID=Msa1199660-mRNA-1:exon:16493;Parent=Msa1199660-mRNA-1
chr8_1 exon 51883560 51883631 51883560 ID=Msa1199660-mRNA-1:exon:16492;Parent=Msa1199660-mRNA-1
chr8_1 exon 51883726 51883800 51883726 ID=Msa1199660-mRNA-1:exon:16491;Parent=Msa1199660-mRNA-1
chr8_1 exon 51884305 51884373 51884305 ID=Msa1199660-mRNA-1:exon:16490;Parent=Msa1199660-mRNA-1
chr8_1 exon 51884460 51884531 51884460 ID=Msa1199660-mRNA-1:exon:16489;Parent=Msa1199660-mRNA-1
chr8_1 exon 51885050 51885276 51885050 ID=Msa1199660-mRNA-1:exon:16488;Parent=Msa1199660-mRNA-1
chr8_1 exon 51885548 51890628 51885548 ID=Msa1199660-mRNA-1:exon:16487;Parent=Msa1199660-mRNA-1
chr8_1 exon 51891108 51891243 51891108 ID=Msa1199660-mRNA-1:exon:16486;Parent=Msa1199660-mRNA-1
chr8_1 exon 51891338 51891456 51891338 ID=Msa1199660-mRNA-1:exon:16485;Parent=Msa1199660-mRNA-1
chr8_1 five_prime_UTR 51891338 51891456 51891338 ID=Msa1199660-mRNA-1:five_prime_utr;Parent=Msa1199660-mRNA-1
chr8_1 five_prime_UTR 51891108 51891243 51891108 ID=Msa1199660-mRNA-1:five_prime_utr;Parent=Msa1199660-mRNA-1
chr8_1 five_prime_UTR 51885737 51890628 51885737 ID=Msa1199660-mRNA-1:five_prime_utr;Parent=Msa1199660-mRNA-1
chr8_1 CDS 51885548 51885736 51885548 ID=Msa1199660-mRNA-1:cds;Parent=Msa1199660-mRNA-1
chr8_1 CDS 51885050 51885276 51885050 ID=Msa1199660-mRNA-1:cds;Parent=Msa1199660-mRNA-1
chr8_1 CDS 51884460 51884531 51884460 ID=Msa1199660-mRNA-1:cds;Parent=Msa1199660-mRNA-1
chr8_1 CDS 51884305 51884373 51884305 ID=Msa1199660-mRNA-1:cds;Parent=Msa1199660-mRNA-1
chr8_1 CDS 51883726 51883800 51883726 ID=Msa1199660-mRNA-1:cds;Parent=Msa1199660-mRNA-1
chr8_1 CDS 51883560 51883631 51883560 ID=Msa1199660-mRNA-1:cds;Parent=Msa1199660-mRNA-1
chr8_1 CDS 51883354 51883474 51883354 ID=Msa1199660-mRNA-1:cds;Parent=Msa1199660-mRNA-1
Gene Sequence

>Msa1199660

ATGCTATTTAGAGGACTACTCTCCCTCCTCGTCTCAAAATCTAGCAGGCAACCACACAACTCCATTTTTTTCTTTCCCTCCACCTCCAAAAACCCAAAAAGTGCGAATTTTTGGGTCAAAATCTTTGTTCCAAATCATTGCAAATCGTCAGGAAGCAAGTTTCTACGCTCATCAAGCATCAAAGAACAGACATTGAGTGATATGGTTGAAAATGTGGCGGAGGGTGGTGTTGAACCGAAACCAGCCAAAAGCAAAGCTTCCTGTGAAGCTTCCGGCATAGGCGTAGGTTCTGGCGTAGCATCCGGCGATGTCAAACCAACCAAAGATGTGAAGTTTAAAGTGAAAATTCCCTTTCAAGCTCACATTTGTCACGACCAAGTAAAACTTTTCAGCCCTCACATGGTACTCATACACATTCGGCTCGACAGAAATTTCTTGACAGGAGAGGTCCCTTCAAATCTCAGCAACCTTAGCAACATCACCGAATTGAATTTAGCACACAACAGTTTGTCAGGTCCTTTGCCAGACTTAACATCAATGGATAACCTCAATTATGTGGATCTTAGTAACAATTCCTTTGATCCATCAAAAGCTCCAATTTGGTTTTCAACTTTATCATCACTCACCACTCTTATTATGGAGTTTGGAGCACTTGAAGGTCCTCTTCCATCAAAACTATTCAGCAGTCCTCAAATACAGCAAGTGAAACTAAGAAGCAATGCACTGAACAAAACACTAAACATGAATGACAGCATTTGTCCTCAGTTGAAGCTTGTGGATTTACAAGACAACCAGATTTCATCAGTAACCTTCGGTTCACATTAA
Protein sequence

>Msa1199660

MLFRGLLSLLVSKSSRQPHNSIFFFPSTSKNPKSANFWVKIFVPNHCKSSGSKFLRSSSIKEQTLSDMVENVAEGGVEPKPAKSKASCEASGIGVGSGVASGDVKPTKDVKFKVKIPFQAHICHDQVKLFSPHMVLIHIRLDRNFLTGEVPSNLSNLSNITELNLAHNSLSGPLPDLTSMDNLNYVDLSNNSFDPSKAPIWFSTLSSLTTLIMEFGALEGPLPSKLFSSPQIQQVKLRSNALNKTLNMNDSICPQLKLVDLQDNQISSVTFGSH*