Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1205210 | XP_024636505.1 | 63.768 | 138 | 15 | 2 | 1 | 103 | 1 | 138 | 1.59e-43 | 152 |
| Msa1205210 | XP_024636505.1 | 94.444 | 72 | 4 | 0 | 105 | 176 | 47 | 118 | 5.03e-39 | 140 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1205210 | Msa1297180 | 0.895928 | 6.007931e-76 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1205210 | MtrunA17_Chr4g0054221 | 63.768 | 138 | 15 | 2 | 1 | 103 | 1 | 138 | 1.46e-47 | 152 |
| Msa1205210 | MtrunA17_Chr4g0054221 | 94.444 | 72 | 4 | 0 | 105 | 176 | 47 | 118 | 4.63e-43 | 140 |
| Msa1205210 | MtrunA17_Chr4g0054211 | 44.643 | 112 | 34 | 4 | 4 | 87 | 5 | 116 | 1.23e-17 | 75.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 44 sgRNAs with CRISPR-Local
Find 385 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTACTTCTAGAATAAATA+AGG | 0.236749 | 8_1:+61348823 | None:intergenic |
| ACCTTTACCAGGAACCTTAA+TGG | 0.240275 | 8_1:+61349161 | None:intergenic |
| GCAAAGGAAGCAAGCTCATC+AGG | 0.362279 | 8_1:-61349196 | Msa1205210:CDS |
| GGTACATGAAGGCACCATTA+AGG | 0.367361 | 8_1:-61349175 | Msa1205210:CDS |
| TCTACTTCTAGAATAAATAA+GGG | 0.375891 | 8_1:+61348824 | None:intergenic |
| CGGAGTCGCAGTGTTGGAAT+TGG | 0.390004 | 8_1:-61343301 | Msa1205210:CDS |
| GATGAAAATCGTGTTGAGTT+AGG | 0.392028 | 8_1:-61343346 | Msa1205210:CDS |
| CACAAGTGATGATGATTTCA+AGG | 0.407959 | 8_1:-61349006 | Msa1205210:CDS |
| GTAGGACATCCCATGGTTGC+AGG | 0.417097 | 8_1:+61343475 | None:intergenic |
| TCGTAAGGGCTGCGTCGCTT+AGG | 0.434996 | 8_1:-61348980 | Msa1205210:CDS |
| CACAAGTGATGATGATTTCA+AGG | 0.436445 | 8_1:-61343401 | Msa1205210:CDS |
| GAAGGCACCATTAAGGTTCC+TGG | 0.439699 | 8_1:-61349168 | Msa1205210:CDS |
| CGCAACTTTACTCCTTTCCT+AGG | 0.451673 | 8_1:-61343453 | Msa1205210:CDS |
| ACCATTAAGGTTCCTGGTAA+AGG | 0.453532 | 8_1:-61349162 | Msa1205210:CDS |
| AGATGAAAATCGTGTTGAGT+TGG | 0.472358 | 8_1:-61348952 | Msa1205210:CDS |
| AGGATTCGATGAAAGTTCTT+CGG | 0.483792 | 8_1:-61348926 | Msa1205210:CDS |
| CTATGTAGATCCTGCAACCA+TGG | 0.486263 | 8_1:-61343485 | Msa1205210:intron |
| GATGAAAATCGTGTTGAGTT+GGG | 0.495351 | 8_1:-61348951 | Msa1205210:CDS |
| AAGGTTCCTGGTAAAGGTAA+AGG | 0.501075 | 8_1:-61349156 | Msa1205210:CDS |
| CGGAGTCACAGTGTTGGCAT+TGG | 0.501191 | 8_1:-61348906 | Msa1205210:CDS |
| AAATCGTGTTGAGTTGGGTA+AGG | 0.512990 | 8_1:-61348946 | Msa1205210:CDS |
| GTCACAGTGTTGGCATTGGA+AGG | 0.517691 | 8_1:-61348902 | Msa1205210:CDS |
| GAGTTAACACTGAAGCTCCT+AGG | 0.519744 | 8_1:+61343436 | None:intergenic |
| TCGTAAGGGCTGCGTCACTT+AGG | 0.537263 | 8_1:-61343375 | Msa1205210:CDS |
| GTGCCTCGGAGTCGCAGTGT+TGG | 0.539129 | 8_1:-61343307 | Msa1205210:CDS |
| ACATGTCCTTTACCTTTACC+AGG | 0.540520 | 8_1:+61349150 | None:intergenic |
| ATGATTTCAAGGAACTCGTA+AGG | 0.547916 | 8_1:-61343390 | Msa1205210:CDS |
| ATGATTTCAAGGAACTCGTA+AGG | 0.547916 | 8_1:-61348995 | Msa1205210:CDS |
| TGAAGATGATGATAATATCA+AGG | 0.548852 | 8_1:-61348853 | Msa1205210:CDS |
| TATGTAGATCCTGCAACCAT+GGG | 0.570418 | 8_1:-61343484 | Msa1205210:intron |
| CTTGAAATCATCATCACTTG+TGG | 0.574189 | 8_1:+61349007 | None:intergenic |
| CTTGAAATCATCATCACTTG+TGG | 0.583473 | 8_1:+61343402 | None:intergenic |
| GTCGCAGTGTTGGAATTGGA+AGG | 0.585409 | 8_1:-61343297 | Msa1205210:CDS |
| CTACTTCTAGAATAAATAAG+GGG | 0.599593 | 8_1:+61348825 | None:intergenic |
| GTTCTTCGGAGTCACAGTGT+TGG | 0.605231 | 8_1:-61348912 | Msa1205210:CDS |
| AACACTGAAGCTCCTAGGAA+AGG | 0.606093 | 8_1:+61343441 | None:intergenic |
| GGAAAGGAGTAAAGTTGCGT+AGG | 0.616682 | 8_1:+61343457 | None:intergenic |
| CGAAAGCGATGAAAGTGCCT+CGG | 0.617025 | 8_1:-61343321 | Msa1205210:CDS |
| CAAGCTCATCAGGTACATGA+AGG | 0.617983 | 8_1:-61349186 | Msa1205210:CDS |
| TGATTTCAAGGAACTCGTAA+GGG | 0.632665 | 8_1:-61343389 | Msa1205210:CDS |
| TGATTTCAAGGAACTCGTAA+GGG | 0.632665 | 8_1:-61348994 | Msa1205210:CDS |
| AAGTTGCGTAGGACATCCCA+TGG | 0.638342 | 8_1:+61343468 | None:intergenic |
| ATTCCAACACTGCGACTCCG+AGG | 0.689214 | 8_1:+61343304 | None:intergenic |
| TGGAAGGATTGAAGAAGACG+AGG | 0.696092 | 8_1:-61348886 | Msa1205210:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATAATCATGATTAATT+TGG | + | chr8_1:61347015-61347034 | None:intergenic | 10.0% |
| !!! | TTAGATTTTTTTTTTATTGT+TGG | + | chr8_1:61347048-61347067 | None:intergenic | 10.0% |
| !!! | AGTTTTAAAAACAATTATAT+TGG | + | chr8_1:61347626-61347645 | None:intergenic | 10.0% |
| !!! | TTTAAAACTAATCATATTAA+AGG | - | chr8_1:61347637-61347656 | Msa1205210:intron | 10.0% |
| !! | TTAAAACTAATCATATTAAA+GGG | - | chr8_1:61347638-61347657 | Msa1205210:intron | 10.0% |
| !!! | AAATATGTTTTAATTATAAC+AGG | - | chr8_1:61348843-61348862 | Msa1205210:CDS | 10.0% |
| !! | AATCTTAATTAATATGATAT+TGG | - | chr8_1:61349129-61349148 | Msa1205210:intron | 10.0% |
| !!! | GAATTTTTAATCTTTTTTAG+AGG | - | chr8_1:61343421-61343440 | Msa1205210:CDS | 15.0% |
| !! | TTGACATAAAGTTAATAATA+GGG | + | chr8_1:61343947-61343966 | None:intergenic | 15.0% |
| !! | ATTGACATAAAGTTAATAAT+AGG | + | chr8_1:61343948-61343967 | None:intergenic | 15.0% |
| !! | ATGCATAATAAAATATCAAA+TGG | - | chr8_1:61344297-61344316 | Msa1205210:intron | 15.0% |
| !! | TAACATTTGAAAATTATGAA+CGG | - | chr8_1:61344656-61344675 | Msa1205210:intron | 15.0% |
| !! | ATCTTTATTATGGATATAAT+TGG | - | chr8_1:61344845-61344864 | Msa1205210:intron | 15.0% |
| !!! | GCATATAATGATTTTTAAAA+AGG | + | chr8_1:61345578-61345597 | None:intergenic | 15.0% |
| !! | AACATTAAACTTATTTATGA+TGG | + | chr8_1:61346087-61346106 | None:intergenic | 15.0% |
| !! | GTTTAAAAAAAAAGGATAAA+GGG | - | chr8_1:61346734-61346753 | Msa1205210:intron | 15.0% |
| !! | TATAGAAAAAGTTGTTTAAT+TGG | - | chr8_1:61347105-61347124 | Msa1205210:intron | 15.0% |
| !! | ATAGAAAAAGTTGTTTAATT+GGG | - | chr8_1:61347106-61347125 | Msa1205210:intron | 15.0% |
| !!! | TTACACTTTTTAAATGATAA+AGG | - | chr8_1:61347166-61347185 | Msa1205210:intron | 15.0% |
| !!! | TACACTTTTTAAATGATAAA+GGG | - | chr8_1:61347167-61347186 | Msa1205210:intron | 15.0% |
| !! | ATATATATATATATAGAGTC+AGG | - | chr8_1:61347267-61347286 | Msa1205210:intron | 15.0% |
| !! | TTTAAAAACAATTATATTGG+AGG | + | chr8_1:61347623-61347642 | None:intergenic | 15.0% |
| !!! | AATTCAATTGTTTTAAATCA+TGG | - | chr8_1:61347662-61347681 | Msa1205210:intron | 15.0% |
| !! | TTGAGTTTATAAATCAATTT+GGG | + | chr8_1:61347760-61347779 | None:intergenic | 15.0% |
| !! | ATTGAGTTTATAAATCAATT+TGG | + | chr8_1:61347761-61347780 | None:intergenic | 15.0% |
| !! | AATAAAATAAAAGAATGTGA+TGG | - | chr8_1:61347992-61348011 | Msa1205210:intron | 15.0% |
| !! | TATATATATATATATGAGTC+AGG | + | chr8_1:61348142-61348161 | None:intergenic | 15.0% |
| !! | TTTAAAAAATGGTAATTAGA+GGG | + | chr8_1:61348326-61348345 | None:intergenic | 15.0% |
| !!! | TTCAAGATTACTTTAAAAAA+TGG | + | chr8_1:61348337-61348356 | None:intergenic | 15.0% |
| !! | ATATTTATTAACTAAAGTGA+AGG | + | chr8_1:61349031-61349050 | None:intergenic | 15.0% |
| !!! | TCTACTTCTAGAATAAATAA+GGG | + | chr8_1:61343195-61343214 | None:intergenic | 20.0% |
| !!! | TTCTACTTCTAGAATAAATA+AGG | + | chr8_1:61343196-61343215 | None:intergenic | 20.0% |
| !! | ATTCACATATTGTTTATTCA+TGG | - | chr8_1:61343382-61343401 | Msa1205210:CDS | 20.0% |
| !! | TTCACATATTGTTTATTCAT+GGG | - | chr8_1:61343383-61343402 | Msa1205210:CDS | 20.0% |
| !!! | TTAATCTTTTTTAGAGGAAT+TGG | - | chr8_1:61343427-61343446 | Msa1205210:CDS | 20.0% |
| !!! | TTTCTTTCATTGACTTTATT+TGG | + | chr8_1:61343625-61343644 | None:intergenic | 20.0% |
| !! | GTAATAATTAATGACATGAA+TGG | + | chr8_1:61344016-61344035 | None:intergenic | 20.0% |
| !! | TATCTTGTTAATTATACGAA+TGG | + | chr8_1:61344210-61344229 | None:intergenic | 20.0% |
| !! | CTATCTTAATAAACTTAAAG+AGG | + | chr8_1:61344327-61344346 | None:intergenic | 20.0% |
| !!! | TATGCTTTTTAAAGGATAAA+AGG | - | chr8_1:61344908-61344927 | Msa1205210:intron | 20.0% |
| !! | ATAGTATAACAACATATTCT+TGG | - | chr8_1:61344942-61344961 | Msa1205210:intron | 20.0% |
| !!! | GATGGTGAAAATATATTTTT+TGG | - | chr8_1:61345304-61345323 | Msa1205210:intron | 20.0% |
| !! | ATCTGATATATATCACATAA+AGG | + | chr8_1:61345351-61345370 | None:intergenic | 20.0% |
| !! | TGAATTTACTATTATACCTA+TGG | - | chr8_1:61345485-61345504 | Msa1205210:intron | 20.0% |
| !! | CAAAGATAATATTAAGGAAA+AGG | + | chr8_1:61346686-61346705 | None:intergenic | 20.0% |
| !!! | CTTTTCCTTAATATTATCTT+TGG | - | chr8_1:61346684-61346703 | Msa1205210:intron | 20.0% |
| !! | GGTTTAAAAAAAAAGGATAA+AGG | - | chr8_1:61346733-61346752 | Msa1205210:intron | 20.0% |
| !! | TCTATAATAAAAATCGTTGT+TGG | + | chr8_1:61347091-61347110 | None:intergenic | 20.0% |
| !! | TTCATAAATTCTACACAAAT+TGG | - | chr8_1:61347818-61347837 | Msa1205210:intron | 20.0% |
| !! | TCATAAATTCTACACAAATT+GGG | - | chr8_1:61347819-61347838 | Msa1205210:intron | 20.0% |
| !!! | CTTTAAAAAATGGTAATTAG+AGG | + | chr8_1:61348327-61348346 | None:intergenic | 20.0% |
| !! | TAATCTTGAACCTATATAAA+AGG | - | chr8_1:61348347-61348366 | Msa1205210:intron | 20.0% |
| ! | ACAAAAAAAGATAAGAGCAA+AGG | - | chr8_1:61342804-61342823 | Msa1205210:intron | 25.0% |
| ! | TGAAGATGATGATAATATCA+AGG | - | chr8_1:61343163-61343182 | Msa1205210:intron | 25.0% |
| !!! | CTACTTCTAGAATAAATAAG+GGG | + | chr8_1:61343194-61343213 | None:intergenic | 25.0% |
| ! | TAAAGTCAATGAAAGAAACA+AGG | - | chr8_1:61343627-61343646 | Msa1205210:intron | 25.0% |
| ! | TTTGGAAATAAACTGTCATT+TGG | + | chr8_1:61343703-61343722 | None:intergenic | 25.0% |
| ! | AGTTTATTTCCAAAAGATGA+TGG | - | chr8_1:61343709-61343728 | Msa1205210:intron | 25.0% |
| ! | TCCAAATATAGGAGAAATAT+TGG | + | chr8_1:61343807-61343826 | None:intergenic | 25.0% |
| ! | ACATAAAGTTAATAATAGGG+TGG | + | chr8_1:61343944-61343963 | None:intergenic | 25.0% |
| ! | TATTAAGATAGATCTGTGTT+AGG | - | chr8_1:61344336-61344355 | Msa1205210:intron | 25.0% |
| !! | CTCATATCTAAAGTTACTAA+AGG | - | chr8_1:61344511-61344530 | Msa1205210:intron | 25.0% |
| ! | AAAGTTAGTCAATCTATTTC+CGG | - | chr8_1:61344544-61344563 | Msa1205210:intron | 25.0% |
| ! | GTCATTGAAATAGATAATCA+TGG | + | chr8_1:61344763-61344782 | None:intergenic | 25.0% |
| ! | ACCAACAACAATCTTTATTA+TGG | - | chr8_1:61344835-61344854 | Msa1205210:intron | 25.0% |
| ! | TCCATAATAAAGATTGTTGT+TGG | + | chr8_1:61344839-61344858 | None:intergenic | 25.0% |
| !! | GATGCATCAAAAATTTTATC+TGG | - | chr8_1:61344993-61345012 | Msa1205210:intron | 25.0% |
| !! | ATCAAAAATTTTATCTGGAG+TGG | - | chr8_1:61344998-61345017 | Msa1205210:intron | 25.0% |
| !!! | ATATTTTTTGGACTGATAGA+TGG | - | chr8_1:61345316-61345335 | Msa1205210:intron | 25.0% |
| ! | GATATATATCACATAAAGGA+GGG | + | chr8_1:61345347-61345366 | None:intergenic | 25.0% |
| ! | TGATATATATCACATAAAGG+AGG | + | chr8_1:61345348-61345367 | None:intergenic | 25.0% |
| !! | GAATGTGCAAATGAAAATTT+TGG | + | chr8_1:61345422-61345441 | None:intergenic | 25.0% |
| !! | ATTTTCATTTGCACATTCAT+TGG | - | chr8_1:61345424-61345443 | Msa1205210:intron | 25.0% |
| !!! | TCCAAATTTTAACTACGTAA+GGG | + | chr8_1:61345791-61345810 | None:intergenic | 25.0% |
| !!! | TTCCAAATTTTAACTACGTA+AGG | + | chr8_1:61345792-61345811 | None:intergenic | 25.0% |
| ! | GTGTAAGTTAATATTTAGAG+TGG | + | chr8_1:61345826-61345845 | None:intergenic | 25.0% |
| !! | AAAGAAGTTGGACAAATTTT+TGG | - | chr8_1:61346341-61346360 | Msa1205210:intron | 25.0% |
| ! | AGATTCTATGTTAGTAGTAA+TGG | - | chr8_1:61346372-61346391 | Msa1205210:intron | 25.0% |
| !! | ATTTCCTTCTCTGAAAATAT+GGG | + | chr8_1:61346488-61346507 | None:intergenic | 25.0% |
| ! | TTTGAACCAAAAAACTAGAA+AGG | + | chr8_1:61346585-61346604 | None:intergenic | 25.0% |
| !!! | TTTTTGGTTCAAAACAAGTT+AGG | - | chr8_1:61346592-61346611 | Msa1205210:intron | 25.0% |
| ! | TGCAACCAAAGATAATATTA+AGG | + | chr8_1:61346692-61346711 | None:intergenic | 25.0% |
| !!! | CCTTTTTTTTTAAACCAAAG+AGG | + | chr8_1:61346729-61346748 | None:intergenic | 25.0% |
| !! | CCTCTTTGGTTTAAAAAAAA+AGG | - | chr8_1:61346726-61346745 | Msa1205210:intron | 25.0% |
| ! | TATATAGACTAGCAAAAAGA+CGG | - | chr8_1:61346871-61346890 | Msa1205210:intron | 25.0% |
| ! | ATAAATGAATGGTCATGATT+TGG | + | chr8_1:61347329-61347348 | None:intergenic | 25.0% |
| ! | TTTGGATCAACATAAATGAA+TGG | + | chr8_1:61347340-61347359 | None:intergenic | 25.0% |
| !! | AGTGAATAAATGTGAACTTT+TGG | + | chr8_1:61347358-61347377 | None:intergenic | 25.0% |
| ! | ATTGAGACGATAGAAATAAA+AGG | + | chr8_1:61347500-61347519 | None:intergenic | 25.0% |
| ! | TAAATCAATTTGGGCTTATT+AGG | + | chr8_1:61347751-61347770 | None:intergenic | 25.0% |
| ! | ACAAATAGAAATGAGATCAT+TGG | + | chr8_1:61347791-61347810 | None:intergenic | 25.0% |
| !!! | ACAAATTGGGTTTTATCAAA+AGG | - | chr8_1:61347832-61347851 | Msa1205210:intron | 25.0% |
| !!! | CAAATTGGGTTTTATCAAAA+GGG | - | chr8_1:61347833-61347852 | Msa1205210:intron | 25.0% |
| !!! | AAATTGGGTTTTATCAAAAG+GGG | - | chr8_1:61347834-61347853 | Msa1205210:intron | 25.0% |
| ! | CATTGATCATAAAAGATAGA+GGG | - | chr8_1:61348069-61348088 | Msa1205210:intron | 25.0% |
| ! | AAATTAAAGTCCGTAGATAA+TGG | - | chr8_1:61348299-61348318 | Msa1205210:intron | 25.0% |
| ! | AATTAAAGTCCGTAGATAAT+GGG | - | chr8_1:61348300-61348319 | Msa1205210:intron | 25.0% |
| ! | TTCAAGATTACTTCGAAAAA+TGG | + | chr8_1:61348384-61348403 | None:intergenic | 25.0% |
| ! | ACAAAAAAAGATAAGAGCAA+AGG | - | chr8_1:61342804-61342823 | Msa1205210:intron | 25.0% |
| ! | GTAAATACTCTTCAGATTAT+AGG | - | chr8_1:61349064-61349083 | Msa1205210:intron | 25.0% |
| ! | ACAAGTACAAAAGTAATACA+AGG | + | chr8_1:61349170-61349189 | None:intergenic | 25.0% |
| !!! | ATATTTGTTTTCTCTAGTCA+CGG | - | chr8_1:61349207-61349226 | Msa1205210:CDS | 25.0% |
| ! | TTGACTTTATTTGGTGGTAA+GGG | + | chr8_1:61343616-61343635 | None:intergenic | 30.0% |
| ! | ATTGACTTTATTTGGTGGTA+AGG | + | chr8_1:61343617-61343636 | None:intergenic | 30.0% |
| !! | CTTTCATTGACTTTATTTGG+TGG | + | chr8_1:61343622-61343641 | None:intergenic | 30.0% |
| ATGAAAGAAACAAGGAATCA+AGG | - | chr8_1:61343635-61343654 | Msa1205210:intron | 30.0% | |
| AAACAAGGAATCAAGGTTAT+TGG | - | chr8_1:61343642-61343661 | Msa1205210:intron | 30.0% | |
| ! | AAACTGTCATTTGGTTGATT+TGG | + | chr8_1:61343694-61343713 | None:intergenic | 30.0% |
| !! | AAAGGTATTTGAGATACCAT+AGG | + | chr8_1:61343776-61343795 | None:intergenic | 30.0% |
| GAAATATTGGCAACATTCAA+AGG | + | chr8_1:61343794-61343813 | None:intergenic | 30.0% | |
| GCCAATATTTCTCCTATATT+TGG | - | chr8_1:61343803-61343822 | Msa1205210:intron | 30.0% | |
| CAAGTTCATCATCCAAATAT+AGG | + | chr8_1:61343818-61343837 | None:intergenic | 30.0% | |
| TAATAGGTATCATACTCCTT+GGG | + | chr8_1:61343870-61343889 | None:intergenic | 30.0% | |
| TTAATAGGTATCATACTCCT+TGG | + | chr8_1:61343871-61343890 | None:intergenic | 30.0% | |
| ATTGAAGAGTTCGTCTTAAT+AGG | + | chr8_1:61343886-61343905 | None:intergenic | 30.0% | |
| TAAAGTTAATAATAGGGTGG+TGG | + | chr8_1:61343941-61343960 | None:intergenic | 30.0% | |
| AATCAAGTCACTATGTTTGA+CGG | - | chr8_1:61343965-61343984 | Msa1205210:intron | 30.0% | |
| CGAATTTACAGTTGAAATAG+CGG | + | chr8_1:61344038-61344057 | None:intergenic | 30.0% | |
| !! | TCTCTAGGATTAGAATGAAT+AGG | - | chr8_1:61344058-61344077 | Msa1205210:intron | 30.0% |
| !! | CTCTAGGATTAGAATGAATA+GGG | - | chr8_1:61344059-61344078 | Msa1205210:intron | 30.0% |
| ! | TCTAGGATTAGAATGAATAG+GGG | - | chr8_1:61344060-61344079 | Msa1205210:intron | 30.0% |
| !! | TATGAGTCATTGATTTACGA+TGG | - | chr8_1:61344158-61344177 | Msa1205210:intron | 30.0% |
| TGTTAATTATACGAATGGCA+GGG | + | chr8_1:61344205-61344224 | None:intergenic | 30.0% | |
| TTGTTAATTATACGAATGGC+AGG | + | chr8_1:61344206-61344225 | None:intergenic | 30.0% | |
| ! | AGGATTCTCTATCTTTTTGA+TGG | - | chr8_1:61344361-61344380 | Msa1205210:intron | 30.0% |
| !! | TAGGCTGTTATGCTTTTTAA+AGG | - | chr8_1:61344900-61344919 | Msa1205210:intron | 30.0% |
| AGATCCTTTAGCAAAGATAT+TGG | + | chr8_1:61344968-61344987 | None:intergenic | 30.0% | |
| TTGTCAATTCAGATGAACAT+TGG | - | chr8_1:61345152-61345171 | Msa1205210:intron | 30.0% | |
| TGTCAATTCAGATGAACATT+GGG | - | chr8_1:61345153-61345172 | Msa1205210:intron | 30.0% | |
| ATCAAATCTCTTCCTCAATT+TGG | - | chr8_1:61345224-61345243 | Msa1205210:intron | 30.0% | |
| GACAACTCTAATTTCTTAGT+TGG | - | chr8_1:61345280-61345299 | Msa1205210:intron | 30.0% | |
| !! | TCTAATTTCTTAGTTGGTGA+TGG | - | chr8_1:61345286-61345305 | Msa1205210:intron | 30.0% |
| AAAAAGGTAAGCTTCCTTTA+GGG | + | chr8_1:61345562-61345581 | None:intergenic | 30.0% | |
| TAAAAAGGTAAGCTTCCTTT+AGG | + | chr8_1:61345563-61345582 | None:intergenic | 30.0% | |
| ATTATATGCAGAAGCTTCAT+TGG | - | chr8_1:61345589-61345608 | Msa1205210:intron | 30.0% | |
| TTATATGCAGAAGCTTCATT+GGG | - | chr8_1:61345590-61345609 | Msa1205210:intron | 30.0% | |
| AGACATAGATTGTAGATAGA+AGG | + | chr8_1:61345729-61345748 | None:intergenic | 30.0% | |
| AAGGGCAATCAAAAAACAAA+TGG | + | chr8_1:61345773-61345792 | None:intergenic | 30.0% | |
| ! | ACGTAGTTAAAATTTGGAAC+TGG | - | chr8_1:61345793-61345812 | Msa1205210:intron | 30.0% |
| TCAATGACATTGAGGAAATT+TGG | - | chr8_1:61345847-61345866 | Msa1205210:intron | 30.0% | |
| ! | TTGATGATTATCTTGCAATG+AGG | + | chr8_1:61345897-61345916 | None:intergenic | 30.0% |
| ! | CTTTTAATCCAGTTATTGAG+AGG | + | chr8_1:61346160-61346179 | None:intergenic | 30.0% |
| CTCTCAATAACTGGATTAAA+AGG | - | chr8_1:61346158-61346177 | Msa1205210:intron | 30.0% | |
| TGGATTAAAAGGAACATAGA+TGG | - | chr8_1:61346169-61346188 | Msa1205210:intron | 30.0% | |
| CTTTGTATCTCAGAAAATCT+TGG | - | chr8_1:61346256-61346275 | Msa1205210:intron | 30.0% | |
| TATCTCAGAAAATCTTGGTT+TGG | - | chr8_1:61346261-61346280 | Msa1205210:intron | 30.0% | |
| ATTTGTCCAACTTCTTTGAA+AGG | + | chr8_1:61346338-61346357 | None:intergenic | 30.0% | |
| CAAACAATGATATTGTTCCA+TGG | - | chr8_1:61346401-61346420 | Msa1205210:intron | 30.0% | |
| ! | CATTTCCTTCTCTGAAAATA+TGG | + | chr8_1:61346489-61346508 | None:intergenic | 30.0% |
| AAAAAACTAGAAAGGAAGGA+TGG | + | chr8_1:61346577-61346596 | None:intergenic | 30.0% | |
| !!! | ATCCTTCCTTTCTAGTTTTT+TGG | - | chr8_1:61346576-61346595 | Msa1205210:intron | 30.0% |
| AACCAAAAAACTAGAAAGGA+AGG | + | chr8_1:61346581-61346600 | None:intergenic | 30.0% | |
| AAGGAAACAAACCTATAGTT+AGG | + | chr8_1:61346622-61346641 | None:intergenic | 30.0% | |
| ATATAGACTAGCAAAAAGAC+GGG | - | chr8_1:61346872-61346891 | Msa1205210:intron | 30.0% | |
| !! | AAAACATCTTTTAGGAATGG+GGG | + | chr8_1:61347446-61347465 | None:intergenic | 30.0% |
| !! | CAAAACATCTTTTAGGAATG+GGG | + | chr8_1:61347447-61347466 | None:intergenic | 30.0% |
| !! | GCAAAACATCTTTTAGGAAT+GGG | + | chr8_1:61347448-61347467 | None:intergenic | 30.0% |
| ! | AGATTGGCAAAACATCTTTT+AGG | + | chr8_1:61347454-61347473 | None:intergenic | 30.0% |
| CATATCCAATTCCATGTTAA+TGG | + | chr8_1:61347563-61347582 | None:intergenic | 30.0% | |
| !!! | GCTTTTTTCTACAAATTCCA+TGG | + | chr8_1:61347590-61347609 | None:intergenic | 30.0% |
| CAATTATATTGGAGGAGAAA+AGG | + | chr8_1:61347615-61347634 | None:intergenic | 30.0% | |
| AAAAGGGGATATGTCTATAT+GGG | - | chr8_1:61347849-61347868 | Msa1205210:intron | 30.0% | |
| TTTGCTTAATTCCTCTCATA+TGG | + | chr8_1:61347884-61347903 | None:intergenic | 30.0% | |
| ATATGAGAGGAATTAAGCAA+AGG | - | chr8_1:61347883-61347902 | Msa1205210:intron | 30.0% | |
| TATGAGAGGAATTAAGCAAA+GGG | - | chr8_1:61347884-61347903 | Msa1205210:intron | 30.0% | |
| TGAAGAAAGAATAGCGATAT+TGG | - | chr8_1:61347916-61347935 | Msa1205210:intron | 30.0% | |
| AAGAATAGCGATATTGGATT+TGG | - | chr8_1:61347922-61347941 | Msa1205210:intron | 30.0% | |
| ! | CCTCTATCTTTTATGATCAA+TGG | + | chr8_1:61348071-61348090 | None:intergenic | 30.0% |
| CCATTGATCATAAAAGATAG+AGG | - | chr8_1:61348068-61348087 | Msa1205210:intron | 30.0% | |
| ! | AATTAGAGGGCCTTTTATAT+AGG | + | chr8_1:61348360-61348379 | None:intergenic | 30.0% |
| TTCGAAAAATGGCAATTAGA+GGG | + | chr8_1:61348373-61348392 | None:intergenic | 30.0% | |
| TGAAGATGATGACAATATCA+AGG | - | chr8_1:61348768-61348787 | Msa1205210:intron | 30.0% | |
| !! | TCTGCTTCTAGAATAAAGAA+GGG | + | chr8_1:61348800-61348819 | None:intergenic | 30.0% |
| !! | TTCTGCTTCTAGAATAAAGA+AGG | + | chr8_1:61348801-61348820 | None:intergenic | 30.0% |
| ! | CTAATTCACTTACACTGTTT+TGG | + | chr8_1:61348996-61349015 | None:intergenic | 30.0% |
| !! | TATTTGTTTTCTCTAGTCAC+GGG | - | chr8_1:61349208-61349227 | Msa1205210:CDS | 30.0% |
| CTTGAAATCATCATCACTTG+TGG | + | chr8_1:61343012-61343031 | None:intergenic | 35.0% | |
| ! | CACAAGTGATGATGATTTCA+AGG | - | chr8_1:61343010-61343029 | Msa1205210:intron | 35.0% |
| ATGATTTCAAGGAACTCGTA+AGG | - | chr8_1:61343021-61343040 | Msa1205210:intron | 35.0% | |
| TGATTTCAAGGAACTCGTAA+GGG | - | chr8_1:61343022-61343041 | Msa1205210:intron | 35.0% | |
| AGATGAAAATCGTGTTGAGT+TGG | - | chr8_1:61343064-61343083 | Msa1205210:intron | 35.0% | |
| GATGAAAATCGTGTTGAGTT+GGG | - | chr8_1:61343065-61343084 | Msa1205210:intron | 35.0% | |
| AGGATTCGATGAAAGTTCTT+CGG | - | chr8_1:61343090-61343109 | Msa1205210:intron | 35.0% | |
| ! | GCTTTAAACGTTGACTAAAG+AGG | + | chr8_1:61343482-61343501 | None:intergenic | 35.0% |
| ! | TTTTACTCCATCTTTGACAC+AGG | + | chr8_1:61343581-61343600 | None:intergenic | 35.0% |
| ! | ATCAAGGTTATTGGTGTCTT+TGG | - | chr8_1:61343651-61343670 | Msa1205210:intron | 35.0% |
| !!! | TCGAAAGCATTTTCATTGAC+TGG | + | chr8_1:61343736-61343755 | None:intergenic | 35.0% |
| AGTCAATGAAAATGCTTTCG+AGG | - | chr8_1:61343735-61343754 | Msa1205210:intron | 35.0% | |
| GTAGAAATGCAAAGAACCTA+TGG | - | chr8_1:61343757-61343776 | Msa1205210:intron | 35.0% | |
| AAAATAGTATGGTAGAGTGG+TGG | + | chr8_1:61343911-61343930 | None:intergenic | 35.0% | |
| GAGAAAATAGTATGGTAGAG+TGG | + | chr8_1:61343914-61343933 | None:intergenic | 35.0% | |
| GTGGAATGGAGAAAATAGTA+TGG | + | chr8_1:61343922-61343941 | None:intergenic | 35.0% | |
| !! | TTAATAATAGGGTGGTGGAA+TGG | + | chr8_1:61343936-61343955 | None:intergenic | 35.0% |
| TCAACTGTAAATTCGTCTCT+AGG | - | chr8_1:61344043-61344062 | Msa1205210:intron | 35.0% | |
| AGATAGATCTGTGTTAGGTT+AGG | - | chr8_1:61344341-61344360 | Msa1205210:intron | 35.0% | |
| ATCTATACTAGCGAAAAGAC+CGG | - | chr8_1:61344596-61344615 | Msa1205210:intron | 35.0% | |
| AATAAAAAGAGCAGAAAGGC+TGG | + | chr8_1:61344632-61344651 | None:intergenic | 35.0% | |
| GTGCAATAAAAAGAGCAGAA+AGG | + | chr8_1:61344636-61344655 | None:intergenic | 35.0% | |
| TTGGCCAATATCTTTGCTAA+AGG | - | chr8_1:61344961-61344980 | Msa1205210:intron | 35.0% | |
| !! | TCAAAGAAAGCTTGTTACAG+TGG | - | chr8_1:61345030-61345049 | Msa1205210:intron | 35.0% |
| TTATGCAGACCTTATGATGA+AGG | - | chr8_1:61345064-61345083 | Msa1205210:intron | 35.0% | |
| TATGCAGACCTTATGATGAA+GGG | - | chr8_1:61345065-61345084 | Msa1205210:intron | 35.0% | |
| AGCTTCATTGATCTTGATCA+AGG | + | chr8_1:61345107-61345126 | None:intergenic | 35.0% | |
| CAAGATTCCAACACAATTTG+AGG | + | chr8_1:61345135-61345154 | None:intergenic | 35.0% | |
| TTTCACACTACTCCAAATTG+AGG | + | chr8_1:61345239-61345258 | None:intergenic | 35.0% | |
| AGAAATATGTGAAGATGAGC+AGG | + | chr8_1:61345375-61345394 | None:intergenic | 35.0% | |
| !!! | GATATAGTCACTGACTTTTG+AGG | + | chr8_1:61345400-61345419 | None:intergenic | 35.0% |
| GTAAATTCAACAGTCTGTCT+GGG | + | chr8_1:61345474-61345493 | None:intergenic | 35.0% | |
| AGTAAATTCAACAGTCTGTC+TGG | + | chr8_1:61345475-61345494 | None:intergenic | 35.0% | |
| TTGTCTTGTCTATGATCCAT+AGG | + | chr8_1:61345504-61345523 | None:intergenic | 35.0% | |
| ATAGACAAGACAAGCTTATG+TGG | - | chr8_1:61345511-61345530 | Msa1205210:intron | 35.0% | |
| TTCATTGGGCTTCTACTATT+TGG | - | chr8_1:61345604-61345623 | Msa1205210:intron | 35.0% | |
| ! | CATGCTATCAGAGATTTTGA+AGG | + | chr8_1:61345645-61345664 | None:intergenic | 35.0% |
| CTTCAAAATCTCTGATAGCA+TGG | - | chr8_1:61345643-61345662 | Msa1205210:intron | 35.0% | |
| ACCTACAGATGAAAAGCTTA+TGG | - | chr8_1:61345686-61345705 | Msa1205210:intron | 35.0% | |
| ! | TCCATAAGCTTTTCATCTGT+AGG | + | chr8_1:61345690-61345709 | None:intergenic | 35.0% |
| GCCCTTACGTAGTTAAAATT+TGG | - | chr8_1:61345787-61345806 | Msa1205210:intron | 35.0% | |
| CTTACACTTCAATGACATTG+AGG | - | chr8_1:61345839-61345858 | Msa1205210:intron | 35.0% | |
| CACAGAGAGAATGTTTACAA+TGG | + | chr8_1:61345925-61345944 | None:intergenic | 35.0% | |
| CATTGTAAACATTCTCTCTG+TGG | - | chr8_1:61345923-61345942 | Msa1205210:intron | 35.0% | |
| TAAACATTCTCTCTGTGGTT+TGG | - | chr8_1:61345928-61345947 | Msa1205210:intron | 35.0% | |
| AGAAACTCTGCAAGATTCAA+AGG | - | chr8_1:61345957-61345976 | Msa1205210:intron | 35.0% | |
| GAAACTCTGCAAGATTCAAA+GGG | - | chr8_1:61345958-61345977 | Msa1205210:intron | 35.0% | |
| TCAAAGGGAAAGCTATTCAT+TGG | - | chr8_1:61345973-61345992 | Msa1205210:intron | 35.0% | |
| !! | TCATCTAATGTTGCTTTGTC+AGG | - | chr8_1:61346017-61346036 | Msa1205210:intron | 35.0% |
| TTAATCCAGTTATTGAGAGG+AGG | + | chr8_1:61346157-61346176 | None:intergenic | 35.0% | |
| ATATTGTTCCATGGCAGTTA+AGG | - | chr8_1:61346410-61346429 | Msa1205210:intron | 35.0% | |
| ! | CTTGCAGGGATTATTTTCTT+GGG | - | chr8_1:61346543-61346562 | Msa1205210:intron | 35.0% |
| ! | TATAGGTTTGTTTCCTTCTG+AGG | - | chr8_1:61346625-61346644 | Msa1205210:intron | 35.0% |
| ! | ATAGGTTTGTTTCCTTCTGA+GGG | - | chr8_1:61346626-61346645 | Msa1205210:intron | 35.0% |
| AAAGGAGCAGATACAAAAGA+GGG | + | chr8_1:61346668-61346687 | None:intergenic | 35.0% | |
| AAAAGGAGCAGATACAAAAG+AGG | + | chr8_1:61346669-61346688 | None:intergenic | 35.0% | |
| TACTCATGTACATTCACTGA+AGG | + | chr8_1:61347402-61347421 | None:intergenic | 35.0% | |
| !! | GGCAAAACATCTTTTAGGAA+TGG | + | chr8_1:61347449-61347468 | None:intergenic | 35.0% |
| AGCAACCATTAACATGGAAT+TGG | - | chr8_1:61347555-61347574 | Msa1205210:intron | 35.0% | |
| GTCATTCAGATATGCAATTG+TGG | - | chr8_1:61347690-61347709 | Msa1205210:intron | 35.0% | |
| CAAAAGGGGATATGTCTATA+TGG | - | chr8_1:61347848-61347867 | Msa1205210:intron | 35.0% | |
| AATAGCGATATTGGATTTGG+TGG | - | chr8_1:61347925-61347944 | Msa1205210:intron | 35.0% | |
| AAAGATAGAGGGTTGAGATT+TGG | - | chr8_1:61348080-61348099 | Msa1205210:intron | 35.0% | |
| CTTCGAAAAATGGCAATTAG+AGG | + | chr8_1:61348374-61348393 | None:intergenic | 35.0% | |
| AGGAAAAATCACGAGAACAT+TGG | + | chr8_1:61348513-61348532 | None:intergenic | 35.0% | |
| CTTGAAATCATCATCACTTG+TGG | + | chr8_1:61343012-61343031 | None:intergenic | 35.0% | |
| ! | CACAAGTGATGATGATTTCA+AGG | - | chr8_1:61343010-61343029 | Msa1205210:intron | 35.0% |
| ATGATTTCAAGGAACTCGTA+AGG | - | chr8_1:61343021-61343040 | Msa1205210:intron | 35.0% | |
| TGATTTCAAGGAACTCGTAA+GGG | - | chr8_1:61343022-61343041 | Msa1205210:intron | 35.0% | |
| GATGAAAATCGTGTTGAGTT+AGG | - | chr8_1:61343065-61343084 | Msa1205210:intron | 35.0% | |
| !! | CTGCTTCTAGAATAAAGAAG+GGG | + | chr8_1:61348799-61348818 | None:intergenic | 35.0% |
| !! | ATTTGTTTTCTCTAGTCACG+GGG | - | chr8_1:61349209-61349228 | Msa1205210:CDS | 35.0% |
| ACCATTAAGGTTCCTGGTAA+AGG | - | chr8_1:61342854-61342873 | Msa1205210:intron | 40.0% | |
| ACCTTTACCAGGAACCTTAA+TGG | + | chr8_1:61342858-61342877 | None:intergenic | 40.0% | |
| AAGGTTCCTGGTAAAGGTAA+AGG | - | chr8_1:61342860-61342879 | Msa1205210:intron | 40.0% | |
| ACATGTCCTTTACCTTTACC+AGG | + | chr8_1:61342869-61342888 | None:intergenic | 40.0% | |
| GTAAAGGACATGTACGTCAA+TGG | - | chr8_1:61342876-61342895 | Msa1205210:intron | 40.0% | |
| AGGCAAAATCACGAGAACAT+TGG | + | chr8_1:61342908-61342927 | None:intergenic | 40.0% | |
| GGAAAGGAGTAAAATTGCGT+GGG | + | chr8_1:61342957-61342976 | None:intergenic | 40.0% | |
| AGGAAAGGAGTAAAATTGCG+TGG | + | chr8_1:61342958-61342977 | None:intergenic | 40.0% | |
| ! | CGCAATTTTACTCCTTTCCT+AGG | - | chr8_1:61342958-61342977 | Msa1205210:intron | 40.0% |
| !! | AAATCGTGTTGAGTTGGGTA+AGG | - | chr8_1:61343070-61343089 | Msa1205210:intron | 40.0% |
| ! | GCATGTGTTATTCGTAGTAG+AGG | - | chr8_1:61343264-61343283 | Msa1205210:intron | 40.0% |
| ! | TACTCTTGAGAGCATGTTAG+TGG | - | chr8_1:61343529-61343548 | Msa1205210:intron | 40.0% |
| ! | ACTCTTGAGAGCATGTTAGT+GGG | - | chr8_1:61343530-61343549 | Msa1205210:intron | 40.0% |
| ACATACTCCTGTGTCAAAGA+TGG | - | chr8_1:61343571-61343590 | Msa1205210:intron | 40.0% | |
| ! | TTGACTGGACCATCATCTTT+TGG | + | chr8_1:61343721-61343740 | None:intergenic | 40.0% |
| GAGAGAGAGAGTGGAAAATT+TGG | + | chr8_1:61344462-61344481 | None:intergenic | 40.0% | |
| ATGCAGACCTTATGATGAAG+GGG | - | chr8_1:61345066-61345085 | Msa1205210:intron | 40.0% | |
| CTGCTAACCTCAAATTGTGT+TGG | - | chr8_1:61345125-61345144 | Msa1205210:intron | 40.0% | |
| ! | TTTTGGACTGATAGATGGTG+TGG | - | chr8_1:61345321-61345340 | Msa1205210:intron | 40.0% |
| !! | GCTATCAGAGATTTTGAAGG+TGG | + | chr8_1:61345642-61345661 | None:intergenic | 40.0% |
| CAAAATCTCTGATAGCATGG+AGG | - | chr8_1:61345646-61345665 | Msa1205210:intron | 40.0% | |
| GATGAAAAGCTTATGGAGAG+AGG | - | chr8_1:61345693-61345712 | Msa1205210:intron | 40.0% | |
| GGCACATTTGTGATAGAAGA+TGG | - | chr8_1:61345868-61345887 | Msa1205210:intron | 40.0% | |
| ACATAACTTCCTTGATCCGA+GGG | + | chr8_1:61346129-61346148 | None:intergenic | 40.0% | |
| ! | TCTTTGAAAGGCTGTCTCTA+TGG | + | chr8_1:61346326-61346345 | None:intergenic | 40.0% |
| AGACAGCCTTTCAAAGAAGT+TGG | - | chr8_1:61346329-61346348 | Msa1205210:intron | 40.0% | |
| AATCAAGAGCTTCATGCAGT+TGG | + | chr8_1:61346446-61346465 | None:intergenic | 40.0% | |
| ! | GTCTCCCATATTTTCAGAGA+AGG | - | chr8_1:61346481-61346500 | Msa1205210:intron | 40.0% |
| ! | GCTGATTCCTTTGCAAACTT+TGG | - | chr8_1:61346514-61346533 | Msa1205210:intron | 40.0% |
| CCAAGAAAATAATCCCTGCA+AGG | + | chr8_1:61346545-61346564 | None:intergenic | 40.0% | |
| ! | CCTTGCAGGGATTATTTTCT+TGG | - | chr8_1:61346542-61346561 | Msa1205210:intron | 40.0% |
| AGTTAGGCATGCCTAACTAT+AGG | - | chr8_1:61346608-61346627 | Msa1205210:intron | 40.0% | |
| !! | TTGTTTCCTTCTGAGGGTTT+TGG | - | chr8_1:61346632-61346651 | Msa1205210:intron | 40.0% |
| AAGGAGCAGATACAAAAGAG+GGG | + | chr8_1:61346667-61346686 | None:intergenic | 40.0% | |
| GCTCTTTGATGTAACCTCTT+TGG | - | chr8_1:61346712-61346731 | Msa1205210:intron | 40.0% | |
| GAGATTCGTGAACAACAGAT+TGG | + | chr8_1:61347470-61347489 | None:intergenic | 40.0% | |
| CTACGTAGCAACCATTAACA+TGG | - | chr8_1:61347549-61347568 | Msa1205210:intron | 40.0% | |
| GGAATTGGATATGTTGTCCA+TGG | - | chr8_1:61347570-61347589 | Msa1205210:intron | 40.0% | |
| !! | GGTTTTGTGATCCATATGAG+AGG | - | chr8_1:61347870-61347889 | Msa1205210:intron | 40.0% |
| ATTAGAGGGCCCATTATCTA+CGG | + | chr8_1:61348312-61348331 | None:intergenic | 40.0% | |
| ACCATTAAGGTTCCTGGTAA+AGG | - | chr8_1:61342854-61342873 | Msa1205210:intron | 40.0% | |
| ACCTTTACCAGGAACCTTAA+TGG | + | chr8_1:61342858-61342877 | None:intergenic | 40.0% | |
| AAGGTTCCTGGTAAAGGTAA+AGG | - | chr8_1:61342860-61342879 | Msa1205210:intron | 40.0% | |
| ACATGTCCTTTACCTTTACC+AGG | + | chr8_1:61342869-61342888 | None:intergenic | 40.0% | |
| GTAAAGGACATGTACGTCAA+TGG | - | chr8_1:61342876-61342895 | Msa1205210:intron | 40.0% | |
| TATGTAGATCCTGCAACCAT+GGG | - | chr8_1:61348532-61348551 | Msa1205210:intron | 40.0% | |
| CATATTTGCTCTACTGCGAA+TGG | + | chr8_1:61348830-61348849 | None:intergenic | 40.0% | |
| TTCAGATTATAGGTGAAGCG+TGG | - | chr8_1:61349074-61349093 | Msa1205210:intron | 40.0% | |
| TCAGATTATAGGTGAAGCGT+GGG | - | chr8_1:61349075-61349094 | Msa1205210:intron | 40.0% | |
| CAAGCTCATCAGGTACATGA+AGG | - | chr8_1:61342830-61342849 | Msa1205210:intron | 45.0% | |
| !! | GGTACATGAAGGCACCATTA+AGG | - | chr8_1:61342841-61342860 | Msa1205210:intron | 45.0% |
| CATGGTTGCATGGTCTACAT+AGG | + | chr8_1:61342928-61342947 | None:intergenic | 45.0% | |
| CTATGTAGACCATGCAACCA+TGG | - | chr8_1:61342926-61342945 | Msa1205210:intron | 45.0% | |
| AAATTGCGTGGGACATACCA+TGG | + | chr8_1:61342946-61342965 | None:intergenic | 45.0% | |
| AACACTGAAGCTCCTAGGAA+AGG | + | chr8_1:61342973-61342992 | None:intergenic | 45.0% | |
| GAGTTAACACTGAAGCTCCT+AGG | + | chr8_1:61342978-61342997 | None:intergenic | 45.0% | |
| TGGAAGGATTGAAGAAGACG+AGG | - | chr8_1:61343130-61343149 | Msa1205210:intron | 45.0% | |
| ! | CTCTTGAGAGCATGTTAGTG+GGG | - | chr8_1:61343531-61343550 | Msa1205210:intron | 45.0% |
| ! | CACAGGAGTATGTGTTTGCA+AGG | + | chr8_1:61343564-61343583 | None:intergenic | 45.0% |
| GACGAGTTCTATTCAACCCA+AGG | - | chr8_1:61343851-61343870 | Msa1205210:intron | 45.0% | |
| ! | GGGTGAGTTCTTTGGATTAG+TGG | + | chr8_1:61344185-61344204 | None:intergenic | 45.0% |
| !! | GAAAGCTTGTTACAGTGGCA+TGG | - | chr8_1:61345035-61345054 | Msa1205210:intron | 45.0% |
| TGCAGACCTTATGATGAAGG+GGG | - | chr8_1:61345067-61345086 | Msa1205210:intron | 45.0% | |
| TAGGGTAATGTCACCAGTCT+TGG | + | chr8_1:61345544-61345563 | None:intergenic | 45.0% | |
| GACTGGTGACATTACCCTAA+AGG | - | chr8_1:61345545-61345564 | Msa1205210:intron | 45.0% | |
| GAAGTCAGTCATAGAGGAGT+TGG | + | chr8_1:61346063-61346082 | None:intergenic | 45.0% | |
| GATGGTGAAGTCAGTCATAG+AGG | + | chr8_1:61346069-61346088 | None:intergenic | 45.0% | |
| CATAACTTCCTTGATCCGAG+GGG | + | chr8_1:61346128-61346147 | None:intergenic | 45.0% | |
| CACATAACTTCCTTGATCCG+AGG | + | chr8_1:61346130-61346149 | None:intergenic | 45.0% | |
| CTCGGATCAAGGAAGTTATG+TGG | - | chr8_1:61346128-61346147 | Msa1205210:intron | 45.0% | |
| GGTATCCTCCTCTCAATAAC+TGG | - | chr8_1:61346149-61346168 | Msa1205210:intron | 45.0% | |
| TCATCAGTGTCTTCTGCTTG+TGG | - | chr8_1:61346199-61346218 | Msa1205210:intron | 45.0% | |
| ! | GCATTTTATGCTGAGCTGCT+TGG | - | chr8_1:61346289-61346308 | Msa1205210:intron | 45.0% |
| CATCTGTTCCTTAACTGCCA+TGG | + | chr8_1:61346421-61346440 | None:intergenic | 45.0% | |
| CATGGCAGTTAAGGAACAGA+TGG | - | chr8_1:61346419-61346438 | Msa1205210:intron | 45.0% | |
| GGTCAAGCCAAAGTTTGCAA+AGG | + | chr8_1:61346524-61346543 | None:intergenic | 45.0% | |
| !! | AAACTTTGGCTTGACCTTGC+AGG | - | chr8_1:61346528-61346547 | Msa1205210:intron | 45.0% |
| !! | AACTTTGGCTTGACCTTGCA+GGG | - | chr8_1:61346529-61346548 | Msa1205210:intron | 45.0% |
| CTATAGCCAAAACCCTCAGA+AGG | + | chr8_1:61346641-61346660 | None:intergenic | 45.0% | |
| AGGAGCAGATACAAAAGAGG+GGG | + | chr8_1:61346666-61346685 | None:intergenic | 45.0% | |
| !! | TCTTTTAGGAATGGGGGAAG+AGG | + | chr8_1:61347440-61347459 | None:intergenic | 45.0% |
| TCAACGAATCCGTTAACACC+TGG | - | chr8_1:61348105-61348124 | Msa1205210:intron | 45.0% | |
| AAGAGCAAAGGAAGCAAGCT+CGG | - | chr8_1:61342816-61342835 | Msa1205210:intron | 45.0% | |
| !! | GGTACATGAAGGCACCATTA+AGG | - | chr8_1:61342841-61342860 | Msa1205210:intron | 45.0% |
| CATGGTTGCAGGATCTACAT+AGG | + | chr8_1:61348533-61348552 | None:intergenic | 45.0% | |
| CTATGTAGATCCTGCAACCA+TGG | - | chr8_1:61348531-61348550 | Msa1205210:intron | 45.0% | |
| GGAAAGGAGTAAAGTTGCGT+AGG | + | chr8_1:61348562-61348581 | None:intergenic | 45.0% | |
| CGCAACTTTACTCCTTTCCT+AGG | - | chr8_1:61348563-61348582 | Msa1205210:intron | 45.0% | |
| AACACTGAAGCTCCTAGGAA+AGG | + | chr8_1:61342973-61342992 | None:intergenic | 45.0% | |
| GAGTTAACACTGAAGCTCCT+AGG | + | chr8_1:61342978-61342997 | None:intergenic | 45.0% | |
| !!! | TTATATTTTTGTTATATTAT+TGG | + | chr8_1:61344787-61344806 | None:intergenic | 5.0% |
| !! | AAATATAAATATATTCATTT+AGG | - | chr8_1:61344881-61344900 | Msa1205210:intron | 5.0% |
| GCAAAGGAAGCAAGCTCATC+AGG | - | chr8_1:61342820-61342839 | Msa1205210:intron | 50.0% | |
| !! | GAAGGCACCATTAAGGTTCC+TGG | - | chr8_1:61342848-61342867 | Msa1205210:intron | 50.0% |
| TGGGACATACCATGGTTGCA+TGG | + | chr8_1:61342938-61342957 | None:intergenic | 50.0% | |
| GTTCTTCGGAGTCACAGTGT+TGG | - | chr8_1:61343104-61343123 | Msa1205210:intron | 50.0% | |
| !! | GTCACAGTGTTGGCATTGGA+AGG | - | chr8_1:61343114-61343133 | Msa1205210:intron | 50.0% |
| GAATGGCAGGGTGAGTTCTT+TGG | + | chr8_1:61344193-61344212 | None:intergenic | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+TGG | + | chr8_1:61344471-61344490 | None:intergenic | 50.0% | |
| !! | GACAGCTAGCTCTAATACGC+CGG | + | chr8_1:61344566-61344585 | None:intergenic | 50.0% |
| CCTAGACCCCCTTCATCATA+AGG | + | chr8_1:61345076-61345095 | None:intergenic | 50.0% | |
| CCTTATGATGAAGGGGGTCT+AGG | - | chr8_1:61345073-61345092 | Msa1205210:intron | 50.0% | |
| TCAACAGTCTGTCTGGGAGA+AGG | + | chr8_1:61345468-61345487 | None:intergenic | 50.0% | |
| ATGTGGTGTGAGTCCAAGAC+TGG | - | chr8_1:61345528-61345547 | Msa1205210:intron | 50.0% | |
| AGAGGAGTTGGAGGTAGCTT+TGG | + | chr8_1:61346051-61346070 | None:intergenic | 50.0% | |
| GTCAGTCATAGAGGAGTTGG+AGG | + | chr8_1:61346060-61346079 | None:intergenic | 50.0% | |
| !! | TGAGCTGCTTGGTGCTATGA+GGG | - | chr8_1:61346300-61346319 | Msa1205210:intron | 50.0% |
| GGAGCAGATACAAAAGAGGG+GGG | + | chr8_1:61346665-61346684 | None:intergenic | 50.0% | |
| TCAACGAATCCGTTGACACC+TGG | + | chr8_1:61347304-61347323 | None:intergenic | 50.0% | |
| CCGTTGACACCAGGTGTTAA+CGG | + | chr8_1:61348117-61348136 | None:intergenic | 50.0% | |
| ! | CCGTTAACACCTGGTGTCAA+CGG | - | chr8_1:61348114-61348133 | Msa1205210:intron | 50.0% |
| CAAGCTCGGTAGGTACATGA+AGG | - | chr8_1:61348435-61348454 | Msa1205210:intron | 50.0% | |
| !! | GAAGGCACCATTAAGGTTCC+TGG | - | chr8_1:61342848-61342867 | Msa1205210:intron | 50.0% |
| AAGTTGCGTAGGACATCCCA+TGG | + | chr8_1:61348551-61348570 | None:intergenic | 50.0% | |
| !! | CGAAAGCGATGAAAGTGCCT+CGG | - | chr8_1:61348695-61348714 | Msa1205210:intron | 50.0% |
| ! | GTCGCAGTGTTGGAATTGGA+AGG | - | chr8_1:61348719-61348738 | Msa1205210:intron | 50.0% |
| !! | CGGAGTCACAGTGTTGGCAT+TGG | - | chr8_1:61343110-61343129 | Msa1205210:intron | 55.0% |
| !! | CTGAGCTGCTTGGTGCTATG+AGG | - | chr8_1:61346299-61346318 | Msa1205210:intron | 55.0% |
| AGTCAGGATCCGTTGACACC+AGG | - | chr8_1:61347283-61347302 | Msa1205210:intron | 55.0% | |
| ! | CCGTTGACACCTGGTGTCAA+CGG | + | chr8_1:61347295-61347314 | None:intergenic | 55.0% |
| CCGTTGACACCAGGTGTCAA+CGG | - | chr8_1:61347292-61347311 | Msa1205210:intron | 55.0% | |
| ACTGAAGGAGAGATCGCGTG+AGG | + | chr8_1:61347387-61347406 | None:intergenic | 55.0% | |
| AGTCAGGATCCGTTGACACC+AGG | + | chr8_1:61347283-61347302 | None:intergenic | 55.0% | |
| GCAAAGGAAGCAAGCTCGGT+AGG | - | chr8_1:61348425-61348444 | Msa1205210:intron | 55.0% | |
| GTAGGACATCCCATGGTTGC+AGG | + | chr8_1:61348544-61348563 | None:intergenic | 55.0% | |
| TCGTAAGGGCTGCGTCACTT+AGG | - | chr8_1:61348641-61348660 | Msa1205210:intron | 55.0% | |
| ATTCCAACACTGCGACTCCG+AGG | + | chr8_1:61348715-61348734 | None:intergenic | 55.0% | |
| ! | CGGAGTCGCAGTGTTGGAAT+TGG | - | chr8_1:61348715-61348734 | Msa1205210:intron | 55.0% |
| TCGTAAGGGCTGCGTCGCTT+AGG | - | chr8_1:61343036-61343055 | Msa1205210:intron | 60.0% | |
| ATACACCCCCTAGAGCCCCT+CGG | - | chr8_1:61346110-61346129 | Msa1205210:intron | 60.0% | |
| !! | TTGATCCGAGGGGCTCTAGG+GGG | + | chr8_1:61346118-61346137 | None:intergenic | 60.0% |
| ! | CTTGATCCGAGGGGCTCTAG+GGG | + | chr8_1:61346119-61346138 | None:intergenic | 60.0% |
| CCTTGATCCGAGGGGCTCTA+GGG | + | chr8_1:61346120-61346139 | None:intergenic | 60.0% | |
| TCCTTGATCCGAGGGGCTCT+AGG | + | chr8_1:61346121-61346140 | None:intergenic | 60.0% | |
| CCCTAGAGCCCCTCGGATCA+AGG | - | chr8_1:61346117-61346136 | Msa1205210:intron | 65.0% | |
| GTGCCTCGGAGTCGCAGTGT+TGG | - | chr8_1:61348709-61348728 | Msa1205210:intron | 65.0% | |
| AAAGGCTGGCACGCGAGCGC+CGG | + | chr8_1:61344618-61344637 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 61342801 | 61349237 | 61342801 | ID=Msa1205210;Name=Msa1205210 |
| chr8_1 | mRNA | 61342801 | 61349237 | 61342801 | ID=Msa1205210-mRNA-1;Parent=Msa1205210;Name=Msa1205210-mRNA-1;_AED=0.25;_eAED=0.27;_QI=0|0|0|1|0|0|4|0|180 |
| chr8_1 | exon | 61349152 | 61349237 | 61349152 | ID=Msa1205210-mRNA-1:exon:19922;Parent=Msa1205210-mRNA-1 |
| chr8_1 | exon | 61348829 | 61349049 | 61348829 | ID=Msa1205210-mRNA-1:exon:19921;Parent=Msa1205210-mRNA-1 |
| chr8_1 | exon | 61343278 | 61343499 | 61343278 | ID=Msa1205210-mRNA-1:exon:19920;Parent=Msa1205210-mRNA-1 |
| chr8_1 | exon | 61342801 | 61342814 | 61342801 | ID=Msa1205210-mRNA-1:exon:19919;Parent=Msa1205210-mRNA-1 |
| chr8_1 | CDS | 61349152 | 61349237 | 61349152 | ID=Msa1205210-mRNA-1:cds;Parent=Msa1205210-mRNA-1 |
| chr8_1 | CDS | 61348829 | 61349049 | 61348829 | ID=Msa1205210-mRNA-1:cds;Parent=Msa1205210-mRNA-1 |
| chr8_1 | CDS | 61343278 | 61343499 | 61343278 | ID=Msa1205210-mRNA-1:cds;Parent=Msa1205210-mRNA-1 |
| chr8_1 | CDS | 61342801 | 61342814 | 61342801 | ID=Msa1205210-mRNA-1:cds;Parent=Msa1205210-mRNA-1 |
| Gene Sequence |
| Protein sequence |
