Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1256960 | XP_013457536.1 | 99.213 | 254 | 2 | 0 | 1 | 254 | 1 | 254 | 0.0 | 523 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1256960 | sp|Q850K7|EXLB1_ORYSJ | 64.113 | 248 | 82 | 3 | 9 | 253 | 11 | 254 | 4.74e-115 | 333 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1256960 | A0A072UPE6 | 99.213 | 254 | 2 | 0 | 1 | 254 | 1 | 254 | 0.0 | 523 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0774130 | Msa1256960 | 0.818565 | 1.834305e-52 | -8.615850e-47 |
| Msa1256960 | Msa1329500 | 0.983302 | 2.256992e-157 | -8.615850e-47 |
| Msa1256960 | Msa1329530 | 0.984326 | 3.102243e-160 | -8.615850e-47 |
| Msa1205740 | Msa1256960 | 0.925194 | 2.550841e-90 | -8.615850e-47 |
| Msa1206080 | Msa1256960 | 0.994969 | 8.040762e-212 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1256960 | MtrunA17_Chr4g0055061 | 99.213 | 254 | 2 | 0 | 1 | 254 | 1 | 254 | 0.0 | 523 |
| Msa1256960 | MtrunA17_Chr4g0055561 | 41.036 | 251 | 140 | 2 | 3 | 253 | 9 | 251 | 1.60e-66 | 206 |
| Msa1256960 | MtrunA17_Chr4g0055601 | 41.200 | 250 | 138 | 3 | 3 | 251 | 9 | 250 | 2.12e-66 | 206 |
| Msa1256960 | MtrunA17_Chr5g0399811 | 41.803 | 244 | 139 | 2 | 10 | 253 | 12 | 252 | 1.57e-63 | 199 |
| Msa1256960 | MtrunA17_Chr4g0038741 | 41.026 | 234 | 131 | 5 | 23 | 254 | 17 | 245 | 5.58e-61 | 192 |
| Msa1256960 | MtrunA17_Chr7g0231211 | 36.564 | 227 | 126 | 7 | 29 | 246 | 47 | 264 | 8.53e-38 | 133 |
| Msa1256960 | MtrunA17_Chr7g0231221 | 37.054 | 224 | 127 | 9 | 34 | 248 | 53 | 271 | 4.59e-32 | 118 |
| Msa1256960 | MtrunA17_Chr4g0012801 | 34.894 | 235 | 130 | 10 | 27 | 250 | 40 | 262 | 1.68e-31 | 117 |
| Msa1256960 | MtrunA17_Chr2g0324221 | 33.484 | 221 | 135 | 7 | 34 | 248 | 40 | 254 | 1.65e-30 | 114 |
| Msa1256960 | MtrunA17_Chr2g0324201 | 33.032 | 221 | 136 | 7 | 34 | 248 | 38 | 252 | 2.30e-30 | 114 |
| Msa1256960 | MtrunA17_Chr4g0021641 | 31.674 | 221 | 139 | 7 | 34 | 248 | 46 | 260 | 1.13e-26 | 104 |
| Msa1256960 | MtrunA17_Chr7g0217661 | 29.644 | 253 | 151 | 12 | 3 | 246 | 1 | 235 | 2.12e-19 | 84.3 |
| Msa1256960 | MtrunA17_Chr1g0193631 | 29.915 | 234 | 142 | 10 | 31 | 251 | 32 | 256 | 6.52e-16 | 75.1 |
| Msa1256960 | MtrunA17_Chr3g0092071 | 28.099 | 242 | 139 | 11 | 27 | 251 | 23 | 246 | 8.14e-16 | 74.7 |
| Msa1256960 | MtrunA17_Chr7g0271001 | 27.170 | 265 | 167 | 11 | 1 | 251 | 1 | 253 | 4.35e-15 | 72.8 |
| Msa1256960 | MtrunA17_Chr4g0042521 | 28.631 | 241 | 137 | 11 | 29 | 252 | 25 | 247 | 6.81e-15 | 72.0 |
| Msa1256960 | MtrunA17_Chr8g0360041 | 25.000 | 252 | 155 | 11 | 13 | 247 | 15 | 249 | 2.31e-14 | 70.9 |
| Msa1256960 | MtrunA17_Chr4g0055581 | 38.043 | 92 | 56 | 1 | 95 | 185 | 13 | 104 | 2.95e-14 | 67.0 |
| Msa1256960 | MtrunA17_Chr4g0057091 | 26.966 | 267 | 159 | 10 | 1 | 250 | 12 | 259 | 1.03e-13 | 68.9 |
| Msa1256960 | MtrunA17_Chr7g0218741 | 26.136 | 264 | 162 | 12 | 1 | 247 | 1 | 248 | 1.82e-13 | 68.2 |
| Msa1256960 | MtrunA17_Chr5g0417701 | 28.077 | 260 | 148 | 12 | 6 | 246 | 3 | 242 | 4.46e-13 | 67.0 |
| Msa1256960 | MtrunA17_Chr6g0453341 | 28.194 | 227 | 137 | 10 | 29 | 246 | 38 | 247 | 7.58e-12 | 63.5 |
| Msa1256960 | MtrunA17_Chr3g0107311 | 24.151 | 265 | 163 | 13 | 1 | 247 | 6 | 250 | 1.17e-11 | 63.2 |
| Msa1256960 | MtrunA17_Chr7g0218751 | 25.758 | 264 | 161 | 12 | 1 | 247 | 1 | 246 | 4.30e-11 | 61.2 |
| Msa1256960 | MtrunA17_Chr4g0031621 | 25.658 | 152 | 102 | 4 | 6 | 146 | 8 | 159 | 6.37e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1256960 | AT4G17030.1 | 43.320 | 247 | 132 | 4 | 5 | 250 | 8 | 247 | 8.95e-60 | 189 |
| Msa1256960 | AT4G38400.1 | 42.157 | 204 | 113 | 4 | 52 | 252 | 47 | 248 | 4.46e-53 | 173 |
| Msa1256960 | AT3G45970.2 | 40.284 | 211 | 116 | 6 | 48 | 252 | 15 | 221 | 2.80e-51 | 167 |
| Msa1256960 | AT3G45970.1 | 36.255 | 251 | 146 | 8 | 8 | 252 | 6 | 248 | 1.81e-48 | 161 |
| Msa1256960 | AT3G45960.2 | 36.275 | 204 | 125 | 4 | 52 | 252 | 46 | 247 | 3.19e-46 | 155 |
| Msa1256960 | AT3G45960.1 | 37.629 | 194 | 116 | 4 | 62 | 252 | 8 | 199 | 5.96e-46 | 153 |
| Msa1256960 | AT1G65680.1 | 35.223 | 247 | 138 | 10 | 16 | 250 | 35 | 271 | 1.08e-31 | 118 |
| Msa1256960 | AT1G65681.1 | 30.841 | 214 | 135 | 6 | 44 | 250 | 13 | 220 | 5.96e-29 | 109 |
| Msa1256960 | AT3G60570.1 | 27.925 | 265 | 161 | 12 | 2 | 250 | 5 | 255 | 7.95e-28 | 107 |
| Msa1256960 | AT2G45110.1 | 31.061 | 264 | 157 | 10 | 1 | 248 | 1 | 255 | 3.83e-27 | 105 |
| Msa1256960 | AT2G20750.1 | 30.472 | 233 | 140 | 8 | 29 | 248 | 40 | 263 | 5.16e-26 | 103 |
| Msa1256960 | AT4G28250.1 | 29.344 | 259 | 164 | 11 | 1 | 248 | 6 | 256 | 3.72e-25 | 100 |
| Msa1256960 | AT3G60570.2 | 29.439 | 214 | 129 | 10 | 48 | 250 | 5 | 207 | 3.08e-24 | 97.1 |
| Msa1256960 | AT2G20750.2 | 34.756 | 164 | 89 | 6 | 34 | 185 | 45 | 202 | 1.40e-22 | 92.8 |
| Msa1256960 | AT4G28250.2 | 28.571 | 259 | 160 | 12 | 1 | 248 | 6 | 250 | 7.78e-21 | 89.0 |
| Msa1256960 | AT4G28250.3 | 29.651 | 172 | 108 | 5 | 34 | 200 | 41 | 204 | 7.21e-18 | 79.7 |
| Msa1256960 | AT4G28250.4 | 28.788 | 198 | 124 | 7 | 1 | 190 | 6 | 194 | 2.19e-17 | 78.6 |
| Msa1256960 | AT5G39290.1 | 29.707 | 239 | 132 | 12 | 29 | 250 | 58 | 277 | 2.42e-17 | 79.7 |
| Msa1256960 | AT4G01630.1 | 26.336 | 262 | 166 | 10 | 3 | 250 | 5 | 253 | 4.08e-17 | 78.6 |
| Msa1256960 | AT1G69530.2 | 27.444 | 266 | 160 | 9 | 3 | 252 | 1 | 249 | 5.39e-17 | 78.2 |
| Msa1256960 | AT1G69530.1 | 27.444 | 266 | 160 | 9 | 3 | 252 | 1 | 249 | 5.39e-17 | 78.2 |
| Msa1256960 | AT1G69530.3 | 27.308 | 260 | 157 | 8 | 3 | 246 | 1 | 244 | 8.20e-17 | 78.2 |
| Msa1256960 | AT5G39270.1 | 28.692 | 237 | 137 | 10 | 29 | 250 | 58 | 277 | 3.38e-16 | 76.6 |
| Msa1256960 | AT3G29030.1 | 27.444 | 266 | 151 | 11 | 9 | 249 | 3 | 251 | 1.36e-15 | 74.7 |
| Msa1256960 | AT2G40610.1 | 29.344 | 259 | 146 | 12 | 9 | 249 | 12 | 251 | 1.39e-15 | 74.3 |
| Msa1256960 | AT5G56320.1 | 29.787 | 235 | 131 | 11 | 29 | 246 | 29 | 246 | 2.68e-15 | 73.6 |
| Msa1256960 | AT5G56320.2 | 29.787 | 235 | 131 | 11 | 29 | 246 | 29 | 246 | 2.68e-15 | 73.6 |
| Msa1256960 | AT5G56320.3 | 29.787 | 235 | 131 | 11 | 29 | 246 | 29 | 246 | 3.77e-15 | 73.9 |
| Msa1256960 | AT2G03090.1 | 27.273 | 264 | 157 | 11 | 1 | 246 | 1 | 247 | 7.98e-15 | 72.4 |
| Msa1256960 | AT5G05290.1 | 25.191 | 262 | 165 | 8 | 4 | 249 | 7 | 253 | 1.36e-14 | 71.6 |
| Msa1256960 | AT1G69530.5 | 30.000 | 160 | 88 | 4 | 3 | 146 | 1 | 152 | 1.47e-14 | 71.6 |
| Msa1256960 | AT1G69530.4 | 30.000 | 160 | 88 | 4 | 3 | 146 | 1 | 152 | 1.59e-14 | 70.9 |
| Msa1256960 | AT1G26770.2 | 27.004 | 237 | 141 | 8 | 29 | 249 | 36 | 256 | 5.55e-14 | 70.1 |
| Msa1256960 | AT1G26770.1 | 27.004 | 237 | 141 | 8 | 29 | 249 | 26 | 246 | 7.52e-14 | 69.7 |
| Msa1256960 | AT5G39280.1 | 28.085 | 235 | 135 | 11 | 32 | 250 | 57 | 273 | 1.20e-13 | 69.3 |
| Msa1256960 | AT5G39300.1 | 27.234 | 235 | 137 | 11 | 32 | 250 | 58 | 274 | 8.40e-13 | 67.0 |
| Msa1256960 | AT1G12560.1 | 27.660 | 235 | 135 | 11 | 32 | 248 | 40 | 257 | 5.10e-12 | 64.7 |
| Msa1256960 | AT1G20190.1 | 28.017 | 232 | 144 | 10 | 33 | 251 | 30 | 251 | 1.07e-11 | 63.5 |
| Msa1256960 | AT5G39260.1 | 28.137 | 263 | 150 | 14 | 7 | 247 | 12 | 257 | 1.18e-11 | 63.5 |
| Msa1256960 | AT5G39310.1 | 27.155 | 232 | 138 | 10 | 34 | 250 | 95 | 310 | 2.48e-11 | 63.2 |
Find 73 sgRNAs with CRISPR-Local
Find 234 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACATGAAATTAACTTAAAT+TGG | 0.102970 | 8_2:+57280410 | None:intergenic |
| TTATTTCTTTCTTTCATAAA+AGG | 0.152556 | 8_2:+57280485 | None:intergenic |
| TCCTTTGGTGCTACTATTAA+TGG | 0.182330 | 8_2:-57281904 | Msa1256960:CDS |
| ATAAAATAAGTAATAGAATA+AGG | 0.219174 | 8_2:-57280383 | Msa1256960:three_prime_UTR |
| CGAGTGGACCTCTGACTTTA+AGG | 0.275810 | 8_2:-57280662 | Msa1256960:CDS |
| TCAGCTGGTGCATGTGGATT+TGG | 0.335177 | 8_2:-57281928 | Msa1256960:intron |
| TTAATAACATACCAGAAAAC+TGG | 0.365399 | 8_2:-57280593 | Msa1256960:CDS |
| GCATGTGGATTTGGTTCCTT+TGG | 0.368760 | 8_2:-57281919 | Msa1256960:CDS |
| CAGCAGCAATCCTCATTACT+TGG | 0.374855 | 8_2:-57281160 | Msa1256960:CDS |
| TCATTGATCACAAGCATGTT+AGG | 0.397769 | 8_2:-57280440 | Msa1256960:three_prime_UTR |
| GCCACTTCTCTATTAGCTCT+TGG | 0.398126 | 8_2:-57281514 | Msa1256960:CDS |
| TAAAATAAGTAATAGAATAA+GGG | 0.408157 | 8_2:-57280382 | Msa1256960:three_prime_UTR |
| TATTTCTTTCTTTCATAAAA+GGG | 0.408828 | 8_2:+57280486 | None:intergenic |
| ACATGAAATTAACTTAAATT+GGG | 0.426524 | 8_2:+57280411 | None:intergenic |
| ATCGGGATCATGGCGCAGTC+TGG | 0.433963 | 8_2:-57280701 | Msa1256960:CDS |
| AATAGAATAAGGGTAGAAAT+CGG | 0.435339 | 8_2:-57280372 | Msa1256960:three_prime_UTR |
| TTGTCTGCAAGTTACTGAAT+CGG | 0.443111 | 8_2:-57280719 | Msa1256960:CDS |
| ACCAACAGTGTTTATTGCTC+AGG | 0.451315 | 8_2:-57281640 | Msa1256960:CDS |
| GAGTGCCATGTAGGATAGAT+TGG | 0.451929 | 8_2:+57282172 | None:intergenic |
| TGTCTGCAAGTTACTGAATC+GGG | 0.467993 | 8_2:-57280718 | Msa1256960:CDS |
| ATGTTGTTTAGTACTGAAGA+TGG | 0.475387 | 8_2:-57280639 | Msa1256960:CDS |
| TTGGTGCTACTATTAATGGT+GGG | 0.486435 | 8_2:-57281900 | Msa1256960:CDS |
| TGGCTGTGGCGCTTGTTACC+AGG | 0.495163 | 8_2:-57281839 | Msa1256960:intron |
| AGTTTGGTTTGGGAGAGATA+AGG | 0.500710 | 8_2:-57280323 | Msa1256960:three_prime_UTR |
| TACCCAAACTCTGAAGAAAA+CGG | 0.503927 | 8_2:-57282050 | Msa1256960:CDS |
| TATCGAGATGGAGTTGGCTG+TGG | 0.504204 | 8_2:-57281853 | Msa1256960:CDS |
| ATACCAGAAAACTGGAAGGC+TGG | 0.508235 | 8_2:-57280585 | Msa1256960:CDS |
| TATTAATGGTGGGGATGTAT+CGG | 0.511398 | 8_2:-57281890 | Msa1256960:CDS |
| CTGAAGATGGAGAAGATACA+TGG | 0.511542 | 8_2:-57280626 | Msa1256960:CDS |
| ATCACAAGCATGTTAGGTGC+AGG | 0.523556 | 8_2:-57280434 | Msa1256960:three_prime_UTR |
| TTTGGTGCTACTATTAATGG+TGG | 0.523991 | 8_2:-57281901 | Msa1256960:CDS |
| TCTTATGGTTTCAACAAGGA+AGG | 0.526309 | 8_2:-57281131 | Msa1256960:CDS |
| GCTCTGAGCCATCCCACTGA+AGG | 0.529367 | 8_2:+57281546 | None:intergenic |
| AAGTTACTGAATCGGGATCA+TGG | 0.530799 | 8_2:-57280711 | Msa1256960:CDS |
| AGTCTTTATCGAGATGGAGT+TGG | 0.533818 | 8_2:-57281859 | Msa1256960:CDS |
| GAATAAGGGTAGAAATCGGA+TGG | 0.534776 | 8_2:-57280368 | Msa1256960:three_prime_UTR |
| CCGTGCATGAAGTATCTGCT+AGG | 0.547466 | 8_2:+57282102 | None:intergenic |
| CAAAAGAGAGAGTGCCATGT+AGG | 0.547916 | 8_2:+57282163 | None:intergenic |
| CAATGATATGATAAACTCAC+AGG | 0.562125 | 8_2:+57280457 | None:intergenic |
| TTCAATTCAGCTGGTGCATG+TGG | 0.563025 | 8_2:-57281934 | Msa1256960:intron |
| GCATCTAGTCTTTATCGAGA+TGG | 0.564142 | 8_2:-57281865 | Msa1256960:CDS |
| AAGACAAAAGCCAAGTAATG+AGG | 0.564537 | 8_2:+57281150 | None:intergenic |
| AGTGTTTATTGCTCAGGCAA+CGG | 0.564581 | 8_2:-57281634 | Msa1256960:CDS |
| CCATCCCACTGAAGGCTCGT+TGG | 0.571650 | 8_2:+57281554 | None:intergenic |
| CTTAGCCAACGAGCCTTCAG+TGG | 0.574950 | 8_2:-57281559 | Msa1256960:CDS |
| TTGCTCAGGCAACGGTGTCA+CGG | 0.576990 | 8_2:-57281626 | Msa1256960:CDS |
| ACCAAGAGCTAATAGAGAAG+TGG | 0.578632 | 8_2:+57281513 | None:intergenic |
| CAGTGGGATGGCTCAGAGCA+AGG | 0.580727 | 8_2:-57281542 | Msa1256960:CDS |
| TATGGTTTCAACAAGGAAGG+AGG | 0.586212 | 8_2:-57281128 | Msa1256960:CDS |
| CAGAGGTCCACTCGGTGGAG+AGG | 0.586885 | 8_2:+57280671 | None:intergenic |
| CGTGCATGAAGTATCTGCTA+GGG | 0.588324 | 8_2:+57282103 | None:intergenic |
| TAGGGTTTGCATGAAAAGAA+AGG | 0.589727 | 8_2:+57282121 | None:intergenic |
| TGGTGCTACTATTAATGGTG+GGG | 0.595103 | 8_2:-57281899 | Msa1256960:CDS |
| GCTGGAGACACGTATGACTC+AGG | 0.595961 | 8_2:-57280567 | Msa1256960:CDS |
| ACCATTAATAGTAGCACCAA+AGG | 0.596692 | 8_2:+57281903 | None:intergenic |
| AAAGCAGTCAGAACTCAGAA+TGG | 0.603710 | 8_2:+57282197 | None:intergenic |
| ATGGTTTCAACAAGGAAGGA+GGG | 0.609790 | 8_2:-57281127 | Msa1256960:CDS |
| CTTAAAGTCAGAGGTCCACT+CGG | 0.610489 | 8_2:+57280663 | None:intergenic |
| GCCTGAGCAATAAACACTGT+TGG | 0.617408 | 8_2:+57281639 | None:intergenic |
| AACAACATCCTTAAAGTCAG+AGG | 0.617433 | 8_2:+57280654 | None:intergenic |
| TTAGCCAACGAGCCTTCAGT+GGG | 0.618388 | 8_2:-57281558 | Msa1256960:CDS |
| CCAACGAGCCTTCAGTGGGA+TGG | 0.622367 | 8_2:-57281554 | Msa1256960:CDS |
| TTTATCCAATCTATCCTACA+TGG | 0.626437 | 8_2:-57282177 | Msa1256960:exon |
| CCTAGCAGATACTTCATGCA+CGG | 0.630897 | 8_2:-57282102 | Msa1256960:CDS |
| TCGTTGGCTAAGAATGAAGT+CGG | 0.641482 | 8_2:+57281570 | None:intergenic |
| AATAAGGGTAGAAATCGGAT+GGG | 0.653026 | 8_2:-57280367 | Msa1256960:three_prime_UTR |
| AACTGCTGTGCAGCTCTGCG+AGG | 0.656781 | 8_2:-57281100 | Msa1256960:intron |
| TAACATACCAGAAAACTGGA+AGG | 0.663849 | 8_2:-57280589 | Msa1256960:CDS |
| TAGTTAATATTGAATACAGA+CGG | 0.665226 | 8_2:-57281489 | Msa1256960:intron |
| GGTTTGCATGAAAAGAAAGG+TGG | 0.670977 | 8_2:+57282124 | None:intergenic |
| ACTTCTACCTCTCCACCGAG+TGG | 0.678558 | 8_2:-57280678 | Msa1256960:CDS |
| AAAGTCAGAGGTCCACTCGG+TGG | 0.693232 | 8_2:+57280666 | None:intergenic |
| TTTGTCTTATGGTTTCAACA+AGG | 0.712343 | 8_2:-57281135 | Msa1256960:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCTTCTAAATTTAATTATTT+GGG | + | chr8_2:57281602-57281621 | None:intergenic | 10.0% |
| !! | ATAAAATAAGTAATAGAATA+AGG | - | chr8_2:57282138-57282157 | Msa1256960:CDS | 10.0% |
| !! | TAAAATAAGTAATAGAATAA+GGG | - | chr8_2:57282139-57282158 | Msa1256960:CDS | 10.0% |
| !! | TCTTCTAAATTTAATTATTT+GGG | + | chr8_2:57281602-57281621 | None:intergenic | 10.0% |
| !! | ATAAAATAAGTAATAGAATA+AGG | - | chr8_2:57282138-57282157 | Msa1256960:CDS | 10.0% |
| !! | TAAAATAAGTAATAGAATAA+GGG | - | chr8_2:57282139-57282158 | Msa1256960:CDS | 10.0% |
| !!! | TAATTGTAATGTTTTTGTTT+GGG | + | chr8_2:57281328-57281347 | None:intergenic | 15.0% |
| !!! | TTAATTGTAATGTTTTTGTT+TGG | + | chr8_2:57281329-57281348 | None:intergenic | 15.0% |
| !! | CTCTTCTAAATTTAATTATT+TGG | + | chr8_2:57281603-57281622 | None:intergenic | 15.0% |
| !! | TATTTCTTTCTTTCATAAAA+GGG | + | chr8_2:57282038-57282057 | None:intergenic | 15.0% |
| !!! | TTATTTCTTTCTTTCATAAA+AGG | + | chr8_2:57282039-57282058 | None:intergenic | 15.0% |
| !! | ACATGAAATTAACTTAAATT+GGG | + | chr8_2:57282113-57282132 | None:intergenic | 15.0% |
| !! | AACATGAAATTAACTTAAAT+TGG | + | chr8_2:57282114-57282133 | None:intergenic | 15.0% |
| !!! | AGTTATTTTTTATGTTAGTT+TGG | - | chr8_2:57282182-57282201 | Msa1256960:five_prime_UTR | 15.0% |
| !!! | TAATTGTAATGTTTTTGTTT+GGG | + | chr8_2:57281328-57281347 | None:intergenic | 15.0% |
| !!! | TTAATTGTAATGTTTTTGTT+TGG | + | chr8_2:57281329-57281348 | None:intergenic | 15.0% |
| !! | CTCTTCTAAATTTAATTATT+TGG | + | chr8_2:57281603-57281622 | None:intergenic | 15.0% |
| !! | TATTTCTTTCTTTCATAAAA+GGG | + | chr8_2:57282038-57282057 | None:intergenic | 15.0% |
| !!! | TTATTTCTTTCTTTCATAAA+AGG | + | chr8_2:57282039-57282058 | None:intergenic | 15.0% |
| !! | ACATGAAATTAACTTAAATT+GGG | + | chr8_2:57282113-57282132 | None:intergenic | 15.0% |
| !! | AACATGAAATTAACTTAAAT+TGG | + | chr8_2:57282114-57282133 | None:intergenic | 15.0% |
| !!! | AGTTATTTTTTATGTTAGTT+TGG | - | chr8_2:57282182-57282201 | Msa1256960:five_prime_UTR | 15.0% |
| !!! | ATTTTTCATTATTCTTTGAC+AGG | - | chr8_2:57280850-57280869 | Msa1256960:intron | 20.0% |
| !! | TAGTTAATATTGAATACAGA+CGG | - | chr8_2:57281032-57281051 | Msa1256960:intron | 20.0% |
| !! | ATTATATGTAAACATAACCA+AGG | - | chr8_2:57281267-57281286 | Msa1256960:intron | 20.0% |
| !!! | TTCGAAAGTTTTAGTTTATT+TGG | + | chr8_2:57281499-57281518 | None:intergenic | 20.0% |
| !! | ATAAACTAAAACTTTCGAAT+AGG | - | chr8_2:57281500-57281519 | Msa1256960:CDS | 20.0% |
| !!! | TTTTTTATGTTAGTTTGGTT+TGG | - | chr8_2:57282187-57282206 | Msa1256960:five_prime_UTR | 20.0% |
| !!! | TTTTTATGTTAGTTTGGTTT+GGG | - | chr8_2:57282188-57282207 | Msa1256960:five_prime_UTR | 20.0% |
| !!! | ATTTTTCATTATTCTTTGAC+AGG | - | chr8_2:57280850-57280869 | Msa1256960:intron | 20.0% |
| !! | TAGTTAATATTGAATACAGA+CGG | - | chr8_2:57281032-57281051 | Msa1256960:intron | 20.0% |
| !! | ATTATATGTAAACATAACCA+AGG | - | chr8_2:57281267-57281286 | Msa1256960:intron | 20.0% |
| !!! | TTCGAAAGTTTTAGTTTATT+TGG | + | chr8_2:57281499-57281518 | None:intergenic | 20.0% |
| !! | ATAAACTAAAACTTTCGAAT+AGG | - | chr8_2:57281500-57281519 | Msa1256960:CDS | 20.0% |
| !!! | TTTTTTATGTTAGTTTGGTT+TGG | - | chr8_2:57282187-57282206 | Msa1256960:five_prime_UTR | 20.0% |
| !!! | TTTTTATGTTAGTTTGGTTT+GGG | - | chr8_2:57282188-57282207 | Msa1256960:five_prime_UTR | 20.0% |
| ! | AGTTTATTTGTGAATGTCAA+AGG | + | chr8_2:57280785-57280804 | None:intergenic | 25.0% |
| ! | AAAATTGATGCATGGAAAAA+AGG | + | chr8_2:57281237-57281256 | None:intergenic | 25.0% |
| ! | AAACGTAAAAAATTGATGCA+TGG | + | chr8_2:57281245-57281264 | None:intergenic | 25.0% |
| ! | AAACTTTCGAATAGGTTATT+TGG | - | chr8_2:57281508-57281527 | Msa1256960:CDS | 25.0% |
| !!! | TTAGTTTCAAGTTTCAACAT+AGG | + | chr8_2:57281569-57281588 | None:intergenic | 25.0% |
| !!! | TTTTCTGGTATGTTATTAAC+AGG | + | chr8_2:57281927-57281946 | None:intergenic | 25.0% |
| ! | TTAATAACATACCAGAAAAC+TGG | - | chr8_2:57281928-57281947 | Msa1256960:intron | 25.0% |
| ! | AATAGAATAAGGGTAGAAAT+CGG | - | chr8_2:57282149-57282168 | Msa1256960:CDS | 25.0% |
| ! | AGTTTATTTGTGAATGTCAA+AGG | + | chr8_2:57280785-57280804 | None:intergenic | 25.0% |
| ! | AAAATTGATGCATGGAAAAA+AGG | + | chr8_2:57281237-57281256 | None:intergenic | 25.0% |
| ! | AAACGTAAAAAATTGATGCA+TGG | + | chr8_2:57281245-57281264 | None:intergenic | 25.0% |
| ! | AAACTTTCGAATAGGTTATT+TGG | - | chr8_2:57281508-57281527 | Msa1256960:CDS | 25.0% |
| !!! | TTAGTTTCAAGTTTCAACAT+AGG | + | chr8_2:57281569-57281588 | None:intergenic | 25.0% |
| !!! | TTTTCTGGTATGTTATTAAC+AGG | + | chr8_2:57281927-57281946 | None:intergenic | 25.0% |
| ! | TTAATAACATACCAGAAAAC+TGG | - | chr8_2:57281928-57281947 | Msa1256960:intron | 25.0% |
| ! | AATAGAATAAGGGTAGAAAT+CGG | - | chr8_2:57282149-57282168 | Msa1256960:CDS | 25.0% |
| TTTATCCAATCTATCCTACA+TGG | - | chr8_2:57280344-57280363 | Msa1256960:three_prime_UTR | 30.0% | |
| ! | TCTTTTGAATTCAATTCAGC+TGG | - | chr8_2:57280578-57280597 | Msa1256960:CDS | 30.0% |
| AGTTATTGTCGTATGAAAAC+TGG | - | chr8_2:57281114-57281133 | Msa1256960:CDS | 30.0% | |
| !! | ATTACTTGGCTTTTGTCTTA+TGG | - | chr8_2:57281375-57281394 | Msa1256960:intron | 30.0% |
| TTTGTCTTATGGTTTCAACA+AGG | - | chr8_2:57281386-57281405 | Msa1256960:intron | 30.0% | |
| ! | AAGACATTTTTCACATGTAG+TGG | + | chr8_2:57281632-57281651 | None:intergenic | 30.0% |
| TAGAGAAAACTAAGAACGAA+AGG | - | chr8_2:57281715-57281734 | Msa1256960:intron | 30.0% | |
| ! | ATGTTGTTTAGTACTGAAGA+TGG | - | chr8_2:57281882-57281901 | Msa1256960:CDS | 30.0% |
| ! | ATATTTTGCTGCATCTCTAT+TGG | + | chr8_2:57281992-57282011 | None:intergenic | 30.0% |
| CAATGATATGATAAACTCAC+AGG | + | chr8_2:57282067-57282086 | None:intergenic | 30.0% | |
| TTTATCCAATCTATCCTACA+TGG | - | chr8_2:57280344-57280363 | Msa1256960:three_prime_UTR | 30.0% | |
| ! | TCTTTTGAATTCAATTCAGC+TGG | - | chr8_2:57280578-57280597 | Msa1256960:CDS | 30.0% |
| AGTTATTGTCGTATGAAAAC+TGG | - | chr8_2:57281114-57281133 | Msa1256960:CDS | 30.0% | |
| !! | ATTACTTGGCTTTTGTCTTA+TGG | - | chr8_2:57281375-57281394 | Msa1256960:intron | 30.0% |
| TTTGTCTTATGGTTTCAACA+AGG | - | chr8_2:57281386-57281405 | Msa1256960:intron | 30.0% | |
| ! | AAGACATTTTTCACATGTAG+TGG | + | chr8_2:57281632-57281651 | None:intergenic | 30.0% |
| TAGAGAAAACTAAGAACGAA+AGG | - | chr8_2:57281715-57281734 | Msa1256960:intron | 30.0% | |
| ! | ATGTTGTTTAGTACTGAAGA+TGG | - | chr8_2:57281882-57281901 | Msa1256960:CDS | 30.0% |
| ! | ATATTTTGCTGCATCTCTAT+TGG | + | chr8_2:57281992-57282011 | None:intergenic | 30.0% |
| CAATGATATGATAAACTCAC+AGG | + | chr8_2:57282067-57282086 | None:intergenic | 30.0% | |
| TAGGGTTTGCATGAAAAGAA+AGG | + | chr8_2:57280403-57280422 | None:intergenic | 35.0% | |
| ! | TACCCAAACTCTGAAGAAAA+CGG | - | chr8_2:57280471-57280490 | Msa1256960:three_prime_UTR | 35.0% |
| !! | TCCTTTGGTGCTACTATTAA+TGG | - | chr8_2:57280617-57280636 | Msa1256960:CDS | 35.0% |
| ACCATTAATAGTAGCACCAA+AGG | + | chr8_2:57280621-57280640 | None:intergenic | 35.0% | |
| !! | TTTGGTGCTACTATTAATGG+TGG | - | chr8_2:57280620-57280639 | Msa1256960:CDS | 35.0% |
| !! | TTGGTGCTACTATTAATGGT+GGG | - | chr8_2:57280621-57280640 | Msa1256960:CDS | 35.0% |
| ! | TATTAATGGTGGGGATGTAT+CGG | - | chr8_2:57280631-57280650 | Msa1256960:CDS | 35.0% |
| TCATTATTCTTTGACAGGTG+AGG | - | chr8_2:57280855-57280874 | Msa1256960:intron | 35.0% | |
| !!! | ACGGTAGTTTTAACTGATCA+AGG | - | chr8_2:57280914-57280933 | Msa1256960:intron | 35.0% |
| ACTCATTGCAGATGTATCAT+CGG | + | chr8_2:57281166-57281185 | None:intergenic | 35.0% | |
| AAGACAAAAGCCAAGTAATG+AGG | + | chr8_2:57281374-57281393 | None:intergenic | 35.0% | |
| TCTTATGGTTTCAACAAGGA+AGG | - | chr8_2:57281390-57281409 | Msa1256960:intron | 35.0% | |
| TTGTCTGCAAGTTACTGAAT+CGG | - | chr8_2:57281802-57281821 | Msa1256960:intron | 35.0% | |
| AACAACATCCTTAAAGTCAG+AGG | + | chr8_2:57281870-57281889 | None:intergenic | 35.0% | |
| TAACATACCAGAAAACTGGA+AGG | - | chr8_2:57281932-57281951 | Msa1256960:intron | 35.0% | |
| TCATTGATCACAAGCATGTT+AGG | - | chr8_2:57282081-57282100 | Msa1256960:CDS | 35.0% | |
| AATAAGGGTAGAAATCGGAT+GGG | - | chr8_2:57282154-57282173 | Msa1256960:CDS | 35.0% | |
| TAGGGTTTGCATGAAAAGAA+AGG | + | chr8_2:57280403-57280422 | None:intergenic | 35.0% | |
| ! | TACCCAAACTCTGAAGAAAA+CGG | - | chr8_2:57280471-57280490 | Msa1256960:three_prime_UTR | 35.0% |
| !! | TCCTTTGGTGCTACTATTAA+TGG | - | chr8_2:57280617-57280636 | Msa1256960:CDS | 35.0% |
| ACCATTAATAGTAGCACCAA+AGG | + | chr8_2:57280621-57280640 | None:intergenic | 35.0% | |
| !! | TTTGGTGCTACTATTAATGG+TGG | - | chr8_2:57280620-57280639 | Msa1256960:CDS | 35.0% |
| !! | TTGGTGCTACTATTAATGGT+GGG | - | chr8_2:57280621-57280640 | Msa1256960:CDS | 35.0% |
| ! | TATTAATGGTGGGGATGTAT+CGG | - | chr8_2:57280631-57280650 | Msa1256960:CDS | 35.0% |
| TCATTATTCTTTGACAGGTG+AGG | - | chr8_2:57280855-57280874 | Msa1256960:intron | 35.0% | |
| !!! | ACGGTAGTTTTAACTGATCA+AGG | - | chr8_2:57280914-57280933 | Msa1256960:intron | 35.0% |
| ACTCATTGCAGATGTATCAT+CGG | + | chr8_2:57281166-57281185 | None:intergenic | 35.0% | |
| AAGACAAAAGCCAAGTAATG+AGG | + | chr8_2:57281374-57281393 | None:intergenic | 35.0% | |
| TCTTATGGTTTCAACAAGGA+AGG | - | chr8_2:57281390-57281409 | Msa1256960:intron | 35.0% | |
| TTGTCTGCAAGTTACTGAAT+CGG | - | chr8_2:57281802-57281821 | Msa1256960:intron | 35.0% | |
| AACAACATCCTTAAAGTCAG+AGG | + | chr8_2:57281870-57281889 | None:intergenic | 35.0% | |
| TAACATACCAGAAAACTGGA+AGG | - | chr8_2:57281932-57281951 | Msa1256960:intron | 35.0% | |
| TCATTGATCACAAGCATGTT+AGG | - | chr8_2:57282081-57282100 | Msa1256960:CDS | 35.0% | |
| AATAAGGGTAGAAATCGGAT+GGG | - | chr8_2:57282154-57282173 | Msa1256960:CDS | 35.0% | |
| AAAGCAGTCAGAACTCAGAA+TGG | + | chr8_2:57280327-57280346 | None:intergenic | 40.0% | |
| GGTTTGCATGAAAAGAAAGG+TGG | + | chr8_2:57280400-57280419 | None:intergenic | 40.0% | |
| !!! | TGCCGTTTTCTTCAGAGTTT+GGG | + | chr8_2:57280476-57280495 | None:intergenic | 40.0% |
| !! | TGGTGCTACTATTAATGGTG+GGG | - | chr8_2:57280622-57280641 | Msa1256960:CDS | 40.0% |
| ! | GCATCTAGTCTTTATCGAGA+TGG | - | chr8_2:57280656-57280675 | Msa1256960:CDS | 40.0% |
| AGTCTTTATCGAGATGGAGT+TGG | - | chr8_2:57280662-57280681 | Msa1256960:CDS | 40.0% | |
| TGTATAGATGTGTTGTCACC+TGG | + | chr8_2:57280703-57280722 | None:intergenic | 40.0% | |
| ACCAACAGTGTTTATTGCTC+AGG | - | chr8_2:57280881-57280900 | Msa1256960:intron | 40.0% | |
| AGTGTTTATTGCTCAGGCAA+CGG | - | chr8_2:57280887-57280906 | Msa1256960:intron | 40.0% | |
| !!! | GTTTTAACTGATCAAGGCTC+AGG | - | chr8_2:57280920-57280939 | Msa1256960:intron | 40.0% |
| ! | TCGTTGGCTAAGAATGAAGT+CGG | + | chr8_2:57280954-57280973 | None:intergenic | 40.0% |
| ACCAAGAGCTAATAGAGAAG+TGG | + | chr8_2:57281011-57281030 | None:intergenic | 40.0% | |
| ! | CTTTTCCCTAGATCTTACCA+TGG | - | chr8_2:57281190-57281209 | Msa1256960:CDS | 40.0% |
| CTTCACCATGGTAAGATCTA+GGG | + | chr8_2:57281198-57281217 | None:intergenic | 40.0% | |
| GATGCATGGAAAAAAGGACA+TGG | + | chr8_2:57281231-57281250 | None:intergenic | 40.0% | |
| TATGGTTTCAACAAGGAAGG+AGG | - | chr8_2:57281393-57281412 | Msa1256960:intron | 40.0% | |
| ATGGTTTCAACAAGGAAGGA+GGG | - | chr8_2:57281394-57281413 | Msa1256960:intron | 40.0% | |
| CACAAACTACAACTTATCGC+AGG | + | chr8_2:57281465-57281484 | None:intergenic | 40.0% | |
| TGTCTGCAAGTTACTGAATC+GGG | - | chr8_2:57281803-57281822 | Msa1256960:intron | 40.0% | |
| AAGTTACTGAATCGGGATCA+TGG | - | chr8_2:57281810-57281829 | Msa1256960:intron | 40.0% | |
| CTGAAGATGGAGAAGATACA+TGG | - | chr8_2:57281895-57281914 | Msa1256960:CDS | 40.0% | |
| GAATAAGGGTAGAAATCGGA+TGG | - | chr8_2:57282153-57282172 | Msa1256960:CDS | 40.0% | |
| !! | AGTTTGGTTTGGGAGAGATA+AGG | - | chr8_2:57282198-57282217 | Msa1256960:five_prime_UTR | 40.0% |
| AAAGCAGTCAGAACTCAGAA+TGG | + | chr8_2:57280327-57280346 | None:intergenic | 40.0% | |
| GGTTTGCATGAAAAGAAAGG+TGG | + | chr8_2:57280400-57280419 | None:intergenic | 40.0% | |
| !!! | TGCCGTTTTCTTCAGAGTTT+GGG | + | chr8_2:57280476-57280495 | None:intergenic | 40.0% |
| !! | TGGTGCTACTATTAATGGTG+GGG | - | chr8_2:57280622-57280641 | Msa1256960:CDS | 40.0% |
| ! | GCATCTAGTCTTTATCGAGA+TGG | - | chr8_2:57280656-57280675 | Msa1256960:CDS | 40.0% |
| AGTCTTTATCGAGATGGAGT+TGG | - | chr8_2:57280662-57280681 | Msa1256960:CDS | 40.0% | |
| TGTATAGATGTGTTGTCACC+TGG | + | chr8_2:57280703-57280722 | None:intergenic | 40.0% | |
| ACCAACAGTGTTTATTGCTC+AGG | - | chr8_2:57280881-57280900 | Msa1256960:intron | 40.0% | |
| AGTGTTTATTGCTCAGGCAA+CGG | - | chr8_2:57280887-57280906 | Msa1256960:intron | 40.0% | |
| !!! | GTTTTAACTGATCAAGGCTC+AGG | - | chr8_2:57280920-57280939 | Msa1256960:intron | 40.0% |
| ! | TCGTTGGCTAAGAATGAAGT+CGG | + | chr8_2:57280954-57280973 | None:intergenic | 40.0% |
| ACCAAGAGCTAATAGAGAAG+TGG | + | chr8_2:57281011-57281030 | None:intergenic | 40.0% | |
| ! | CTTTTCCCTAGATCTTACCA+TGG | - | chr8_2:57281190-57281209 | Msa1256960:CDS | 40.0% |
| CTTCACCATGGTAAGATCTA+GGG | + | chr8_2:57281198-57281217 | None:intergenic | 40.0% | |
| GATGCATGGAAAAAAGGACA+TGG | + | chr8_2:57281231-57281250 | None:intergenic | 40.0% | |
| TATGGTTTCAACAAGGAAGG+AGG | - | chr8_2:57281393-57281412 | Msa1256960:intron | 40.0% | |
| ATGGTTTCAACAAGGAAGGA+GGG | - | chr8_2:57281394-57281413 | Msa1256960:intron | 40.0% | |
| CACAAACTACAACTTATCGC+AGG | + | chr8_2:57281465-57281484 | None:intergenic | 40.0% | |
| TGTCTGCAAGTTACTGAATC+GGG | - | chr8_2:57281803-57281822 | Msa1256960:intron | 40.0% | |
| AAGTTACTGAATCGGGATCA+TGG | - | chr8_2:57281810-57281829 | Msa1256960:intron | 40.0% | |
| CTGAAGATGGAGAAGATACA+TGG | - | chr8_2:57281895-57281914 | Msa1256960:CDS | 40.0% | |
| GAATAAGGGTAGAAATCGGA+TGG | - | chr8_2:57282153-57282172 | Msa1256960:CDS | 40.0% | |
| !! | AGTTTGGTTTGGGAGAGATA+AGG | - | chr8_2:57282198-57282217 | Msa1256960:five_prime_UTR | 40.0% |
| GAGTGCCATGTAGGATAGAT+TGG | + | chr8_2:57280352-57280371 | None:intergenic | 45.0% | |
| !! | CAAAAGAGAGAGTGCCATGT+AGG | + | chr8_2:57280361-57280380 | None:intergenic | 45.0% |
| ! | CGTGCATGAAGTATCTGCTA+GGG | + | chr8_2:57280421-57280440 | None:intergenic | 45.0% |
| CCTAGCAGATACTTCATGCA+CGG | - | chr8_2:57280419-57280438 | Msa1256960:three_prime_UTR | 45.0% | |
| !!! | GTGCCGTTTTCTTCAGAGTT+TGG | + | chr8_2:57280477-57280496 | None:intergenic | 45.0% |
| TTCAATTCAGCTGGTGCATG+TGG | - | chr8_2:57280587-57280606 | Msa1256960:CDS | 45.0% | |
| ! | GCATGTGGATTTGGTTCCTT+TGG | - | chr8_2:57280602-57280621 | Msa1256960:CDS | 45.0% |
| GCCTGAGCAATAAACACTGT+TGG | + | chr8_2:57280885-57280904 | None:intergenic | 45.0% | |
| ! | GCCACTTCTCTATTAGCTCT+TGG | - | chr8_2:57281007-57281026 | Msa1256960:intron | 45.0% |
| GCTTCACCATGGTAAGATCT+AGG | + | chr8_2:57281199-57281218 | None:intergenic | 45.0% | |
| ! | GGTGCTATAATGCTTCACCA+TGG | + | chr8_2:57281210-57281229 | None:intergenic | 45.0% |
| ATGAAACCCTGGAGATAACG+AGG | + | chr8_2:57281298-57281317 | None:intergenic | 45.0% | |
| CAGCAGCAATCCTCATTACT+TGG | - | chr8_2:57281361-57281380 | Msa1256960:intron | 45.0% | |
| CTACAACTTATCGCAGGACA+AGG | + | chr8_2:57281459-57281478 | None:intergenic | 45.0% | |
| CTTAAAGTCAGAGGTCCACT+CGG | + | chr8_2:57281861-57281880 | None:intergenic | 45.0% | |
| ATACCAGAAAACTGGAAGGC+TGG | - | chr8_2:57281936-57281955 | Msa1256960:intron | 45.0% | |
| ATCACAAGCATGTTAGGTGC+AGG | - | chr8_2:57282087-57282106 | Msa1256960:CDS | 45.0% | |
| GAGTGCCATGTAGGATAGAT+TGG | + | chr8_2:57280352-57280371 | None:intergenic | 45.0% | |
| !! | CAAAAGAGAGAGTGCCATGT+AGG | + | chr8_2:57280361-57280380 | None:intergenic | 45.0% |
| ! | CGTGCATGAAGTATCTGCTA+GGG | + | chr8_2:57280421-57280440 | None:intergenic | 45.0% |
| CCTAGCAGATACTTCATGCA+CGG | - | chr8_2:57280419-57280438 | Msa1256960:three_prime_UTR | 45.0% | |
| !!! | GTGCCGTTTTCTTCAGAGTT+TGG | + | chr8_2:57280477-57280496 | None:intergenic | 45.0% |
| TTCAATTCAGCTGGTGCATG+TGG | - | chr8_2:57280587-57280606 | Msa1256960:CDS | 45.0% | |
| ! | GCATGTGGATTTGGTTCCTT+TGG | - | chr8_2:57280602-57280621 | Msa1256960:CDS | 45.0% |
| GCCTGAGCAATAAACACTGT+TGG | + | chr8_2:57280885-57280904 | None:intergenic | 45.0% | |
| ! | GCCACTTCTCTATTAGCTCT+TGG | - | chr8_2:57281007-57281026 | Msa1256960:intron | 45.0% |
| GCTTCACCATGGTAAGATCT+AGG | + | chr8_2:57281199-57281218 | None:intergenic | 45.0% | |
| ! | GGTGCTATAATGCTTCACCA+TGG | + | chr8_2:57281210-57281229 | None:intergenic | 45.0% |
| ATGAAACCCTGGAGATAACG+AGG | + | chr8_2:57281298-57281317 | None:intergenic | 45.0% | |
| CAGCAGCAATCCTCATTACT+TGG | - | chr8_2:57281361-57281380 | Msa1256960:intron | 45.0% | |
| CTACAACTTATCGCAGGACA+AGG | + | chr8_2:57281459-57281478 | None:intergenic | 45.0% | |
| CTTAAAGTCAGAGGTCCACT+CGG | + | chr8_2:57281861-57281880 | None:intergenic | 45.0% | |
| ATACCAGAAAACTGGAAGGC+TGG | - | chr8_2:57281936-57281955 | Msa1256960:intron | 45.0% | |
| ATCACAAGCATGTTAGGTGC+AGG | - | chr8_2:57282087-57282106 | Msa1256960:CDS | 45.0% | |
| ! | CCGTGCATGAAGTATCTGCT+AGG | + | chr8_2:57280422-57280441 | None:intergenic | 50.0% |
| TCAGCTGGTGCATGTGGATT+TGG | - | chr8_2:57280593-57280612 | Msa1256960:CDS | 50.0% | |
| TATCGAGATGGAGTTGGCTG+TGG | - | chr8_2:57280668-57280687 | Msa1256960:CDS | 50.0% | |
| TTAGCCAACGAGCCTTCAGT+GGG | - | chr8_2:57280963-57280982 | Msa1256960:intron | 50.0% | |
| TGGGTAGCTACATGAAACCC+TGG | + | chr8_2:57281309-57281328 | None:intergenic | 50.0% | |
| CGAGTGGACCTCTGACTTTA+AGG | - | chr8_2:57281859-57281878 | Msa1256960:CDS | 50.0% | |
| ! | TCTCCAGCCTTCCAGTTTTC+TGG | + | chr8_2:57281942-57281961 | None:intergenic | 50.0% |
| ! | CCGTGCATGAAGTATCTGCT+AGG | + | chr8_2:57280422-57280441 | None:intergenic | 50.0% |
| TCAGCTGGTGCATGTGGATT+TGG | - | chr8_2:57280593-57280612 | Msa1256960:CDS | 50.0% | |
| TATCGAGATGGAGTTGGCTG+TGG | - | chr8_2:57280668-57280687 | Msa1256960:CDS | 50.0% | |
| TTAGCCAACGAGCCTTCAGT+GGG | - | chr8_2:57280963-57280982 | Msa1256960:intron | 50.0% | |
| TGGGTAGCTACATGAAACCC+TGG | + | chr8_2:57281309-57281328 | None:intergenic | 50.0% | |
| CGAGTGGACCTCTGACTTTA+AGG | - | chr8_2:57281859-57281878 | Msa1256960:CDS | 50.0% | |
| ! | TCTCCAGCCTTCCAGTTTTC+TGG | + | chr8_2:57281942-57281961 | None:intergenic | 50.0% |
| ! | TTGCTCAGGCAACGGTGTCA+CGG | - | chr8_2:57280895-57280914 | Msa1256960:intron | 55.0% |
| CTTAGCCAACGAGCCTTCAG+TGG | - | chr8_2:57280962-57280981 | Msa1256960:intron | 55.0% | |
| GAGATAACGAGGAGAGGCCT+TGG | + | chr8_2:57281287-57281306 | None:intergenic | 55.0% | |
| GCCTCTCCTCGTTATCTCCA+GGG | - | chr8_2:57281289-57281308 | Msa1256960:intron | 55.0% | |
| ACCCTGGAGATAACGAGGAG+AGG | + | chr8_2:57281293-57281312 | None:intergenic | 55.0% | |
| ACTTCTACCTCTCCACCGAG+TGG | - | chr8_2:57281843-57281862 | Msa1256960:CDS | 55.0% | |
| AAAGTCAGAGGTCCACTCGG+TGG | + | chr8_2:57281858-57281877 | None:intergenic | 55.0% | |
| GCTGGAGACACGTATGACTC+AGG | - | chr8_2:57281954-57281973 | Msa1256960:intron | 55.0% | |
| ! | TTGCTCAGGCAACGGTGTCA+CGG | - | chr8_2:57280895-57280914 | Msa1256960:intron | 55.0% |
| CTTAGCCAACGAGCCTTCAG+TGG | - | chr8_2:57280962-57280981 | Msa1256960:intron | 55.0% | |
| GAGATAACGAGGAGAGGCCT+TGG | + | chr8_2:57281287-57281306 | None:intergenic | 55.0% | |
| GCCTCTCCTCGTTATCTCCA+GGG | - | chr8_2:57281289-57281308 | Msa1256960:intron | 55.0% | |
| ACCCTGGAGATAACGAGGAG+AGG | + | chr8_2:57281293-57281312 | None:intergenic | 55.0% | |
| ACTTCTACCTCTCCACCGAG+TGG | - | chr8_2:57281843-57281862 | Msa1256960:CDS | 55.0% | |
| AAAGTCAGAGGTCCACTCGG+TGG | + | chr8_2:57281858-57281877 | None:intergenic | 55.0% | |
| GCTGGAGACACGTATGACTC+AGG | - | chr8_2:57281954-57281973 | Msa1256960:intron | 55.0% | |
| ! | TGGCTGTGGCGCTTGTTACC+AGG | - | chr8_2:57280682-57280701 | Msa1256960:CDS | 60.0% |
| CCATCCCACTGAAGGCTCGT+TGG | + | chr8_2:57280970-57280989 | None:intergenic | 60.0% | |
| CCAACGAGCCTTCAGTGGGA+TGG | - | chr8_2:57280967-57280986 | Msa1256960:intron | 60.0% | |
| ! | GCTCTGAGCCATCCCACTGA+AGG | + | chr8_2:57280978-57280997 | None:intergenic | 60.0% |
| CAGTGGGATGGCTCAGAGCA+AGG | - | chr8_2:57280979-57280998 | Msa1256960:intron | 60.0% | |
| GGCCTCTCCTCGTTATCTCC+AGG | - | chr8_2:57281288-57281307 | Msa1256960:intron | 60.0% | |
| AACTGCTGTGCAGCTCTGCG+AGG | - | chr8_2:57281421-57281440 | Msa1256960:intron | 60.0% | |
| ATCGGGATCATGGCGCAGTC+TGG | - | chr8_2:57281820-57281839 | Msa1256960:intron | 60.0% | |
| ! | TGGCTGTGGCGCTTGTTACC+AGG | - | chr8_2:57280682-57280701 | Msa1256960:CDS | 60.0% |
| CCATCCCACTGAAGGCTCGT+TGG | + | chr8_2:57280970-57280989 | None:intergenic | 60.0% | |
| CCAACGAGCCTTCAGTGGGA+TGG | - | chr8_2:57280967-57280986 | Msa1256960:intron | 60.0% | |
| ! | GCTCTGAGCCATCCCACTGA+AGG | + | chr8_2:57280978-57280997 | None:intergenic | 60.0% |
| CAGTGGGATGGCTCAGAGCA+AGG | - | chr8_2:57280979-57280998 | Msa1256960:intron | 60.0% | |
| GGCCTCTCCTCGTTATCTCC+AGG | - | chr8_2:57281288-57281307 | Msa1256960:intron | 60.0% | |
| AACTGCTGTGCAGCTCTGCG+AGG | - | chr8_2:57281421-57281440 | Msa1256960:intron | 60.0% | |
| ATCGGGATCATGGCGCAGTC+TGG | - | chr8_2:57281820-57281839 | Msa1256960:intron | 60.0% | |
| ! | CAGAGGTCCACTCGGTGGAG+AGG | + | chr8_2:57281853-57281872 | None:intergenic | 65.0% |
| ! | CAGAGGTCCACTCGGTGGAG+AGG | + | chr8_2:57281853-57281872 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 57280314 | 57282229 | 57280314 | ID=Msa1256960;Name=Msa1256960 |
| chr8_2 | mRNA | 57280314 | 57282229 | 57280314 | ID=Msa1256960-mRNA-1;Parent=Msa1256960;Name=Msa1256960-mRNA-1;_AED=0.11;_eAED=0.11;_QI=49|1|1|1|1|1|5|234|254 |
| chr8_2 | exon | 57280314 | 57280751 | 57280314 | ID=Msa1256960-mRNA-1:exon:17661;Parent=Msa1256960-mRNA-1 |
| chr8_2 | exon | 57281101 | 57281233 | 57281101 | ID=Msa1256960-mRNA-1:exon:17660;Parent=Msa1256960-mRNA-1 |
| chr8_2 | exon | 57281490 | 57281671 | 57281490 | ID=Msa1256960-mRNA-1:exon:17659;Parent=Msa1256960-mRNA-1 |
| chr8_2 | exon | 57281840 | 57281946 | 57281840 | ID=Msa1256960-mRNA-1:exon:17658;Parent=Msa1256960-mRNA-1 |
| chr8_2 | exon | 57282042 | 57282229 | 57282042 | ID=Msa1256960-mRNA-1:exon:17657;Parent=Msa1256960-mRNA-1 |
| chr8_2 | five_prime_UTR | 57282181 | 57282229 | 57282181 | ID=Msa1256960-mRNA-1:five_prime_utr;Parent=Msa1256960-mRNA-1 |
| chr8_2 | CDS | 57282042 | 57282180 | 57282042 | ID=Msa1256960-mRNA-1:cds;Parent=Msa1256960-mRNA-1 |
| chr8_2 | CDS | 57281840 | 57281946 | 57281840 | ID=Msa1256960-mRNA-1:cds;Parent=Msa1256960-mRNA-1 |
| chr8_2 | CDS | 57281490 | 57281671 | 57281490 | ID=Msa1256960-mRNA-1:cds;Parent=Msa1256960-mRNA-1 |
| chr8_2 | CDS | 57281101 | 57281233 | 57281101 | ID=Msa1256960-mRNA-1:cds;Parent=Msa1256960-mRNA-1 |
| chr8_2 | CDS | 57280548 | 57280751 | 57280548 | ID=Msa1256960-mRNA-1:cds;Parent=Msa1256960-mRNA-1 |
| chr8_2 | three_prime_UTR | 57280314 | 57280547 | 57280314 | ID=Msa1256960-mRNA-1:three_prime_utr;Parent=Msa1256960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
