AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1394820

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1394820 MtrunA17_Chr8g0369211 70.760 171 26 1 128 274 211 381 8.52e-70 231
Msa1394820 MtrunA17_Chr8g0369221 49.029 206 69 4 39 211 116 318 2.01e-43 150
Msa1394820 MtrunA17_Chr2g0291501 51.562 128 62 0 139 266 246 373 2.14e-34 131
Msa1394820 MtrunA17_Chr2g0283111 38.406 138 59 2 139 274 248 361 3.67e-20 90.1
Msa1394820 MtrunA17_Chr2g0283061 37.162 148 71 2 127 274 183 308 5.96e-19 86.3
Msa1394820 MtrunA17_Chr4g0075441 60.606 66 14 2 68 131 1 56 1.76e-13 65.1
Msa1394820 MtrunA17_Chr4g0058861 38.636 132 78 3 139 268 248 378 1.36e-12 67.8
Msa1394820 MtrunA17_Chr5g0432871 32.639 144 77 5 139 270 229 364 1.78e-12 67.4
Msa1394820 MtrunA17_Chr1g0189871 34.586 133 85 2 136 267 458 589 2.68e-12 67.0
Msa1394820 MtrunA17_Chr5g0404961 36.620 142 81 3 136 274 152 287 3.78e-12 65.9
Msa1394820 MtrunA17_Chr2g0296591 35.455 110 69 2 138 246 601 709 4.33e-12 66.2
Msa1394820 MtrunA17_Chr2g0296601 35.455 110 69 2 138 246 601 709 4.85e-12 66.2
Msa1394820 MtrunA17_Chr1g0183231 29.851 134 92 2 136 268 406 538 7.58e-12 65.5
Msa1394820 MtrunA17_Chr4g0009791 35.537 121 75 3 127 246 41 159 9.33e-12 62.4
Msa1394820 MtrunA17_Chr8g0387791 38.889 108 63 2 139 246 92 196 9.55e-12 65.1
Msa1394820 MtrunA17_Chr1g0212351 32.836 134 88 2 135 267 161 293 2.08e-11 63.9
Msa1394820 MtrunA17_Chr4g0058761 32.836 134 88 2 136 268 457 589 2.09e-11 64.3
Msa1394820 MtrunA17_Chr4g0019801 30.178 169 85 3 139 274 316 484 2.93e-11 63.5
Msa1394820 MtrunA17_Chr3g0120441 33.824 136 86 4 133 267 73 205 3.32e-11 63.2
Msa1394820 MtrunA17_Chr7g0219371 35.099 151 95 3 124 272 242 391 4.17e-11 63.2
Msa1394820 MtrunA17_Chr5g0446871 33.846 130 84 2 139 267 336 464 4.32e-11 63.2
Msa1394820 MtrunA17_Chr7g0215681 31.818 132 88 2 136 266 135 265 7.13e-11 62.4
Msa1394820 MtrunA17_Chr4g0014151 33.051 118 77 2 130 246 399 515 8.13e-11 62.4
Msa1394820 MtrunA17_Chr4g0032101 32.298 161 100 4 115 267 294 453 9.63e-11 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1394820 AT1G79620.3 59.412 170 45 1 128 273 219 388 8.11e-60 202
Msa1394820 AT1G79620.4 59.412 170 45 1 128 273 219 388 1.10e-59 201
Msa1394820 AT1G79620.2 59.412 170 45 1 128 273 219 388 1.43e-59 202
Msa1394820 AT1G79620.1 59.412 170 45 1 128 273 219 388 2.33e-59 203
Msa1394820 AT1G79620.5 59.412 170 45 1 128 273 219 388 2.95e-59 203
Msa1394820 AT5G49770.1 40.854 164 73 1 128 267 215 378 4.93e-29 116
Msa1394820 AT5G49760.1 42.073 164 71 1 128 267 212 375 6.85e-25 104
Msa1394820 AT5G49750.1 33.929 168 87 1 124 267 265 432 3.40e-22 95.9
Msa1394820 AT5G49780.1 44.776 134 73 1 135 267 122 255 3.95e-20 90.5
Msa1394820 AT5G49780.3 44.776 134 73 1 135 267 243 376 4.96e-20 90.1
Msa1394820 AT5G49780.2 44.776 134 73 1 135 267 243 376 5.42e-20 90.1
Msa1394820 AT1G06840.1 32.192 146 81 4 136 270 229 367 2.59e-12 67.4
Msa1394820 AT5G48940.1 32.331 133 88 2 136 267 469 600 6.71e-12 66.2
Msa1394820 AT5G14210.1 31.081 148 82 1 139 266 194 341 6.98e-12 65.9
Msa1394820 AT5G14210.2 31.081 148 82 1 139 266 194 341 7.12e-12 65.9
Msa1394820 AT5G14210.3 31.081 148 82 1 139 266 194 341 7.84e-12 65.9
Msa1394820 AT1G75640.1 34.058 138 87 2 139 273 121 257 1.21e-11 65.5
Msa1394820 AT3G24240.1 33.083 133 87 2 136 267 468 599 1.39e-11 65.1
Msa1394820 AT2G26330.1 31.884 138 92 2 136 272 333 469 1.42e-11 65.1
Msa1394820 AT1G64210.1 38.532 109 63 3 139 246 93 198 2.30e-11 64.3
Msa1394820 AT5G25910.1 31.818 132 89 1 136 267 237 367 2.95e-11 63.9
Msa1394820 AT5G40170.1 33.846 130 60 2 139 267 144 248 5.95e-11 63.2
Msa1394820 AT5G65700.1 29.851 134 92 2 136 268 409 541 6.41e-11 63.2
Msa1394820 AT5G65700.2 29.851 134 92 2 136 268 409 541 6.41e-11 63.2
Msa1394820 AT5G63930.2 31.343 134 90 2 136 268 395 527 7.55e-11 62.8
Msa1394820 AT5G63930.1 31.343 134 90 2 136 268 459 591 7.71e-11 62.8

Find 325 sgRNAs with CRISPR-Local

Find 522 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCATGCCTTGTTGCAATTTA+AGG 0.066892 tig0021897:-25057 None:intergenic
AATTCTAAATCTATAGTTTA+TGG 0.086007 tig0021897:+27493 Msa1394820:five_prime_UTR
ACTTCACTGTTTCAGGATTT+TGG 0.119017 tig0021897:+22674 Msa1394820:intron
GCGTCCTCGCATGTTGTTTC+TGG 0.119405 tig0021897:+26721 Msa1394820:five_prime_UTR
CAATTCAAACCGAATAAATT+TGG 0.138275 tig0021897:-24066 None:intergenic
TTGGATGGAGAGGGCGATTT+TGG 0.146812 tig0021897:+27254 Msa1394820:five_prime_UTR
CACATCTTATTGAATTATTC+AGG 0.157540 tig0021897:+23334 Msa1394820:five_prime_UTR
ACCCATTAAACCTTTATTAA+AGG 0.167669 tig0021897:-22528 None:intergenic
GTCCTTTAATAAAGGTTTAA+TGG 0.184785 tig0021897:+22526 Msa1394820:five_prime_UTR
GGAAACTCTCCAAACTTTAT+TGG 0.187337 tig0021897:+23403 Msa1394820:five_prime_UTR
CCGATTTCACCTCCTGAAAT+TGG 0.198819 tig0021897:+24650 Msa1394820:five_prime_UTR
TCCATGATCTATTAGTATTA+TGG 0.199456 tig0021897:+30286 Msa1394820:intron
GGATTGGATTGGTTCGGTTT+TGG 0.213526 tig0021897:+23948 Msa1394820:five_prime_UTR
CTAAGCACTTGTGAGTATTT+TGG 0.215999 tig0021897:+23508 Msa1394820:five_prime_UTR
AATTTCACTGAGAACAAAAT+TGG 0.222803 tig0021897:+26979 Msa1394820:five_prime_UTR
CACTTTAAACTTCACATCTT+TGG 0.229250 tig0021897:-28786 None:intergenic
CTGCTGTGGCTTGCTGGTTT+TGG 0.230069 tig0021897:-26167 None:intergenic
CAGACTGAAACCCTGCAAAT+TGG 0.232924 tig0021897:+27284 Msa1394820:five_prime_UTR
ATTCACTTGAAAAGAGCTTA+TGG 0.252207 tig0021897:+25731 Msa1394820:five_prime_UTR
TGACACTTTGACTGAGTTAA+AGG 0.260060 tig0021897:+25092 Msa1394820:five_prime_UTR
ATCCATCAAAAGCTCCAATT+TGG 0.262634 tig0021897:+30155 Msa1394820:CDS
AAAACACACTCAAGATTATA+AGG 0.268242 tig0021897:+23917 Msa1394820:five_prime_UTR
GAGTAGTTAGCTTGTTAGTT+AGG 0.270116 tig0021897:-23746 None:intergenic
ACAAGTGCTTAGCCTTTAAA+AGG 0.271696 tig0021897:-23497 None:intergenic
CTCTTGAGGTTATATAGTTT+TGG 0.272078 tig0021897:-26224 None:intergenic
TATAAATTGTTTCATGTGAT+TGG 0.283449 tig0021897:-25501 None:intergenic
TTTAAAACATCATGAAATTA+TGG 0.285251 tig0021897:-27576 None:intergenic
CAAATTTATTCGGTTTGAAT+TGG 0.285306 tig0021897:+24067 Msa1394820:five_prime_UTR
TAGTGTCTGCTGTGGCTTGC+TGG 0.287647 tig0021897:-26173 None:intergenic
CACACTTTCAAGGAACAAAA+TGG 0.291149 tig0021897:-23779 None:intergenic
ACCTGAGTTGCTGTGCATTT+TGG 0.291499 tig0021897:+25364 Msa1394820:five_prime_UTR
TCTATTAGTATTATGGAGTT+TGG 0.294515 tig0021897:+30293 Msa1394820:intron
ATCTTTGATACGCCGATTAT+CGG 0.298722 tig0021897:+27102 Msa1394820:five_prime_UTR
GTTTGAATTGGATTGGATTT+CGG 0.302900 tig0021897:+24079 Msa1394820:five_prime_UTR
TCCTTTAATAAAGGTTTAAT+GGG 0.314806 tig0021897:+22527 Msa1394820:five_prime_UTR
CCAATTTCAGGAGGTGAAAT+CGG 0.315645 tig0021897:-24650 None:intergenic
CCTGACGATTTGCAATGATT+TGG 0.317399 tig0021897:-28325 None:intergenic
AAGTACAACATTCCTTGATA+TGG 0.318099 tig0021897:-25664 None:intergenic
GATAAAGTTGAAAACCAAAT+TGG 0.319561 tig0021897:-30169 None:intergenic
GAAAGATCCCCTAATGTATC+TGG 0.319805 tig0021897:-22723 None:intergenic
TAATTGGGGTTCATCTAGTT+TGG 0.322079 tig0021897:+27528 Msa1394820:five_prime_UTR
GCAATATTCCAGATACATTA+GGG 0.323311 tig0021897:+22715 Msa1394820:five_prime_UTR
AATATTGCTGAACCAATTTC+AGG 0.323671 tig0021897:-24662 None:intergenic
CACGACCTATATTATATATA+TGG 0.324722 tig0021897:+27319 Msa1394820:five_prime_UTR
AGACTGAAACCCTGCAAATT+GGG 0.329444 tig0021897:+27285 Msa1394820:five_prime_UTR
CAAGGAATGTTGTACTTTAG+AGG 0.329662 tig0021897:+25670 Msa1394820:five_prime_UTR
AGGGATTTGTCCTTTAATAA+AGG 0.331632 tig0021897:+22518 Msa1394820:five_prime_UTR
GATCGGTTTATGCTAAGAAT+TGG 0.331666 tig0021897:+24438 Msa1394820:five_prime_UTR
ACTAAGTACCTACTCCGTTT+TGG 0.335374 tig0021897:+28123 Msa1394820:five_prime_UTR
GAAATCAGTTACATGATAAA+AGG 0.335928 tig0021897:-23722 None:intergenic
ATCCCATGAGCAGCAGTCTA+TGG 0.340503 tig0021897:+24962 Msa1394820:five_prime_UTR
TGATCCAATCCAAATTTATT+CGG 0.340666 tig0021897:+24057 Msa1394820:five_prime_UTR
TGACATGATATATGAAGTTT+AGG 0.345029 tig0021897:+26612 Msa1394820:five_prime_UTR
TATATTGCTGAAGGTTGAAT+AGG 0.348191 tig0021897:-25590 None:intergenic
TGAATAGACATTGAGTGATA+TGG 0.353375 tig0021897:+28649 Msa1394820:intron
GGCAATATTCCAGATACATT+AGG 0.356342 tig0021897:+22714 Msa1394820:five_prime_UTR
GCGAACCATCGTCTCCAATC+TGG 0.357900 tig0021897:-26906 None:intergenic
TGGAATTATGCTTCTGAGAC+TGG 0.361170 tig0021897:+24603 Msa1394820:five_prime_UTR
GAGTCAAAACCCCAATTTGC+AGG 0.361609 tig0021897:-27295 None:intergenic
TTCACAGGAAGCTTTGCTTT+TGG 0.362772 tig0021897:-28711 None:intergenic
CGATGAAACCTTCATCGGTT+TGG 0.366778 tig0021897:-28021 None:intergenic
TGGAATTTCTCCGAAAAGTT+TGG 0.367995 tig0021897:+24733 Msa1394820:five_prime_UTR
AGTCCAATCCAATGCACTTT+CGG 0.371308 tig0021897:-25465 None:intergenic
AAAGGAGGGTTCAAGGGTAG+AGG 0.371346 tig0021897:-23704 None:intergenic
TGGCCGTTGCAATTTGAGTC+AGG 0.371578 tig0021897:+26741 Msa1394820:five_prime_UTR
ATCGTCTAAAAGTGTACTTC+AGG 0.373518 tig0021897:-25433 None:intergenic
GTGTCTTTGGTTAGTTGGTT+TGG 0.374539 tig0021897:+23862 Msa1394820:five_prime_UTR
GGGGTTGTGGAGGTTGAGAC+TGG 0.375313 tig0021897:-23462 None:intergenic
CGGTTTGGTTCGGTTTGGAT+TGG 0.376882 tig0021897:-27948 None:intergenic
AAGGTTGAATAGGGATATTT+AGG 0.377694 tig0021897:-25580 None:intergenic
GGGTTCTATCTCTCCACAAT+TGG 0.381879 tig0021897:+22547 Msa1394820:five_prime_UTR
AGGAGGGTTCAAGGGTAGAG+GGG 0.392304 tig0021897:-23702 None:intergenic
GCATTCCAAGATGAAATTCT+AGG 0.392793 tig0021897:+24987 Msa1394820:five_prime_UTR
AGGGGTGTAACGGTTCGGTT+TGG 0.396013 tig0021897:-28074 None:intergenic
TTCACTTGAAAAGAGCTTAT+GGG 0.397757 tig0021897:+25732 Msa1394820:five_prime_UTR
GTTGCTTGTGATCCTTTAGA+AGG 0.397805 tig0021897:-26280 None:intergenic
CAAGTCCAACCAATAAAGTT+TGG 0.398001 tig0021897:-23412 None:intergenic
AGAAACCGAACCAAACTTAT+CGG 0.398755 tig0021897:-27968 None:intergenic
TGGTGGTTGGATCGATCATT+TGG 0.399953 tig0021897:-26930 None:intergenic
CTTATCGGTTTGGTTCGGTT+TGG 0.402641 tig0021897:-27953 None:intergenic
ATTACTCTCAAATTCCATCT+AGG 0.402833 tig0021897:-24798 None:intergenic
TTAAATTCAAACAACTTCAC+TGG 0.402854 tig0021897:+23360 Msa1394820:five_prime_UTR
GTTCTAGTAGTTGGAGGAAC+AGG 0.402907 tig0021897:+25841 Msa1394820:five_prime_UTR
ATAAATATTTCAGTTGGGAT+TGG 0.403753 tig0021897:+24416 Msa1394820:five_prime_UTR
CTTAGTAGCAGCCAGCTCTA+TGG 0.405459 tig0021897:-24894 None:intergenic
AAACCTTCATCGGTTTGGTT+TGG 0.406917 tig0021897:-28016 None:intergenic
CCGAACCAAACCGATAAGTT+TGG 0.406995 tig0021897:+27958 Msa1394820:five_prime_UTR
CTAAGGTTGCTGAGATTTGA+AGG 0.408251 tig0021897:-29435 None:intergenic
CATTGGATGAGGAATCTTCC+AGG 0.408974 tig0021897:-26811 None:intergenic
TGCTACAATTCGTTGTTGCC+TGG 0.410074 tig0021897:+26793 Msa1394820:five_prime_UTR
CCGAACCAAACTTATCGGTT+TGG 0.410697 tig0021897:-27963 None:intergenic
AATGTCAATGCCGTGTGATT+TGG 0.411124 tig0021897:-25286 None:intergenic
CTGTTGCTTAATTCAGTATG+AGG 0.411892 tig0021897:-25557 None:intergenic
ATGTATATAACTGTTGGTAT+AGG 0.413413 tig0021897:-26356 None:intergenic
AAGAGCAAGGTTCTAGTAGT+TGG 0.416579 tig0021897:+25832 Msa1394820:five_prime_UTR
ACTTACACTTGCTGTATTTG+AGG 0.416814 tig0021897:-30356 None:intergenic
CTATATAGATAGATAGATAT+AGG 0.417635 tig0021897:-25986 None:intergenic
TCGACAAAGATCCCGATAAT+CGG 0.419327 tig0021897:-27114 None:intergenic
GACACTTTGACTGAGTTAAA+GGG 0.421335 tig0021897:+25093 Msa1394820:five_prime_UTR
AACATCACCTCACACTTTCA+AGG 0.421673 tig0021897:-23789 None:intergenic
GATAGATATAGGAATCTTCA+TGG 0.422261 tig0021897:-25975 None:intergenic
TATGCTAAGAATTGGACTTT+CGG 0.423718 tig0021897:+24446 Msa1394820:five_prime_UTR
AAATAATATTTCTTCAAAGA+AGG 0.423735 tig0021897:+24294 Msa1394820:five_prime_UTR
TTCCACATTACATTACAATT+CGG 0.424523 tig0021897:-26575 None:intergenic
CAAACGTGTCTTTGGTTAGT+TGG 0.424702 tig0021897:+23857 Msa1394820:five_prime_UTR
GTTATCCTAGAATTTCATCT+TGG 0.426723 tig0021897:-24992 None:intergenic
TTCATCGGTTTGGTTTGGTT+CGG 0.430736 tig0021897:-28011 None:intergenic
CTTTAGAAGGAGGAGTGAAT+TGG 0.430885 tig0021897:-26267 None:intergenic
CAAACCGAATAAATTTGGAT+TGG 0.432110 tig0021897:-24061 None:intergenic
CGAAGGTTACTGATGAAATC+TGG 0.433096 tig0021897:-30545 None:intergenic
GTTGATAAATGATGCATGTA+TGG 0.433923 tig0021897:+27688 Msa1394820:five_prime_UTR
AATAACAAAACCGAAGAGAT+TGG 0.434271 tig0021897:-23989 None:intergenic
TTAGCACACAACAGTTTGTC+AGG 0.435453 tig0021897:+29563 Msa1394820:CDS
TCAAGTATAAATATTTCAGT+TGG 0.435662 tig0021897:+24410 Msa1394820:five_prime_UTR
TGGTCTTTCGTTAGTCAGTT+CGG 0.436018 tig0021897:+23882 Msa1394820:five_prime_UTR
TCCGGCATAGGCGTAGGTTC+TGG 0.441152 tig0021897:+28737 Msa1394820:CDS
AAAACGGAGTAGGTACTTAG+TGG 0.443346 tig0021897:-28121 None:intergenic
GATAATCGGCGTATCAAAGA+TGG 0.443540 tig0021897:-27100 None:intergenic
TCTTTGATACGCCGATTATC+GGG 0.444431 tig0021897:+27103 Msa1394820:five_prime_UTR
TTTGGATTGGTTCGGCTGAT+CGG 0.444836 tig0021897:-27935 None:intergenic
ATGGAGTTTGGAGCACTTGA+AGG 0.445231 tig0021897:+30305 Msa1394820:CDS
TGTAACGGTTCGGTTTGGAT+TGG 0.445265 tig0021897:-28069 None:intergenic
AATGATGGATGAATGAATCT+TGG 0.446412 tig0021897:+27758 Msa1394820:five_prime_UTR
TCCAACTGTTGTTACTTCAA+TGG 0.448105 tig0021897:-27236 None:intergenic
CATGATAAAAGGAGGGTTCA+AGG 0.448202 tig0021897:-23711 None:intergenic
TTGTCCTCAGTTGAAGCTTG+TGG 0.449291 tig0021897:+30509 Msa1394820:CDS
TTTGCCAGACTTAACATCAA+TGG 0.449960 tig0021897:+29589 Msa1394820:CDS
CCGAAAAGTTTGGTACAAGA+AGG 0.450979 tig0021897:+24743 Msa1394820:five_prime_UTR
TTATTCGGTTTGAATTGGAT+TGG 0.451948 tig0021897:+24072 Msa1394820:five_prime_UTR
TTGTTTCATGTGATTGGCTA+GGG 0.451980 tig0021897:-25495 None:intergenic
CTGCAAGATCAAGAACTTGA+AGG 0.452017 tig0021897:+24833 Msa1394820:five_prime_UTR
TTTCGTCAAGCTGGTGCGTA+GGG 0.452804 tig0021897:-28093 None:intergenic
CTTTCGTCAAGCTGGTGCGT+AGG 0.453875 tig0021897:-28094 None:intergenic
TTATCCATTGATGTTAAGTC+TGG 0.455056 tig0021897:-29593 None:intergenic
AATTACCATATATATAATAT+AGG 0.455459 tig0021897:-27324 None:intergenic
GTGGTTTGCTTTCGTCAAGC+TGG 0.455675 tig0021897:-28102 None:intergenic
CAAACTTTATTGGTTGGACT+TGG 0.457544 tig0021897:+23413 Msa1394820:five_prime_UTR
ACTCTCCAAACTTTATTGGT+TGG 0.457586 tig0021897:+23407 Msa1394820:five_prime_UTR
CAGATTTCATCAGTAACCTT+CGG 0.457646 tig0021897:+30546 Msa1394820:CDS
AAGGAGGGTTCAAGGGTAGA+GGG 0.459844 tig0021897:-23703 None:intergenic
CAATTTCAGGAGGTGAAATC+GGG 0.460181 tig0021897:-24649 None:intergenic
ACCATCCAATCCAATCTCTT+CGG 0.460263 tig0021897:+23979 Msa1394820:five_prime_UTR
GGTTCTATCTCTCCACAATT+GGG 0.460350 tig0021897:+22548 Msa1394820:five_prime_UTR
GTATGTTTCAATGATGAAAC+TGG 0.460739 tig0021897:+26660 Msa1394820:five_prime_UTR
TTATAAGGGTGTTCGCGGAT+TGG 0.460769 tig0021897:+23932 Msa1394820:five_prime_UTR
CTCGACAGAAATTTCTTGAC+AGG 0.462573 tig0021897:+29405 Msa1394820:CDS
TTGGAGAGTTTCCCCAATGA+AGG 0.463150 tig0021897:-23393 None:intergenic
GAGTCAATTCATGTAACTGC+AGG 0.463664 tig0021897:+22498 Msa1394820:five_prime_UTR
CAAGTATAAATATTTCAGTT+GGG 0.464279 tig0021897:+24411 Msa1394820:five_prime_UTR
CGAACCATCGTCTCCAATCT+GGG 0.465629 tig0021897:-26905 None:intergenic
TATGTATGAAATATTGAGTA+AGG 0.465865 tig0021897:+27785 Msa1394820:five_prime_UTR
CCTTAAATTGCAACAAGGCA+TGG 0.466184 tig0021897:+25057 Msa1394820:five_prime_UTR
CTCATCAAGCATCAAAGAAC+AGG 0.467867 tig0021897:+28363 Msa1394820:CDS
GCCTATGCCGGAAGCTTCAC+AGG 0.468361 tig0021897:-28726 None:intergenic
ATATTGCTGAAGGTTGAATA+GGG 0.468369 tig0021897:-25589 None:intergenic
TTAAACTTCACATCTTTGGT+TGG 0.469549 tig0021897:-28782 None:intergenic
TAAAATACTAGACACACATT+AGG 0.470779 tig0021897:+25222 Msa1394820:five_prime_UTR
GTCTCAACCTCCACAACCCC+TGG 0.471124 tig0021897:+23465 Msa1394820:five_prime_UTR
TTGGCCAGGCTCAATGCCTA+TGG 0.471299 tig0021897:-27193 None:intergenic
TCAAGATCATTCTTACAAGA+AGG 0.471977 tig0021897:-22754 None:intergenic
GTGACAAATGTGAGCTTGAA+AGG 0.475200 tig0021897:-28816 None:intergenic
TGGTTCGGTTTGGATTGGTT+CGG 0.476344 tig0021897:-27943 None:intergenic
CATCCATAGACTGCTGCTCA+TGG 0.476711 tig0021897:-24965 None:intergenic
TGCGTAGGGGTGTAACGGTT+CGG 0.476797 tig0021897:-28079 None:intergenic
CCAAACCGATAAGTTTGGTT+CGG 0.477012 tig0021897:+27963 Msa1394820:five_prime_UTR
CCAAATCATTGCAAATCGTC+AGG 0.477905 tig0021897:+28325 Msa1394820:CDS
TCAAGAACTTGAAGGTGTAC+AGG 0.479672 tig0021897:+24841 Msa1394820:five_prime_UTR
TACCGTTTCCCTGGTCAACC+TGG 0.480068 tig0021897:-26695 None:intergenic
AAATTTGGATTGGATCAGAT+AGG 0.482119 tig0021897:-24051 None:intergenic
ACATCTTATTGAATTATTCA+GGG 0.482530 tig0021897:+23335 Msa1394820:five_prime_UTR
TGTCCGAAAGTGCATTGGAT+TGG 0.483889 tig0021897:+25462 Msa1394820:five_prime_UTR
ACCGAAGAGATTGGATTGGA+TGG 0.485024 tig0021897:-23980 None:intergenic
GGAGGGTTCAAGGGTAGAGG+GGG 0.488257 tig0021897:-23701 None:intergenic
GAAAGGTCGCCTATCCTAGA+TGG 0.489857 tig0021897:+24784 Msa1394820:five_prime_UTR
TGCAATTTGAGTCAGGGCAG+CGG 0.490704 tig0021897:+26748 Msa1394820:five_prime_UTR
CCAAACTTATCGGTTTGGTT+CGG 0.491267 tig0021897:-27958 None:intergenic
CTCTATCGTTCCGTGGTGGT+TGG 0.492399 tig0021897:-26943 None:intergenic
TATATGAAGTTTAGGTAAGT+AGG 0.492430 tig0021897:+26620 Msa1394820:five_prime_UTR
CGATTGAATGAATGAATGAA+TGG 0.492619 tig0021897:-26495 None:intergenic
TAAATTGTCCGAAAGTGCAT+TGG 0.493004 tig0021897:+25457 Msa1394820:five_prime_UTR
CAATTACTTACACATAATTG+AGG 0.496345 tig0021897:-29616 None:intergenic
CAATTCACTCCTCCTTCTAA+AGG 0.498918 tig0021897:+26268 Msa1394820:five_prime_UTR
GTTAGATTTGTGAGTGTGCT+TGG 0.499772 tig0021897:+24523 Msa1394820:five_prime_UTR
ATTGTTTCATGTGATTGGCT+AGG 0.500129 tig0021897:-25496 None:intergenic
AACTGGTGATCGACATATCC+AGG 0.502872 tig0021897:+26677 Msa1394820:five_prime_UTR
TTGGCTGGTTGCAGCTTCAG+TGG 0.503624 tig0021897:+22693 Msa1394820:five_prime_UTR
CAAGATTATAAGGGTGTTCG+CGG 0.503770 tig0021897:+23927 Msa1394820:five_prime_UTR
GTGATGGCTCTGAGCCTTCG+AGG 0.504190 tig0021897:-23636 None:intergenic
CTTTACAATTGTGAATTGTA+CGG 0.504840 tig0021897:-24481 None:intergenic
TCCTGTGAAGCTTCCGGCAT+AGG 0.506829 tig0021897:+28725 Msa1394820:CDS
GCATGGTAAGGATTTAATTG+AGG 0.507031 tig0021897:-27017 None:intergenic
TCGACATATCCAGGTTGACC+AGG 0.507098 tig0021897:+26686 Msa1394820:five_prime_UTR
AAACACACTCAAGATTATAA+GGG 0.509540 tig0021897:+23918 Msa1394820:five_prime_UTR
AGATAAGCGATTCCCCAGAT+TGG 0.509676 tig0021897:+26892 Msa1394820:five_prime_UTR
TGTTCGCAATCAAATTGCAT+TGG 0.510282 tig0021897:-26870 None:intergenic
ACCAAAATGCACAGCAACTC+AGG 0.510637 tig0021897:-25365 None:intergenic
GTAGGTTCTGGCGTAGCATC+CGG 0.513643 tig0021897:+28749 Msa1394820:CDS
GATTCAACATATGCATGGTA+AGG 0.515364 tig0021897:-27029 None:intergenic
GTTCGCGGATTGGATTGGTT+CGG 0.520195 tig0021897:+23942 Msa1394820:five_prime_UTR
GGCAATCACTCAGCCTACCT+TGG 0.522551 tig0021897:-27212 None:intergenic
GAACTGTCACTGCCGTATCA+AGG 0.523972 tig0021897:+28145 Msa1394820:five_prime_UTR
ATCCAGGTTGACCAGGGAAA+CGG 0.524632 tig0021897:+26693 Msa1394820:five_prime_UTR
GTTGGAGGAACAGGATACAT+AGG 0.524983 tig0021897:+25850 Msa1394820:five_prime_UTR
TGCTCAGTTTACATTGGATG+AGG 0.529316 tig0021897:-26822 None:intergenic
GCCATTGAAGTAACAACAGT+TGG 0.531805 tig0021897:+27235 Msa1394820:five_prime_UTR
GGCCGTTGCAATTTGAGTCA+GGG 0.534236 tig0021897:+26742 Msa1394820:five_prime_UTR
GTTGAAAATGTGGCGGAGGG+TGG 0.534550 tig0021897:+28671 Msa1394820:CDS
TTTGGTTGGTTTGACATCGC+CGG 0.534553 tig0021897:-28768 None:intergenic
TCCTCGTCTCAAAATCTAGC+AGG 0.535091 tig0021897:+28221 Msa1394820:CDS
GGACGCATGTACCGTTTCCC+TGG 0.535239 tig0021897:-26704 None:intergenic
TATGTTGAATCAAGTTAAAG+AGG 0.535573 tig0021897:+27041 Msa1394820:five_prime_UTR
GAACCAAACCAAACCGATGA+AGG 0.536873 tig0021897:+28013 Msa1394820:five_prime_UTR
GAGGTCTAAACCAGGGGTTG+TGG 0.537480 tig0021897:-23475 None:intergenic
AGGGTGTTCGCGGATTGGAT+TGG 0.538505 tig0021897:+23937 Msa1394820:five_prime_UTR
GAATGTGCCTATCCATATCA+AGG 0.540832 tig0021897:+25652 Msa1394820:five_prime_UTR
AATGATGCATGTATGGATCA+TGG 0.542105 tig0021897:+27695 Msa1394820:five_prime_UTR
TCGTATCTGAAGGGTGCCGA+CGG 0.543474 tig0021897:+27166 Msa1394820:five_prime_UTR
TAAAGGGAAACATGTAAATG+TGG 0.545097 tig0021897:+25109 Msa1394820:five_prime_UTR
CGGCAGTGACAGTTCCAAAA+CGG 0.545517 tig0021897:-28137 None:intergenic
GTCTAAACCAGGGGTTGTGG+AGG 0.547176 tig0021897:-23472 None:intergenic
AAAGCTTCCTGTGAAGCTTC+CGG 0.547441 tig0021897:+28719 Msa1394820:CDS
AACTTGATTCAACATATGCA+TGG 0.547871 tig0021897:-27034 None:intergenic
ATCAGTTACATGATAAAAGG+AGG 0.549601 tig0021897:-23719 None:intergenic
TAGGCACATTCACAACTTTG+TGG 0.551164 tig0021897:-25640 None:intergenic
ACTAACCAAAGACACGTTTG+AGG 0.552366 tig0021897:-23854 None:intergenic
ACAATTCGGTGATGTTGCTA+AGG 0.552842 tig0021897:-29452 None:intergenic
CAAGAACTTGAAGGTGTACA+GGG 0.553248 tig0021897:+24842 Msa1394820:five_prime_UTR
AGCAAGGTTCTAGTAGTTGG+AGG 0.553447 tig0021897:+25835 Msa1394820:five_prime_UTR
TACCGAATTGTAATGTAATG+TGG 0.553604 tig0021897:+26573 Msa1394820:five_prime_UTR
CAAAACCGAAGAGATTGGAT+TGG 0.555039 tig0021897:-23984 None:intergenic
ATGATAAAAGGAGGGTTCAA+GGG 0.555049 tig0021897:-23710 None:intergenic
TTCATCATTGAAACATACAT+TGG 0.556573 tig0021897:-26655 None:intergenic
GACTGAAACCCTGCAAATTG+GGG 0.557765 tig0021897:+27286 Msa1394820:five_prime_UTR
TTATGTTGAATACCGATACT+AGG 0.559190 tig0021897:+23603 Msa1394820:five_prime_UTR
TGACAAATGTGAGCTTGAAA+GGG 0.559468 tig0021897:-28815 None:intergenic
TAGATCAAAAGACAACAAGT+TGG 0.560421 tig0021897:+24691 Msa1394820:five_prime_UTR
ATAGACTGCTGCTCATGGGA+TGG 0.560643 tig0021897:-24960 None:intergenic
AACGAGATGTGACCTTGATA+CGG 0.560936 tig0021897:-28157 None:intergenic
TATTCCATAGGCATTGAGCC+TGG 0.563062 tig0021897:+27189 Msa1394820:five_prime_UTR
GAAGCATGCTCAGTTTACAT+TGG 0.564547 tig0021897:-26828 None:intergenic
GCCTTGTTGCAATTTAAGGA+AGG 0.565947 tig0021897:-25053 None:intergenic
CATGAATTGTACCATAGAGC+TGG 0.566604 tig0021897:+24883 Msa1394820:five_prime_UTR
TGGACTTAGTTAATCAGCAA+AGG 0.567374 tig0021897:-26850 None:intergenic
GCTGGTGCGTAGGGGTGTAA+CGG 0.567456 tig0021897:-28084 None:intergenic
TCTCAAATTCCATCTAGGAT+AGG 0.568297 tig0021897:-24793 None:intergenic
CAAACCGATGAAGGTTTCAT+CGG 0.569321 tig0021897:+28022 Msa1394820:five_prime_UTR
GCCAGAACCTACGCCTATGC+CGG 0.572999 tig0021897:-28738 None:intergenic
TATGGTTGAAAATGTGGCGG+AGG 0.574266 tig0021897:+28667 Msa1394820:CDS
GGAGATCTCTCTCCTAGTAT+CGG 0.576903 tig0021897:-23615 None:intergenic
GGGTGCCGACGGTATTCCAT+AGG 0.579023 tig0021897:+27177 Msa1394820:five_prime_UTR
TTGCTTAAGTCACCCAATTG+TGG 0.579166 tig0021897:-22560 None:intergenic
TATTTCAGTTGGGATTGGAT+CGG 0.579871 tig0021897:+24421 Msa1394820:five_prime_UTR
ATCCATAGACTGCTGCTCAT+GGG 0.580000 tig0021897:-24964 None:intergenic
AGTCAAAACCCCAATTTGCA+GGG 0.580253 tig0021897:-27294 None:intergenic
GTGATGTTGCGATAGTCTCT+TGG 0.580555 tig0021897:+23804 Msa1394820:five_prime_UTR
CAACATTCCTTGATATGGAT+AGG 0.585012 tig0021897:-25659 None:intergenic
GGGTTGTGGAGGTTGAGACT+GGG 0.585239 tig0021897:-23461 None:intergenic
AGAGAAGATGGAAAAGAGCA+AGG 0.586777 tig0021897:+25819 Msa1394820:five_prime_UTR
GCTTGTGATCCTTTAGAAGG+AGG 0.587275 tig0021897:-26277 None:intergenic
AACTGTTGTTACTTCAATGG+CGG 0.588090 tig0021897:-27233 None:intergenic
ATAGGCATTGAGCCTGGCCA+AGG 0.589016 tig0021897:+27195 Msa1394820:five_prime_UTR
TTCGTTCTTAGTGTCTGCTG+TGG 0.590478 tig0021897:-26181 None:intergenic
TTGAAGTAACAACAGTTGGA+TGG 0.592185 tig0021897:+27239 Msa1394820:five_prime_UTR
ATGTTTAAATGAAATGCTAG+TGG 0.593891 tig0021897:-26527 None:intergenic
GCATTGAGCCTGGCCAAGGT+AGG 0.597021 tig0021897:+27199 Msa1394820:five_prime_UTR
TGTTGCTTAATTCAGTATGA+GGG 0.597558 tig0021897:-25556 None:intergenic
GAAGCTTCCGGCATAGGCGT+AGG 0.603567 tig0021897:+28731 Msa1394820:CDS
TTTGGAGGAATGGTACCAGA+AGG 0.603898 tig0021897:-25766 None:intergenic
TAAGGTTGCTGAGATTTGAA+GGG 0.604275 tig0021897:-29434 None:intergenic
TGCCCTGACTCAAATTGCAA+CGG 0.604605 tig0021897:-26744 None:intergenic
GTGGAGGTTGAGACTGGGAG+AGG 0.605726 tig0021897:-23456 None:intergenic
CACAAACATACCAAATCACA+CGG 0.606500 tig0021897:+25276 Msa1394820:five_prime_UTR
GTAACAACAGTTGGATGGAG+AGG 0.606584 tig0021897:+27244 Msa1394820:five_prime_UTR
TGAACCGATGAAACCTTCAT+CGG 0.606780 tig0021897:-28026 None:intergenic
GAGAGTTTCCCCAATGAAGG+AGG 0.607171 tig0021897:-23390 None:intergenic
AGTCAATTCATGTAACTGCA+GGG 0.610124 tig0021897:+22499 Msa1394820:five_prime_UTR
CAGAAATTTCTTGACAGGAG+AGG 0.611083 tig0021897:+29410 Msa1394820:CDS
CAATACTTAATGTGAACCGA+AGG 0.612624 tig0021897:-30562 None:intergenic
AATTCGGTATATTACTTGCG+AGG 0.612865 tig0021897:-26559 None:intergenic
ATTGATGTTAAGTCTGGCAA+AGG 0.612909 tig0021897:-29587 None:intergenic
CATAGGAAGAAGAATAGTGA+AGG 0.614022 tig0021897:+25867 Msa1394820:five_prime_UTR
ATAATCGGCGTATCAAAGAT+GGG 0.614224 tig0021897:-27099 None:intergenic
GAATGTATGTATATAACTGT+TGG 0.614237 tig0021897:-26362 None:intergenic
ATGGTTGAAAATGTGGCGGA+GGG 0.614742 tig0021897:+28668 Msa1394820:CDS
TCACAACGATCACAAAGCAA+TGG 0.618580 tig0021897:-27074 None:intergenic
GAGTGATATGGTTGAAAATG+TGG 0.619231 tig0021897:+28661 Msa1394820:CDS
TAACAACAGTTGGATGGAGA+GGG 0.620033 tig0021897:+27245 Msa1394820:five_prime_UTR
AGTGCTTAGCCTTTAAAAGG+AGG 0.620658 tig0021897:-23494 None:intergenic
AATACTAGACACACATTAGG+TGG 0.620662 tig0021897:+25225 Msa1394820:five_prime_UTR
TAATAGTGATTAAATACCGT+AGG 0.622188 tig0021897:-25396 None:intergenic
ATGTATGAAATCACAAAACA+AGG 0.622827 tig0021897:-27468 None:intergenic
TTAAAAGGAGGTCTAAACCA+GGG 0.624551 tig0021897:-23482 None:intergenic
TTAGACAATTCTCTAAACAA+AGG 0.627920 tig0021897:-25694 None:intergenic
GGGACATGATATATTGCTGA+AGG 0.628705 tig0021897:-25599 None:intergenic
AAGGCTCAGAGCCATCACTC+TGG 0.629067 tig0021897:+23641 Msa1394820:five_prime_UTR
TTTAAAAGGAGGTCTAAACC+AGG 0.634030 tig0021897:-23483 None:intergenic
GTTGAATCAAGTTAAAGAGG+TGG 0.634920 tig0021897:+27044 Msa1394820:five_prime_UTR
TTCGTCAAGCTGGTGCGTAG+GGG 0.635563 tig0021897:-28092 None:intergenic
TAAAAGGAGGTCTAAACCAG+GGG 0.636560 tig0021897:-23481 None:intergenic
TGACAGTTCCAAAACGGAGT+AGG 0.640042 tig0021897:-28131 None:intergenic
TACAATTGTGAATTGTACGG+TGG 0.643076 tig0021897:-24478 None:intergenic
GTGAAGGCAAGTTTAGAACA+AGG 0.646091 tig0021897:+25883 Msa1394820:five_prime_UTR
ATTATGCTTCTGAGACTGGA+CGG 0.651733 tig0021897:+24607 Msa1394820:five_prime_UTR
GATTTGAGTGACCAGAGTGA+TGG 0.652789 tig0021897:-23652 None:intergenic
TCAGTTACATGATAAAAGGA+GGG 0.653915 tig0021897:-23718 None:intergenic
TGCAAAGCTCTATCGTTCCG+TGG 0.658175 tig0021897:-26950 None:intergenic
CGACATATCCAGGTTGACCA+GGG 0.659737 tig0021897:+26687 Msa1394820:five_prime_UTR
GCCTTCCTTAAATTGCAACA+AGG 0.660114 tig0021897:+25052 Msa1394820:five_prime_UTR
ATTGCTGAACCAATTTCAGG+AGG 0.662787 tig0021897:-24659 None:intergenic
TAGGAGAGAGATCTCCTCGA+AGG 0.664380 tig0021897:+23622 Msa1394820:five_prime_UTR
CAATGCCTATGGAATACCGT+CGG 0.665714 tig0021897:-27182 None:intergenic
ATTCCCCAGATTGGAGACGA+TGG 0.669771 tig0021897:+26901 Msa1394820:five_prime_UTR
TGTTTCATGTGATTGGCTAG+GGG 0.674026 tig0021897:-25494 None:intergenic
GCAACAACGAATTGTAGCAG+AGG 0.675734 tig0021897:-26789 None:intergenic
GAACCATCGTCTCCAATCTG+GGG 0.682279 tig0021897:-26904 None:intergenic
AAATCCACAAGCTTCAACTG+AGG 0.685212 tig0021897:-30513 None:intergenic
ACGGCCAGAAACAACATGCG+AGG 0.695230 tig0021897:-26725 None:intergenic
TGTGTATGAGTACCATGTGA+GGG 0.699775 tig0021897:-28859 None:intergenic
AAAGCTCTATCGTTCCGTGG+TGG 0.701677 tig0021897:-26947 None:intergenic
ATAACTGAGAGGATTATCAG+AGG 0.705317 tig0021897:+25010 Msa1394820:five_prime_UTR
CAATATTCCAGATACATTAG+GGG 0.710334 tig0021897:+22716 Msa1394820:five_prime_UTR
TGATATGGTTGAAAATGTGG+CGG 0.720955 tig0021897:+28664 Msa1394820:CDS
GAAATTCTAGGATAACTGAG+AGG 0.726491 tig0021897:+24999 Msa1394820:five_prime_UTR
AATGATCGATCCAACCACCA+CGG 0.729748 tig0021897:+26933 Msa1394820:five_prime_UTR
ATGTGTATGAGTACCATGTG+AGG 0.736294 tig0021897:-28860 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GATTTTAAAACTAAATTAAT+TGG - tig0021897:24022-24041 None:intergenic 10.0%
!!! TTTTATGACATTTTATAAAA+AGG + tig0021897:24149-24168 Msa1394820:five_prime_UTR 10.0%
!! AATTACCATATATATAATAT+AGG - tig0021897:27327-27346 None:intergenic 10.0%
!! AATAGCATTAAAAAATAATT+GGG - tig0021897:28184-28203 None:intergenic 10.0%
!! AAATAGCATTAAAAAATAAT+TGG - tig0021897:28185-28204 None:intergenic 10.0%
!!! AAAGAAAATTTGAAATATTA+AGG - tig0021897:29289-29308 None:intergenic 10.0%
!! TTCAGTATAATAAAAATAAA+TGG - tig0021897:29333-29352 None:intergenic 10.0%
!! AATTTAAAAGATGAAAATTA+TGG - tig0021897:30435-30454 None:intergenic 10.0%
!!! AAGTTTTAGTAATTTTCATA+AGG + tig0021897:22645-22664 Msa1394820:intron 15.0%
!! AAATAATATTTCTTCAAAGA+AGG + tig0021897:24294-24313 Msa1394820:five_prime_UTR 15.0%
!!! TTTATTTTAAATGTGGTTTT+TGG - tig0021897:27360-27379 None:intergenic 15.0%
!! AATTCTAAATCTATAGTTTA+TGG + tig0021897:27493-27512 Msa1394820:five_prime_UTR 15.0%
!!! ATGGAATGTTTTTATTTAAT+TGG + tig0021897:27512-27531 Msa1394820:five_prime_UTR 15.0%
!!! TGGAATGTTTTTATTTAATT+GGG + tig0021897:27513-27532 Msa1394820:five_prime_UTR 15.0%
!!! GATGTTTTTATTTAATTTCA+TGG + tig0021897:27550-27569 Msa1394820:five_prime_UTR 15.0%
!!! TTTAAAACATCATGAAATTA+TGG - tig0021897:27579-27598 None:intergenic 15.0%
!!! TTTTGACTATGTTTTAATTT+TGG + tig0021897:27638-27657 Msa1394820:five_prime_UTR 15.0%
!!! TTTGACTATGTTTTAATTTT+GGG + tig0021897:27639-27658 Msa1394820:five_prime_UTR 15.0%
!!! TATTTTTTAATGCTATTTAG+AGG + tig0021897:28187-28206 Msa1394820:exon 15.0%
!! TAATAAAAATAAATGGAAGA+AGG - tig0021897:29326-29345 None:intergenic 15.0%
!!! ATTTGAAACAATTAACAAAA+AGG - tig0021897:29372-29391 None:intergenic 15.0%
!! ATCATATCATATCATATTAA+AGG - tig0021897:30059-30078 None:intergenic 15.0%
!!! AATTTTCATCTTTTAAATTC+AGG + tig0021897:30436-30455 Msa1394820:intron 15.0%
!! TCCTTTAATAAAGGTTTAAT+GGG + tig0021897:22527-22546 Msa1394820:five_prime_UTR 20.0%
!!! TTGACTGATGTTTTAAAAAT+TGG + tig0021897:23105-23124 Msa1394820:intron 20.0%
!!! TGATGTTTTAAAAATTGGAA+CGG + tig0021897:23110-23129 Msa1394820:intron 20.0%
!! ACATCTTATTGAATTATTCA+GGG + tig0021897:23335-23354 Msa1394820:five_prime_UTR 20.0%
!!! TTTTTTTAGTGTTAATAACG+TGG + tig0021897:23531-23550 Msa1394820:five_prime_UTR 20.0%
!!! TGACATTTTATAAAAAGGTA+AGG + tig0021897:24154-24173 Msa1394820:five_prime_UTR 20.0%
!! TCAAGTATAAATATTTCAGT+TGG + tig0021897:24410-24429 Msa1394820:five_prime_UTR 20.0%
!! CAAGTATAAATATTTCAGTT+GGG + tig0021897:24411-24430 Msa1394820:five_prime_UTR 20.0%
!!! TTAAATATTTTATCTGCGAA+AGG + tig0021897:24767-24786 Msa1394820:five_prime_UTR 20.0%
!! TATAAATTGTTTCATGTGAT+TGG - tig0021897:25504-25523 None:intergenic 20.0%
!! CTATATAGATAGATAGATAT+AGG - tig0021897:25989-26008 None:intergenic 20.0%
!!! TGAATGAAATTTTGAATGAT+TGG - tig0021897:26442-26461 None:intergenic 20.0%
!!! GGAATGTTTTTATTTAATTG+GGG + tig0021897:27514-27533 Msa1394820:five_prime_UTR 20.0%
!!! TTCATGATGTTTTAAATTTC+AGG + tig0021897:27583-27602 Msa1394820:five_prime_UTR 20.0%
!!! TGTTTTAATTTCAATTTGCA+TGG + tig0021897:27607-27626 Msa1394820:five_prime_UTR 20.0%
!!! TAATTTTGGGAAATTCTTTT+TGG + tig0021897:27652-27671 Msa1394820:five_prime_UTR 20.0%
!!! AAGTTGTTTTTAAAGAATGA+TGG + tig0021897:27743-27762 Msa1394820:five_prime_UTR 20.0%
!! TATGTATGAAATATTGAGTA+AGG + tig0021897:27785-27804 Msa1394820:five_prime_UTR 20.0%
!!! AACTAAATAAATAACTTGTG+CGG - tig0021897:28609-28628 None:intergenic 20.0%
!!! TATCCAAAAAAGATCATTTT+AGG + tig0021897:29108-29127 Msa1394820:intron 20.0%
!!! AAACCTAAAATGATCTTTTT+TGG - tig0021897:29114-29133 None:intergenic 20.0%
!! TTATTTGATGGAAATGATTT+AGG + tig0021897:29201-29220 Msa1394820:intron 20.0%
!!! GGATTTTATAATAACATCAA+TGG + tig0021897:29508-29527 Msa1394820:intron 20.0%
!! ATGAAAATCATTTCTCTTAT+AGG - tig0021897:29669-29688 None:intergenic 20.0%
!!! GTTAATTAAGTCCATATTTT+TGG + tig0021897:29883-29902 Msa1394820:intron 20.0%
!! AACTTCATTAACCAAAAATA+TGG - tig0021897:29897-29916 None:intergenic 20.0%
!! ATCAATAGATAATGTTATGT+AGG + tig0021897:30110-30129 Msa1394820:intron 20.0%
!! TCAATAGATAATGTTATGTA+GGG + tig0021897:30111-30130 Msa1394820:intron 20.0%
!! TAAGTATAAACTACAAACAT+TGG + tig0021897:30400-30419 Msa1394820:intron 20.0%
! GTCCTTTAATAAAGGTTTAA+TGG + tig0021897:22526-22545 Msa1394820:five_prime_UTR 25.0%
! ACCCATTAAACCTTTATTAA+AGG - tig0021897:22531-22550 None:intergenic 25.0%
! AAAATCGACAACAATTTGAA+TGG + tig0021897:22843-22862 Msa1394820:intron 25.0%
! ACAACAATTTGAATGGTTAA+AGG + tig0021897:22850-22869 Msa1394820:intron 25.0%
! GAATGTAATTAACCACATAT+TGG - tig0021897:22881-22900 None:intergenic 25.0%
! TACATTCATAAGACGATTAA+TGG + tig0021897:22894-22913 Msa1394820:intron 25.0%
! GTTTGAACAACTGAAAATAA+TGG - tig0021897:22990-23009 None:intergenic 25.0%
! TTTGATCCTGTTATAATGTA+GGG + tig0021897:23174-23193 Msa1394820:intron 25.0%
! CACATCTTATTGAATTATTC+AGG + tig0021897:23334-23353 Msa1394820:five_prime_UTR 25.0%
! TTAAATTCAAACAACTTCAC+TGG + tig0021897:23360-23379 Msa1394820:five_prime_UTR 25.0%
! ATAACGTGGAAAAATTGAAA+AGG + tig0021897:23545-23564 Msa1394820:five_prime_UTR 25.0%
! GAAATCAGTTACATGATAAA+AGG - tig0021897:23725-23744 None:intergenic 25.0%
! AAAACACACTCAAGATTATA+AGG + tig0021897:23917-23936 Msa1394820:five_prime_UTR 25.0%
! AAACACACTCAAGATTATAA+GGG + tig0021897:23918-23937 Msa1394820:five_prime_UTR 25.0%
! TGATCCAATCCAAATTTATT+CGG + tig0021897:24057-24076 Msa1394820:five_prime_UTR 25.0%
! CAATTCAAACCGAATAAATT+TGG - tig0021897:24069-24088 None:intergenic 25.0%
!! CAAATTTATTCGGTTTGAAT+TGG + tig0021897:24067-24086 Msa1394820:five_prime_UTR 25.0%
! ATAAATATTTCAGTTGGGAT+TGG + tig0021897:24416-24435 Msa1394820:five_prime_UTR 25.0%
! CTTTACAATTGTGAATTGTA+CGG - tig0021897:24484-24503 None:intergenic 25.0%
! TGGAAGAGAACAAAAAATAA+AGG + tig0021897:25129-25148 Msa1394820:five_prime_UTR 25.0%
!! ATTTTATCTGTGAATGTTTC+AGG - tig0021897:25208-25227 None:intergenic 25.0%
! TAAAATACTAGACACACATT+AGG + tig0021897:25222-25241 Msa1394820:five_prime_UTR 25.0%
!!! ATTTTGGTATACAAATCCTA+CGG + tig0021897:25380-25399 Msa1394820:five_prime_UTR 25.0%
! TAATAGTGATTAAATACCGT+AGG - tig0021897:25399-25418 None:intergenic 25.0%
! TTAGACAATTCTCTAAACAA+AGG - tig0021897:25697-25716 None:intergenic 25.0%
! AAAGAAGAAAAAAGAGAAGA+TGG + tig0021897:25807-25826 Msa1394820:five_prime_UTR 25.0%
! ATGTATATAACTGTTGGTAT+AGG - tig0021897:26359-26378 None:intergenic 25.0%
! GAATGTATGTATATAACTGT+TGG - tig0021897:26365-26384 None:intergenic 25.0%
! ATGTTTAAATGAAATGCTAG+TGG - tig0021897:26530-26549 None:intergenic 25.0%
! TTCCACATTACATTACAATT+CGG - tig0021897:26578-26597 None:intergenic 25.0%
! TGACATGATATATGAAGTTT+AGG + tig0021897:26612-26631 Msa1394820:five_prime_UTR 25.0%
! TATATGAAGTTTAGGTAAGT+AGG + tig0021897:26620-26639 Msa1394820:five_prime_UTR 25.0%
! TTCATCATTGAAACATACAT+TGG - tig0021897:26658-26677 None:intergenic 25.0%
! AATTTCACTGAGAACAAAAT+TGG + tig0021897:26979-26998 Msa1394820:five_prime_UTR 25.0%
! TATGTTGAATCAAGTTAAAG+AGG + tig0021897:27041-27060 Msa1394820:five_prime_UTR 25.0%
! CACGACCTATATTATATATA+TGG + tig0021897:27319-27338 Msa1394820:five_prime_UTR 25.0%
!!! AGTTTTTTGAAGTAGATGTT+AGG + tig0021897:28439-28458 Msa1394820:intron 25.0%
!!! GTTTTTTGAAGTAGATGTTA+GGG + tig0021897:28440-28459 Msa1394820:intron 25.0%
! TTTCCATCAAATAATATGTC+AGG - tig0021897:29195-29214 None:intergenic 25.0%
! AATAAATGGAAGAAGGAATT+TGG - tig0021897:29319-29338 None:intergenic 25.0%
! TGTTTCAAATTTATGACAGT+CGG + tig0021897:29382-29401 Msa1394820:intron 25.0%
! AAATCTAAGTTCTCACAATT+CGG - tig0021897:29469-29488 None:intergenic 25.0%
! CAATTACTTACACATAATTG+AGG - tig0021897:29619-29638 None:intergenic 25.0%
! CTCAATTATGTGTAAGTAAT+TGG + tig0021897:29617-29636 Msa1394820:intron 25.0%
! TCGTGAATATTGTTGAAATT+TGG - tig0021897:29696-29715 None:intergenic 25.0%
!! CTTAATTAACCTCAATTTTG+AGG - tig0021897:29873-29892 None:intergenic 25.0%
! GGTTAATGAAGTTATGTAAA+TGG + tig0021897:29904-29923 Msa1394820:intron 25.0%
! AGTTAATTAGGTTCAATGAT+TGG - tig0021897:29956-29975 None:intergenic 25.0%
! GTTATTTGCACAACAAAAAT+TGG - tig0021897:30027-30046 None:intergenic 25.0%
! GATAAAGTTGAAAACCAAAT+TGG - tig0021897:30172-30191 None:intergenic 25.0%
! TTTGTAAATTACTTACAGAG+TGG - tig0021897:30203-30222 None:intergenic 25.0%
!! TAGATTTGATAACTTGACAA+GGG - tig0021897:30244-30263 None:intergenic 25.0%
!! TTAGATTTGATAACTTGACA+AGG - tig0021897:30245-30264 None:intergenic 25.0%
! TCAAGTTATCAAATCTAACA+AGG + tig0021897:30247-30266 Msa1394820:intron 25.0%
! TCCATGATCTATTAGTATTA+TGG + tig0021897:30286-30305 Msa1394820:intron 25.0%
! TCCATAATACTAATAGATCA+TGG - tig0021897:30290-30309 None:intergenic 25.0%
! TCTATTAGTATTATGGAGTT+TGG + tig0021897:30293-30312 Msa1394820:intron 25.0%
AGGGATTTGTCCTTTAATAA+AGG + tig0021897:22518-22537 Msa1394820:five_prime_UTR 30.0%
AATGACATTGGGAAATTAAC+TGG - tig0021897:22617-22636 None:intergenic 30.0%
CTTTCACTTGAAATGACATT+GGG - tig0021897:22628-22647 None:intergenic 30.0%
ACTTTCACTTGAAATGACAT+TGG - tig0021897:22629-22648 None:intergenic 30.0%
GCAATATTCCAGATACATTA+GGG + tig0021897:22715-22734 Msa1394820:five_prime_UTR 30.0%
CAATATTCCAGATACATTAG+GGG + tig0021897:22716-22735 Msa1394820:five_prime_UTR 30.0%
TCAAGATCATTCTTACAAGA+AGG - tig0021897:22757-22776 None:intergenic 30.0%
TTAAAGGTCATTCCAATATG+TGG + tig0021897:22866-22885 Msa1394820:intron 30.0%
! GTTAATGACGTTTAAAATCG+CGG - tig0021897:22968-22987 None:intergenic 30.0%
ATTATACCGACCATATAGAT+TGG + tig0021897:23031-23050 Msa1394820:intron 30.0%
TTATACCGACCATATAGATT+GGG + tig0021897:23032-23051 Msa1394820:intron 30.0%
TATAACAGGATCAAACCAAT+GGG - tig0021897:23169-23188 None:intergenic 30.0%
TTATAACAGGATCAAACCAA+TGG - tig0021897:23170-23189 None:intergenic 30.0%
GTTTGATCCTGTTATAATGT+AGG + tig0021897:23173-23192 Msa1394820:intron 30.0%
!!! AAATGTTTTAGAAACCGAAC+TGG - tig0021897:23268-23287 None:intergenic 30.0%
TTATGTTGAATACCGATACT+AGG + tig0021897:23603-23622 Msa1394820:five_prime_UTR 30.0%
TCAGTTACATGATAAAAGGA+GGG - tig0021897:23721-23740 None:intergenic 30.0%
ATCAGTTACATGATAAAAGG+AGG - tig0021897:23722-23741 None:intergenic 30.0%
AATAACAAAACCGAAGAGAT+TGG - tig0021897:23992-24011 None:intergenic 30.0%
! AAATTTGGATTGGATCAGAT+AGG - tig0021897:24054-24073 None:intergenic 30.0%
CAAACCGAATAAATTTGGAT+TGG - tig0021897:24064-24083 None:intergenic 30.0%
! TTATTCGGTTTGAATTGGAT+TGG + tig0021897:24072-24091 Msa1394820:five_prime_UTR 30.0%
! GTTTGAATTGGATTGGATTT+CGG + tig0021897:24079-24098 Msa1394820:five_prime_UTR 30.0%
TATGCTAAGAATTGGACTTT+CGG + tig0021897:24446-24465 Msa1394820:five_prime_UTR 30.0%
!!! ATCTCAAGTTTTGTTGACTT+TGG + tig0021897:24583-24602 Msa1394820:five_prime_UTR 30.0%
AATATTGCTGAACCAATTTC+AGG - tig0021897:24665-24684 None:intergenic 30.0%
!!! AACTTGTTGTCTTTTGATCT+AGG - tig0021897:24692-24711 None:intergenic 30.0%
TAGATCAAAAGACAACAAGT+TGG + tig0021897:24691-24710 Msa1394820:five_prime_UTR 30.0%
!!! TTGGATAGTTTTGAAACTTG+TGG + tig0021897:24710-24729 Msa1394820:five_prime_UTR 30.0%
ATTACTCTCAAATTCCATCT+AGG - tig0021897:24801-24820 None:intergenic 30.0%
GTTATCCTAGAATTTCATCT+TGG - tig0021897:24995-25014 None:intergenic 30.0%
TAAAGGGAAACATGTAAATG+TGG + tig0021897:25109-25128 Msa1394820:five_prime_UTR 30.0%
! TGTTGCTTAATTCAGTATGA+GGG - tig0021897:25559-25578 None:intergenic 30.0%
AAGGTTGAATAGGGATATTT+AGG - tig0021897:25583-25602 None:intergenic 30.0%
ATATTGCTGAAGGTTGAATA+GGG - tig0021897:25592-25611 None:intergenic 30.0%
TATATTGCTGAAGGTTGAAT+AGG - tig0021897:25593-25612 None:intergenic 30.0%
AAGTACAACATTCCTTGATA+TGG - tig0021897:25667-25686 None:intergenic 30.0%
ATTCACTTGAAAAGAGCTTA+TGG + tig0021897:25731-25750 Msa1394820:five_prime_UTR 30.0%
TTCACTTGAAAAGAGCTTAT+GGG + tig0021897:25732-25751 Msa1394820:five_prime_UTR 30.0%
!!! AATGTTTTGTTTTGGAGGAA+TGG - tig0021897:25779-25798 None:intergenic 30.0%
!!! CTTCAAATGTTTTGTTTTGG+AGG - tig0021897:25784-25803 None:intergenic 30.0%
!!! GTGCTTCAAATGTTTTGTTT+TGG - tig0021897:25787-25806 None:intergenic 30.0%
GATAGATATAGGAATCTTCA+TGG - tig0021897:25978-25997 None:intergenic 30.0%
! CTCTTGAGGTTATATAGTTT+TGG - tig0021897:26227-26246 None:intergenic 30.0%
! TAGGTTATGTGTTTTCTCTT+AGG - tig0021897:26340-26359 None:intergenic 30.0%
CGATTGAATGAATGAATGAA+TGG - tig0021897:26498-26517 None:intergenic 30.0%
TACCGAATTGTAATGTAATG+TGG + tig0021897:26573-26592 Msa1394820:five_prime_UTR 30.0%
GTATGTTTCAATGATGAAAC+TGG + tig0021897:26660-26679 Msa1394820:five_prime_UTR 30.0%
AACTTGATTCAACATATGCA+TGG - tig0021897:27037-27056 None:intergenic 30.0%
! GTTGATAAATGATGCATGTA+TGG + tig0021897:27688-27707 Msa1394820:five_prime_UTR 30.0%
!! AATGATGGATGAATGAATCT+TGG + tig0021897:27758-27777 Msa1394820:five_prime_UTR 30.0%
AAGAAAAAAATGGAGTTGTG+TGG - tig0021897:28250-28269 None:intergenic 30.0%
! AGGAAAATCAGATGAGTTTT+GGG - tig0021897:28398-28417 None:intergenic 30.0%
! AAGGAAAATCAGATGAGTTT+TGG - tig0021897:28399-28418 None:intergenic 30.0%
!!! TCTGATTTTCCTTGTTTTAC+TGG + tig0021897:28406-28425 Msa1394820:intron 30.0%
!!! ATTTTCCTTGTTTTACTGGT+TGG + tig0021897:28410-28429 Msa1394820:intron 30.0%
TGAATAGACATTGAGTGATA+TGG + tig0021897:28649-28668 Msa1394820:intron 30.0%
TTAAACTTCACATCTTTGGT+TGG - tig0021897:28785-28804 None:intergenic 30.0%
CACTTTAAACTTCACATCTT+TGG - tig0021897:28789-28808 None:intergenic 30.0%
! GTCTCAACTCTAAATTTTTG+TGG + tig0021897:29147-29166 Msa1394820:intron 30.0%
CTTCCTGACATATTATTTGA+TGG + tig0021897:29189-29208 Msa1394820:intron 30.0%
TTTGATGGAAATGATTTAGG+TGG + tig0021897:29204-29223 Msa1394820:intron 30.0%
TTGATGGAAATGATTTAGGT+GGG + tig0021897:29205-29224 Msa1394820:intron 30.0%
TTGAGACACGGATATATAAA+AGG + tig0021897:29487-29506 Msa1394820:intron 30.0%
TTATCCATTGATGTTAAGTC+TGG - tig0021897:29596-29615 None:intergenic 30.0%
TGCTTCATTAACCATGAATT+AGG + tig0021897:29814-29833 Msa1394820:intron 30.0%
TCATTAACCATGAATTAGGA+AGG + tig0021897:29818-29837 Msa1394820:intron 30.0%
CATTAACCATGAATTAGGAA+GGG + tig0021897:29819-29838 Msa1394820:intron 30.0%
ATTAACCATGAATTAGGAAG+GGG + tig0021897:29820-29839 Msa1394820:intron 30.0%
GTTCACATAAGCAGTTAATT+AGG - tig0021897:29968-29987 None:intergenic 30.0%
! TTTTGCGACAACAATATAAG+TGG - tig0021897:29999-30018 None:intergenic 30.0%
AGTCAATTCATGTAACTGCA+GGG + tig0021897:22499-22518 Msa1394820:five_prime_UTR 35.0%
! GCTTTAAACTTCACTGTTTC+AGG + tig0021897:22667-22686 Msa1394820:intron 35.0%
! ACTTCACTGTTTCAGGATTT+TGG + tig0021897:22674-22693 Msa1394820:intron 35.0%
GGCAATATTCCAGATACATT+AGG + tig0021897:22714-22733 Msa1394820:five_prime_UTR 35.0%
! GACGATTAATGGATATCACA+AGG + tig0021897:22905-22924 Msa1394820:intron 35.0%
AAATCGCGGCTAATTACATT+CGG - tig0021897:22954-22973 None:intergenic 35.0%
TATACCGACCATATAGATTG+GGG + tig0021897:23033-23052 Msa1394820:intron 35.0%
! ATTGGTTCAATCAGTTGTAC+CGG - tig0021897:23219-23238 None:intergenic 35.0%
CAACTGATTGAACCAATGAT+CGG + tig0021897:23222-23241 Msa1394820:intron 35.0%
TGGAAAAATACCTCCTTCAT+TGG + tig0021897:23380-23399 Msa1394820:five_prime_UTR 35.0%
GGAAAAATACCTCCTTCATT+GGG + tig0021897:23381-23400 Msa1394820:five_prime_UTR 35.0%
GAAAAATACCTCCTTCATTG+GGG + tig0021897:23382-23401 Msa1394820:five_prime_UTR 35.0%
GGAAACTCTCCAAACTTTAT+TGG + tig0021897:23403-23422 Msa1394820:five_prime_UTR 35.0%
ACTCTCCAAACTTTATTGGT+TGG + tig0021897:23407-23426 Msa1394820:five_prime_UTR 35.0%
CAAGTCCAACCAATAAAGTT+TGG - tig0021897:23415-23434 None:intergenic 35.0%
! CAAACTTTATTGGTTGGACT+TGG + tig0021897:23413-23432 Msa1394820:five_prime_UTR 35.0%
TTAAAAGGAGGTCTAAACCA+GGG - tig0021897:23485-23504 None:intergenic 35.0%
TTTAAAAGGAGGTCTAAACC+AGG - tig0021897:23486-23505 None:intergenic 35.0%
! TGGTTTAGACCTCCTTTTAA+AGG + tig0021897:23485-23504 Msa1394820:five_prime_UTR 35.0%
! ACAAGTGCTTAGCCTTTAAA+AGG - tig0021897:23500-23519 None:intergenic 35.0%
! CTAAGCACTTGTGAGTATTT+TGG + tig0021897:23508-23527 Msa1394820:five_prime_UTR 35.0%
CGTGGAAAAATTGAAAAGGA+CGG + tig0021897:23549-23568 Msa1394820:five_prime_UTR 35.0%
ATGATAAAAGGAGGGTTCAA+GGG - tig0021897:23713-23732 None:intergenic 35.0%
!! GAGTAGTTAGCTTGTTAGTT+AGG - tig0021897:23749-23768 None:intergenic 35.0%
CACACTTTCAAGGAACAAAA+TGG - tig0021897:23782-23801 None:intergenic 35.0%
!! TTTTGTTCCTTGAAAGTGTG+AGG + tig0021897:23782-23801 Msa1394820:five_prime_UTR 35.0%
AAAAACCTCAAACGTGTCTT+TGG + tig0021897:23849-23868 Msa1394820:five_prime_UTR 35.0%
TATTTCAGTTGGGATTGGAT+CGG + tig0021897:24421-24440 Msa1394820:five_prime_UTR 35.0%
! GATCGGTTTATGCTAAGAAT+TGG + tig0021897:24438-24457 Msa1394820:five_prime_UTR 35.0%
TACAATTGTGAATTGTACGG+TGG - tig0021897:24481-24500 None:intergenic 35.0%
!!! GATAGTTTTGAAACTTGTGG+TGG + tig0021897:24713-24732 Msa1394820:five_prime_UTR 35.0%
TGGAATTTCTCCGAAAAGTT+TGG + tig0021897:24733-24752 Msa1394820:five_prime_UTR 35.0%
! CCTTCTTGTACCAAACTTTT+CGG - tig0021897:24746-24765 None:intergenic 35.0%
! TCTCAAATTCCATCTAGGAT+AGG - tig0021897:24796-24815 None:intergenic 35.0%
GCATTCCAAGATGAAATTCT+AGG + tig0021897:24987-25006 Msa1394820:five_prime_UTR 35.0%
!! GAAATTCTAGGATAACTGAG+AGG + tig0021897:24999-25018 Msa1394820:five_prime_UTR 35.0%
ATAACTGAGAGGATTATCAG+AGG + tig0021897:25010-25029 Msa1394820:five_prime_UTR 35.0%
TGACACTTTGACTGAGTTAA+AGG + tig0021897:25092-25111 Msa1394820:five_prime_UTR 35.0%
GACACTTTGACTGAGTTAAA+GGG + tig0021897:25093-25112 Msa1394820:five_prime_UTR 35.0%
AATACTAGACACACATTAGG+TGG + tig0021897:25225-25244 Msa1394820:five_prime_UTR 35.0%
CACAAACATACCAAATCACA+CGG + tig0021897:25276-25295 Msa1394820:five_prime_UTR 35.0%
! ATCGTCTAAAAGTGTACTTC+AGG - tig0021897:25436-25455 None:intergenic 35.0%
! TAAATTGTCCGAAAGTGCAT+TGG + tig0021897:25457-25476 Msa1394820:five_prime_UTR 35.0%
! TTGTTTCATGTGATTGGCTA+GGG - tig0021897:25498-25517 None:intergenic 35.0%
! ATTGTTTCATGTGATTGGCT+AGG - tig0021897:25499-25518 None:intergenic 35.0%
! CTGTTGCTTAATTCAGTATG+AGG - tig0021897:25560-25579 None:intergenic 35.0%
CAACATTCCTTGATATGGAT+AGG - tig0021897:25662-25681 None:intergenic 35.0%
CAAGGAATGTTGTACTTTAG+AGG + tig0021897:25670-25689 Msa1394820:five_prime_UTR 35.0%
CATAGGAAGAAGAATAGTGA+AGG + tig0021897:25867-25886 Msa1394820:five_prime_UTR 35.0%
!! TTTTGGTTAGCAGGACATAT+AGG - tig0021897:26153-26172 None:intergenic 35.0%
AATTCGGTATATTACTTGCG+AGG - tig0021897:26562-26581 None:intergenic 35.0%
TGGACTTAGTTAATCAGCAA+AGG - tig0021897:26853-26872 None:intergenic 35.0%
TGTTCGCAATCAAATTGCAT+TGG - tig0021897:26873-26892 None:intergenic 35.0%
GCATGGTAAGGATTTAATTG+AGG - tig0021897:27020-27039 None:intergenic 35.0%
GATTCAACATATGCATGGTA+AGG - tig0021897:27032-27051 None:intergenic 35.0%
GTTGAATCAAGTTAAAGAGG+TGG + tig0021897:27044-27063 Msa1394820:five_prime_UTR 35.0%
ATAATCGGCGTATCAAAGAT+GGG - tig0021897:27102-27121 None:intergenic 35.0%
! ATCTTTGATACGCCGATTAT+CGG + tig0021897:27102-27121 Msa1394820:five_prime_UTR 35.0%
! GCATTTTCTTCGTATCTGAA+GGG + tig0021897:27157-27176 Msa1394820:five_prime_UTR 35.0%
! AACTGTTGTTACTTCAATGG+CGG - tig0021897:27236-27255 None:intergenic 35.0%
! TCCAACTGTTGTTACTTCAA+TGG - tig0021897:27239-27258 None:intergenic 35.0%
TTGAAGTAACAACAGTTGGA+TGG + tig0021897:27239-27258 Msa1394820:five_prime_UTR 35.0%
TAATTGGGGTTCATCTAGTT+TGG + tig0021897:27528-27547 Msa1394820:five_prime_UTR 35.0%
AATGATGCATGTATGGATCA+TGG + tig0021897:27695-27714 Msa1394820:five_prime_UTR 35.0%
AGAAACCGAACCAAACTTAT+CGG - tig0021897:27971-27990 None:intergenic 35.0%
!!! ATTCGCACTTTTTGGGTTTT+TGG - tig0021897:28284-28303 None:intergenic 35.0%
!! ACCCAAAAAGTGCGAATTTT+TGG + tig0021897:28287-28306 Msa1394820:CDS 35.0%
!! CCCAAAAATTCGCACTTTTT+GGG - tig0021897:28291-28310 None:intergenic 35.0%
!! CCCAAAAAGTGCGAATTTTT+GGG + tig0021897:28288-28307 Msa1394820:CDS 35.0%
! ACCCAAAAATTCGCACTTTT+TGG - tig0021897:28292-28311 None:intergenic 35.0%
! GGAAAATCAGATGAGTTTTG+GGG - tig0021897:28397-28416 None:intergenic 35.0%
GGCGCAAAAATTCAAAAACT+AGG - tig0021897:28563-28582 None:intergenic 35.0%
AGCAAAGCAAGGAAAAAAAG+TGG - tig0021897:28584-28603 None:intergenic 35.0%
GAGTGATATGGTTGAAAATG+TGG + tig0021897:28661-28680 Msa1394820:CDS 35.0%
TGATATGGTTGAAAATGTGG+CGG + tig0021897:28664-28683 Msa1394820:CDS 35.0%
TGACAAATGTGAGCTTGAAA+GGG - tig0021897:28818-28837 None:intergenic 35.0%
AAGTTGACATTTGCGATGTT+TGG + tig0021897:28885-28904 Msa1394820:intron 35.0%
GAACTAGTCCTATTGTAGAA+GGG - tig0021897:29236-29255 None:intergenic 35.0%
TGAACTAGTCCTATTGTAGA+AGG - tig0021897:29237-29256 None:intergenic 35.0%
TAAGGTTGCTGAGATTTGAA+GGG - tig0021897:29437-29456 None:intergenic 35.0%
! GAGAACTTAGATTTGAGACA+CGG + tig0021897:29475-29494 Msa1394820:intron 35.0%
ATTGATGTTAAGTCTGGCAA+AGG - tig0021897:29590-29609 None:intergenic 35.0%
TTTGCCAGACTTAACATCAA+TGG + tig0021897:29589-29608 Msa1394820:CDS 35.0%
TGTAAGTAATTGGCATGAGT+TGG + tig0021897:29627-29646 Msa1394820:intron 35.0%
TATTCACGACAACATTTGAG+TGG + tig0021897:29707-29726 Msa1394820:intron 35.0%
AGTGGTTAGCACATTTCAAT+TGG + tig0021897:29725-29744 Msa1394820:intron 35.0%
CATGGTTAATGAAGCAATCA+TGG - tig0021897:29810-29829 None:intergenic 35.0%
GTTCAACTACCTCAAAATTG+AGG + tig0021897:29861-29880 Msa1394820:intron 35.0%
ATCCATCAAAAGCTCCAATT+TGG + tig0021897:30155-30174 Msa1394820:CDS 35.0%
! AACCAAATTGGAGCTTTTGA+TGG - tig0021897:30160-30179 None:intergenic 35.0%
!!! CTGAATAGTTTTGATGGAAG+AGG - tig0021897:30332-30351 None:intergenic 35.0%
!! ACTTACACTTGCTGTATTTG+AGG - tig0021897:30359-30378 None:intergenic 35.0%
CAGATTTCATCAGTAACCTT+CGG + tig0021897:30546-30565 Msa1394820:CDS 35.0%
GAGTCAATTCATGTAACTGC+AGG + tig0021897:22498-22517 Msa1394820:five_prime_UTR 40.0%
GGTTCTATCTCTCCACAATT+GGG + tig0021897:22548-22567 Msa1394820:five_prime_UTR 40.0%
TTGCTTAAGTCACCCAATTG+TGG - tig0021897:22563-22582 None:intergenic 40.0%
GAAAGATCCCCTAATGTATC+TGG - tig0021897:22726-22745 None:intergenic 40.0%
ATACCGACCATATAGATTGG+GGG + tig0021897:23034-23053 Msa1394820:intron 40.0%
GAAAGATCCCCCAATCTATA+TGG - tig0021897:23044-23063 None:intergenic 40.0%
TATAGATTGGGGGATCTTTC+AGG + tig0021897:23044-23063 Msa1394820:intron 40.0%
ATAGATTGGGGGATCTTTCA+GGG + tig0021897:23045-23064 Msa1394820:intron 40.0%
! ACGGTTCAATAAGTTGAACC+AGG + tig0021897:23129-23148 Msa1394820:intron 40.0%
GATCCTGTTATAATGTAGGG+TGG + tig0021897:23177-23196 Msa1394820:intron 40.0%
TGGCTGAATCAAGATTGAAC+CGG + tig0021897:23197-23216 Msa1394820:intron 40.0%
TAAAAGGAGGTCTAAACCAG+GGG - tig0021897:23484-23503 None:intergenic 40.0%
! AGTGCTTAGCCTTTAAAAGG+AGG - tig0021897:23497-23516 None:intergenic 40.0%
CATGATAAAAGGAGGGTTCA+AGG - tig0021897:23714-23733 None:intergenic 40.0%
AACATCACCTCACACTTTCA+AGG - tig0021897:23792-23811 None:intergenic 40.0%
ACTAACCAAAGACACGTTTG+AGG - tig0021897:23857-23876 None:intergenic 40.0%
CAAACGTGTCTTTGGTTAGT+TGG + tig0021897:23857-23876 Msa1394820:five_prime_UTR 40.0%
! GTGTCTTTGGTTAGTTGGTT+TGG + tig0021897:23862-23881 Msa1394820:five_prime_UTR 40.0%
TGGTCTTTCGTTAGTCAGTT+CGG + tig0021897:23882-23901 Msa1394820:five_prime_UTR 40.0%
!! CAAGATTATAAGGGTGTTCG+CGG + tig0021897:23927-23946 Msa1394820:five_prime_UTR 40.0%
!!! GATTGGATTGGTTCGGTTTT+GGG + tig0021897:23949-23968 Msa1394820:five_prime_UTR 40.0%
ACCATCCAATCCAATCTCTT+CGG + tig0021897:23979-23998 Msa1394820:five_prime_UTR 40.0%
CAAAACCGAAGAGATTGGAT+TGG - tig0021897:23987-24006 None:intergenic 40.0%
GTTAGATTTGTGAGTGTGCT+TGG + tig0021897:24523-24542 Msa1394820:five_prime_UTR 40.0%
!! TGGAATTATGCTTCTGAGAC+TGG + tig0021897:24603-24622 Msa1394820:five_prime_UTR 40.0%
!! ATTATGCTTCTGAGACTGGA+CGG + tig0021897:24607-24626 Msa1394820:five_prime_UTR 40.0%
CAATTTCAGGAGGTGAAATC+GGG - tig0021897:24652-24671 None:intergenic 40.0%
CCAATTTCAGGAGGTGAAAT+CGG - tig0021897:24653-24672 None:intergenic 40.0%
ATTGCTGAACCAATTTCAGG+AGG - tig0021897:24662-24681 None:intergenic 40.0%
CCGAAAAGTTTGGTACAAGA+AGG + tig0021897:24743-24762 Msa1394820:five_prime_UTR 40.0%
CTGCAAGATCAAGAACTTGA+AGG + tig0021897:24833-24852 Msa1394820:five_prime_UTR 40.0%
! TCAAGAACTTGAAGGTGTAC+AGG + tig0021897:24841-24860 Msa1394820:five_prime_UTR 40.0%
! CAAGAACTTGAAGGTGTACA+GGG + tig0021897:24842-24861 Msa1394820:five_prime_UTR 40.0%
CATGAATTGTACCATAGAGC+TGG + tig0021897:24883-24902 Msa1394820:five_prime_UTR 40.0%
GCCTTCCTTAAATTGCAACA+AGG + tig0021897:25052-25071 Msa1394820:five_prime_UTR 40.0%
! GCCTTGTTGCAATTTAAGGA+AGG - tig0021897:25056-25075 None:intergenic 40.0%
! CCATGCCTTGTTGCAATTTA+AGG - tig0021897:25060-25079 None:intergenic 40.0%
CCTTAAATTGCAACAAGGCA+TGG + tig0021897:25057-25076 Msa1394820:five_prime_UTR 40.0%
AATGTCAATGCCGTGTGATT+TGG - tig0021897:25289-25308 None:intergenic 40.0%
AGTCCAATCCAATGCACTTT+CGG - tig0021897:25468-25487 None:intergenic 40.0%
! TGTTTCATGTGATTGGCTAG+GGG - tig0021897:25497-25516 None:intergenic 40.0%
GGGACATGATATATTGCTGA+AGG - tig0021897:25602-25621 None:intergenic 40.0%
TGTCCCCCTGATCAAAAAAT+CGG + tig0021897:25616-25635 Msa1394820:five_prime_UTR 40.0%
!!! TGGACCGATTTTTTGATCAG+GGG - tig0021897:25623-25642 None:intergenic 40.0%
!!! GTGGACCGATTTTTTGATCA+GGG - tig0021897:25624-25643 None:intergenic 40.0%
!!! TGTGGACCGATTTTTTGATC+AGG - tig0021897:25625-25644 None:intergenic 40.0%
TAGGCACATTCACAACTTTG+TGG - tig0021897:25643-25662 None:intergenic 40.0%
GAATGTGCCTATCCATATCA+AGG + tig0021897:25652-25671 Msa1394820:five_prime_UTR 40.0%
AGAGAAGATGGAAAAGAGCA+AGG + tig0021897:25819-25838 Msa1394820:five_prime_UTR 40.0%
! AAGAGCAAGGTTCTAGTAGT+TGG + tig0021897:25832-25851 Msa1394820:five_prime_UTR 40.0%
! GTGAAGGCAAGTTTAGAACA+AGG + tig0021897:25883-25902 Msa1394820:five_prime_UTR 40.0%
! CTTTAGAAGGAGGAGTGAAT+TGG - tig0021897:26270-26289 None:intergenic 40.0%
CAATTCACTCCTCCTTCTAA+AGG + tig0021897:26268-26287 Msa1394820:five_prime_UTR 40.0%
GTTGCTTGTGATCCTTTAGA+AGG - tig0021897:26283-26302 None:intergenic 40.0%
TGCTCAGTTTACATTGGATG+AGG - tig0021897:26825-26844 None:intergenic 40.0%
GAAGCATGCTCAGTTTACAT+TGG - tig0021897:26831-26850 None:intergenic 40.0%
TCACAACGATCACAAAGCAA+TGG - tig0021897:27077-27096 None:intergenic 40.0%
GATAATCGGCGTATCAAAGA+TGG - tig0021897:27103-27122 None:intergenic 40.0%
! TCTTTGATACGCCGATTATC+GGG + tig0021897:27103-27122 Msa1394820:five_prime_UTR 40.0%
TCGACAAAGATCCCGATAAT+CGG - tig0021897:27117-27136 None:intergenic 40.0%
! CGCATTTTCTTCGTATCTGA+AGG + tig0021897:27156-27175 Msa1394820:five_prime_UTR 40.0%
GCCATTGAAGTAACAACAGT+TGG + tig0021897:27235-27254 Msa1394820:five_prime_UTR 40.0%
TAACAACAGTTGGATGGAGA+GGG + tig0021897:27245-27264 Msa1394820:five_prime_UTR 40.0%
AGACTGAAACCCTGCAAATT+GGG + tig0021897:27285-27304 Msa1394820:five_prime_UTR 40.0%
AGTCAAAACCCCAATTTGCA+GGG - tig0021897:27297-27316 None:intergenic 40.0%
!! CCAAACTTATCGGTTTGGTT+CGG - tig0021897:27961-27980 None:intergenic 40.0%
CCAAACCGATAAGTTTGGTT+CGG + tig0021897:27963-27982 Msa1394820:five_prime_UTR 40.0%
!! TTCATCGGTTTGGTTTGGTT+CGG - tig0021897:28014-28033 None:intergenic 40.0%
!! AAACCTTCATCGGTTTGGTT+TGG - tig0021897:28019-28038 None:intergenic 40.0%
CAAACCGATGAAGGTTTCAT+CGG + tig0021897:28022-28041 Msa1394820:five_prime_UTR 40.0%
TGAACCGATGAAACCTTCAT+CGG - tig0021897:28029-28048 None:intergenic 40.0%
AAAACGGAGTAGGTACTTAG+TGG - tig0021897:28124-28143 None:intergenic 40.0%
! ACTAAGTACCTACTCCGTTT+TGG + tig0021897:28123-28142 Msa1394820:five_prime_UTR 40.0%
AACGAGATGTGACCTTGATA+CGG - tig0021897:28160-28179 None:intergenic 40.0%
GGTGGAGGGAAAGAAAAAAA+TGG - tig0021897:28260-28279 None:intergenic 40.0%
!!! ACTTTTTGGGTTTTTGGAGG+TGG - tig0021897:28278-28297 None:intergenic 40.0%
CCTGACGATTTGCAATGATT+TGG - tig0021897:28328-28347 None:intergenic 40.0%
CCAAATCATTGCAAATCGTC+AGG + tig0021897:28325-28344 Msa1394820:CDS 40.0%
CTCATCAAGCATCAAAGAAC+AGG + tig0021897:28363-28382 Msa1394820:CDS 40.0%
ACGAACCAACCAGTAAAACA+AGG - tig0021897:28418-28437 None:intergenic 40.0%
ACGCAACACTTACAACTAAC+AGG - tig0021897:28483-28502 None:intergenic 40.0%
! TTCACAGGAAGCTTTGCTTT+TGG - tig0021897:28714-28733 None:intergenic 40.0%
GTGACAAATGTGAGCTTGAA+AGG - tig0021897:28819-28838 None:intergenic 40.0%
! GAGGGCTGAAAAGTTTTACT+TGG - tig0021897:28844-28863 None:intergenic 40.0%
! AAAACTTTTCAGCCCTCACA+TGG + tig0021897:28847-28866 Msa1394820:CDS 40.0%
TGTGTATGAGTACCATGTGA+GGG - tig0021897:28862-28881 None:intergenic 40.0%
ATGTGTATGAGTACCATGTG+AGG - tig0021897:28863-28882 None:intergenic 40.0%
CTCGACAGAAATTTCTTGAC+AGG + tig0021897:29405-29424 Msa1394820:CDS 40.0%
CAGAAATTTCTTGACAGGAG+AGG + tig0021897:29410-29429 Msa1394820:CDS 40.0%
CTAAGGTTGCTGAGATTTGA+AGG - tig0021897:29438-29457 None:intergenic 40.0%
! ACAATTCGGTGATGTTGCTA+AGG - tig0021897:29455-29474 None:intergenic 40.0%
!! ATACAGTGTCACTTCATTCC+AGG + tig0021897:29537-29556 Msa1394820:intron 40.0%
ACTGTTGTGTGCTAAATTCC+TGG - tig0021897:29558-29577 None:intergenic 40.0%
TTAGCACACAACAGTTTGTC+AGG + tig0021897:29563-29582 Msa1394820:CDS 40.0%
GGTTAGCACATTTCAATTGG+TGG + tig0021897:29728-29747 Msa1394820:intron 40.0%
GGTTAATGAAGCAATCATGG+TGG - tig0021897:29807-29826 None:intergenic 40.0%
GTTAACCCCTTCCTAATTCA+TGG - tig0021897:29828-29847 None:intergenic 40.0%
!! TGGAGCTTTTGATGGATCAA+AGG - tig0021897:30152-30171 None:intergenic 40.0%
!!! GGACTGCTGAATAGTTTTGA+TGG - tig0021897:30338-30357 None:intergenic 40.0%
AAATCCACAAGCTTCAACTG+AGG - tig0021897:30516-30535 None:intergenic 40.0%
CGAAGGTTACTGATGAAATC+TGG - tig0021897:30548-30567 None:intergenic 40.0%
GGGTTCTATCTCTCCACAAT+TGG + tig0021897:22547-22566 Msa1394820:five_prime_UTR 45.0%
!! CACTGTTTCAGGATTTTGGC+TGG + tig0021897:22678-22697 Msa1394820:intron 45.0%
GATCCCCCAATCTATATGGT+CGG - tig0021897:23040-23059 None:intergenic 45.0%
GATCAAACCAATGGGCGAAT+TGG - tig0021897:23161-23180 None:intergenic 45.0%
CAGCCACCCTACATTATAAC+AGG - tig0021897:23183-23202 None:intergenic 45.0%
CTGATTGAACCAATGATCGG+AGG + tig0021897:23225-23244 Msa1394820:intron 45.0%
! ACCAATGATCGGAGGTTTTG+CGG + tig0021897:23233-23252 Msa1394820:intron 45.0%
TGCGGATTTGATCTCCAGTT+CGG + tig0021897:23251-23270 Msa1394820:intron 45.0%
TTGGAGAGTTTCCCCAATGA+AGG - tig0021897:23396-23415 None:intergenic 45.0%
GGAGATCTCTCTCCTAGTAT+CGG - tig0021897:23618-23637 None:intergenic 45.0%
GATTTGAGTGACCAGAGTGA+TGG - tig0021897:23655-23674 None:intergenic 45.0%
GTGATGTTGCGATAGTCTCT+TGG + tig0021897:23804-23823 Msa1394820:five_prime_UTR 45.0%
!! TTATAAGGGTGTTCGCGGAT+TGG + tig0021897:23932-23951 Msa1394820:five_prime_UTR 45.0%
!!! GGATTGGATTGGTTCGGTTT+TGG + tig0021897:23948-23967 Msa1394820:five_prime_UTR 45.0%
! ACCGAAGAGATTGGATTGGA+TGG - tig0021897:23983-24002 None:intergenic 45.0%
CCGATTTCACCTCCTGAAAT+TGG + tig0021897:24650-24669 Msa1394820:five_prime_UTR 45.0%
ATCCATAGACTGCTGCTCAT+GGG - tig0021897:24967-24986 None:intergenic 45.0%
! ACCTGAGTTGCTGTGCATTT+TGG + tig0021897:25364-25383 Msa1394820:five_prime_UTR 45.0%
ACCAAAATGCACAGCAACTC+AGG - tig0021897:25368-25387 None:intergenic 45.0%
! TGTCCGAAAGTGCATTGGAT+TGG + tig0021897:25462-25481 Msa1394820:five_prime_UTR 45.0%
!!! GGACCGATTTTTTGATCAGG+GGG - tig0021897:25622-25641 None:intergenic 45.0%
TGGGAGAAAAACAAGCCTTC+TGG + tig0021897:25751-25770 Msa1394820:five_prime_UTR 45.0%
TTTGGAGGAATGGTACCAGA+AGG - tig0021897:25769-25788 None:intergenic 45.0%
! AGCAAGGTTCTAGTAGTTGG+AGG + tig0021897:25835-25854 Msa1394820:five_prime_UTR 45.0%
GTTCTAGTAGTTGGAGGAAC+AGG + tig0021897:25841-25860 Msa1394820:five_prime_UTR 45.0%
GTTGGAGGAACAGGATACAT+AGG + tig0021897:25850-25869 Msa1394820:five_prime_UTR 45.0%
TTCGTTCTTAGTGTCTGCTG+TGG - tig0021897:26184-26203 None:intergenic 45.0%
CCAAAAACTACGTGCTCTTG+AGG - tig0021897:26241-26260 None:intergenic 45.0%
!! CCTCAAGAGCACGTAGTTTT+TGG + tig0021897:26238-26257 Msa1394820:five_prime_UTR 45.0%
! GCTTGTGATCCTTTAGAAGG+AGG - tig0021897:26280-26299 None:intergenic 45.0%
AACTGGTGATCGACATATCC+AGG + tig0021897:26677-26696 Msa1394820:five_prime_UTR 45.0%
TGCCCTGACTCAAATTGCAA+CGG - tig0021897:26747-26766 None:intergenic 45.0%
GCAACAACGAATTGTAGCAG+AGG - tig0021897:26792-26811 None:intergenic 45.0%
TGCTACAATTCGTTGTTGCC+TGG + tig0021897:26793-26812 Msa1394820:five_prime_UTR 45.0%
CATTGGATGAGGAATCTTCC+AGG - tig0021897:26814-26833 None:intergenic 45.0%
AGATAAGCGATTCCCCAGAT+TGG + tig0021897:26892-26911 Msa1394820:five_prime_UTR 45.0%
TGGTGGTTGGATCGATCATT+TGG - tig0021897:26933-26952 None:intergenic 45.0%
AATGATCGATCCAACCACCA+CGG + tig0021897:26933-26952 Msa1394820:five_prime_UTR 45.0%
CAATGCCTATGGAATACCGT+CGG - tig0021897:27185-27204 None:intergenic 45.0%
!! TATTCCATAGGCATTGAGCC+TGG + tig0021897:27189-27208 Msa1394820:five_prime_UTR 45.0%
GTAACAACAGTTGGATGGAG+AGG + tig0021897:27244-27263 Msa1394820:five_prime_UTR 45.0%
CAGACTGAAACCCTGCAAAT+TGG + tig0021897:27284-27303 Msa1394820:five_prime_UTR 45.0%
GACTGAAACCCTGCAAATTG+GGG + tig0021897:27286-27305 Msa1394820:five_prime_UTR 45.0%
GAGTCAAAACCCCAATTTGC+AGG - tig0021897:27298-27317 None:intergenic 45.0%
!! TTTGGATTGGTTCGGCTGAT+CGG - tig0021897:27938-27957 None:intergenic 45.0%
!! TGGTTCGGTTTGGATTGGTT+CGG - tig0021897:27946-27965 None:intergenic 45.0%
!! CTTATCGGTTTGGTTCGGTT+TGG - tig0021897:27956-27975 None:intergenic 45.0%
CCGAACCAAACCGATAAGTT+TGG + tig0021897:27958-27977 Msa1394820:five_prime_UTR 45.0%
! CCGAACCAAACTTATCGGTT+TGG - tig0021897:27966-27985 None:intergenic 45.0%
GAACCAAACCAAACCGATGA+AGG + tig0021897:28013-28032 Msa1394820:five_prime_UTR 45.0%
! CGATGAAACCTTCATCGGTT+TGG - tig0021897:28024-28043 None:intergenic 45.0%
!! TGTAACGGTTCGGTTTGGAT+TGG - tig0021897:28072-28091 None:intergenic 45.0%
TGACAGTTCCAAAACGGAGT+AGG - tig0021897:28134-28153 None:intergenic 45.0%
!!! GCTAGATTTTGAGACGAGGA+GGG - tig0021897:28221-28240 None:intergenic 45.0%
!!! TGCTAGATTTTGAGACGAGG+AGG - tig0021897:28222-28241 None:intergenic 45.0%
TCCTCGTCTCAAAATCTAGC+AGG + tig0021897:28221-28240 Msa1394820:CDS 45.0%
!! TTTGGGTTTTTGGAGGTGGA+GGG - tig0021897:28274-28293 None:intergenic 45.0%
!!! TTTTGGGTTTTTGGAGGTGG+AGG - tig0021897:28275-28294 None:intergenic 45.0%
!!! CGCACTTTTTGGGTTTTTGG+AGG - tig0021897:28281-28300 None:intergenic 45.0%
TATGGTTGAAAATGTGGCGG+AGG + tig0021897:28667-28686 Msa1394820:CDS 45.0%
! ATGGTTGAAAATGTGGCGGA+GGG + tig0021897:28668-28687 Msa1394820:CDS 45.0%
!!! GCTTTGCTTTTGGCTGGTTT+CGG - tig0021897:28704-28723 None:intergenic 45.0%
AAAGCTTCCTGTGAAGCTTC+CGG + tig0021897:28719-28738 Msa1394820:CDS 45.0%
!! TTTGGTTGGTTTGACATCGC+CGG - tig0021897:28771-28790 None:intergenic 45.0%
!! GGGAGTATCCCTTCTACAAT+AGG + tig0021897:29225-29244 Msa1394820:intron 45.0%
!! AGGACTAGTTCAGACAGTTG+AGG + tig0021897:29245-29264 Msa1394820:intron 45.0%
! ATGGAGTTTGGAGCACTTGA+AGG + tig0021897:30305-30324 Msa1394820:CDS 45.0%
TTGTCCTCAGTTGAAGCTTG+TGG + tig0021897:30509-30528 Msa1394820:CDS 45.0%
!!! ATATTTATTTATTTTAAATG+TGG - tig0021897:27367-27386 None:intergenic 5.0%
TCGCGGCTAATTACATTCGG+TGG - tig0021897:22951-22970 None:intergenic 50.0%
GAACTAGCCAATTCGCCCAT+TGG + tig0021897:23151-23170 Msa1394820:intron 50.0%
TCCGCAAAACCTCCGATCAT+TGG - tig0021897:23237-23256 None:intergenic 50.0%
GAGAGTTTCCCCAATGAAGG+AGG - tig0021897:23393-23412 None:intergenic 50.0%
TAGGAGAGAGATCTCCTCGA+AGG + tig0021897:23622-23641 Msa1394820:five_prime_UTR 50.0%
AAGGAGGGTTCAAGGGTAGA+GGG - tig0021897:23706-23725 None:intergenic 50.0%
AAAGGAGGGTTCAAGGGTAG+AGG - tig0021897:23707-23726 None:intergenic 50.0%
!! GTTCGCGGATTGGATTGGTT+CGG + tig0021897:23942-23961 Msa1394820:five_prime_UTR 50.0%
!!! TGGATTGGTTCGGTTTTGGG+AGG + tig0021897:23952-23971 Msa1394820:five_prime_UTR 50.0%
GAAAGGTCGCCTATCCTAGA+TGG + tig0021897:24784-24803 Msa1394820:five_prime_UTR 50.0%
CTTAGTAGCAGCCAGCTCTA+TGG - tig0021897:24897-24916 None:intergenic 50.0%
ATAGACTGCTGCTCATGGGA+TGG - tig0021897:24963-24982 None:intergenic 50.0%
ATCCCATGAGCAGCAGTCTA+TGG + tig0021897:24962-24981 Msa1394820:five_prime_UTR 50.0%
CATCCATAGACTGCTGCTCA+TGG - tig0021897:24968-24987 None:intergenic 50.0%
!!! GCTTGCTGGTTTTGGTTAGC+AGG - tig0021897:26162-26181 None:intergenic 50.0%
! TCGACATATCCAGGTTGACC+AGG + tig0021897:26686-26705 Msa1394820:five_prime_UTR 50.0%
! CGACATATCCAGGTTGACCA+GGG + tig0021897:26687-26706 Msa1394820:five_prime_UTR 50.0%
! ATCCAGGTTGACCAGGGAAA+CGG + tig0021897:26693-26712 Msa1394820:five_prime_UTR 50.0%
TGGCCGTTGCAATTTGAGTC+AGG + tig0021897:26741-26760 Msa1394820:five_prime_UTR 50.0%
GGCCGTTGCAATTTGAGTCA+GGG + tig0021897:26742-26761 Msa1394820:five_prime_UTR 50.0%
TGCAATTTGAGTCAGGGCAG+CGG + tig0021897:26748-26767 Msa1394820:five_prime_UTR 50.0%
ATTCCCCAGATTGGAGACGA+TGG + tig0021897:26901-26920 Msa1394820:five_prime_UTR 50.0%
GAACCATCGTCTCCAATCTG+GGG - tig0021897:26907-26926 None:intergenic 50.0%
CGAACCATCGTCTCCAATCT+GGG - tig0021897:26908-26927 None:intergenic 50.0%
AAAGCTCTATCGTTCCGTGG+TGG - tig0021897:26950-26969 None:intergenic 50.0%
TGCAAAGCTCTATCGTTCCG+TGG - tig0021897:26953-26972 None:intergenic 50.0%
! TTGGATGGAGAGGGCGATTT+TGG + tig0021897:27254-27273 Msa1394820:five_prime_UTR 50.0%
! TGGATGGAGAGGGCGATTTT+GGG + tig0021897:27255-27274 Msa1394820:five_prime_UTR 50.0%
!! CGGTTTGGTTCGGTTTGGAT+TGG - tig0021897:27951-27970 None:intergenic 50.0%
TTTCGTCAAGCTGGTGCGTA+GGG - tig0021897:28096-28115 None:intergenic 50.0%
!! GTGGTTTGCTTTCGTCAAGC+TGG - tig0021897:28105-28124 None:intergenic 50.0%
CGGCAGTGACAGTTCCAAAA+CGG - tig0021897:28140-28159 None:intergenic 50.0%
GAACTGTCACTGCCGTATCA+AGG + tig0021897:28145-28164 Msa1394820:five_prime_UTR 50.0%
!!! GCCTGCTAGATTTTGAGACG+AGG - tig0021897:28225-28244 None:intergenic 50.0%
TTGCGTGAGTTAACTCACGC+AGG + tig0021897:28497-28516 Msa1394820:intron 50.0%
TAGCGTGACTTAAGTCACGC+TGG - tig0021897:28532-28551 None:intergenic 50.0%
!! CAGGAAGCTTTGCTTTTGGC+TGG - tig0021897:28710-28729 None:intergenic 50.0%
! TTGGCTGGTTGCAGCTTCAG+TGG + tig0021897:22693-22712 Msa1394820:five_prime_UTR 55.0%
! TGGGCGAATTGGCTAGTTCC+TGG - tig0021897:23150-23169 None:intergenic 55.0%
GGGTTGTGGAGGTTGAGACT+GGG - tig0021897:23464-23483 None:intergenic 55.0%
GTCTAAACCAGGGGTTGTGG+AGG - tig0021897:23475-23494 None:intergenic 55.0%
GAGGTCTAAACCAGGGGTTG+TGG - tig0021897:23478-23497 None:intergenic 55.0%
AAGGCTCAGAGCCATCACTC+TGG + tig0021897:23641-23660 Msa1394820:five_prime_UTR 55.0%
AGGAGGGTTCAAGGGTAGAG+GGG - tig0021897:23705-23724 None:intergenic 55.0%
!! AGGGTGTTCGCGGATTGGAT+TGG + tig0021897:23937-23956 Msa1394820:five_prime_UTR 55.0%
!!! CTGCTGTGGCTTGCTGGTTT+TGG - tig0021897:26170-26189 None:intergenic 55.0%
! TAGTGTCTGCTGTGGCTTGC+TGG - tig0021897:26176-26195 None:intergenic 55.0%
TACCGTTTCCCTGGTCAACC+TGG - tig0021897:26698-26717 None:intergenic 55.0%
!! GCGTCCTCGCATGTTGTTTC+TGG + tig0021897:26721-26740 Msa1394820:five_prime_UTR 55.0%
ACGGCCAGAAACAACATGCG+AGG - tig0021897:26728-26747 None:intergenic 55.0%
GCGAACCATCGTCTCCAATC+TGG - tig0021897:26909-26928 None:intergenic 55.0%
CTCTATCGTTCCGTGGTGGT+TGG - tig0021897:26946-26965 None:intergenic 55.0%
!! TCGTATCTGAAGGGTGCCGA+CGG + tig0021897:27166-27185 Msa1394820:five_prime_UTR 55.0%
TTGGCCAGGCTCAATGCCTA+TGG - tig0021897:27196-27215 None:intergenic 55.0%
!! ATAGGCATTGAGCCTGGCCA+AGG + tig0021897:27195-27214 Msa1394820:five_prime_UTR 55.0%
GGCAATCACTCAGCCTACCT+TGG - tig0021897:27215-27234 None:intergenic 55.0%
! GGATGGAGAGGGCGATTTTG+GGG + tig0021897:27256-27275 Msa1394820:five_prime_UTR 55.0%
!! AGGGGTGTAACGGTTCGGTT+TGG - tig0021897:28077-28096 None:intergenic 55.0%
! TGCGTAGGGGTGTAACGGTT+CGG - tig0021897:28082-28101 None:intergenic 55.0%
TTCGTCAAGCTGGTGCGTAG+GGG - tig0021897:28095-28114 None:intergenic 55.0%
CTTTCGTCAAGCTGGTGCGT+AGG - tig0021897:28097-28116 None:intergenic 55.0%
CTTGTGCGGCAAGCAAAGCA+AGG - tig0021897:28595-28614 None:intergenic 55.0%
! GTTGAAAATGTGGCGGAGGG+TGG + tig0021897:28671-28690 Msa1394820:CDS 55.0%
TCCTGTGAAGCTTCCGGCAT+AGG + tig0021897:28725-28744 Msa1394820:CDS 55.0%
! GTAGGTTCTGGCGTAGCATC+CGG + tig0021897:28749-28768 Msa1394820:CDS 55.0%
GTGGAGGTTGAGACTGGGAG+AGG - tig0021897:23459-23478 None:intergenic 60.0%
GGGGTTGTGGAGGTTGAGAC+TGG - tig0021897:23465-23484 None:intergenic 60.0%
GTCTCAACCTCCACAACCCC+TGG + tig0021897:23465-23484 Msa1394820:five_prime_UTR 60.0%
!! GTGATGGCTCTGAGCCTTCG+AGG - tig0021897:23639-23658 None:intergenic 60.0%
GGAGGGTTCAAGGGTAGAGG+GGG - tig0021897:23704-23723 None:intergenic 60.0%
GGACGCATGTACCGTTTCCC+TGG - tig0021897:26707-26726 None:intergenic 60.0%
!! GGGTGCCGACGGTATTCCAT+AGG + tig0021897:27177-27196 Msa1394820:five_prime_UTR 60.0%
GCATTGAGCCTGGCCAAGGT+AGG + tig0021897:27199-27218 Msa1394820:five_prime_UTR 60.0%
TCACTCAGCCTACCTTGGCC+AGG - tig0021897:27210-27229 None:intergenic 60.0%
! GCTGGTGCGTAGGGGTGTAA+CGG - tig0021897:28087-28106 None:intergenic 60.0%
GCCTATGCCGGAAGCTTCAC+AGG - tig0021897:28729-28748 None:intergenic 60.0%
GAAGCTTCCGGCATAGGCGT+AGG + tig0021897:28731-28750 Msa1394820:CDS 60.0%
TCCGGCATAGGCGTAGGTTC+TGG + tig0021897:28737-28756 Msa1394820:CDS 60.0%
GCCAGAACCTACGCCTATGC+CGG - tig0021897:28741-28760 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
tig0021897 gene 22476 30578 22476 ID=Msa1394820;Name=Msa1394820
tig0021897 mRNA 22476 30578 22476 ID=Msa1394820-mRNA-1;Parent=Msa1394820;Name=Msa1394820-mRNA-1;_AED=0.24;_eAED=0.24;_QI=5147|0.87|0.88|1|0.75|0.66|9|0|274
tig0021897 exon 22476 22594 22476 ID=Msa1394820-mRNA-1:exon:14546;Parent=Msa1394820-mRNA-1
tig0021897 exon 22689 22824 22689 ID=Msa1394820-mRNA-1:exon:14547;Parent=Msa1394820-mRNA-1
tig0021897 exon 23304 28384 23304 ID=Msa1394820-mRNA-1:exon:14548;Parent=Msa1394820-mRNA-1
tig0021897 exon 28656 28882 28656 ID=Msa1394820-mRNA-1:exon:14549;Parent=Msa1394820-mRNA-1
tig0021897 exon 29401 29472 29401 ID=Msa1394820-mRNA-1:exon:14550;Parent=Msa1394820-mRNA-1
tig0021897 exon 29559 29627 29559 ID=Msa1394820-mRNA-1:exon:14551;Parent=Msa1394820-mRNA-1
tig0021897 exon 30132 30206 30132 ID=Msa1394820-mRNA-1:exon:14552;Parent=Msa1394820-mRNA-1
tig0021897 exon 30301 30372 30301 ID=Msa1394820-mRNA-1:exon:14553;Parent=Msa1394820-mRNA-1
tig0021897 exon 30458 30578 30458 ID=Msa1394820-mRNA-1:exon:14554;Parent=Msa1394820-mRNA-1
tig0021897 five_prime_UTR 22476 22594 22476 ID=Msa1394820-mRNA-1:five_prime_utr;Parent=Msa1394820-mRNA-1
tig0021897 five_prime_UTR 22689 22824 22689 ID=Msa1394820-mRNA-1:five_prime_utr;Parent=Msa1394820-mRNA-1
tig0021897 five_prime_UTR 23304 28195 23304 ID=Msa1394820-mRNA-1:five_prime_utr;Parent=Msa1394820-mRNA-1
tig0021897 CDS 28196 28384 28196 ID=Msa1394820-mRNA-1:cds;Parent=Msa1394820-mRNA-1
tig0021897 CDS 28656 28882 28656 ID=Msa1394820-mRNA-1:cds;Parent=Msa1394820-mRNA-1
tig0021897 CDS 29401 29472 29401 ID=Msa1394820-mRNA-1:cds;Parent=Msa1394820-mRNA-1
tig0021897 CDS 29559 29627 29559 ID=Msa1394820-mRNA-1:cds;Parent=Msa1394820-mRNA-1
tig0021897 CDS 30132 30206 30132 ID=Msa1394820-mRNA-1:cds;Parent=Msa1394820-mRNA-1
tig0021897 CDS 30301 30372 30301 ID=Msa1394820-mRNA-1:cds;Parent=Msa1394820-mRNA-1
tig0021897 CDS 30458 30578 30458 ID=Msa1394820-mRNA-1:cds;Parent=Msa1394820-mRNA-1
Gene Sequence

>Msa1394820

ATGCTATTTAGAGGACTACTCTCCCTCCTCGTCTCAAAATCTAGCAGGCAACCACACAACTCCATTTTTTTCTTTCCCTCCACCTCCAAAAACCCAAAAAGTGCGAATTTTTGGGTCAAAATCTTTGTTCCAAATCATTGCAAATCGTCAGGAAGCAAGTTTCTACGCTCATCAAGCATCAAAGAACAGACATTGAGTGATATGGTTGAAAATGTGGCGGAGGGTGGTGTTGAACCGAAACCAGCCAAAAGCAAAGCTTCCTGTGAAGCTTCCGGCATAGGCGTAGGTTCTGGCGTAGCATCCGGCGATGTCAAACCAACCAAAGATGTGAAGTTTAAAGTGAAAATTCCCTTTCAAGCTCACATTTGTCACGACCAAGTAAAACTTTTCAGCCCTCACATGGTACTCATACACATTCGGCTCGACAGAAATTTCTTGACAGGAGAGGTCCCTTCAAATCTCAGCAACCTTAGCAACATCACCGAATTGAATTTAGCACACAACAGTTTGTCAGGTCCTTTGCCAGACTTAACATCAATGGATAACCTCAATTATGTGGATCTTAGTAACAATTCCTTTGATCCATCAAAAGCTCCAATTTGGTTTTCAACTTTATCATCACTCACCACTCTTATTATGGAGTTTGGAGCACTTGAAGGTCCTCTTCCATCAAAACTATTCAGCAGTCCTCAAATACAGCAAGTGAAACTAAGAAGCAATGCACTGAACAAAACACTAAACATGAATGACAGCATTTGTCCTCAGTTGAAGCTTGTGGATTTACAAGACAACCAGATTTCATCAGTAACCTTCGGTTCACATTAA
Protein sequence

>Msa1394820

MLFRGLLSLLVSKSSRQPHNSIFFFPSTSKNPKSANFWVKIFVPNHCKSSGSKFLRSSSIKEQTLSDMVENVAEGGVEPKPAKSKASCEASGIGVGSGVASGDVKPTKDVKFKVKIPFQAHICHDQVKLFSPHMVLIHIRLDRNFLTGEVPSNLSNLSNITELNLAHNSLSGPLPDLTSMDNLNYVDLSNNSFDPSKAPIWFSTLSSLTTLIMEFGALEGPLPSKLFSSPQIQQVKLRSNALNKTLNMNDSICPQLKLVDLQDNQISSVTFGSH*