Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1203870 | XP_039684649.1 | 98.174 | 438 | 7 | 1 | 1 | 438 | 1 | 437 | 0.0 | 894 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0076040 | Msa1203870 | 0.814837 | 1.256749e-51 | -8.615850e-47 |
| Msa0181610 | Msa1203870 | 0.810561 | 1.084038e-50 | -8.615850e-47 |
| Msa1203870 | Msa1227690 | 0.812370 | 4.386757e-51 | -8.615850e-47 |
| Msa1203870 | Msa1465080 | 0.805362 | 1.384876e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1203870 | MtrunA17_Chr8g0375091 | 98.174 | 438 | 7 | 1 | 1 | 438 | 1 | 437 | 0.0 | 894 |
| Msa1203870 | MtrunA17_Chr5g0402201 | 55.529 | 425 | 148 | 15 | 26 | 438 | 8 | 403 | 5.89e-133 | 389 |
| Msa1203870 | MtrunA17_Chr1g0153281 | 41.274 | 424 | 196 | 15 | 32 | 438 | 232 | 619 | 1.05e-70 | 234 |
| Msa1203870 | MtrunA17_Chr8g0345191 | 35.252 | 139 | 88 | 1 | 276 | 414 | 296 | 432 | 6.65e-12 | 67.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1203870 | AT1G45207.3 | 38.642 | 427 | 199 | 14 | 22 | 437 | 173 | 547 | 8.55e-62 | 209 |
| Msa1203870 | AT1G45207.2 | 38.426 | 432 | 198 | 15 | 22 | 437 | 174 | 553 | 2.74e-59 | 203 |
| Msa1203870 | AT4G36970.1 | 39.905 | 421 | 178 | 17 | 23 | 411 | 5 | 382 | 9.23e-50 | 175 |
| Msa1203870 | AT1G53860.2 | 38.542 | 96 | 58 | 1 | 320 | 414 | 247 | 342 | 1.72e-11 | 65.9 |
| Msa1203870 | AT1G53860.1 | 38.542 | 96 | 58 | 1 | 320 | 414 | 315 | 410 | 2.34e-11 | 65.9 |
Find 107 sgRNAs with CRISPR-Local
Find 284 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACCCACATGGTACGGTTTA+TGG | 0.163138 | 8_1:+59086481 | Msa1203870:CDS |
| TTCAGTTTCCTCTCAGAATA+TGG | 0.168903 | 8_1:+59086000 | Msa1203870:CDS |
| GCTGAAGTGGCAGAAGATTT+TGG | 0.206553 | 8_1:-59086995 | None:intergenic |
| TGAAAATACTTTGCAAATCT+TGG | 0.222959 | 8_1:-59087855 | None:intergenic |
| ATTCTCCCAAGCAATGATTT+TGG | 0.231119 | 8_1:-59087424 | None:intergenic |
| TACAAAGAATGATGTAGTTT+TGG | 0.243494 | 8_1:-59088038 | None:intergenic |
| GAAGAACAATGCCTTCAAAA+TGG | 0.266519 | 8_1:+59086176 | Msa1203870:CDS |
| CTTGTTCTGTCCCTATAATA+TGG | 0.294895 | 8_1:-59086046 | None:intergenic |
| GTCCAGGAGCACCATATTAT+AGG | 0.336169 | 8_1:+59086035 | Msa1203870:CDS |
| TGGTCAAAACTTATGACTTC+AGG | 0.353429 | 8_1:-59087950 | None:intergenic |
| ATGACAATATTCTTGATCTA+TGG | 0.360861 | 8_1:-59087017 | None:intergenic |
| TCAATATCCCAACATGAAAC+TGG | 0.361746 | 8_1:-59087178 | None:intergenic |
| GCTAAAACACCAGTTGAAAA+AGG | 0.365064 | 8_1:-59086418 | None:intergenic |
| ATGTATGACACAGATGAAAT+TGG | 0.369883 | 8_1:+59087721 | Msa1203870:intron |
| TGAGGAAACTGAGATGTCTT+TGG | 0.371629 | 8_1:+59086907 | Msa1203870:CDS |
| AGACCTTATCTGTGGATACT+TGG | 0.374382 | 8_1:-59087882 | None:intergenic |
| TCAGTTTCCTCTCAGAATAT+GGG | 0.377756 | 8_1:+59086001 | Msa1203870:CDS |
| TCAGCATATGATGCTGAAAC+TGG | 0.384604 | 8_1:-59086226 | None:intergenic |
| TAATATGGTGCTCCTGGACT+TGG | 0.390223 | 8_1:-59086031 | None:intergenic |
| ACATCTCTGACTTCTAGTTT+AGG | 0.394351 | 8_1:-59087043 | None:intergenic |
| CCTTGAGAGGTTGGAGATGA+AGG | 0.395796 | 8_1:-59086604 | None:intergenic |
| TCTATGAAGTGAGTGACTTT+TGG | 0.396978 | 8_1:-59087125 | None:intergenic |
| TCCCTATAATATGGTGCTCC+TGG | 0.403704 | 8_1:-59086037 | None:intergenic |
| TCCAGGAGCACCATATTATA+GGG | 0.406831 | 8_1:+59086036 | Msa1203870:CDS |
| GGTCCAATTGTTCCTCCTCC+TGG | 0.407078 | 8_1:+59086313 | Msa1203870:CDS |
| TTATTATTACCTTGAGAGGT+TGG | 0.417684 | 8_1:-59086613 | None:intergenic |
| TGAGTACCTTTATCACATCT+TGG | 0.422194 | 8_1:-59086932 | None:intergenic |
| ACTATGACTTTGTAACCAAA+TGG | 0.424711 | 8_1:+59085916 | Msa1203870:exon |
| GAAGGGTCACATAGCAAATC+AGG | 0.430411 | 8_1:-59086586 | None:intergenic |
| ACTCCAGGAGGAGGAACAAT+TGG | 0.432697 | 8_1:-59086316 | None:intergenic |
| CAATCTGGCTACATGTCTCT+TGG | 0.434423 | 8_1:-59087101 | None:intergenic |
| GCTTGATGTTCTTGTTGTAC+AGG | 0.442105 | 8_1:-59087830 | None:intergenic |
| TATGGTTATGACATTGATCA+TGG | 0.442947 | 8_1:+59086499 | Msa1203870:CDS |
| TACATGTCTCTTGGATCCCC+TGG | 0.459732 | 8_1:-59087092 | None:intergenic |
| GACCTTATCTGTGGATACTT+GGG | 0.460956 | 8_1:-59087881 | None:intergenic |
| AAGAACAATGCCTTCAAAAT+GGG | 0.467650 | 8_1:+59086177 | Msa1203870:CDS |
| CGTAGACCTAAGTCAATTAG+TGG | 0.469461 | 8_1:+59086292 | Msa1203870:CDS |
| TGATGCTCCAGTTTCATGTT+GGG | 0.469609 | 8_1:+59087171 | Msa1203870:CDS |
| AGCAGAAGACACACCATGTC+TGG | 0.470478 | 8_1:+59086133 | Msa1203870:CDS |
| ACAGTCAAGCTACTGTTACC+AGG | 0.482484 | 8_1:+59087074 | Msa1203870:CDS |
| TGATCAACCAGAGTGGTGTA+AGG | 0.482839 | 8_1:+59086542 | Msa1203870:CDS |
| ATTGGACCACTAATTGACTT+AGG | 0.486219 | 8_1:-59086298 | None:intergenic |
| TTCACATACACATCAACAAC+AGG | 0.488313 | 8_1:+59086261 | Msa1203870:CDS |
| ATTGTTCTTCCACCACTGAA+TGG | 0.489924 | 8_1:-59086163 | None:intergenic |
| GGAAGCCAAAATCATTGCTT+GGG | 0.492637 | 8_1:+59087419 | Msa1203870:CDS |
| GGTCAAAACTTATGACTTCA+GGG | 0.492753 | 8_1:-59087949 | None:intergenic |
| AGGAAGCCAAAATCATTGCT+TGG | 0.493234 | 8_1:+59087418 | Msa1203870:CDS |
| GCATCATTCTCTGTTTCTGT+AGG | 0.498019 | 8_1:-59086962 | None:intergenic |
| AGAACAGAAATGAGAGAGAA+TGG | 0.501219 | 8_1:+59087145 | Msa1203870:CDS |
| TTGATGCTCCAGTTTCATGT+TGG | 0.503502 | 8_1:+59087170 | Msa1203870:CDS |
| ATTATTATTATTACCTTGAG+AGG | 0.504404 | 8_1:-59086617 | None:intergenic |
| ATGGGTTCTTTCCCAAGTCC+AGG | 0.504876 | 8_1:+59086019 | Msa1203870:CDS |
| GTGAGTTAGAGAATTCCATT+TGG | 0.505129 | 8_1:-59085931 | None:intergenic |
| AATGGGATGAAGCTGAAAGA+TGG | 0.505743 | 8_1:+59086194 | Msa1203870:CDS |
| TTGGTTCCAAGATGTGATAA+AGG | 0.507960 | 8_1:+59086926 | Msa1203870:CDS |
| AATTGTTCCTCCTCCTGGAG+TGG | 0.513440 | 8_1:+59086318 | Msa1203870:CDS |
| TAGTAATTTCAGTACTAAAG+AGG | 0.516854 | 8_1:-59085897 | None:intergenic |
| CCTTCATCTCCAACCTCTCA+AGG | 0.517527 | 8_1:+59086604 | Msa1203870:CDS |
| ACACATGCCAACTGCATCAA+GGG | 0.519836 | 8_1:-59088007 | None:intergenic |
| AACACATGCCAACTGCATCA+AGG | 0.522367 | 8_1:-59088008 | None:intergenic |
| AACAATCTTATCCATTGTAG+AGG | 0.529582 | 8_1:-59087756 | None:intergenic |
| TGGTGAACAGAAACAGCAAC+AGG | 0.530098 | 8_1:-59086442 | None:intergenic |
| AGAGTATCAAAGCATACAAA+CGG | 0.536185 | 8_1:+59086103 | Msa1203870:CDS |
| TCCCCAAGTATCCACAGATA+AGG | 0.541410 | 8_1:+59087879 | Msa1203870:CDS |
| TTCTTGATCTATGGCTGAAG+TGG | 0.542610 | 8_1:-59087008 | None:intergenic |
| TTTGAGTAGAAAGCCACTCC+AGG | 0.542860 | 8_1:-59086331 | None:intergenic |
| TAGAAAGCCACTCCAGGAGG+AGG | 0.550394 | 8_1:-59086325 | None:intergenic |
| TTAATGCCCCTTGATGCAGT+TGG | 0.551387 | 8_1:+59088000 | Msa1203870:three_prime_UTR |
| TATACATACAACACATAACT+AGG | 0.553336 | 8_1:-59088061 | None:intergenic |
| CAGTCAAGCTACTGTTACCA+GGG | 0.556461 | 8_1:+59087075 | Msa1203870:CDS |
| TGTCTAAGTTGTTGAACAGA+AGG | 0.557030 | 8_1:-59086361 | None:intergenic |
| ATGAATCCCTTACACCACTC+TGG | 0.558082 | 8_1:-59086549 | None:intergenic |
| GACATACTTGGAAGTGTCCA+AGG | 0.558298 | 8_1:-59087209 | None:intergenic |
| TTGTCGCAGGTTACAGAGAG+AGG | 0.560648 | 8_1:+59087398 | Msa1203870:intron |
| TTTGCAGACGAGGAACATGA+TGG | 0.561540 | 8_1:+59086875 | Msa1203870:intron |
| AATATGGTGCTCCTGGACTT+GGG | 0.565019 | 8_1:-59086030 | None:intergenic |
| GGTATGAGAACAACAAAGGA+TGG | 0.570257 | 8_1:+59086071 | Msa1203870:CDS |
| GGATATTGAAGAGTCAACCT+TGG | 0.576650 | 8_1:+59087192 | Msa1203870:CDS |
| CTTGAGAGGTTGGAGATGAA+GGG | 0.579971 | 8_1:-59086603 | None:intergenic |
| CTCACTCAGTGTCATCAAGA+AGG | 0.584404 | 8_1:+59085949 | Msa1203870:CDS |
| ACATGATGGAATGAATAATG+AGG | 0.593049 | 8_1:+59086889 | Msa1203870:CDS |
| AACTGAAGCTGAAACAGAAG+TGG | 0.598348 | 8_1:-59085984 | None:intergenic |
| ACCTTATCTGTGGATACTTG+GGG | 0.606503 | 8_1:-59087880 | None:intergenic |
| ACATAGCAAATCAGGTTCAG+TGG | 0.606788 | 8_1:-59086578 | None:intergenic |
| GATCAACCAGAGTGGTGTAA+GGG | 0.614589 | 8_1:+59086543 | Msa1203870:CDS |
| TGAAGCTGAAACAGAAGTGG+AGG | 0.617288 | 8_1:-59085981 | None:intergenic |
| GAAGAAGAGATCCTCTACAA+TGG | 0.617563 | 8_1:+59087745 | Msa1203870:CDS |
| ATGTACATGATCACTGAGAA+TGG | 0.618757 | 8_1:-59087925 | None:intergenic |
| ACTAGAAGTCAGAGATGTGG+AGG | 0.622819 | 8_1:+59087048 | Msa1203870:CDS |
| TAAACTAGAAGTCAGAGATG+TGG | 0.633543 | 8_1:+59087045 | Msa1203870:CDS |
| CACATGCCAACTGCATCAAG+GGG | 0.633813 | 8_1:-59088006 | None:intergenic |
| CTGCTTAGAGACCTTATCTG+TGG | 0.640253 | 8_1:-59087890 | None:intergenic |
| TGATGATGACCCACATGGTA+CGG | 0.644874 | 8_1:+59086474 | Msa1203870:CDS |
| TCTGTTCAACAACTTAGACA+AGG | 0.648896 | 8_1:+59086364 | Msa1203870:CDS |
| TAACCATAAACCGTACCATG+TGG | 0.649796 | 8_1:-59086484 | None:intergenic |
| GGTTTAACACCATTCAGTGG+TGG | 0.651699 | 8_1:+59086154 | Msa1203870:CDS |
| ATTATAGGGACAGAACAAGA+AGG | 0.657194 | 8_1:+59086050 | Msa1203870:CDS |
| TCTGGTTTAACACCATTCAG+TGG | 0.662392 | 8_1:+59086151 | Msa1203870:CDS |
| AACCATAAACCGTACCATGT+GGG | 0.668678 | 8_1:-59086483 | None:intergenic |
| GAGTAGAAAGCCACTCCAGG+AGG | 0.669430 | 8_1:-59086328 | None:intergenic |
| AGAAGGTATGAGAACAACAA+AGG | 0.671638 | 8_1:+59086067 | Msa1203870:CDS |
| GAAAGAACCCATATTCTGAG+AGG | 0.682358 | 8_1:-59086008 | None:intergenic |
| AGCTGCAGTACGAAAACTTG+AGG | 0.684038 | 8_1:+59087467 | Msa1203870:CDS |
| AGTCAAGCTACTGTTACCAG+GGG | 0.714865 | 8_1:+59087076 | Msa1203870:CDS |
| GAATGGTGTTAAACCAGACA+TGG | 0.718432 | 8_1:-59086146 | None:intergenic |
| GATGATGATGATGACCCACA+TGG | 0.737263 | 8_1:+59086469 | Msa1203870:CDS |
| AATTCTGTGATCAACCAGAG+TGG | 0.739324 | 8_1:+59086535 | Msa1203870:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTATAAAATAGTCAAATAA+TGG | - | chr8_1:59086743-59086762 | None:intergenic | 15.0% |
| !! | ATAAAAAAATCACATTATGT+GGG | - | chr8_1:59087350-59087369 | None:intergenic | 15.0% |
| !! | AATAAAAAAATCACATTATG+TGG | - | chr8_1:59087351-59087370 | None:intergenic | 15.0% |
| !!! | CTTTTTAATACTTTCAAATA+GGG | - | chr8_1:59087624-59087643 | None:intergenic | 15.0% |
| !! | AGTATAAAATAGTCAAATAA+TGG | - | chr8_1:59086743-59086762 | None:intergenic | 15.0% |
| !! | ATAAAAAAATCACATTATGT+GGG | - | chr8_1:59087350-59087369 | None:intergenic | 15.0% |
| !! | AATAAAAAAATCACATTATG+TGG | - | chr8_1:59087351-59087370 | None:intergenic | 15.0% |
| !!! | CTTTTTAATACTTTCAAATA+GGG | - | chr8_1:59087624-59087643 | None:intergenic | 15.0% |
| !! | ATTATTATTATTACCTTGAG+AGG | - | chr8_1:59086620-59086639 | None:intergenic | 20.0% |
| !!! | AAACATATGCAATTTACTTT+TGG | - | chr8_1:59086675-59086694 | None:intergenic | 20.0% |
| !!! | GCTTTTTAATACTTTCAAAT+AGG | - | chr8_1:59087625-59087644 | None:intergenic | 20.0% |
| !!! | TTTGAAAGTATTAAAAAGCT+CGG | + | chr8_1:59087626-59087645 | Msa1203870:intron | 20.0% |
| !! | ATTATTATTATTACCTTGAG+AGG | - | chr8_1:59086620-59086639 | None:intergenic | 20.0% |
| !!! | AAACATATGCAATTTACTTT+TGG | - | chr8_1:59086675-59086694 | None:intergenic | 20.0% |
| !!! | GCTTTTTAATACTTTCAAAT+AGG | - | chr8_1:59087625-59087644 | None:intergenic | 20.0% |
| !!! | TTTGAAAGTATTAAAAAGCT+CGG | + | chr8_1:59087626-59087645 | Msa1203870:intron | 20.0% |
| ! | TAGTAATTTCAGTACTAAAG+AGG | - | chr8_1:59085900-59085919 | None:intergenic | 25.0% |
| !!! | ATATTGTACTTTGATTTTGC+AGG | + | chr8_1:59086643-59086662 | Msa1203870:intron | 25.0% |
| ! | ATGACAATATTCTTGATCTA+TGG | - | chr8_1:59087020-59087039 | None:intergenic | 25.0% |
| ! | AGATTGTTAAAAAACTGAGA+AGG | + | chr8_1:59087771-59087790 | Msa1203870:CDS | 25.0% |
| ! | GATTGTTAAAAAACTGAGAA+GGG | + | chr8_1:59087772-59087791 | Msa1203870:CDS | 25.0% |
| ! | TGAAAATACTTTGCAAATCT+TGG | - | chr8_1:59087858-59087877 | None:intergenic | 25.0% |
| !! | ACAAAGAATGATGTAGTTTT+GGG | - | chr8_1:59088040-59088059 | None:intergenic | 25.0% |
| !! | TACAAAGAATGATGTAGTTT+TGG | - | chr8_1:59088041-59088060 | None:intergenic | 25.0% |
| ! | TATACATACAACACATAACT+AGG | - | chr8_1:59088064-59088083 | None:intergenic | 25.0% |
| ! | TAGTAATTTCAGTACTAAAG+AGG | - | chr8_1:59085900-59085919 | None:intergenic | 25.0% |
| !!! | ATATTGTACTTTGATTTTGC+AGG | + | chr8_1:59086643-59086662 | Msa1203870:intron | 25.0% |
| ! | ATGACAATATTCTTGATCTA+TGG | - | chr8_1:59087020-59087039 | None:intergenic | 25.0% |
| ! | AGATTGTTAAAAAACTGAGA+AGG | + | chr8_1:59087771-59087790 | Msa1203870:CDS | 25.0% |
| ! | GATTGTTAAAAAACTGAGAA+GGG | + | chr8_1:59087772-59087791 | Msa1203870:CDS | 25.0% |
| ! | TGAAAATACTTTGCAAATCT+TGG | - | chr8_1:59087858-59087877 | None:intergenic | 25.0% |
| !! | ACAAAGAATGATGTAGTTTT+GGG | - | chr8_1:59088040-59088059 | None:intergenic | 25.0% |
| !! | TACAAAGAATGATGTAGTTT+TGG | - | chr8_1:59088041-59088060 | None:intergenic | 25.0% |
| ! | TATACATACAACACATAACT+AGG | - | chr8_1:59088064-59088083 | None:intergenic | 25.0% |
| ACTATGACTTTGTAACCAAA+TGG | + | chr8_1:59085916-59085935 | Msa1203870:exon | 30.0% | |
| ! | AGAGTATCAAAGCATACAAA+CGG | + | chr8_1:59086103-59086122 | Msa1203870:CDS | 30.0% |
| AAGAACAATGCCTTCAAAAT+GGG | + | chr8_1:59086177-59086196 | Msa1203870:CDS | 30.0% | |
| !! | TTTTGTTGTGAGGAACTTAA+TGG | + | chr8_1:59086387-59086406 | Msa1203870:CDS | 30.0% |
| TATGGTTATGACATTGATCA+TGG | + | chr8_1:59086499-59086518 | Msa1203870:CDS | 30.0% | |
| TTATTATTACCTTGAGAGGT+TGG | - | chr8_1:59086616-59086635 | None:intergenic | 30.0% | |
| !! | CATATGCAATTTACTTTTGG+TGG | - | chr8_1:59086672-59086691 | None:intergenic | 30.0% |
| TTTGATCTGTTGTCAAATAG+TGG | - | chr8_1:59086820-59086839 | None:intergenic | 30.0% | |
| !!! | GTTATTTTAATTTGCAGACG+AGG | + | chr8_1:59086865-59086884 | Msa1203870:intron | 30.0% |
| ! | ACATGATGGAATGAATAATG+AGG | + | chr8_1:59086889-59086908 | Msa1203870:CDS | 30.0% |
| TAGCATTTACAAGACATACT+TGG | - | chr8_1:59087224-59087243 | None:intergenic | 30.0% | |
| !!! | TCTGAAACTCTTTTGAAGTT+TGG | + | chr8_1:59087256-59087275 | Msa1203870:intron | 30.0% |
| TTCTAGACTCTAGATATACT+TGG | - | chr8_1:59087533-59087552 | None:intergenic | 30.0% | |
| ATCTGTGTCATACATTATCA+TGG | - | chr8_1:59087716-59087735 | None:intergenic | 30.0% | |
| ATGTATGACACAGATGAAAT+TGG | + | chr8_1:59087721-59087740 | Msa1203870:intron | 30.0% | |
| AACAATCTTATCCATTGTAG+AGG | - | chr8_1:59087759-59087778 | None:intergenic | 30.0% | |
| !!! | CAGAATGTTCTTTTTTAACC+TGG | - | chr8_1:59087973-59087992 | None:intergenic | 30.0% |
| ACTATGACTTTGTAACCAAA+TGG | + | chr8_1:59085916-59085935 | Msa1203870:exon | 30.0% | |
| ! | AGAGTATCAAAGCATACAAA+CGG | + | chr8_1:59086103-59086122 | Msa1203870:CDS | 30.0% |
| AAGAACAATGCCTTCAAAAT+GGG | + | chr8_1:59086177-59086196 | Msa1203870:CDS | 30.0% | |
| !! | TTTTGTTGTGAGGAACTTAA+TGG | + | chr8_1:59086387-59086406 | Msa1203870:CDS | 30.0% |
| TATGGTTATGACATTGATCA+TGG | + | chr8_1:59086499-59086518 | Msa1203870:CDS | 30.0% | |
| TTATTATTACCTTGAGAGGT+TGG | - | chr8_1:59086616-59086635 | None:intergenic | 30.0% | |
| !! | CATATGCAATTTACTTTTGG+TGG | - | chr8_1:59086672-59086691 | None:intergenic | 30.0% |
| TTTGATCTGTTGTCAAATAG+TGG | - | chr8_1:59086820-59086839 | None:intergenic | 30.0% | |
| !!! | GTTATTTTAATTTGCAGACG+AGG | + | chr8_1:59086865-59086884 | Msa1203870:intron | 30.0% |
| ! | ACATGATGGAATGAATAATG+AGG | + | chr8_1:59086889-59086908 | Msa1203870:CDS | 30.0% |
| TAGCATTTACAAGACATACT+TGG | - | chr8_1:59087224-59087243 | None:intergenic | 30.0% | |
| !!! | TCTGAAACTCTTTTGAAGTT+TGG | + | chr8_1:59087256-59087275 | Msa1203870:intron | 30.0% |
| TTCTAGACTCTAGATATACT+TGG | - | chr8_1:59087533-59087552 | None:intergenic | 30.0% | |
| ATCTGTGTCATACATTATCA+TGG | - | chr8_1:59087716-59087735 | None:intergenic | 30.0% | |
| ATGTATGACACAGATGAAAT+TGG | + | chr8_1:59087721-59087740 | Msa1203870:intron | 30.0% | |
| AACAATCTTATCCATTGTAG+AGG | - | chr8_1:59087759-59087778 | None:intergenic | 30.0% | |
| !!! | CAGAATGTTCTTTTTTAACC+TGG | - | chr8_1:59087973-59087992 | None:intergenic | 30.0% |
| GTGAGTTAGAGAATTCCATT+TGG | - | chr8_1:59085934-59085953 | None:intergenic | 35.0% | |
| TTCAGTTTCCTCTCAGAATA+TGG | + | chr8_1:59086000-59086019 | Msa1203870:CDS | 35.0% | |
| TCAGTTTCCTCTCAGAATAT+GGG | + | chr8_1:59086001-59086020 | Msa1203870:CDS | 35.0% | |
| CTTGTTCTGTCCCTATAATA+TGG | - | chr8_1:59086049-59086068 | None:intergenic | 35.0% | |
| ATTATAGGGACAGAACAAGA+AGG | + | chr8_1:59086050-59086069 | Msa1203870:CDS | 35.0% | |
| ! | AGAAGGTATGAGAACAACAA+AGG | + | chr8_1:59086067-59086086 | Msa1203870:CDS | 35.0% |
| GAAGAACAATGCCTTCAAAA+TGG | + | chr8_1:59086176-59086195 | Msa1203870:CDS | 35.0% | |
| TTCACATACACATCAACAAC+AGG | + | chr8_1:59086261-59086280 | Msa1203870:CDS | 35.0% | |
| ! | ATTGGACCACTAATTGACTT+AGG | - | chr8_1:59086301-59086320 | None:intergenic | 35.0% |
| TGTCTAAGTTGTTGAACAGA+AGG | - | chr8_1:59086364-59086383 | None:intergenic | 35.0% | |
| TCTGTTCAACAACTTAGACA+AGG | + | chr8_1:59086364-59086383 | Msa1203870:CDS | 35.0% | |
| !!! | TTAGACAAGGTTTTGTTGTG+AGG | + | chr8_1:59086377-59086396 | Msa1203870:CDS | 35.0% |
| GCTAAAACACCAGTTGAAAA+AGG | - | chr8_1:59086421-59086440 | None:intergenic | 35.0% | |
| GGTCATCATCATCATCATAA+TGG | - | chr8_1:59086465-59086484 | None:intergenic | 35.0% | |
| TTGGTTCCAAGATGTGATAA+AGG | + | chr8_1:59086926-59086945 | Msa1203870:CDS | 35.0% | |
| TGAGTACCTTTATCACATCT+TGG | - | chr8_1:59086935-59086954 | None:intergenic | 35.0% | |
| !! | ACATCTCTGACTTCTAGTTT+AGG | - | chr8_1:59087046-59087065 | None:intergenic | 35.0% |
| TAAACTAGAAGTCAGAGATG+TGG | + | chr8_1:59087045-59087064 | Msa1203870:CDS | 35.0% | |
| ! | TCTATGAAGTGAGTGACTTT+TGG | - | chr8_1:59087128-59087147 | None:intergenic | 35.0% |
| AGAACAGAAATGAGAGAGAA+TGG | + | chr8_1:59087145-59087164 | Msa1203870:CDS | 35.0% | |
| TCAATATCCCAACATGAAAC+TGG | - | chr8_1:59087181-59087200 | None:intergenic | 35.0% | |
| GAAAGATGCTTATGGATGAA+TGG | - | chr8_1:59087377-59087396 | None:intergenic | 35.0% | |
| ! | ATTCTCCCAAGCAATGATTT+TGG | - | chr8_1:59087427-59087446 | None:intergenic | 35.0% |
| ATGTACATGATCACTGAGAA+TGG | - | chr8_1:59087928-59087947 | None:intergenic | 35.0% | |
| GGTCAAAACTTATGACTTCA+GGG | - | chr8_1:59087952-59087971 | None:intergenic | 35.0% | |
| TGGTCAAAACTTATGACTTC+AGG | - | chr8_1:59087953-59087972 | None:intergenic | 35.0% | |
| !! | TGAAGTCATAAGTTTTGACC+AGG | + | chr8_1:59087952-59087971 | Msa1203870:three_prime_UTR | 35.0% |
| GTGAGTTAGAGAATTCCATT+TGG | - | chr8_1:59085934-59085953 | None:intergenic | 35.0% | |
| TTCAGTTTCCTCTCAGAATA+TGG | + | chr8_1:59086000-59086019 | Msa1203870:CDS | 35.0% | |
| TCAGTTTCCTCTCAGAATAT+GGG | + | chr8_1:59086001-59086020 | Msa1203870:CDS | 35.0% | |
| CTTGTTCTGTCCCTATAATA+TGG | - | chr8_1:59086049-59086068 | None:intergenic | 35.0% | |
| ATTATAGGGACAGAACAAGA+AGG | + | chr8_1:59086050-59086069 | Msa1203870:CDS | 35.0% | |
| ! | AGAAGGTATGAGAACAACAA+AGG | + | chr8_1:59086067-59086086 | Msa1203870:CDS | 35.0% |
| GAAGAACAATGCCTTCAAAA+TGG | + | chr8_1:59086176-59086195 | Msa1203870:CDS | 35.0% | |
| TTCACATACACATCAACAAC+AGG | + | chr8_1:59086261-59086280 | Msa1203870:CDS | 35.0% | |
| ! | ATTGGACCACTAATTGACTT+AGG | - | chr8_1:59086301-59086320 | None:intergenic | 35.0% |
| TGTCTAAGTTGTTGAACAGA+AGG | - | chr8_1:59086364-59086383 | None:intergenic | 35.0% | |
| TCTGTTCAACAACTTAGACA+AGG | + | chr8_1:59086364-59086383 | Msa1203870:CDS | 35.0% | |
| !!! | TTAGACAAGGTTTTGTTGTG+AGG | + | chr8_1:59086377-59086396 | Msa1203870:CDS | 35.0% |
| GCTAAAACACCAGTTGAAAA+AGG | - | chr8_1:59086421-59086440 | None:intergenic | 35.0% | |
| GGTCATCATCATCATCATAA+TGG | - | chr8_1:59086465-59086484 | None:intergenic | 35.0% | |
| TTGGTTCCAAGATGTGATAA+AGG | + | chr8_1:59086926-59086945 | Msa1203870:CDS | 35.0% | |
| TGAGTACCTTTATCACATCT+TGG | - | chr8_1:59086935-59086954 | None:intergenic | 35.0% | |
| !! | ACATCTCTGACTTCTAGTTT+AGG | - | chr8_1:59087046-59087065 | None:intergenic | 35.0% |
| TAAACTAGAAGTCAGAGATG+TGG | + | chr8_1:59087045-59087064 | Msa1203870:CDS | 35.0% | |
| ! | TCTATGAAGTGAGTGACTTT+TGG | - | chr8_1:59087128-59087147 | None:intergenic | 35.0% |
| AGAACAGAAATGAGAGAGAA+TGG | + | chr8_1:59087145-59087164 | Msa1203870:CDS | 35.0% | |
| TCAATATCCCAACATGAAAC+TGG | - | chr8_1:59087181-59087200 | None:intergenic | 35.0% | |
| GAAAGATGCTTATGGATGAA+TGG | - | chr8_1:59087377-59087396 | None:intergenic | 35.0% | |
| ! | ATTCTCCCAAGCAATGATTT+TGG | - | chr8_1:59087427-59087446 | None:intergenic | 35.0% |
| ATGTACATGATCACTGAGAA+TGG | - | chr8_1:59087928-59087947 | None:intergenic | 35.0% | |
| GGTCAAAACTTATGACTTCA+GGG | - | chr8_1:59087952-59087971 | None:intergenic | 35.0% | |
| TGGTCAAAACTTATGACTTC+AGG | - | chr8_1:59087953-59087972 | None:intergenic | 35.0% | |
| !! | TGAAGTCATAAGTTTTGACC+AGG | + | chr8_1:59087952-59087971 | Msa1203870:three_prime_UTR | 35.0% |
| AACTGAAGCTGAAACAGAAG+TGG | - | chr8_1:59085987-59086006 | None:intergenic | 40.0% | |
| GAAAGAACCCATATTCTGAG+AGG | - | chr8_1:59086011-59086030 | None:intergenic | 40.0% | |
| !! | TCCAGGAGCACCATATTATA+GGG | + | chr8_1:59086036-59086055 | Msa1203870:CDS | 40.0% |
| GGTATGAGAACAACAAAGGA+TGG | + | chr8_1:59086071-59086090 | Msa1203870:CDS | 40.0% | |
| ! | GAATGGTGTTAAACCAGACA+TGG | - | chr8_1:59086149-59086168 | None:intergenic | 40.0% |
| ! | TCTGGTTTAACACCATTCAG+TGG | + | chr8_1:59086151-59086170 | Msa1203870:CDS | 40.0% |
| ATTGTTCTTCCACCACTGAA+TGG | - | chr8_1:59086166-59086185 | None:intergenic | 40.0% | |
| ! | TCAGCTTCATCCCATTTTGA+AGG | - | chr8_1:59086190-59086209 | None:intergenic | 40.0% |
| AATGGGATGAAGCTGAAAGA+TGG | + | chr8_1:59086194-59086213 | Msa1203870:CDS | 40.0% | |
| TCAGCATATGATGCTGAAAC+TGG | - | chr8_1:59086229-59086248 | None:intergenic | 40.0% | |
| CGTAGACCTAAGTCAATTAG+TGG | + | chr8_1:59086292-59086311 | Msa1203870:CDS | 40.0% | |
| !!! | GTGAGTTCACCTTTTTCAAC+TGG | + | chr8_1:59086409-59086428 | Msa1203870:CDS | 40.0% |
| AACCATAAACCGTACCATGT+GGG | - | chr8_1:59086486-59086505 | None:intergenic | 40.0% | |
| TAACCATAAACCGTACCATG+TGG | - | chr8_1:59086487-59086506 | None:intergenic | 40.0% | |
| AATTCTGTGATCAACCAGAG+TGG | + | chr8_1:59086535-59086554 | Msa1203870:CDS | 40.0% | |
| ACATAGCAAATCAGGTTCAG+TGG | - | chr8_1:59086581-59086600 | None:intergenic | 40.0% | |
| TGAGGAAACTGAGATGTCTT+TGG | + | chr8_1:59086907-59086926 | Msa1203870:CDS | 40.0% | |
| !! | GCATCATTCTCTGTTTCTGT+AGG | - | chr8_1:59086965-59086984 | None:intergenic | 40.0% |
| TTCTTGATCTATGGCTGAAG+TGG | - | chr8_1:59087011-59087030 | None:intergenic | 40.0% | |
| ! | TGAGTGACTTTTGGTCAATC+TGG | - | chr8_1:59087119-59087138 | None:intergenic | 40.0% |
| TTGATGCTCCAGTTTCATGT+TGG | + | chr8_1:59087170-59087189 | Msa1203870:CDS | 40.0% | |
| TGATGCTCCAGTTTCATGTT+GGG | + | chr8_1:59087171-59087190 | Msa1203870:CDS | 40.0% | |
| GGATATTGAAGAGTCAACCT+TGG | + | chr8_1:59087192-59087211 | Msa1203870:CDS | 40.0% | |
| GCGACAAAGAAAGATGCTTA+TGG | - | chr8_1:59087385-59087404 | None:intergenic | 40.0% | |
| TAAGCATCTTTCTTTGTCGC+AGG | + | chr8_1:59087385-59087404 | Msa1203870:intron | 40.0% | |
| AGGAAGCCAAAATCATTGCT+TGG | + | chr8_1:59087418-59087437 | Msa1203870:CDS | 40.0% | |
| GGAAGCCAAAATCATTGCTT+GGG | + | chr8_1:59087419-59087438 | Msa1203870:CDS | 40.0% | |
| TAACTGTATAGAACCACAGC+AGG | + | chr8_1:59087662-59087681 | Msa1203870:intron | 40.0% | |
| AACTGTATAGAACCACAGCA+GGG | + | chr8_1:59087663-59087682 | Msa1203870:intron | 40.0% | |
| GAAGAAGAGATCCTCTACAA+TGG | + | chr8_1:59087745-59087764 | Msa1203870:CDS | 40.0% | |
| ! | GCTTGATGTTCTTGTTGTAC+AGG | - | chr8_1:59087833-59087852 | None:intergenic | 40.0% |
| ACCTTATCTGTGGATACTTG+GGG | - | chr8_1:59087883-59087902 | None:intergenic | 40.0% | |
| GACCTTATCTGTGGATACTT+GGG | - | chr8_1:59087884-59087903 | None:intergenic | 40.0% | |
| AGACCTTATCTGTGGATACT+TGG | - | chr8_1:59087885-59087904 | None:intergenic | 40.0% | |
| AACTGAAGCTGAAACAGAAG+TGG | - | chr8_1:59085987-59086006 | None:intergenic | 40.0% | |
| GAAAGAACCCATATTCTGAG+AGG | - | chr8_1:59086011-59086030 | None:intergenic | 40.0% | |
| !! | TCCAGGAGCACCATATTATA+GGG | + | chr8_1:59086036-59086055 | Msa1203870:CDS | 40.0% |
| GGTATGAGAACAACAAAGGA+TGG | + | chr8_1:59086071-59086090 | Msa1203870:CDS | 40.0% | |
| ! | GAATGGTGTTAAACCAGACA+TGG | - | chr8_1:59086149-59086168 | None:intergenic | 40.0% |
| ! | TCTGGTTTAACACCATTCAG+TGG | + | chr8_1:59086151-59086170 | Msa1203870:CDS | 40.0% |
| ATTGTTCTTCCACCACTGAA+TGG | - | chr8_1:59086166-59086185 | None:intergenic | 40.0% | |
| ! | TCAGCTTCATCCCATTTTGA+AGG | - | chr8_1:59086190-59086209 | None:intergenic | 40.0% |
| AATGGGATGAAGCTGAAAGA+TGG | + | chr8_1:59086194-59086213 | Msa1203870:CDS | 40.0% | |
| TCAGCATATGATGCTGAAAC+TGG | - | chr8_1:59086229-59086248 | None:intergenic | 40.0% | |
| CGTAGACCTAAGTCAATTAG+TGG | + | chr8_1:59086292-59086311 | Msa1203870:CDS | 40.0% | |
| !!! | GTGAGTTCACCTTTTTCAAC+TGG | + | chr8_1:59086409-59086428 | Msa1203870:CDS | 40.0% |
| AACCATAAACCGTACCATGT+GGG | - | chr8_1:59086486-59086505 | None:intergenic | 40.0% | |
| TAACCATAAACCGTACCATG+TGG | - | chr8_1:59086487-59086506 | None:intergenic | 40.0% | |
| AATTCTGTGATCAACCAGAG+TGG | + | chr8_1:59086535-59086554 | Msa1203870:CDS | 40.0% | |
| ACATAGCAAATCAGGTTCAG+TGG | - | chr8_1:59086581-59086600 | None:intergenic | 40.0% | |
| TGAGGAAACTGAGATGTCTT+TGG | + | chr8_1:59086907-59086926 | Msa1203870:CDS | 40.0% | |
| !! | GCATCATTCTCTGTTTCTGT+AGG | - | chr8_1:59086965-59086984 | None:intergenic | 40.0% |
| TTCTTGATCTATGGCTGAAG+TGG | - | chr8_1:59087011-59087030 | None:intergenic | 40.0% | |
| ! | TGAGTGACTTTTGGTCAATC+TGG | - | chr8_1:59087119-59087138 | None:intergenic | 40.0% |
| TTGATGCTCCAGTTTCATGT+TGG | + | chr8_1:59087170-59087189 | Msa1203870:CDS | 40.0% | |
| TGATGCTCCAGTTTCATGTT+GGG | + | chr8_1:59087171-59087190 | Msa1203870:CDS | 40.0% | |
| GGATATTGAAGAGTCAACCT+TGG | + | chr8_1:59087192-59087211 | Msa1203870:CDS | 40.0% | |
| GCGACAAAGAAAGATGCTTA+TGG | - | chr8_1:59087385-59087404 | None:intergenic | 40.0% | |
| TAAGCATCTTTCTTTGTCGC+AGG | + | chr8_1:59087385-59087404 | Msa1203870:intron | 40.0% | |
| AGGAAGCCAAAATCATTGCT+TGG | + | chr8_1:59087418-59087437 | Msa1203870:CDS | 40.0% | |
| GGAAGCCAAAATCATTGCTT+GGG | + | chr8_1:59087419-59087438 | Msa1203870:CDS | 40.0% | |
| TAACTGTATAGAACCACAGC+AGG | + | chr8_1:59087662-59087681 | Msa1203870:intron | 40.0% | |
| AACTGTATAGAACCACAGCA+GGG | + | chr8_1:59087663-59087682 | Msa1203870:intron | 40.0% | |
| GAAGAAGAGATCCTCTACAA+TGG | + | chr8_1:59087745-59087764 | Msa1203870:CDS | 40.0% | |
| ! | GCTTGATGTTCTTGTTGTAC+AGG | - | chr8_1:59087833-59087852 | None:intergenic | 40.0% |
| ACCTTATCTGTGGATACTTG+GGG | - | chr8_1:59087883-59087902 | None:intergenic | 40.0% | |
| GACCTTATCTGTGGATACTT+GGG | - | chr8_1:59087884-59087903 | None:intergenic | 40.0% | |
| AGACCTTATCTGTGGATACT+TGG | - | chr8_1:59087885-59087904 | None:intergenic | 40.0% | |
| CTCACTCAGTGTCATCAAGA+AGG | + | chr8_1:59085949-59085968 | Msa1203870:CDS | 45.0% | |
| TGAAGCTGAAACAGAAGTGG+AGG | - | chr8_1:59085984-59086003 | None:intergenic | 45.0% | |
| AATATGGTGCTCCTGGACTT+GGG | - | chr8_1:59086033-59086052 | None:intergenic | 45.0% | |
| TAATATGGTGCTCCTGGACT+TGG | - | chr8_1:59086034-59086053 | None:intergenic | 45.0% | |
| !! | GTCCAGGAGCACCATATTAT+AGG | + | chr8_1:59086035-59086054 | Msa1203870:CDS | 45.0% |
| TCCCTATAATATGGTGCTCC+TGG | - | chr8_1:59086040-59086059 | None:intergenic | 45.0% | |
| GGTTTAACACCATTCAGTGG+TGG | + | chr8_1:59086154-59086173 | Msa1203870:CDS | 45.0% | |
| TTTGAGTAGAAAGCCACTCC+AGG | - | chr8_1:59086334-59086353 | None:intergenic | 45.0% | |
| TGGTGAACAGAAACAGCAAC+AGG | - | chr8_1:59086445-59086464 | None:intergenic | 45.0% | |
| ! | GATGATGATGATGACCCACA+TGG | + | chr8_1:59086469-59086488 | Msa1203870:CDS | 45.0% |
| ! | TGATGATGACCCACATGGTA+CGG | + | chr8_1:59086474-59086493 | Msa1203870:CDS | 45.0% |
| TGATCAACCAGAGTGGTGTA+AGG | + | chr8_1:59086542-59086561 | Msa1203870:CDS | 45.0% | |
| GATCAACCAGAGTGGTGTAA+GGG | + | chr8_1:59086543-59086562 | Msa1203870:CDS | 45.0% | |
| ATGAATCCCTTACACCACTC+TGG | - | chr8_1:59086552-59086571 | None:intergenic | 45.0% | |
| GAAGGGTCACATAGCAAATC+AGG | - | chr8_1:59086589-59086608 | None:intergenic | 45.0% | |
| CTTGAGAGGTTGGAGATGAA+GGG | - | chr8_1:59086606-59086625 | None:intergenic | 45.0% | |
| GTGCTGTGGCGTAAAACAAT+TGG | - | chr8_1:59086798-59086817 | None:intergenic | 45.0% | |
| ! | GTTGTCAAATAGTGGTGCTG+TGG | - | chr8_1:59086812-59086831 | None:intergenic | 45.0% |
| TTTGCAGACGAGGAACATGA+TGG | + | chr8_1:59086875-59086894 | Msa1203870:intron | 45.0% | |
| ! | GCTGAAGTGGCAGAAGATTT+TGG | - | chr8_1:59086998-59087017 | None:intergenic | 45.0% |
| ACTAGAAGTCAGAGATGTGG+AGG | + | chr8_1:59087048-59087067 | Msa1203870:CDS | 45.0% | |
| ACAGTCAAGCTACTGTTACC+AGG | + | chr8_1:59087074-59087093 | Msa1203870:CDS | 45.0% | |
| CAGTCAAGCTACTGTTACCA+GGG | + | chr8_1:59087075-59087094 | Msa1203870:CDS | 45.0% | |
| AGTCAAGCTACTGTTACCAG+GGG | + | chr8_1:59087076-59087095 | Msa1203870:CDS | 45.0% | |
| CAATCTGGCTACATGTCTCT+TGG | - | chr8_1:59087104-59087123 | None:intergenic | 45.0% | |
| !! | GACATACTTGGAAGTGTCCA+AGG | - | chr8_1:59087212-59087231 | None:intergenic | 45.0% |
| AGCTGCAGTACGAAAACTTG+AGG | + | chr8_1:59087467-59087486 | Msa1203870:CDS | 45.0% | |
| ACTGTATAGAACCACAGCAG+GGG | + | chr8_1:59087664-59087683 | Msa1203870:intron | 45.0% | |
| TCCCCAAGTATCCACAGATA+AGG | + | chr8_1:59087879-59087898 | Msa1203870:CDS | 45.0% | |
| CTGCTTAGAGACCTTATCTG+TGG | - | chr8_1:59087893-59087912 | None:intergenic | 45.0% | |
| TTAATGCCCCTTGATGCAGT+TGG | + | chr8_1:59088000-59088019 | Msa1203870:three_prime_UTR | 45.0% | |
| ACACATGCCAACTGCATCAA+GGG | - | chr8_1:59088010-59088029 | None:intergenic | 45.0% | |
| AACACATGCCAACTGCATCA+AGG | - | chr8_1:59088011-59088030 | None:intergenic | 45.0% | |
| CTCACTCAGTGTCATCAAGA+AGG | + | chr8_1:59085949-59085968 | Msa1203870:CDS | 45.0% | |
| TGAAGCTGAAACAGAAGTGG+AGG | - | chr8_1:59085984-59086003 | None:intergenic | 45.0% | |
| AATATGGTGCTCCTGGACTT+GGG | - | chr8_1:59086033-59086052 | None:intergenic | 45.0% | |
| TAATATGGTGCTCCTGGACT+TGG | - | chr8_1:59086034-59086053 | None:intergenic | 45.0% | |
| !! | GTCCAGGAGCACCATATTAT+AGG | + | chr8_1:59086035-59086054 | Msa1203870:CDS | 45.0% |
| TCCCTATAATATGGTGCTCC+TGG | - | chr8_1:59086040-59086059 | None:intergenic | 45.0% | |
| GGTTTAACACCATTCAGTGG+TGG | + | chr8_1:59086154-59086173 | Msa1203870:CDS | 45.0% | |
| TTTGAGTAGAAAGCCACTCC+AGG | - | chr8_1:59086334-59086353 | None:intergenic | 45.0% | |
| TGGTGAACAGAAACAGCAAC+AGG | - | chr8_1:59086445-59086464 | None:intergenic | 45.0% | |
| ! | GATGATGATGATGACCCACA+TGG | + | chr8_1:59086469-59086488 | Msa1203870:CDS | 45.0% |
| ! | TGATGATGACCCACATGGTA+CGG | + | chr8_1:59086474-59086493 | Msa1203870:CDS | 45.0% |
| TGATCAACCAGAGTGGTGTA+AGG | + | chr8_1:59086542-59086561 | Msa1203870:CDS | 45.0% | |
| GATCAACCAGAGTGGTGTAA+GGG | + | chr8_1:59086543-59086562 | Msa1203870:CDS | 45.0% | |
| ATGAATCCCTTACACCACTC+TGG | - | chr8_1:59086552-59086571 | None:intergenic | 45.0% | |
| GAAGGGTCACATAGCAAATC+AGG | - | chr8_1:59086589-59086608 | None:intergenic | 45.0% | |
| CTTGAGAGGTTGGAGATGAA+GGG | - | chr8_1:59086606-59086625 | None:intergenic | 45.0% | |
| GTGCTGTGGCGTAAAACAAT+TGG | - | chr8_1:59086798-59086817 | None:intergenic | 45.0% | |
| ! | GTTGTCAAATAGTGGTGCTG+TGG | - | chr8_1:59086812-59086831 | None:intergenic | 45.0% |
| TTTGCAGACGAGGAACATGA+TGG | + | chr8_1:59086875-59086894 | Msa1203870:intron | 45.0% | |
| ! | GCTGAAGTGGCAGAAGATTT+TGG | - | chr8_1:59086998-59087017 | None:intergenic | 45.0% |
| ACTAGAAGTCAGAGATGTGG+AGG | + | chr8_1:59087048-59087067 | Msa1203870:CDS | 45.0% | |
| ACAGTCAAGCTACTGTTACC+AGG | + | chr8_1:59087074-59087093 | Msa1203870:CDS | 45.0% | |
| CAGTCAAGCTACTGTTACCA+GGG | + | chr8_1:59087075-59087094 | Msa1203870:CDS | 45.0% | |
| AGTCAAGCTACTGTTACCAG+GGG | + | chr8_1:59087076-59087095 | Msa1203870:CDS | 45.0% | |
| CAATCTGGCTACATGTCTCT+TGG | - | chr8_1:59087104-59087123 | None:intergenic | 45.0% | |
| !! | GACATACTTGGAAGTGTCCA+AGG | - | chr8_1:59087212-59087231 | None:intergenic | 45.0% |
| AGCTGCAGTACGAAAACTTG+AGG | + | chr8_1:59087467-59087486 | Msa1203870:CDS | 45.0% | |
| ACTGTATAGAACCACAGCAG+GGG | + | chr8_1:59087664-59087683 | Msa1203870:intron | 45.0% | |
| TCCCCAAGTATCCACAGATA+AGG | + | chr8_1:59087879-59087898 | Msa1203870:CDS | 45.0% | |
| CTGCTTAGAGACCTTATCTG+TGG | - | chr8_1:59087893-59087912 | None:intergenic | 45.0% | |
| TTAATGCCCCTTGATGCAGT+TGG | + | chr8_1:59088000-59088019 | Msa1203870:three_prime_UTR | 45.0% | |
| ACACATGCCAACTGCATCAA+GGG | - | chr8_1:59088010-59088029 | None:intergenic | 45.0% | |
| AACACATGCCAACTGCATCA+AGG | - | chr8_1:59088011-59088030 | None:intergenic | 45.0% | |
| ATGGGTTCTTTCCCAAGTCC+AGG | + | chr8_1:59086019-59086038 | Msa1203870:CDS | 50.0% | |
| AGCAGAAGACACACCATGTC+TGG | + | chr8_1:59086133-59086152 | Msa1203870:CDS | 50.0% | |
| ACTCCAGGAGGAGGAACAAT+TGG | - | chr8_1:59086319-59086338 | None:intergenic | 50.0% | |
| AATTGTTCCTCCTCCTGGAG+TGG | + | chr8_1:59086318-59086337 | Msa1203870:CDS | 50.0% | |
| GACCCACATGGTACGGTTTA+TGG | + | chr8_1:59086481-59086500 | Msa1203870:CDS | 50.0% | |
| CCTTGAGAGGTTGGAGATGA+AGG | - | chr8_1:59086607-59086626 | None:intergenic | 50.0% | |
| CCTTCATCTCCAACCTCTCA+AGG | + | chr8_1:59086604-59086623 | Msa1203870:CDS | 50.0% | |
| TACATGTCTCTTGGATCCCC+TGG | - | chr8_1:59087095-59087114 | None:intergenic | 50.0% | |
| TTGTCGCAGGTTACAGAGAG+AGG | + | chr8_1:59087398-59087417 | Msa1203870:intron | 50.0% | |
| ATTTACAAGTGCCCCTGCTG+TGG | - | chr8_1:59087678-59087697 | None:intergenic | 50.0% | |
| CACATGCCAACTGCATCAAG+GGG | - | chr8_1:59088009-59088028 | None:intergenic | 50.0% | |
| ATGGGTTCTTTCCCAAGTCC+AGG | + | chr8_1:59086019-59086038 | Msa1203870:CDS | 50.0% | |
| AGCAGAAGACACACCATGTC+TGG | + | chr8_1:59086133-59086152 | Msa1203870:CDS | 50.0% | |
| ACTCCAGGAGGAGGAACAAT+TGG | - | chr8_1:59086319-59086338 | None:intergenic | 50.0% | |
| AATTGTTCCTCCTCCTGGAG+TGG | + | chr8_1:59086318-59086337 | Msa1203870:CDS | 50.0% | |
| GACCCACATGGTACGGTTTA+TGG | + | chr8_1:59086481-59086500 | Msa1203870:CDS | 50.0% | |
| CCTTGAGAGGTTGGAGATGA+AGG | - | chr8_1:59086607-59086626 | None:intergenic | 50.0% | |
| CCTTCATCTCCAACCTCTCA+AGG | + | chr8_1:59086604-59086623 | Msa1203870:CDS | 50.0% | |
| TACATGTCTCTTGGATCCCC+TGG | - | chr8_1:59087095-59087114 | None:intergenic | 50.0% | |
| TTGTCGCAGGTTACAGAGAG+AGG | + | chr8_1:59087398-59087417 | Msa1203870:intron | 50.0% | |
| ATTTACAAGTGCCCCTGCTG+TGG | - | chr8_1:59087678-59087697 | None:intergenic | 50.0% | |
| CACATGCCAACTGCATCAAG+GGG | - | chr8_1:59088009-59088028 | None:intergenic | 50.0% | |
| GGTCCAATTGTTCCTCCTCC+TGG | + | chr8_1:59086313-59086332 | Msa1203870:CDS | 55.0% | |
| TAGAAAGCCACTCCAGGAGG+AGG | - | chr8_1:59086328-59086347 | None:intergenic | 55.0% | |
| GAGTAGAAAGCCACTCCAGG+AGG | - | chr8_1:59086331-59086350 | None:intergenic | 55.0% | |
| GGTCCAATTGTTCCTCCTCC+TGG | + | chr8_1:59086313-59086332 | Msa1203870:CDS | 55.0% | |
| TAGAAAGCCACTCCAGGAGG+AGG | - | chr8_1:59086328-59086347 | None:intergenic | 55.0% | |
| GAGTAGAAAGCCACTCCAGG+AGG | - | chr8_1:59086331-59086350 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 59085897 | 59088144 | 59085897 | ID=Msa1203870;Name=Msa1203870 |
| chr8_1 | mRNA | 59085897 | 59088144 | 59085897 | ID=Msa1203870-mRNA-1;Parent=Msa1203870;Name=Msa1203870-mRNA-1;_AED=0.01;_eAED=0.01;_QI=38|1|1|1|1|1|4|207|439 |
| chr8_1 | exon | 59085897 | 59086625 | 59085897 | ID=Msa1203870-mRNA-1:exon:19076;Parent=Msa1203870-mRNA-1 |
| chr8_1 | exon | 59086882 | 59087224 | 59086882 | ID=Msa1203870-mRNA-1:exon:19077;Parent=Msa1203870-mRNA-1 |
| chr8_1 | exon | 59087407 | 59087488 | 59087407 | ID=Msa1203870-mRNA-1:exon:19078;Parent=Msa1203870-mRNA-1 |
| chr8_1 | exon | 59087734 | 59088144 | 59087734 | ID=Msa1203870-mRNA-1:exon:19079;Parent=Msa1203870-mRNA-1 |
| chr8_1 | five_prime_UTR | 59085897 | 59085934 | 59085897 | ID=Msa1203870-mRNA-1:five_prime_utr;Parent=Msa1203870-mRNA-1 |
| chr8_1 | CDS | 59085935 | 59086625 | 59085935 | ID=Msa1203870-mRNA-1:cds;Parent=Msa1203870-mRNA-1 |
| chr8_1 | CDS | 59086882 | 59087224 | 59086882 | ID=Msa1203870-mRNA-1:cds;Parent=Msa1203870-mRNA-1 |
| chr8_1 | CDS | 59087407 | 59087488 | 59087407 | ID=Msa1203870-mRNA-1:cds;Parent=Msa1203870-mRNA-1 |
| chr8_1 | CDS | 59087734 | 59087937 | 59087734 | ID=Msa1203870-mRNA-1:cds;Parent=Msa1203870-mRNA-1 |
| chr8_1 | three_prime_UTR | 59087938 | 59088144 | 59087938 | ID=Msa1203870-mRNA-1:three_prime_utr;Parent=Msa1203870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
