Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1205740 | XP_013457536.1 | 98.819 | 254 | 3 | 0 | 1 | 254 | 1 | 254 | 0.0 | 521 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1205740 | sp|Q850K7|EXLB1_ORYSJ | 63.710 | 248 | 83 | 3 | 9 | 253 | 11 | 254 | 1.48e-114 | 332 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1205740 | A0A072UPE6 | 98.819 | 254 | 3 | 0 | 1 | 254 | 1 | 254 | 0.0 | 521 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1205740 | Msa1206080 | 0.923245 | 3.423079e-89 | -8.615850e-47 |
| Msa1205740 | Msa1256960 | 0.925194 | 2.550841e-90 | -8.615850e-47 |
| Msa1205740 | Msa1329500 | 0.906114 | 2.097131e-80 | -8.615850e-47 |
| Msa1205740 | Msa1329530 | 0.901680 | 2.097637e-78 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1205740 | MtrunA17_Chr4g0055061 | 98.819 | 254 | 3 | 0 | 1 | 254 | 1 | 254 | 0.0 | 521 |
| Msa1205740 | MtrunA17_Chr4g0055561 | 40.637 | 251 | 141 | 2 | 3 | 253 | 9 | 251 | 3.85e-66 | 206 |
| Msa1205740 | MtrunA17_Chr4g0055601 | 40.800 | 250 | 139 | 3 | 3 | 251 | 9 | 250 | 4.63e-66 | 205 |
| Msa1205740 | MtrunA17_Chr5g0399811 | 41.393 | 244 | 140 | 2 | 10 | 253 | 12 | 252 | 5.19e-63 | 197 |
| Msa1205740 | MtrunA17_Chr4g0038741 | 41.453 | 234 | 130 | 5 | 23 | 254 | 17 | 245 | 1.45e-61 | 194 |
| Msa1205740 | MtrunA17_Chr7g0231211 | 36.123 | 227 | 127 | 7 | 29 | 246 | 47 | 264 | 3.09e-37 | 132 |
| Msa1205740 | MtrunA17_Chr7g0231221 | 36.607 | 224 | 128 | 9 | 34 | 248 | 53 | 271 | 1.24e-31 | 117 |
| Msa1205740 | MtrunA17_Chr4g0012801 | 34.468 | 235 | 131 | 10 | 27 | 250 | 40 | 262 | 4.59e-31 | 115 |
| Msa1205740 | MtrunA17_Chr2g0324221 | 33.032 | 221 | 136 | 7 | 34 | 248 | 40 | 254 | 4.44e-30 | 113 |
| Msa1205740 | MtrunA17_Chr2g0324201 | 32.579 | 221 | 137 | 7 | 34 | 248 | 38 | 252 | 6.97e-30 | 112 |
| Msa1205740 | MtrunA17_Chr4g0021641 | 31.222 | 221 | 140 | 7 | 34 | 248 | 46 | 260 | 3.88e-26 | 102 |
| Msa1205740 | MtrunA17_Chr7g0217661 | 29.249 | 253 | 152 | 12 | 3 | 246 | 1 | 235 | 6.74e-19 | 82.8 |
| Msa1205740 | MtrunA17_Chr3g0092071 | 28.512 | 242 | 138 | 11 | 27 | 251 | 23 | 246 | 2.78e-16 | 75.9 |
| Msa1205740 | MtrunA17_Chr1g0193631 | 29.487 | 234 | 143 | 10 | 31 | 251 | 32 | 256 | 2.34e-15 | 73.6 |
| Msa1205740 | MtrunA17_Chr7g0271001 | 26.792 | 265 | 168 | 11 | 1 | 251 | 1 | 253 | 1.38e-14 | 71.2 |
| Msa1205740 | MtrunA17_Chr5g0398271 | 25.670 | 261 | 168 | 10 | 7 | 250 | 9 | 260 | 1.99e-14 | 70.9 |
| Msa1205740 | MtrunA17_Chr4g0042521 | 28.216 | 241 | 138 | 11 | 29 | 252 | 25 | 247 | 2.08e-14 | 70.9 |
| Msa1205740 | MtrunA17_Chr4g0055581 | 38.043 | 92 | 56 | 1 | 95 | 185 | 13 | 104 | 2.83e-14 | 67.0 |
| Msa1205740 | MtrunA17_Chr5g0417701 | 28.692 | 237 | 131 | 11 | 29 | 246 | 25 | 242 | 1.54e-13 | 68.2 |
| Msa1205740 | MtrunA17_Chr4g0057091 | 26.592 | 267 | 160 | 10 | 1 | 250 | 12 | 259 | 2.86e-13 | 67.8 |
| Msa1205740 | MtrunA17_Chr3g0128791 | 27.273 | 264 | 154 | 13 | 3 | 249 | 9 | 251 | 3.28e-13 | 67.4 |
| Msa1205740 | MtrunA17_Chr7g0218741 | 25.758 | 264 | 163 | 12 | 1 | 247 | 1 | 248 | 5.41e-13 | 67.0 |
| Msa1205740 | MtrunA17_Chr3g0128801 | 27.586 | 232 | 134 | 11 | 32 | 246 | 34 | 248 | 2.92e-12 | 64.7 |
| Msa1205740 | MtrunA17_Chr7g0218751 | 26.136 | 264 | 160 | 12 | 1 | 247 | 1 | 246 | 1.56e-11 | 62.8 |
| Msa1205740 | MtrunA17_Chr4g0031621 | 25.806 | 155 | 104 | 4 | 3 | 146 | 5 | 159 | 1.94e-11 | 62.4 |
| Msa1205740 | MtrunA17_Chr6g0453341 | 27.753 | 227 | 138 | 10 | 29 | 246 | 38 | 247 | 2.34e-11 | 62.4 |
| Msa1205740 | MtrunA17_Chr3g0107291 | 24.151 | 265 | 163 | 13 | 1 | 247 | 12 | 256 | 3.21e-11 | 62.0 |
| Msa1205740 | MtrunA17_Chr3g0107311 | 23.774 | 265 | 164 | 13 | 1 | 247 | 6 | 250 | 3.90e-11 | 61.6 |
| Msa1205740 | MtrunA17_Chr8g0360721 | 26.267 | 217 | 128 | 10 | 48 | 248 | 17 | 217 | 6.58e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1205740 | AT4G17030.1 | 42.915 | 247 | 133 | 4 | 5 | 250 | 8 | 247 | 2.22e-59 | 189 |
| Msa1205740 | AT4G38400.1 | 42.647 | 204 | 112 | 4 | 52 | 252 | 47 | 248 | 9.64e-54 | 174 |
| Msa1205740 | AT3G45970.2 | 40.758 | 211 | 115 | 6 | 48 | 252 | 15 | 221 | 7.82e-52 | 169 |
| Msa1205740 | AT3G45970.1 | 36.653 | 251 | 145 | 8 | 8 | 252 | 6 | 248 | 5.12e-49 | 162 |
| Msa1205740 | AT3G45960.2 | 36.765 | 204 | 124 | 4 | 52 | 252 | 46 | 247 | 8.87e-47 | 157 |
| Msa1205740 | AT3G45960.1 | 38.144 | 194 | 115 | 4 | 62 | 252 | 8 | 199 | 1.48e-46 | 154 |
| Msa1205740 | AT1G65680.1 | 34.818 | 247 | 139 | 10 | 16 | 250 | 35 | 271 | 4.04e-31 | 116 |
| Msa1205740 | AT1G65681.1 | 31.308 | 214 | 134 | 6 | 44 | 250 | 13 | 220 | 1.71e-29 | 110 |
| Msa1205740 | AT3G60570.1 | 27.547 | 265 | 162 | 12 | 2 | 250 | 5 | 255 | 2.51e-27 | 106 |
| Msa1205740 | AT2G45110.1 | 30.682 | 264 | 158 | 10 | 1 | 248 | 1 | 255 | 9.82e-27 | 104 |
| Msa1205740 | AT2G20750.1 | 30.043 | 233 | 141 | 8 | 29 | 248 | 40 | 263 | 1.59e-25 | 101 |
| Msa1205740 | AT4G28250.1 | 28.958 | 259 | 165 | 11 | 1 | 248 | 6 | 256 | 1.18e-24 | 99.4 |
| Msa1205740 | AT3G60570.2 | 28.972 | 214 | 130 | 10 | 48 | 250 | 5 | 207 | 9.84e-24 | 95.9 |
| Msa1205740 | AT2G20750.2 | 34.146 | 164 | 90 | 6 | 34 | 185 | 45 | 202 | 4.44e-22 | 91.3 |
| Msa1205740 | AT4G28250.2 | 28.185 | 259 | 161 | 12 | 1 | 248 | 6 | 250 | 2.95e-20 | 87.4 |
| Msa1205740 | AT1G69530.2 | 27.820 | 266 | 159 | 9 | 3 | 252 | 1 | 249 | 1.65e-17 | 79.7 |
| Msa1205740 | AT1G69530.1 | 27.820 | 266 | 159 | 9 | 3 | 252 | 1 | 249 | 1.65e-17 | 79.7 |
| Msa1205740 | AT1G69530.3 | 27.692 | 260 | 156 | 8 | 3 | 246 | 1 | 244 | 2.56e-17 | 79.7 |
| Msa1205740 | AT4G28250.3 | 29.070 | 172 | 109 | 5 | 34 | 200 | 41 | 204 | 2.68e-17 | 78.2 |
| Msa1205740 | AT4G28250.4 | 28.283 | 198 | 125 | 7 | 1 | 190 | 6 | 194 | 7.24e-17 | 77.0 |
| Msa1205740 | AT5G39290.1 | 29.289 | 239 | 133 | 12 | 29 | 250 | 58 | 277 | 7.58e-17 | 78.6 |
| Msa1205740 | AT4G01630.1 | 25.954 | 262 | 167 | 10 | 3 | 250 | 5 | 253 | 1.41e-16 | 77.4 |
| Msa1205740 | AT3G29030.1 | 27.820 | 266 | 150 | 11 | 9 | 249 | 3 | 251 | 4.13e-16 | 75.9 |
| Msa1205740 | AT5G56320.1 | 30.213 | 235 | 130 | 11 | 29 | 246 | 29 | 246 | 8.41e-16 | 75.1 |
| Msa1205740 | AT5G56320.2 | 30.213 | 235 | 130 | 11 | 29 | 246 | 29 | 246 | 8.41e-16 | 75.1 |
| Msa1205740 | AT5G39270.1 | 28.270 | 237 | 138 | 10 | 29 | 250 | 58 | 277 | 9.90e-16 | 75.1 |
| Msa1205740 | AT5G56320.3 | 30.213 | 235 | 130 | 11 | 29 | 246 | 29 | 246 | 1.36e-15 | 75.1 |
| Msa1205740 | AT2G03090.1 | 27.652 | 264 | 156 | 11 | 1 | 246 | 1 | 247 | 3.13e-15 | 73.6 |
| Msa1205740 | AT2G40610.1 | 28.958 | 259 | 147 | 12 | 9 | 249 | 12 | 251 | 4.01e-15 | 73.2 |
| Msa1205740 | AT5G05290.1 | 25.573 | 262 | 164 | 8 | 4 | 249 | 7 | 253 | 4.60e-15 | 73.2 |
| Msa1205740 | AT1G69530.4 | 30.625 | 160 | 87 | 4 | 3 | 146 | 1 | 152 | 4.80e-15 | 72.4 |
| Msa1205740 | AT1G69530.5 | 30.625 | 160 | 87 | 4 | 3 | 146 | 1 | 152 | 4.96e-15 | 72.8 |
| Msa1205740 | AT1G26770.2 | 27.426 | 237 | 140 | 8 | 29 | 249 | 36 | 256 | 1.87e-14 | 71.2 |
| Msa1205740 | AT1G26770.1 | 27.426 | 237 | 140 | 8 | 29 | 249 | 26 | 246 | 2.26e-14 | 70.9 |
| Msa1205740 | AT5G39280.1 | 27.660 | 235 | 136 | 11 | 32 | 250 | 57 | 273 | 3.85e-13 | 67.8 |
| Msa1205740 | AT1G12560.1 | 28.085 | 235 | 134 | 11 | 32 | 248 | 40 | 257 | 1.57e-12 | 66.2 |
| Msa1205740 | AT5G39300.1 | 26.809 | 235 | 138 | 11 | 32 | 250 | 58 | 274 | 2.49e-12 | 65.5 |
| Msa1205740 | AT1G20190.1 | 27.586 | 232 | 145 | 10 | 33 | 251 | 30 | 251 | 2.96e-11 | 62.4 |
| Msa1205740 | AT5G39260.1 | 27.757 | 263 | 151 | 14 | 7 | 247 | 12 | 257 | 3.37e-11 | 62.4 |
| Msa1205740 | AT5G39310.1 | 26.724 | 232 | 139 | 10 | 34 | 250 | 95 | 310 | 7.66e-11 | 61.6 |
| Msa1205740 | AT1G62980.1 | 26.316 | 266 | 158 | 10 | 3 | 248 | 5 | 252 | 8.47e-11 | 61.2 |
Find 72 sgRNAs with CRISPR-Local
Find 228 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACATGAAATTAACTTAAAT+TGG | 0.102970 | 8_1:+62206708 | None:intergenic |
| TTATTTCTTTCTTTCATAAA+AGG | 0.152556 | 8_1:+62206783 | None:intergenic |
| TCCTTTGGTGCTACTATTAA+TGG | 0.182330 | 8_1:-62208206 | Msa1205740:CDS |
| CGAGTGGACCTCTGACTTTA+AGG | 0.275810 | 8_1:-62206960 | Msa1205740:CDS |
| TGGCTGTGGCGCTTGTTTCC+AGG | 0.297954 | 8_1:-62208141 | Msa1205740:intron |
| ATAAAATAAGTAATAGAATA+AGG | 0.322368 | 8_1:-62206681 | Msa1205740:three_prime_UTR |
| TCAGCTGGTGCATGTGGATT+TGG | 0.335177 | 8_1:-62208230 | Msa1205740:intron |
| TTAATAACATACCAGAAAAC+TGG | 0.365399 | 8_1:-62206891 | Msa1205740:CDS |
| GCATGTGGATTTGGTTCCTT+TGG | 0.368760 | 8_1:-62208221 | Msa1205740:CDS |
| CAGCAGCAATCCTCATTACT+TGG | 0.374855 | 8_1:-62207458 | Msa1205740:CDS |
| TCATTGATCACAAGCATGTT+AGG | 0.397769 | 8_1:-62206738 | Msa1205740:three_prime_UTR |
| GCCACTTCTCTATTAGCTCT+TGG | 0.398126 | 8_1:-62207811 | Msa1205740:CDS |
| TATTTCTTTCTTTCATAAAA+GGG | 0.408828 | 8_1:+62206784 | None:intergenic |
| TAATAGAATAAGGTAGAAAT+CGG | 0.411111 | 8_1:-62206671 | Msa1205740:three_prime_UTR |
| ACATGAAATTAACTTAAATT+GGG | 0.426524 | 8_1:+62206709 | None:intergenic |
| ATCGGGATCATGGCGCAGTC+TGG | 0.433963 | 8_1:-62206999 | Msa1205740:CDS |
| TTGTCTGCAAGTTACTGAAT+CGG | 0.443111 | 8_1:-62207017 | Msa1205740:CDS |
| ACCAACAGTGTTTATTGCTC+AGG | 0.451315 | 8_1:-62207937 | Msa1205740:CDS |
| GAGTGCCATGTAGGATAGAT+TGG | 0.451929 | 8_1:+62208474 | None:intergenic |
| AGTTTGGTTTGGTAGAGATA+AGG | 0.463619 | 8_1:-62206622 | Msa1205740:three_prime_UTR |
| TGTCTGCAAGTTACTGAATC+GGG | 0.467993 | 8_1:-62207016 | Msa1205740:CDS |
| ATGTTGTTTAGTACTGAAGA+TGG | 0.475387 | 8_1:-62206937 | Msa1205740:CDS |
| TTGGTGCTACTATTAATGGT+GGG | 0.486435 | 8_1:-62208202 | Msa1205740:CDS |
| TACCCAAACTCTGAAGAAAA+CGG | 0.503927 | 8_1:-62208352 | Msa1205740:CDS |
| TATCGAGATGGAGTTGGCTG+TGG | 0.504204 | 8_1:-62208155 | Msa1205740:CDS |
| ATACCAGAAAACTGGAAGGC+TGG | 0.508235 | 8_1:-62206883 | Msa1205740:CDS |
| TATTAATGGTGGGGATGTAT+CGG | 0.511398 | 8_1:-62208192 | Msa1205740:CDS |
| CTGAAGATGGAGAAGATACA+TGG | 0.511542 | 8_1:-62206924 | Msa1205740:CDS |
| ATCACAAGCATGTTAGGTGC+AGG | 0.523556 | 8_1:-62206732 | Msa1205740:three_prime_UTR |
| TTTGGTGCTACTATTAATGG+TGG | 0.523991 | 8_1:-62208203 | Msa1205740:CDS |
| TCTTATGGTTTCAACAAGGA+AGG | 0.526309 | 8_1:-62207429 | Msa1205740:CDS |
| GCTCTGAGCCATCCCACTGA+AGG | 0.529367 | 8_1:+62207843 | None:intergenic |
| AAGTTACTGAATCGGGATCA+TGG | 0.530799 | 8_1:-62207009 | Msa1205740:CDS |
| AGTCTTTATCGAGATGGAGT+TGG | 0.533818 | 8_1:-62208161 | Msa1205740:CDS |
| AGAATAAGGTAGAAATCGGA+TGG | 0.534776 | 8_1:-62206667 | Msa1205740:three_prime_UTR |
| CCGTGCATGAAGTATCTGCT+AGG | 0.547466 | 8_1:+62208404 | None:intergenic |
| CAAAAGAGAGAGTGCCATGT+AGG | 0.547916 | 8_1:+62208465 | None:intergenic |
| CAATGATATGATAAACTCAC+AGG | 0.562125 | 8_1:+62206755 | None:intergenic |
| TTCAATTCAGCTGGTGCATG+TGG | 0.563025 | 8_1:-62208236 | Msa1205740:intron |
| GCATCTAGTCTTTATCGAGA+TGG | 0.564142 | 8_1:-62208167 | Msa1205740:CDS |
| AAGACAAAAGCCAAGTAATG+AGG | 0.564537 | 8_1:+62207448 | None:intergenic |
| AGTGTTTATTGCTCAGGCAA+CGG | 0.564581 | 8_1:-62207931 | Msa1205740:CDS |
| CCATCCCACTGAAGGCTCGT+TGG | 0.571650 | 8_1:+62207851 | None:intergenic |
| CTTAGCCAACGAGCCTTCAG+TGG | 0.574950 | 8_1:-62207856 | Msa1205740:CDS |
| TTGCTCAGGCAACGGTGTCA+CGG | 0.576990 | 8_1:-62207923 | Msa1205740:CDS |
| ACCAAGAGCTAATAGAGAAG+TGG | 0.578632 | 8_1:+62207810 | None:intergenic |
| CAGTGGGATGGCTCAGAGCA+AGG | 0.580727 | 8_1:-62207839 | Msa1205740:CDS |
| TATGGTTTCAACAAGGAAGG+AGG | 0.586212 | 8_1:-62207426 | Msa1205740:CDS |
| CAGAGGTCCACTCGGTGGAG+AGG | 0.586885 | 8_1:+62206969 | None:intergenic |
| CGTGCATGAAGTATCTGCTA+GGG | 0.588324 | 8_1:+62208405 | None:intergenic |
| TAGGGTTTGCATGAAAAGAA+AGG | 0.589727 | 8_1:+62208423 | None:intergenic |
| TGGTGCTACTATTAATGGTG+GGG | 0.595103 | 8_1:-62208201 | Msa1205740:CDS |
| GCTGGAGACACGTATGACTC+AGG | 0.595961 | 8_1:-62206865 | Msa1205740:CDS |
| ACCATTAATAGTAGCACCAA+AGG | 0.596692 | 8_1:+62208205 | None:intergenic |
| AAAGCAGTCAGAACTCAGAA+TGG | 0.603710 | 8_1:+62208499 | None:intergenic |
| ATGGTTTCAACAAGGAAGGA+GGG | 0.609790 | 8_1:-62207425 | Msa1205740:CDS |
| CTTAAAGTCAGAGGTCCACT+CGG | 0.610489 | 8_1:+62206961 | None:intergenic |
| GCCTGAGCAATAAACACTGT+TGG | 0.617408 | 8_1:+62207936 | None:intergenic |
| AACAACATCCTTAAAGTCAG+AGG | 0.617433 | 8_1:+62206952 | None:intergenic |
| TTAGCCAACGAGCCTTCAGT+GGG | 0.618388 | 8_1:-62207855 | Msa1205740:CDS |
| CCAACGAGCCTTCAGTGGGA+TGG | 0.622367 | 8_1:-62207851 | Msa1205740:CDS |
| TTTATCCAATCTATCCTACA+TGG | 0.626437 | 8_1:-62208479 | Msa1205740:exon |
| CCTAGCAGATACTTCATGCA+CGG | 0.630897 | 8_1:-62208404 | Msa1205740:CDS |
| TCGTTGGCTAAGAATGAAGT+CGG | 0.641482 | 8_1:+62207867 | None:intergenic |
| GAATAAGGTAGAAATCGGAT+GGG | 0.642880 | 8_1:-62206666 | Msa1205740:three_prime_UTR |
| AACTGCTGTGCAGCTCTGCG+AGG | 0.656781 | 8_1:-62207398 | Msa1205740:intron |
| TAACATACCAGAAAACTGGA+AGG | 0.663849 | 8_1:-62206887 | Msa1205740:CDS |
| TAGTTAATATTGAATACAGA+CGG | 0.665226 | 8_1:-62207786 | Msa1205740:intron |
| GGTTTGCATGAAAAGAAAGG+TGG | 0.670977 | 8_1:+62208426 | None:intergenic |
| ACTTCTACCTCTCCACCGAG+TGG | 0.678558 | 8_1:-62206976 | Msa1205740:CDS |
| AAAGTCAGAGGTCCACTCGG+TGG | 0.693232 | 8_1:+62206964 | None:intergenic |
| TTTGTCTTATGGTTTCAACA+AGG | 0.712343 | 8_1:-62207433 | Msa1205740:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCTTCTAAATTTAATTATTT+GGG | + | chr8_1:62207905-62207924 | None:intergenic | 10.0% |
| !! | ATAAAATAAGTAATAGAATA+AGG | - | chr8_1:62208441-62208460 | Msa1205740:CDS | 10.0% |
| !! | TCTTCTAAATTTAATTATTT+GGG | + | chr8_1:62207905-62207924 | None:intergenic | 10.0% |
| !! | ATAAAATAAGTAATAGAATA+AGG | - | chr8_1:62208441-62208460 | Msa1205740:CDS | 10.0% |
| !!! | TAATTGTAATGTTTTTGTTT+GGG | + | chr8_1:62207631-62207650 | None:intergenic | 15.0% |
| !!! | TTAATTGTAATGTTTTTGTT+TGG | + | chr8_1:62207632-62207651 | None:intergenic | 15.0% |
| !! | CTCTTCTAAATTTAATTATT+TGG | + | chr8_1:62207906-62207925 | None:intergenic | 15.0% |
| !! | TATTTCTTTCTTTCATAAAA+GGG | + | chr8_1:62208341-62208360 | None:intergenic | 15.0% |
| !!! | TTATTTCTTTCTTTCATAAA+AGG | + | chr8_1:62208342-62208361 | None:intergenic | 15.0% |
| !! | ACATGAAATTAACTTAAATT+GGG | + | chr8_1:62208416-62208435 | None:intergenic | 15.0% |
| !! | AACATGAAATTAACTTAAAT+TGG | + | chr8_1:62208417-62208436 | None:intergenic | 15.0% |
| !!! | AGTTATTTTATATGTTAGTT+TGG | - | chr8_1:62208484-62208503 | Msa1205740:five_prime_UTR | 15.0% |
| !!! | TAATTGTAATGTTTTTGTTT+GGG | + | chr8_1:62207631-62207650 | None:intergenic | 15.0% |
| !!! | TTAATTGTAATGTTTTTGTT+TGG | + | chr8_1:62207632-62207651 | None:intergenic | 15.0% |
| !! | CTCTTCTAAATTTAATTATT+TGG | + | chr8_1:62207906-62207925 | None:intergenic | 15.0% |
| !! | TATTTCTTTCTTTCATAAAA+GGG | + | chr8_1:62208341-62208360 | None:intergenic | 15.0% |
| !!! | TTATTTCTTTCTTTCATAAA+AGG | + | chr8_1:62208342-62208361 | None:intergenic | 15.0% |
| !! | ACATGAAATTAACTTAAATT+GGG | + | chr8_1:62208416-62208435 | None:intergenic | 15.0% |
| !! | AACATGAAATTAACTTAAAT+TGG | + | chr8_1:62208417-62208436 | None:intergenic | 15.0% |
| !!! | AGTTATTTTATATGTTAGTT+TGG | - | chr8_1:62208484-62208503 | Msa1205740:five_prime_UTR | 15.0% |
| !!! | ATTTTTCATTATTCTTTGAC+AGG | - | chr8_1:62207154-62207173 | Msa1205740:intron | 20.0% |
| !! | TAGTTAATATTGAATACAGA+CGG | - | chr8_1:62207336-62207355 | Msa1205740:intron | 20.0% |
| !!! | TTCGAAAGTTTTAGTTTATT+TGG | + | chr8_1:62207802-62207821 | None:intergenic | 20.0% |
| !! | ATAAACTAAAACTTTCGAAT+AGG | - | chr8_1:62207803-62207822 | Msa1205740:CDS | 20.0% |
| !! | TAATAGAATAAGGTAGAAAT+CGG | - | chr8_1:62208451-62208470 | Msa1205740:CDS | 20.0% |
| !!! | TTTTATATGTTAGTTTGGTT+TGG | - | chr8_1:62208489-62208508 | Msa1205740:five_prime_UTR | 20.0% |
| !!! | ATTTTTCATTATTCTTTGAC+AGG | - | chr8_1:62207154-62207173 | Msa1205740:intron | 20.0% |
| !! | TAGTTAATATTGAATACAGA+CGG | - | chr8_1:62207336-62207355 | Msa1205740:intron | 20.0% |
| !!! | TTCGAAAGTTTTAGTTTATT+TGG | + | chr8_1:62207802-62207821 | None:intergenic | 20.0% |
| !! | ATAAACTAAAACTTTCGAAT+AGG | - | chr8_1:62207803-62207822 | Msa1205740:CDS | 20.0% |
| !! | TAATAGAATAAGGTAGAAAT+CGG | - | chr8_1:62208451-62208470 | Msa1205740:CDS | 20.0% |
| !!! | TTTTATATGTTAGTTTGGTT+TGG | - | chr8_1:62208489-62208508 | Msa1205740:five_prime_UTR | 20.0% |
| ! | AGTTTATTTGTGAATGTCAA+AGG | + | chr8_1:62207084-62207103 | None:intergenic | 25.0% |
| ! | AAAATTGATGCATGGAAAAA+AGG | + | chr8_1:62207541-62207560 | None:intergenic | 25.0% |
| ! | AAACGTAAAAAATTGATGCA+TGG | + | chr8_1:62207549-62207568 | None:intergenic | 25.0% |
| ! | AAACTTTCGAATAGGTTATT+TGG | - | chr8_1:62207811-62207830 | Msa1205740:CDS | 25.0% |
| !!! | TTAGTTTCAAGTTTCAACAT+AGG | + | chr8_1:62207872-62207891 | None:intergenic | 25.0% |
| !!! | TTTTCTGGTATGTTATTAAC+AGG | + | chr8_1:62208230-62208249 | None:intergenic | 25.0% |
| ! | TTAATAACATACCAGAAAAC+TGG | - | chr8_1:62208231-62208250 | Msa1205740:intron | 25.0% |
| ! | AGTTTATTTGTGAATGTCAA+AGG | + | chr8_1:62207084-62207103 | None:intergenic | 25.0% |
| ! | AAAATTGATGCATGGAAAAA+AGG | + | chr8_1:62207541-62207560 | None:intergenic | 25.0% |
| ! | AAACGTAAAAAATTGATGCA+TGG | + | chr8_1:62207549-62207568 | None:intergenic | 25.0% |
| ! | AAACTTTCGAATAGGTTATT+TGG | - | chr8_1:62207811-62207830 | Msa1205740:CDS | 25.0% |
| !!! | TTAGTTTCAAGTTTCAACAT+AGG | + | chr8_1:62207872-62207891 | None:intergenic | 25.0% |
| !!! | TTTTCTGGTATGTTATTAAC+AGG | + | chr8_1:62208230-62208249 | None:intergenic | 25.0% |
| ! | TTAATAACATACCAGAAAAC+TGG | - | chr8_1:62208231-62208250 | Msa1205740:intron | 25.0% |
| TTTATCCAATCTATCCTACA+TGG | - | chr8_1:62206643-62206662 | Msa1205740:three_prime_UTR | 30.0% | |
| ! | TCTTTTGAATTCAATTCAGC+TGG | - | chr8_1:62206877-62206896 | Msa1205740:CDS | 30.0% |
| AGTTATTGTCGTATGAAAAC+TGG | - | chr8_1:62207418-62207437 | Msa1205740:CDS | 30.0% | |
| !! | ATTACTTGGCTTTTGTCTTA+TGG | - | chr8_1:62207678-62207697 | Msa1205740:intron | 30.0% |
| TTTGTCTTATGGTTTCAACA+AGG | - | chr8_1:62207689-62207708 | Msa1205740:intron | 30.0% | |
| ! | AAGACATTTTTCACATGTAG+TGG | + | chr8_1:62207935-62207954 | None:intergenic | 30.0% |
| TAGAGAAAACTAAGAACGAA+AGG | - | chr8_1:62208018-62208037 | Msa1205740:intron | 30.0% | |
| ! | ATGTTGTTTAGTACTGAAGA+TGG | - | chr8_1:62208185-62208204 | Msa1205740:CDS | 30.0% |
| ! | ATATTTTGCTGCATCTCTAT+TGG | + | chr8_1:62208295-62208314 | None:intergenic | 30.0% |
| CAATGATATGATAAACTCAC+AGG | + | chr8_1:62208370-62208389 | None:intergenic | 30.0% | |
| TTTATCCAATCTATCCTACA+TGG | - | chr8_1:62206643-62206662 | Msa1205740:three_prime_UTR | 30.0% | |
| ! | TCTTTTGAATTCAATTCAGC+TGG | - | chr8_1:62206877-62206896 | Msa1205740:CDS | 30.0% |
| AGTTATTGTCGTATGAAAAC+TGG | - | chr8_1:62207418-62207437 | Msa1205740:CDS | 30.0% | |
| !! | ATTACTTGGCTTTTGTCTTA+TGG | - | chr8_1:62207678-62207697 | Msa1205740:intron | 30.0% |
| TTTGTCTTATGGTTTCAACA+AGG | - | chr8_1:62207689-62207708 | Msa1205740:intron | 30.0% | |
| ! | AAGACATTTTTCACATGTAG+TGG | + | chr8_1:62207935-62207954 | None:intergenic | 30.0% |
| TAGAGAAAACTAAGAACGAA+AGG | - | chr8_1:62208018-62208037 | Msa1205740:intron | 30.0% | |
| ! | ATGTTGTTTAGTACTGAAGA+TGG | - | chr8_1:62208185-62208204 | Msa1205740:CDS | 30.0% |
| ! | ATATTTTGCTGCATCTCTAT+TGG | + | chr8_1:62208295-62208314 | None:intergenic | 30.0% |
| CAATGATATGATAAACTCAC+AGG | + | chr8_1:62208370-62208389 | None:intergenic | 30.0% | |
| TAGGGTTTGCATGAAAAGAA+AGG | + | chr8_1:62206702-62206721 | None:intergenic | 35.0% | |
| ! | TACCCAAACTCTGAAGAAAA+CGG | - | chr8_1:62206770-62206789 | Msa1205740:three_prime_UTR | 35.0% |
| !! | TCCTTTGGTGCTACTATTAA+TGG | - | chr8_1:62206916-62206935 | Msa1205740:CDS | 35.0% |
| ACCATTAATAGTAGCACCAA+AGG | + | chr8_1:62206920-62206939 | None:intergenic | 35.0% | |
| !! | TTTGGTGCTACTATTAATGG+TGG | - | chr8_1:62206919-62206938 | Msa1205740:CDS | 35.0% |
| !! | TTGGTGCTACTATTAATGGT+GGG | - | chr8_1:62206920-62206939 | Msa1205740:CDS | 35.0% |
| ! | TATTAATGGTGGGGATGTAT+CGG | - | chr8_1:62206930-62206949 | Msa1205740:CDS | 35.0% |
| TCATTATTCTTTGACAGGTG+AGG | - | chr8_1:62207159-62207178 | Msa1205740:intron | 35.0% | |
| !!! | ACGGTAGTTTTAACTGATCA+AGG | - | chr8_1:62207218-62207237 | Msa1205740:intron | 35.0% |
| ACTCATTGCAGATGTATCAT+CGG | + | chr8_1:62207470-62207489 | None:intergenic | 35.0% | |
| AAGACAAAAGCCAAGTAATG+AGG | + | chr8_1:62207677-62207696 | None:intergenic | 35.0% | |
| TCTTATGGTTTCAACAAGGA+AGG | - | chr8_1:62207693-62207712 | Msa1205740:intron | 35.0% | |
| TTGTCTGCAAGTTACTGAAT+CGG | - | chr8_1:62208105-62208124 | Msa1205740:intron | 35.0% | |
| AACAACATCCTTAAAGTCAG+AGG | + | chr8_1:62208173-62208192 | None:intergenic | 35.0% | |
| TAACATACCAGAAAACTGGA+AGG | - | chr8_1:62208235-62208254 | Msa1205740:intron | 35.0% | |
| TCATTGATCACAAGCATGTT+AGG | - | chr8_1:62208384-62208403 | Msa1205740:CDS | 35.0% | |
| AGAATAAGGTAGAAATCGGA+TGG | - | chr8_1:62208455-62208474 | Msa1205740:CDS | 35.0% | |
| GAATAAGGTAGAAATCGGAT+GGG | - | chr8_1:62208456-62208475 | Msa1205740:CDS | 35.0% | |
| !! | AGTTTGGTTTGGTAGAGATA+AGG | - | chr8_1:62208500-62208519 | Msa1205740:five_prime_UTR | 35.0% |
| TAGGGTTTGCATGAAAAGAA+AGG | + | chr8_1:62206702-62206721 | None:intergenic | 35.0% | |
| ! | TACCCAAACTCTGAAGAAAA+CGG | - | chr8_1:62206770-62206789 | Msa1205740:three_prime_UTR | 35.0% |
| !! | TCCTTTGGTGCTACTATTAA+TGG | - | chr8_1:62206916-62206935 | Msa1205740:CDS | 35.0% |
| ACCATTAATAGTAGCACCAA+AGG | + | chr8_1:62206920-62206939 | None:intergenic | 35.0% | |
| !! | TTTGGTGCTACTATTAATGG+TGG | - | chr8_1:62206919-62206938 | Msa1205740:CDS | 35.0% |
| !! | TTGGTGCTACTATTAATGGT+GGG | - | chr8_1:62206920-62206939 | Msa1205740:CDS | 35.0% |
| ! | TATTAATGGTGGGGATGTAT+CGG | - | chr8_1:62206930-62206949 | Msa1205740:CDS | 35.0% |
| TCATTATTCTTTGACAGGTG+AGG | - | chr8_1:62207159-62207178 | Msa1205740:intron | 35.0% | |
| !!! | ACGGTAGTTTTAACTGATCA+AGG | - | chr8_1:62207218-62207237 | Msa1205740:intron | 35.0% |
| ACTCATTGCAGATGTATCAT+CGG | + | chr8_1:62207470-62207489 | None:intergenic | 35.0% | |
| AAGACAAAAGCCAAGTAATG+AGG | + | chr8_1:62207677-62207696 | None:intergenic | 35.0% | |
| TCTTATGGTTTCAACAAGGA+AGG | - | chr8_1:62207693-62207712 | Msa1205740:intron | 35.0% | |
| TTGTCTGCAAGTTACTGAAT+CGG | - | chr8_1:62208105-62208124 | Msa1205740:intron | 35.0% | |
| AACAACATCCTTAAAGTCAG+AGG | + | chr8_1:62208173-62208192 | None:intergenic | 35.0% | |
| TAACATACCAGAAAACTGGA+AGG | - | chr8_1:62208235-62208254 | Msa1205740:intron | 35.0% | |
| TCATTGATCACAAGCATGTT+AGG | - | chr8_1:62208384-62208403 | Msa1205740:CDS | 35.0% | |
| AGAATAAGGTAGAAATCGGA+TGG | - | chr8_1:62208455-62208474 | Msa1205740:CDS | 35.0% | |
| GAATAAGGTAGAAATCGGAT+GGG | - | chr8_1:62208456-62208475 | Msa1205740:CDS | 35.0% | |
| !! | AGTTTGGTTTGGTAGAGATA+AGG | - | chr8_1:62208500-62208519 | Msa1205740:five_prime_UTR | 35.0% |
| AAAGCAGTCAGAACTCAGAA+TGG | + | chr8_1:62206626-62206645 | None:intergenic | 40.0% | |
| GGTTTGCATGAAAAGAAAGG+TGG | + | chr8_1:62206699-62206718 | None:intergenic | 40.0% | |
| !!! | TGCCGTTTTCTTCAGAGTTT+GGG | + | chr8_1:62206775-62206794 | None:intergenic | 40.0% |
| !! | TGGTGCTACTATTAATGGTG+GGG | - | chr8_1:62206921-62206940 | Msa1205740:CDS | 40.0% |
| ! | GCATCTAGTCTTTATCGAGA+TGG | - | chr8_1:62206955-62206974 | Msa1205740:CDS | 40.0% |
| AGTCTTTATCGAGATGGAGT+TGG | - | chr8_1:62206961-62206980 | Msa1205740:CDS | 40.0% | |
| TGTATAGATGTGTTGTCACC+TGG | + | chr8_1:62207002-62207021 | None:intergenic | 40.0% | |
| ACCAACAGTGTTTATTGCTC+AGG | - | chr8_1:62207185-62207204 | Msa1205740:intron | 40.0% | |
| AGTGTTTATTGCTCAGGCAA+CGG | - | chr8_1:62207191-62207210 | Msa1205740:intron | 40.0% | |
| !!! | GTTTTAACTGATCAAGGCTC+AGG | - | chr8_1:62207224-62207243 | Msa1205740:intron | 40.0% |
| ! | TCGTTGGCTAAGAATGAAGT+CGG | + | chr8_1:62207258-62207277 | None:intergenic | 40.0% |
| ACCAAGAGCTAATAGAGAAG+TGG | + | chr8_1:62207315-62207334 | None:intergenic | 40.0% | |
| ! | CTTTTCCCTAGATCTTACCA+TGG | - | chr8_1:62207494-62207513 | Msa1205740:CDS | 40.0% |
| CTTCACCATGGTAAGATCTA+GGG | + | chr8_1:62207502-62207521 | None:intergenic | 40.0% | |
| GATGCATGGAAAAAAGGACA+TGG | + | chr8_1:62207535-62207554 | None:intergenic | 40.0% | |
| TATGGTTTCAACAAGGAAGG+AGG | - | chr8_1:62207696-62207715 | Msa1205740:intron | 40.0% | |
| ATGGTTTCAACAAGGAAGGA+GGG | - | chr8_1:62207697-62207716 | Msa1205740:intron | 40.0% | |
| CACAAACTACAACTTATCGC+AGG | + | chr8_1:62207768-62207787 | None:intergenic | 40.0% | |
| TGTCTGCAAGTTACTGAATC+GGG | - | chr8_1:62208106-62208125 | Msa1205740:intron | 40.0% | |
| AAGTTACTGAATCGGGATCA+TGG | - | chr8_1:62208113-62208132 | Msa1205740:intron | 40.0% | |
| CTGAAGATGGAGAAGATACA+TGG | - | chr8_1:62208198-62208217 | Msa1205740:CDS | 40.0% | |
| AAAGCAGTCAGAACTCAGAA+TGG | + | chr8_1:62206626-62206645 | None:intergenic | 40.0% | |
| GGTTTGCATGAAAAGAAAGG+TGG | + | chr8_1:62206699-62206718 | None:intergenic | 40.0% | |
| !!! | TGCCGTTTTCTTCAGAGTTT+GGG | + | chr8_1:62206775-62206794 | None:intergenic | 40.0% |
| !! | TGGTGCTACTATTAATGGTG+GGG | - | chr8_1:62206921-62206940 | Msa1205740:CDS | 40.0% |
| ! | GCATCTAGTCTTTATCGAGA+TGG | - | chr8_1:62206955-62206974 | Msa1205740:CDS | 40.0% |
| AGTCTTTATCGAGATGGAGT+TGG | - | chr8_1:62206961-62206980 | Msa1205740:CDS | 40.0% | |
| TGTATAGATGTGTTGTCACC+TGG | + | chr8_1:62207002-62207021 | None:intergenic | 40.0% | |
| ACCAACAGTGTTTATTGCTC+AGG | - | chr8_1:62207185-62207204 | Msa1205740:intron | 40.0% | |
| AGTGTTTATTGCTCAGGCAA+CGG | - | chr8_1:62207191-62207210 | Msa1205740:intron | 40.0% | |
| !!! | GTTTTAACTGATCAAGGCTC+AGG | - | chr8_1:62207224-62207243 | Msa1205740:intron | 40.0% |
| ! | TCGTTGGCTAAGAATGAAGT+CGG | + | chr8_1:62207258-62207277 | None:intergenic | 40.0% |
| ACCAAGAGCTAATAGAGAAG+TGG | + | chr8_1:62207315-62207334 | None:intergenic | 40.0% | |
| ! | CTTTTCCCTAGATCTTACCA+TGG | - | chr8_1:62207494-62207513 | Msa1205740:CDS | 40.0% |
| CTTCACCATGGTAAGATCTA+GGG | + | chr8_1:62207502-62207521 | None:intergenic | 40.0% | |
| GATGCATGGAAAAAAGGACA+TGG | + | chr8_1:62207535-62207554 | None:intergenic | 40.0% | |
| TATGGTTTCAACAAGGAAGG+AGG | - | chr8_1:62207696-62207715 | Msa1205740:intron | 40.0% | |
| ATGGTTTCAACAAGGAAGGA+GGG | - | chr8_1:62207697-62207716 | Msa1205740:intron | 40.0% | |
| CACAAACTACAACTTATCGC+AGG | + | chr8_1:62207768-62207787 | None:intergenic | 40.0% | |
| TGTCTGCAAGTTACTGAATC+GGG | - | chr8_1:62208106-62208125 | Msa1205740:intron | 40.0% | |
| AAGTTACTGAATCGGGATCA+TGG | - | chr8_1:62208113-62208132 | Msa1205740:intron | 40.0% | |
| CTGAAGATGGAGAAGATACA+TGG | - | chr8_1:62208198-62208217 | Msa1205740:CDS | 40.0% | |
| GAGTGCCATGTAGGATAGAT+TGG | + | chr8_1:62206651-62206670 | None:intergenic | 45.0% | |
| !! | CAAAAGAGAGAGTGCCATGT+AGG | + | chr8_1:62206660-62206679 | None:intergenic | 45.0% |
| ! | CGTGCATGAAGTATCTGCTA+GGG | + | chr8_1:62206720-62206739 | None:intergenic | 45.0% |
| CCTAGCAGATACTTCATGCA+CGG | - | chr8_1:62206718-62206737 | Msa1205740:three_prime_UTR | 45.0% | |
| !!! | GTGCCGTTTTCTTCAGAGTT+TGG | + | chr8_1:62206776-62206795 | None:intergenic | 45.0% |
| TTCAATTCAGCTGGTGCATG+TGG | - | chr8_1:62206886-62206905 | Msa1205740:CDS | 45.0% | |
| ! | GCATGTGGATTTGGTTCCTT+TGG | - | chr8_1:62206901-62206920 | Msa1205740:CDS | 45.0% |
| GCCTGAGCAATAAACACTGT+TGG | + | chr8_1:62207189-62207208 | None:intergenic | 45.0% | |
| ! | GCCACTTCTCTATTAGCTCT+TGG | - | chr8_1:62207311-62207330 | Msa1205740:intron | 45.0% |
| GCTTCACCATGGTAAGATCT+AGG | + | chr8_1:62207503-62207522 | None:intergenic | 45.0% | |
| ! | GGTGCTATAATGCTTCACCA+TGG | + | chr8_1:62207514-62207533 | None:intergenic | 45.0% |
| ATGAAACCCTGGAGATAACG+AGG | + | chr8_1:62207601-62207620 | None:intergenic | 45.0% | |
| CAGCAGCAATCCTCATTACT+TGG | - | chr8_1:62207664-62207683 | Msa1205740:intron | 45.0% | |
| CTACAACTTATCGCAGGACA+AGG | + | chr8_1:62207762-62207781 | None:intergenic | 45.0% | |
| CTTAAAGTCAGAGGTCCACT+CGG | + | chr8_1:62208164-62208183 | None:intergenic | 45.0% | |
| ATACCAGAAAACTGGAAGGC+TGG | - | chr8_1:62208239-62208258 | Msa1205740:intron | 45.0% | |
| ATCACAAGCATGTTAGGTGC+AGG | - | chr8_1:62208390-62208409 | Msa1205740:CDS | 45.0% | |
| GAGTGCCATGTAGGATAGAT+TGG | + | chr8_1:62206651-62206670 | None:intergenic | 45.0% | |
| !! | CAAAAGAGAGAGTGCCATGT+AGG | + | chr8_1:62206660-62206679 | None:intergenic | 45.0% |
| ! | CGTGCATGAAGTATCTGCTA+GGG | + | chr8_1:62206720-62206739 | None:intergenic | 45.0% |
| CCTAGCAGATACTTCATGCA+CGG | - | chr8_1:62206718-62206737 | Msa1205740:three_prime_UTR | 45.0% | |
| !!! | GTGCCGTTTTCTTCAGAGTT+TGG | + | chr8_1:62206776-62206795 | None:intergenic | 45.0% |
| TTCAATTCAGCTGGTGCATG+TGG | - | chr8_1:62206886-62206905 | Msa1205740:CDS | 45.0% | |
| ! | GCATGTGGATTTGGTTCCTT+TGG | - | chr8_1:62206901-62206920 | Msa1205740:CDS | 45.0% |
| GCCTGAGCAATAAACACTGT+TGG | + | chr8_1:62207189-62207208 | None:intergenic | 45.0% | |
| ! | GCCACTTCTCTATTAGCTCT+TGG | - | chr8_1:62207311-62207330 | Msa1205740:intron | 45.0% |
| GCTTCACCATGGTAAGATCT+AGG | + | chr8_1:62207503-62207522 | None:intergenic | 45.0% | |
| ! | GGTGCTATAATGCTTCACCA+TGG | + | chr8_1:62207514-62207533 | None:intergenic | 45.0% |
| ATGAAACCCTGGAGATAACG+AGG | + | chr8_1:62207601-62207620 | None:intergenic | 45.0% | |
| CAGCAGCAATCCTCATTACT+TGG | - | chr8_1:62207664-62207683 | Msa1205740:intron | 45.0% | |
| CTACAACTTATCGCAGGACA+AGG | + | chr8_1:62207762-62207781 | None:intergenic | 45.0% | |
| CTTAAAGTCAGAGGTCCACT+CGG | + | chr8_1:62208164-62208183 | None:intergenic | 45.0% | |
| ATACCAGAAAACTGGAAGGC+TGG | - | chr8_1:62208239-62208258 | Msa1205740:intron | 45.0% | |
| ATCACAAGCATGTTAGGTGC+AGG | - | chr8_1:62208390-62208409 | Msa1205740:CDS | 45.0% | |
| ! | CCGTGCATGAAGTATCTGCT+AGG | + | chr8_1:62206721-62206740 | None:intergenic | 50.0% |
| TCAGCTGGTGCATGTGGATT+TGG | - | chr8_1:62206892-62206911 | Msa1205740:CDS | 50.0% | |
| TATCGAGATGGAGTTGGCTG+TGG | - | chr8_1:62206967-62206986 | Msa1205740:CDS | 50.0% | |
| TTAGCCAACGAGCCTTCAGT+GGG | - | chr8_1:62207267-62207286 | Msa1205740:intron | 50.0% | |
| TGGGTAGCTACATGAAACCC+TGG | + | chr8_1:62207612-62207631 | None:intergenic | 50.0% | |
| CGAGTGGACCTCTGACTTTA+AGG | - | chr8_1:62208162-62208181 | Msa1205740:CDS | 50.0% | |
| ! | TCTCCAGCCTTCCAGTTTTC+TGG | + | chr8_1:62208245-62208264 | None:intergenic | 50.0% |
| ! | CCGTGCATGAAGTATCTGCT+AGG | + | chr8_1:62206721-62206740 | None:intergenic | 50.0% |
| TCAGCTGGTGCATGTGGATT+TGG | - | chr8_1:62206892-62206911 | Msa1205740:CDS | 50.0% | |
| TATCGAGATGGAGTTGGCTG+TGG | - | chr8_1:62206967-62206986 | Msa1205740:CDS | 50.0% | |
| TTAGCCAACGAGCCTTCAGT+GGG | - | chr8_1:62207267-62207286 | Msa1205740:intron | 50.0% | |
| TGGGTAGCTACATGAAACCC+TGG | + | chr8_1:62207612-62207631 | None:intergenic | 50.0% | |
| CGAGTGGACCTCTGACTTTA+AGG | - | chr8_1:62208162-62208181 | Msa1205740:CDS | 50.0% | |
| ! | TCTCCAGCCTTCCAGTTTTC+TGG | + | chr8_1:62208245-62208264 | None:intergenic | 50.0% |
| ! | TTGCTCAGGCAACGGTGTCA+CGG | - | chr8_1:62207199-62207218 | Msa1205740:intron | 55.0% |
| CTTAGCCAACGAGCCTTCAG+TGG | - | chr8_1:62207266-62207285 | Msa1205740:intron | 55.0% | |
| GGAGATAACGAGGAGAGGCT+TGG | + | chr8_1:62207591-62207610 | None:intergenic | 55.0% | |
| AGCCTCTCCTCGTTATCTCC+AGG | - | chr8_1:62207591-62207610 | Msa1205740:intron | 55.0% | |
| GCCTCTCCTCGTTATCTCCA+GGG | - | chr8_1:62207592-62207611 | Msa1205740:intron | 55.0% | |
| ACCCTGGAGATAACGAGGAG+AGG | + | chr8_1:62207596-62207615 | None:intergenic | 55.0% | |
| ACTTCTACCTCTCCACCGAG+TGG | - | chr8_1:62208146-62208165 | Msa1205740:CDS | 55.0% | |
| AAAGTCAGAGGTCCACTCGG+TGG | + | chr8_1:62208161-62208180 | None:intergenic | 55.0% | |
| GCTGGAGACACGTATGACTC+AGG | - | chr8_1:62208257-62208276 | Msa1205740:intron | 55.0% | |
| ! | TTGCTCAGGCAACGGTGTCA+CGG | - | chr8_1:62207199-62207218 | Msa1205740:intron | 55.0% |
| CTTAGCCAACGAGCCTTCAG+TGG | - | chr8_1:62207266-62207285 | Msa1205740:intron | 55.0% | |
| GGAGATAACGAGGAGAGGCT+TGG | + | chr8_1:62207591-62207610 | None:intergenic | 55.0% | |
| AGCCTCTCCTCGTTATCTCC+AGG | - | chr8_1:62207591-62207610 | Msa1205740:intron | 55.0% | |
| GCCTCTCCTCGTTATCTCCA+GGG | - | chr8_1:62207592-62207611 | Msa1205740:intron | 55.0% | |
| ACCCTGGAGATAACGAGGAG+AGG | + | chr8_1:62207596-62207615 | None:intergenic | 55.0% | |
| ACTTCTACCTCTCCACCGAG+TGG | - | chr8_1:62208146-62208165 | Msa1205740:CDS | 55.0% | |
| AAAGTCAGAGGTCCACTCGG+TGG | + | chr8_1:62208161-62208180 | None:intergenic | 55.0% | |
| GCTGGAGACACGTATGACTC+AGG | - | chr8_1:62208257-62208276 | Msa1205740:intron | 55.0% | |
| TGGCTGTGGCGCTTGTTTCC+AGG | - | chr8_1:62206981-62207000 | Msa1205740:CDS | 60.0% | |
| CCATCCCACTGAAGGCTCGT+TGG | + | chr8_1:62207274-62207293 | None:intergenic | 60.0% | |
| CCAACGAGCCTTCAGTGGGA+TGG | - | chr8_1:62207271-62207290 | Msa1205740:intron | 60.0% | |
| ! | GCTCTGAGCCATCCCACTGA+AGG | + | chr8_1:62207282-62207301 | None:intergenic | 60.0% |
| CAGTGGGATGGCTCAGAGCA+AGG | - | chr8_1:62207283-62207302 | Msa1205740:intron | 60.0% | |
| AACTGCTGTGCAGCTCTGCG+AGG | - | chr8_1:62207724-62207743 | Msa1205740:intron | 60.0% | |
| ATCGGGATCATGGCGCAGTC+TGG | - | chr8_1:62208123-62208142 | Msa1205740:intron | 60.0% | |
| TGGCTGTGGCGCTTGTTTCC+AGG | - | chr8_1:62206981-62207000 | Msa1205740:CDS | 60.0% | |
| CCATCCCACTGAAGGCTCGT+TGG | + | chr8_1:62207274-62207293 | None:intergenic | 60.0% | |
| CCAACGAGCCTTCAGTGGGA+TGG | - | chr8_1:62207271-62207290 | Msa1205740:intron | 60.0% | |
| ! | GCTCTGAGCCATCCCACTGA+AGG | + | chr8_1:62207282-62207301 | None:intergenic | 60.0% |
| CAGTGGGATGGCTCAGAGCA+AGG | - | chr8_1:62207283-62207302 | Msa1205740:intron | 60.0% | |
| AACTGCTGTGCAGCTCTGCG+AGG | - | chr8_1:62207724-62207743 | Msa1205740:intron | 60.0% | |
| ATCGGGATCATGGCGCAGTC+TGG | - | chr8_1:62208123-62208142 | Msa1205740:intron | 60.0% | |
| ! | CAGAGGTCCACTCGGTGGAG+AGG | + | chr8_1:62208156-62208175 | None:intergenic | 65.0% |
| ! | CAGAGGTCCACTCGGTGGAG+AGG | + | chr8_1:62208156-62208175 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 62206613 | 62208531 | 62206613 | ID=Msa1205740;Name=Msa1205740 |
| chr8_1 | mRNA | 62206613 | 62208531 | 62206613 | ID=Msa1205740-mRNA-1;Parent=Msa1205740;Name=Msa1205740-mRNA-1;_AED=0.11;_eAED=0.11;_QI=49|1|1|1|1|1|5|233|254 |
| chr8_1 | exon | 62206613 | 62207049 | 62206613 | ID=Msa1205740-mRNA-1:exon:20192;Parent=Msa1205740-mRNA-1 |
| chr8_1 | exon | 62207399 | 62207531 | 62207399 | ID=Msa1205740-mRNA-1:exon:20191;Parent=Msa1205740-mRNA-1 |
| chr8_1 | exon | 62207787 | 62207968 | 62207787 | ID=Msa1205740-mRNA-1:exon:20190;Parent=Msa1205740-mRNA-1 |
| chr8_1 | exon | 62208142 | 62208248 | 62208142 | ID=Msa1205740-mRNA-1:exon:20189;Parent=Msa1205740-mRNA-1 |
| chr8_1 | exon | 62208344 | 62208531 | 62208344 | ID=Msa1205740-mRNA-1:exon:20188;Parent=Msa1205740-mRNA-1 |
| chr8_1 | five_prime_UTR | 62208483 | 62208531 | 62208483 | ID=Msa1205740-mRNA-1:five_prime_utr;Parent=Msa1205740-mRNA-1 |
| chr8_1 | CDS | 62208344 | 62208482 | 62208344 | ID=Msa1205740-mRNA-1:cds;Parent=Msa1205740-mRNA-1 |
| chr8_1 | CDS | 62208142 | 62208248 | 62208142 | ID=Msa1205740-mRNA-1:cds;Parent=Msa1205740-mRNA-1 |
| chr8_1 | CDS | 62207787 | 62207968 | 62207787 | ID=Msa1205740-mRNA-1:cds;Parent=Msa1205740-mRNA-1 |
| chr8_1 | CDS | 62207399 | 62207531 | 62207399 | ID=Msa1205740-mRNA-1:cds;Parent=Msa1205740-mRNA-1 |
| chr8_1 | CDS | 62206846 | 62207049 | 62206846 | ID=Msa1205740-mRNA-1:cds;Parent=Msa1205740-mRNA-1 |
| chr8_1 | three_prime_UTR | 62206613 | 62206845 | 62206613 | ID=Msa1205740-mRNA-1:three_prime_utr;Parent=Msa1205740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
