AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1206300

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1206300 MtrunA17_Chr4g0055391 92.661 327 23 1 1 326 1 327 0.0 582
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1206300 AT5G47090.1 55.911 313 117 3 14 326 19 310 7.82e-106 312
Msa1206300 AT5G47090.2 55.911 313 117 3 14 326 19 310 7.82e-106 312

Find 122 sgRNAs with CRISPR-Local

Find 441 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAATAGGAGGAGGGCTTATT+TGG 0.186213 8_1:-63256920 Msa1206300:CDS
GCCATTACAAGCAAAATAAA+TGG 0.217003 8_1:-63252308 Msa1206300:three_prime_UTR
TGAGTATGTTGGGAAGTTTC+AGG 0.226641 8_1:-63256827 Msa1206300:CDS
CACTCGATCTCTTGTTGATT+TGG 0.253650 8_1:-63252484 Msa1206300:three_prime_UTR
AAAATAAATGGATGTTGTTT+TGG 0.276543 8_1:-63252296 Msa1206300:three_prime_UTR
ATTACCAATCCACTCGCTTC+TGG 0.278878 8_1:+63256684 None:intergenic
GTCCCCAGTTCTCCCCAATT+TGG 0.281149 8_1:+63252508 None:intergenic
TTTCCCAAGTTTCCCAAATT+GGG 0.312227 8_1:-63252521 Msa1206300:three_prime_UTR
CTATACTGTACTTAAATTAA+CGG 0.317299 8_1:-63252592 Msa1206300:three_prime_UTR
ATGCAGCAGAAGTTTCTATT+AGG 0.331657 8_1:-63252806 Msa1206300:CDS
TTTCCCAAATTGGGGAGAAC+TGG 0.339198 8_1:-63252512 Msa1206300:three_prime_UTR
TCCCCAGTTCTCCCCAATTT+GGG 0.345044 8_1:+63252509 None:intergenic
TCTCTCTTCTGCATCAATAT+TGG 0.350041 8_1:+63252709 None:intergenic
CTCCAACTCTTCTGAAGTTA+AGG 0.352124 8_1:+63252856 None:intergenic
GGCTTATTTGGATAAGTTGA+TGG 0.354956 8_1:-63256908 Msa1206300:CDS
TACAGTATAGATTTGAAGAT+TGG 0.356169 8_1:+63252605 None:intergenic
GGAAGAAGAGGAAGAGGAGG+AGG 0.356366 8_1:-63256644 Msa1206300:CDS
AGAAGAGGAAGAGGAGGAGG+AGG 0.356540 8_1:-63256641 Msa1206300:CDS
TATCAAATCTAGAGAATCTA+TGG 0.357891 8_1:-63257185 Msa1206300:CDS
AGAGGAAGAGGAGGAGGAGG+AGG 0.367681 8_1:-63256638 Msa1206300:CDS
TCTCCCCAATTTGGGAAACT+TGG 0.374237 8_1:+63252517 None:intergenic
GGAGGAGGATGGCTAGGCCG+GGG 0.377867 8_1:-63256795 Msa1206300:CDS
GATTGGAACCGTAGCGTTCT+AGG 0.381445 8_1:+63257073 None:intergenic
GGGAAGTTTCAGGATAGGTT+TGG 0.382606 8_1:-63256817 Msa1206300:CDS
TGGGAGGAGGATGGCTAGGC+CGG 0.384998 8_1:-63256797 Msa1206300:CDS
AAGATGACTACGAGGTTAAC+TGG 0.385727 8_1:-63257014 Msa1206300:CDS
TAATTCGATGGAAGTGAGAT+TGG 0.394500 8_1:+63257056 None:intergenic
TTACCAATCCACTCGCTTCT+GGG 0.400810 8_1:+63256685 None:intergenic
GGAAGTTTCAGGATAGGTTT+GGG 0.406087 8_1:-63256816 Msa1206300:CDS
TTCAGGATAGGTTTGGGAGG+AGG 0.415738 8_1:-63256810 Msa1206300:CDS
CCCTCTGCCAATGGTCGTCA+AGG 0.418155 8_1:+63252735 None:intergenic
GAGATTGTGGCTAAGATTAG+AGG 0.429365 8_1:-63256730 Msa1206300:CDS
AGAGGAGGAAGAAGAGGAAG+AGG 0.429775 8_1:-63256650 Msa1206300:CDS
GTGGAAGATGGATTTGCGTT+GGG 0.431930 8_1:+63257125 None:intergenic
GTGCCATTGTTACTTACATC+AGG 0.433173 8_1:+63252956 None:intergenic
GGGAGGAGGATGGCTAGGCC+GGG 0.441186 8_1:-63256796 Msa1206300:CDS
TTGGGAAGGGAGTGTGGCGG+TGG 0.442489 8_1:+63257143 None:intergenic
AGAGGGGAGCAGGAGAGGAT+TGG 0.449394 8_1:-63256712 Msa1206300:CDS
CTCCCCAATTTGGGAAACTT+GGG 0.451058 8_1:+63252518 None:intergenic
GGTTGGATCCTGCCTCGCTC+TGG 0.454781 8_1:+63252877 None:intergenic
TGATTCAGCCAGAGCGAGGC+AGG 0.455817 8_1:-63252885 Msa1206300:CDS
ATTTGCATTATGAGTATGTT+GGG 0.456022 8_1:-63256837 Msa1206300:CDS
GCGGTAAAAGAATTAAATAA+TGG 0.457009 8_1:-63257268 Msa1206300:exon
AGTGGAAGATGGATTTGCGT+TGG 0.459799 8_1:+63257124 None:intergenic
CCTCCCATGTCAATATTAAG+AGG 0.462218 8_1:-63252451 Msa1206300:three_prime_UTR
GAGGAGGATGGCTAGGCCGG+GGG 0.464868 8_1:-63256794 Msa1206300:CDS
GGAGGAAGAAGAGGAAGAGG+AGG 0.467961 8_1:-63256647 Msa1206300:CDS
AACCTTAACTTCAGAAGAGT+TGG 0.468520 8_1:-63252858 Msa1206300:CDS
TATTTGGATAAGTTGATGGT+TGG 0.469239 8_1:-63256904 Msa1206300:CDS
GGCTAAGATTAGAGGGGAGC+AGG 0.469678 8_1:-63256722 Msa1206300:CDS
AGATGGATTTGCGTTGGGAA+GGG 0.470800 8_1:+63257130 None:intergenic
AACTCTTCTGAAGTTAAGGT+TGG 0.471512 8_1:+63252860 None:intergenic
CGAAGTGAGCGAAGAAGCGA+AGG 0.474089 8_1:-63257226 Msa1206300:CDS
TTTGAGGAGGTGTGAGGAGG+CGG 0.475716 8_1:-63256752 Msa1206300:CDS
TTCCCAAATTGGGGAGAACT+GGG 0.475949 8_1:-63252511 Msa1206300:three_prime_UTR
CTCCTCAACTCCTCCGTCGT+CGG 0.476973 8_1:+63256961 None:intergenic
TTGGATAAGTTGATGGTTGG+TGG 0.478972 8_1:-63256901 Msa1206300:CDS
AGGCTGTGGTTGCGAAGAAT+AGG 0.481727 8_1:-63256936 Msa1206300:CDS
TATTTGCATTATGAGTATGT+TGG 0.495284 8_1:-63256838 Msa1206300:CDS
AGTGAGAAGAGAGTGGAAGA+TGG 0.496332 8_1:+63257113 None:intergenic
AAGATGGATTTGCGTTGGGA+AGG 0.513028 8_1:+63257129 None:intergenic
AACCGTAGCGTTCTAGGAAG+AGG 0.515964 8_1:+63257079 None:intergenic
GTGTGAGGAGGCGGAGATTG+TGG 0.522176 8_1:-63256743 Msa1206300:CDS
TTCGAATTCGGTTAATTCGA+TGG 0.524106 8_1:+63257044 None:intergenic
ATGAGACCCTTGACGACCAT+TGG 0.525545 8_1:-63252742 Msa1206300:CDS
TTTGCGTTGGGAAGGGAGTG+TGG 0.530414 8_1:+63257137 None:intergenic
ACATCATCTCTCACTCGAGC+TGG 0.535245 8_1:+63252926 None:intergenic
TTGTTACTTACATCAGGTTG+AGG 0.535366 8_1:+63252962 None:intergenic
AGATTAGAGGGGAGCAGGAG+AGG 0.536513 8_1:-63256717 Msa1206300:CDS
TAGATTTGAAGATTGGCAAA+CGG 0.539449 8_1:+63252612 None:intergenic
ATGTTGGGAAGTTTCAGGAT+AGG 0.539526 8_1:-63256822 Msa1206300:CDS
CTTAACTTCAGAAGAGTTGG+AGG 0.541692 8_1:-63252855 Msa1206300:CDS
TTCCCAAGTTTCCCAAATTG+GGG 0.545554 8_1:-63252520 Msa1206300:three_prime_UTR
AGAGATGATGTAACTGATAA+CGG 0.545813 8_1:-63252914 Msa1206300:CDS
TGTAAGTGAATTGATTCATC+CGG 0.545854 8_1:+63252831 None:intergenic
TATTGGCCTCCCTCTGCCAA+TGG 0.551435 8_1:+63252726 None:intergenic
GGATAGGTTTGGGAGGAGGA+TGG 0.552430 8_1:-63256806 Msa1206300:CDS
CTTCAGAAGAGTTGGAGGAC+CGG 0.555990 8_1:-63252850 Msa1206300:CDS
AGCGAGTGGATTGGTAATGA+AGG 0.556176 8_1:-63256679 Msa1206300:CDS
GATCTCTTGTTGATTTGGTG+AGG 0.563439 8_1:-63252479 Msa1206300:three_prime_UTR
GGTTTGGGAGGAGGATGGCT+AGG 0.565996 8_1:-63256801 Msa1206300:CDS
TGGTAATGAAGGACTTCAAG+AGG 0.567722 8_1:-63256668 Msa1206300:CDS
CCTCTGCCAATGGTCGTCAA+GGG 0.570477 8_1:+63252736 None:intergenic
GTCCGACGACGGAGGAGTTG+AGG 0.571986 8_1:-63256963 Msa1206300:CDS
GGAGTTGAGGAGGAAGGCTG+TGG 0.573275 8_1:-63256950 Msa1206300:CDS
AAATTTGCATGTGCTATAGC+TGG 0.577477 8_1:+63252240 None:intergenic
AGATTGTGGCTAAGATTAGA+GGG 0.578298 8_1:-63256729 Msa1206300:CDS
CTGTGGTTGCGAAGAATAGG+AGG 0.579748 8_1:-63256933 Msa1206300:CDS
CCCTTGACGACCATTGGCAG+AGG 0.580251 8_1:-63252736 Msa1206300:CDS
ACTTCAAGAGGAGGAAGAAG+AGG 0.587570 8_1:-63256656 Msa1206300:CDS
ACCGTAGCGTTCTAGGAAGA+GGG 0.588216 8_1:+63257080 None:intergenic
TGCACCTCTTAATATTGACA+TGG 0.588716 8_1:+63252447 None:intergenic
CGACGACGGAGGAGTTGAGG+AGG 0.594340 8_1:-63256960 Msa1206300:CDS
TAGCGTTCTAGGAAGAGGGA+TGG 0.596251 8_1:+63257084 None:intergenic
CAAATCAACAAGAGATCGAG+TGG 0.600743 8_1:+63252485 None:intergenic
GTATCAGACCACCTCTCCCC+CGG 0.601397 8_1:+63256778 None:intergenic
TCCCTCTTCCTAGAACGCTA+CGG 0.601725 8_1:-63257081 Msa1206300:CDS
ACTCAGTAGTAACTTGCTGT+TGG 0.603963 8_1:-63252555 Msa1206300:three_prime_UTR
TGGTTGCGAAGAATAGGAGG+AGG 0.610374 8_1:-63256930 Msa1206300:CDS
CAACCTGATGTAAGTAACAA+TGG 0.612554 8_1:-63252959 Msa1206300:CDS
TGACGACCATTGGCAGAGGG+AGG 0.614328 8_1:-63252732 Msa1206300:CDS
AGGTTAACTGGCACGTGACG+CGG 0.623803 8_1:-63257002 Msa1206300:CDS
AGCGTTCTAGGAAGAGGGAT+GGG 0.626163 8_1:+63257085 None:intergenic
GGTCGCGAGTGAGAAGAGAG+TGG 0.633188 8_1:+63257106 None:intergenic
CCTTGACGACCATTGGCAGA+GGG 0.641904 8_1:-63252735 Msa1206300:CDS
GTGCCCAGAAGCGAGTGGAT+TGG 0.643717 8_1:-63256688 Msa1206300:CDS
GACGGAGGAGTTGAGGAGGA+AGG 0.645151 8_1:-63256956 Msa1206300:CDS
GCGTTGGGAAGGGAGTGTGG+CGG 0.647521 8_1:+63257140 None:intergenic
GCACCTCTTAATATTGACAT+GGG 0.647641 8_1:+63252448 None:intergenic
AGTTTCAGGATAGGTTTGGG+AGG 0.649952 8_1:-63256813 Msa1206300:CDS
GGAGGCGATGAGAGAACGTG+AGG 0.653428 8_1:-63256863 Msa1206300:CDS
CATCTGATTCAGCCAGAGCG+AGG 0.656335 8_1:-63252889 Msa1206300:CDS
CCTCTTAATATTGACATGGG+AGG 0.662291 8_1:+63252451 None:intergenic
CTTGTTGAGTCCGACGACGG+AGG 0.670780 8_1:-63256971 Msa1206300:CDS
AAGCTTGTTGAGTCCGACGA+CGG 0.671431 8_1:-63256974 Msa1206300:CDS
TTGGTGTGCCCAGAAGCGAG+TGG 0.671616 8_1:-63256693 Msa1206300:CDS
TCCCAAATTGGGGAGAACTG+GGG 0.679752 8_1:-63252510 Msa1206300:three_prime_UTR
TAATGAAGGACTTCAAGAGG+AGG 0.688131 8_1:-63256665 Msa1206300:CDS
GGTTGCGAAGAATAGGAGGA+GGG 0.704365 8_1:-63256929 Msa1206300:CDS
AAATCAACAAGAGATCGAGT+GGG 0.712006 8_1:+63252486 None:intergenic
GATTGTGGCTAAGATTAGAG+GGG 0.720646 8_1:-63256728 Msa1206300:CDS
AACCCTAAAAGATGACTACG+AGG 0.756240 8_1:-63257022 Msa1206300:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTGTAGAATTTATATAAT+TGG - chr8_1:63253667-63253686 Msa1206300:intron 10.0%
!! TTGAATATAATCAAATGTAT+CGG - chr8_1:63253069-63253088 Msa1206300:intron 15.0%
!! TAGAATTTATATAATTGGTT+AGG - chr8_1:63253672-63253691 Msa1206300:intron 15.0%
!! AACAATTTGATTAAGAAAAT+AGG - chr8_1:63255013-63255032 Msa1206300:intron 15.0%
!!! AAGATTTTATTTTTCATGCT+AGG - chr8_1:63253172-63253191 Msa1206300:intron 20.0%
!!! TCTTATTTTGTTGCAAATAA+GGG + chr8_1:63253563-63253582 None:intergenic 20.0%
!!! TTCTTATTTTGTTGCAAATA+AGG + chr8_1:63253564-63253583 None:intergenic 20.0%
!! TTATTTGCAACAAAATAAGA+AGG - chr8_1:63253563-63253582 Msa1206300:intron 20.0%
!! AATTTATATAATTGGTTAGG+TGG - chr8_1:63253675-63253694 Msa1206300:intron 20.0%
!! AGATTCATATATGTTAATCT+GGG - chr8_1:63253760-63253779 Msa1206300:intron 20.0%
!! ATAAGAACGAATAAAACTAA+TGG + chr8_1:63253934-63253953 None:intergenic 20.0%
!! ATAACAAGTTCAAAATTGAT+AGG + chr8_1:63254699-63254718 None:intergenic 20.0%
!!! AACTTGTTATGTTCTATTTT+CGG - chr8_1:63254709-63254728 Msa1206300:intron 20.0%
!! ATTAAGAAAATAGGAAAGAT+AGG - chr8_1:63255022-63255041 Msa1206300:intron 20.0%
!! TACTATACTCTTGATATAAA+AGG + chr8_1:63255687-63255706 None:intergenic 20.0%
!!! TTTTAATCTTGTATCATACA+TGG - chr8_1:63256313-63256332 Msa1206300:intron 20.0%
!! CTATACTGTACTTAAATTAA+CGG - chr8_1:63256918-63256937 Msa1206300:CDS 20.0%
!!! AAAATAAATGGATGTTGTTT+TGG - chr8_1:63257214-63257233 Msa1206300:CDS 20.0%
!!! GTTGTTTTGGATTAAATTAA+TGG - chr8_1:63257227-63257246 Msa1206300:CDS 20.0%
! GCGGTAAAAGAATTAAATAA+TGG - chr8_1:63252242-63252261 Msa1206300:three_prime_UTR 25.0%
! TATCAAATCTAGAGAATCTA+TGG - chr8_1:63252325-63252344 Msa1206300:three_prime_UTR 25.0%
! TATTTGCATTATGAGTATGT+TGG - chr8_1:63252672-63252691 Msa1206300:exon 25.0%
! ATTTGCATTATGAGTATGTT+GGG - chr8_1:63252673-63252692 Msa1206300:exon 25.0%
! GTAACACAAATACATATCAA+AGG + chr8_1:63253124-63253143 None:intergenic 25.0%
!!! TAGCCATATTTTAACGTATA+GGG - chr8_1:63253230-63253249 Msa1206300:intron 25.0%
! TTTGGATAAACAACTTAGTT+AGG - chr8_1:63253315-63253334 Msa1206300:intron 25.0%
!!! GATTAGCTTAAATAGTTGAA+GGG - chr8_1:63253717-63253736 Msa1206300:intron 25.0%
! GAGATTCATATATGTTAATC+TGG - chr8_1:63253759-63253778 Msa1206300:intron 25.0%
! TAATGGAAGATAGAAAGTAA+AGG + chr8_1:63253917-63253936 None:intergenic 25.0%
! AAATAAAAAATTCAGAAGGC+CGG + chr8_1:63253977-63253996 None:intergenic 25.0%
!!! GCCTTCTGAATTTTTTATTT+GGG - chr8_1:63253977-63253996 Msa1206300:intron 25.0%
!!! CCTTCTGAATTTTTTATTTG+GGG - chr8_1:63253978-63253997 Msa1206300:intron 25.0%
!!! GAATTTTTTATTTGGGGATA+TGG - chr8_1:63253984-63254003 Msa1206300:intron 25.0%
!! TTTACGCAAACAATTTTGTA+AGG + chr8_1:63254155-63254174 None:intergenic 25.0%
! CATTAATCAATATTGTTGAC+CGG + chr8_1:63254222-63254241 None:intergenic 25.0%
!!! TCAGCTATTTTCATTTTTGT+GGG + chr8_1:63254872-63254891 None:intergenic 25.0%
! TTCTATTCTACTCAATTCTT+GGG + chr8_1:63254991-63255010 None:intergenic 25.0%
! TTTCTATTCTACTCAATTCT+TGG + chr8_1:63254992-63255011 None:intergenic 25.0%
!! ATGTATAGATAGGAAGATTT+TGG + chr8_1:63255142-63255161 None:intergenic 25.0%
! ATCTTCCTATCTATACATAA+TGG - chr8_1:63255144-63255163 Msa1206300:intron 25.0%
! TAGGGAAGTTATTAGTTAAT+GGG + chr8_1:63255181-63255200 None:intergenic 25.0%
! TTAGGGAAGTTATTAGTTAA+TGG + chr8_1:63255182-63255201 None:intergenic 25.0%
! TAGAGTAGTTAAAGTTGTTA+AGG + chr8_1:63255211-63255230 None:intergenic 25.0%
! TTATTCTATAGAGAAATGCT+AGG - chr8_1:63255237-63255256 Msa1206300:intron 25.0%
! ATTTCGACTAATAAAAGAGT+GGG - chr8_1:63255369-63255388 Msa1206300:intron 25.0%
! AGTGTTAGGATATAGAATAA+GGG + chr8_1:63255431-63255450 None:intergenic 25.0%
! TAGTGTTAGGATATAGAATA+AGG + chr8_1:63255432-63255451 None:intergenic 25.0%
! TATTCTATATCCTAACACTA+TGG - chr8_1:63255432-63255451 Msa1206300:intron 25.0%
! TATACTCTTGATATAAAAGG+TGG + chr8_1:63255684-63255703 None:intergenic 25.0%
! AGTATAGTAAATGACAAGAA+GGG - chr8_1:63255698-63255717 Msa1206300:intron 25.0%
! GTTTGATTAAATAGTAGAAG+AGG - chr8_1:63256041-63256060 Msa1206300:intron 25.0%
! ATCATGCAGTATATTCTAAA+TGG + chr8_1:63256256-63256275 None:intergenic 25.0%
! ATGACATGGTAAGAATAATA+TGG - chr8_1:63256344-63256363 Msa1206300:intron 25.0%
!! GGGATTTCAAGTATAATTAA+TGG - chr8_1:63256453-63256472 Msa1206300:intron 25.0%
! TACAGTATAGATTTGAAGAT+TGG + chr8_1:63256908-63256927 None:intergenic 25.0%
!! AAACGTAAGTTTACAGTTTT+TGG + chr8_1:63257134-63257153 None:intergenic 25.0%
!!! TCCATTTATTTTGCTTGTAA+TGG + chr8_1:63257206-63257225 None:intergenic 25.0%
!!! ATCTTTTAGGGTTTCGAATT+CGG + chr8_1:63252481-63252500 None:intergenic 30.0%
!! TATTTGGATAAGTTGATGGT+TGG - chr8_1:63252606-63252625 Msa1206300:three_prime_UTR 30.0%
! GCTAGGTCAATTATTCATTT+TGG - chr8_1:63253189-63253208 Msa1206300:intron 30.0%
!!! GTAGCCATATTTTAACGTAT+AGG - chr8_1:63253229-63253248 Msa1206300:intron 30.0%
TCTCCCTATACGTTAAAATA+TGG + chr8_1:63253236-63253255 None:intergenic 30.0%
ACTAAGTTGTTTATCCAAAC+AGG + chr8_1:63253314-63253333 None:intergenic 30.0%
!! TACCTATAAGCTGTTTTCTT+AGG - chr8_1:63253418-63253437 Msa1206300:intron 30.0%
CCATAGGCATAAAGATTAAT+TGG + chr8_1:63253600-63253619 None:intergenic 30.0%
CCAATTAATCTTTATGCCTA+TGG - chr8_1:63253597-63253616 Msa1206300:intron 30.0%
!! GGATTAGCTTAAATAGTTGA+AGG - chr8_1:63253716-63253735 Msa1206300:intron 30.0%
TGAATATTGCAAAACATGAG+CGG + chr8_1:63253880-63253899 None:intergenic 30.0%
!!! GGCCTTCTGAATTTTTTATT+TGG - chr8_1:63253976-63253995 Msa1206300:intron 30.0%
CCCCAAATAAAAAATTCAGA+AGG + chr8_1:63253981-63254000 None:intergenic 30.0%
!! TTTTTATTTGGGGATATGGA+CGG - chr8_1:63253988-63254007 Msa1206300:intron 30.0%
AGTTGAACTCATGTAGAAAA+TGG - chr8_1:63254032-63254051 Msa1206300:intron 30.0%
! AAGTTGGTCAATTCTATAAG+TGG + chr8_1:63254100-63254119 None:intergenic 30.0%
ATTGACCAACTTTACTATTC+TGG - chr8_1:63254108-63254127 Msa1206300:intron 30.0%
CAAAATTGTTTGCGTAAACT+CGG - chr8_1:63254157-63254176 Msa1206300:intron 30.0%
AAAATTGTTTGCGTAAACTC+GGG - chr8_1:63254158-63254177 Msa1206300:intron 30.0%
! ATCACTCAATTGCTGTATTT+TGG + chr8_1:63254284-63254303 None:intergenic 30.0%
TTTCTTGTTGCAAATTGCAA+TGG - chr8_1:63254317-63254336 Msa1206300:intron 30.0%
AGATAGGTTTCAGTTAATCA+TGG + chr8_1:63254375-63254394 None:intergenic 30.0%
! TTTTACTAAAGAGTGAAGGA+TGG + chr8_1:63254441-63254460 None:intergenic 30.0%
! CAAGTTTTACTAAAGAGTGA+AGG + chr8_1:63254445-63254464 None:intergenic 30.0%
TTGAATTTACCATAGAGTGA+AGG + chr8_1:63254654-63254673 None:intergenic 30.0%
GGAATATGTGCAAGAATTTA+AGG - chr8_1:63254750-63254769 Msa1206300:intron 30.0%
TAAACAGAATGTGAAGAGTA+GGG - chr8_1:63254832-63254851 Msa1206300:intron 30.0%
!! TTTCATTTTTGTGGGATTAC+AGG + chr8_1:63254864-63254883 None:intergenic 30.0%
!! CTCAGCTATTTTCATTTTTG+TGG + chr8_1:63254873-63254892 None:intergenic 30.0%
CACAAAAATGAAAATAGCTG+AGG - chr8_1:63254871-63254890 Msa1206300:intron 30.0%
AGGTACTAAATTTAGAAGAG+CGG - chr8_1:63254891-63254910 Msa1206300:intron 30.0%
AATTTCATGCACTATGTGTT+AGG - chr8_1:63254963-63254982 Msa1206300:intron 30.0%
GTAGTGATTCTATTGGAAAA+GGG + chr8_1:63255075-63255094 None:intergenic 30.0%
AGTAGTGATTCTATTGGAAA+AGG + chr8_1:63255076-63255095 None:intergenic 30.0%
GAATAGAGTAGTGATTCTAT+TGG + chr8_1:63255082-63255101 None:intergenic 30.0%
TAGGACCATTATGTATAGAT+AGG + chr8_1:63255152-63255171 None:intergenic 30.0%
AGGGAAGTTATTAGTTAATG+GGG + chr8_1:63255180-63255199 None:intergenic 30.0%
GATTTCGACTAATAAAAGAG+TGG - chr8_1:63255368-63255387 Msa1206300:intron 30.0%
GTGTTAGGATATAGAATAAG+GGG + chr8_1:63255430-63255449 None:intergenic 30.0%
AGATACAGATTAGTATCTGA+AGG - chr8_1:63255483-63255502 Msa1206300:intron 30.0%
GATACAGATTAGTATCTGAA+GGG - chr8_1:63255484-63255503 Msa1206300:intron 30.0%
ATACAGATTAGTATCTGAAG+GGG - chr8_1:63255485-63255504 Msa1206300:intron 30.0%
GAGTATAGTAAATGACAAGA+AGG - chr8_1:63255697-63255716 Msa1206300:intron 30.0%
GTATAGTAAATGACAAGAAG+GGG - chr8_1:63255699-63255718 Msa1206300:intron 30.0%
TATAGTAAATGACAAGAAGG+GGG - chr8_1:63255700-63255719 Msa1206300:intron 30.0%
GTTATAGATTTAGTTGTCAC+TGG - chr8_1:63255976-63255995 Msa1206300:intron 30.0%
TTGGAAACAAAGAAAACCAT+TGG - chr8_1:63256099-63256118 Msa1206300:intron 30.0%
AAACAAAGAAAACCATTGGA+AGG - chr8_1:63256103-63256122 Msa1206300:intron 30.0%
TGTAAACAATGAACAGTTTG+AGG - chr8_1:63256371-63256390 Msa1206300:intron 30.0%
GTAAACAATGAACAGTTTGA+GGG - chr8_1:63256372-63256391 Msa1206300:intron 30.0%
! ATCCACAGTTTCTTATCTTT+TGG - chr8_1:63256424-63256443 Msa1206300:intron 30.0%
! TCCACAGTTTCTTATCTTTT+GGG - chr8_1:63256425-63256444 Msa1206300:intron 30.0%
! TTTCTTATCTTTTGGGCTTT+GGG - chr8_1:63256432-63256451 Msa1206300:intron 30.0%
TGGTATAACCATATGATTTG+TGG - chr8_1:63256473-63256492 Msa1206300:intron 30.0%
AGAGATGATGTAACTGATAA+CGG - chr8_1:63256596-63256615 Msa1206300:CDS 30.0%
! TGTAAGTGAATTGATTCATC+CGG + chr8_1:63256682-63256701 None:intergenic 30.0%
TAGATTTGAAGATTGGCAAA+CGG + chr8_1:63256901-63256920 None:intergenic 30.0%
GCCATTACAAGCAAAATAAA+TGG - chr8_1:63257202-63257221 Msa1206300:CDS 30.0%
TAATTCGATGGAAGTGAGAT+TGG + chr8_1:63252457-63252476 None:intergenic 35.0%
TTCGAATTCGGTTAATTCGA+TGG + chr8_1:63252469-63252488 None:intergenic 35.0%
! AACCTCGTAGTCATCTTTTA+GGG + chr8_1:63252493-63252512 None:intergenic 35.0%
! TAACCTCGTAGTCATCTTTT+AGG + chr8_1:63252494-63252513 None:intergenic 35.0%
! GGCTTATTTGGATAAGTTGA+TGG - chr8_1:63252602-63252621 Msa1206300:three_prime_UTR 35.0%
AGATTGTGGCTAAGATTAGA+GGG - chr8_1:63252781-63252800 Msa1206300:CDS 35.0%
!! CAAATGTATCGGTGTTATGT+TGG - chr8_1:63253080-63253099 Msa1206300:intron 35.0%
TTAACGTATAGGGAGAAAAC+AGG - chr8_1:63253240-63253259 Msa1206300:intron 35.0%
ACAGGAAGAGAACAATTCAA+TGG - chr8_1:63253258-63253277 Msa1206300:intron 35.0%
GTTGATCAATTGCTAGACTT+AGG - chr8_1:63253287-63253306 Msa1206300:intron 35.0%
AGCCTAAGAAAACAGCTTAT+AGG + chr8_1:63253423-63253442 None:intergenic 35.0%
AAATAATTGCTGCAAGCCAT+AGG + chr8_1:63253616-63253635 None:intergenic 35.0%
TATAATTGGTTAGGTGGTTG+TGG - chr8_1:63253681-63253700 Msa1206300:intron 35.0%
GAATATTGCAAAACATGAGC+GGG + chr8_1:63253879-63253898 None:intergenic 35.0%
TAGAAAATGGCCTTTGATCA+TGG - chr8_1:63254045-63254064 Msa1206300:intron 35.0%
AGAAAATGGCCTTTGATCAT+GGG - chr8_1:63254046-63254065 Msa1206300:intron 35.0%
GATAGCCAGAATAGTAAAGT+TGG + chr8_1:63254116-63254135 None:intergenic 35.0%
TGCATAGAATTGTGAGTTTG+AGG - chr8_1:63254187-63254206 Msa1206300:intron 35.0%
GATTAATGATTATTCACCCC+AGG - chr8_1:63254234-63254253 Msa1206300:intron 35.0%
GGTTTCAGTTAATCATGGTT+GGG + chr8_1:63254370-63254389 None:intergenic 35.0%
AGGTTTCAGTTAATCATGGT+TGG + chr8_1:63254371-63254390 None:intergenic 35.0%
GAAAAGATTTGCAGATCACA+AGG + chr8_1:63254470-63254489 None:intergenic 35.0%
TTTACCATAGAGTGAAGGAT+GGG + chr8_1:63254649-63254668 None:intergenic 35.0%
ATTTACCATAGAGTGAAGGA+TGG + chr8_1:63254650-63254669 None:intergenic 35.0%
GTAAACAGAATGTGAAGAGT+AGG - chr8_1:63254831-63254850 Msa1206300:intron 35.0%
TACTAAATTTAGAAGAGCGG+TGG - chr8_1:63254894-63254913 Msa1206300:intron 35.0%
!!! GAAGATTTTGGAGTTAGAGA+GGG + chr8_1:63255130-63255149 None:intergenic 35.0%
ATTAGTTAATGGGGGTAGTT+AGG + chr8_1:63255171-63255190 None:intergenic 35.0%
GGGAAGTTATTAGTTAATGG+GGG + chr8_1:63255179-63255198 None:intergenic 35.0%
AGTTGTTAAGGAGCTAGTTA+GGG + chr8_1:63255199-63255218 None:intergenic 35.0%
AAGTTGTTAAGGAGCTAGTT+AGG + chr8_1:63255200-63255219 None:intergenic 35.0%
GAAATGAGTACCACATAAAG+TGG + chr8_1:63255328-63255347 None:intergenic 35.0%
TGGTACTCATTTCAAAAGTG+TGG - chr8_1:63255335-63255354 Msa1206300:intron 35.0%
TATTAGTCGAAATCCATGTG+AGG + chr8_1:63255362-63255381 None:intergenic 35.0%
TATATCCTAACACTATGGAG+TGG - chr8_1:63255437-63255456 Msa1206300:intron 35.0%
! AGAATGCGAGGCTTTATATT+GGG + chr8_1:63255543-63255562 None:intergenic 35.0%
! AAGAATGCGAGGCTTTATAT+TGG + chr8_1:63255544-63255563 None:intergenic 35.0%
AATATAAAGCCTCGCATTCT+TGG - chr8_1:63255543-63255562 Msa1206300:intron 35.0%
ATAGTAAATGACAAGAAGGG+GGG - chr8_1:63255701-63255720 Msa1206300:intron 35.0%
AGAAGATCTACAAGTGAATG+AGG - chr8_1:63255818-63255837 Msa1206300:intron 35.0%
AGTTGAGAATATCTAGAGAC+AGG + chr8_1:63256225-63256244 None:intergenic 35.0%
! GTTTCTTATCTTTTGGGCTT+TGG - chr8_1:63256431-63256450 Msa1206300:intron 35.0%
! TTCTTATCTTTTGGGCTTTG+GGG - chr8_1:63256433-63256452 Msa1206300:intron 35.0%
TGATCAGTCCACAAATCATA+TGG + chr8_1:63256484-63256503 None:intergenic 35.0%
!!! TTCCTTTTTTTTTCCGCTAC+TGG - chr8_1:63256513-63256532 Msa1206300:intron 35.0%
! TTGTTACTTACATCAGGTTG+AGG + chr8_1:63256551-63256570 None:intergenic 35.0%
CAACCTGATGTAAGTAACAA+TGG - chr8_1:63256551-63256570 Msa1206300:intron 35.0%
!! AACTCTTCTGAAGTTAAGGT+TGG + chr8_1:63256653-63256672 None:intergenic 35.0%
AACCTTAACTTCAGAAGAGT+TGG - chr8_1:63256652-63256671 Msa1206300:CDS 35.0%
ATGCAGCAGAAGTTTCTATT+AGG - chr8_1:63256704-63256723 Msa1206300:CDS 35.0%
TCTCTCTTCTGCATCAATAT+TGG + chr8_1:63256804-63256823 None:intergenic 35.0%
! TTTTCCCAAGTTTCCCAAAT+TGG - chr8_1:63256988-63257007 Msa1206300:CDS 35.0%
TTTCCCAAGTTTCCCAAATT+GGG - chr8_1:63256989-63257008 Msa1206300:CDS 35.0%
AAATCAACAAGAGATCGAGT+GGG + chr8_1:63257027-63257046 None:intergenic 35.0%
GCACCTCTTAATATTGACAT+GGG + chr8_1:63257065-63257084 None:intergenic 35.0%
TGCACCTCTTAATATTGACA+TGG + chr8_1:63257066-63257085 None:intergenic 35.0%
AACCCTAAAAGATGACTACG+AGG - chr8_1:63252488-63252507 Msa1206300:three_prime_UTR 40.0%
AAGATGACTACGAGGTTAAC+TGG - chr8_1:63252496-63252515 Msa1206300:three_prime_UTR 40.0%
!! TTGGATAAGTTGATGGTTGG+TGG - chr8_1:63252609-63252628 Msa1206300:three_prime_UTR 40.0%
!!! GGTTGGTGGAGTGTATTTTT+CGG - chr8_1:63252623-63252642 Msa1206300:three_prime_UTR 40.0%
TGAGTATGTTGGGAAGTTTC+AGG - chr8_1:63252683-63252702 Msa1206300:exon 40.0%
ATGTTGGGAAGTTTCAGGAT+AGG - chr8_1:63252688-63252707 Msa1206300:exon 40.0%
GGAAGTTTCAGGATAGGTTT+GGG - chr8_1:63252694-63252713 Msa1206300:CDS 40.0%
GAGATTGTGGCTAAGATTAG+AGG - chr8_1:63252780-63252799 Msa1206300:CDS 40.0%
GATTGTGGCTAAGATTAGAG+GGG - chr8_1:63252782-63252801 Msa1206300:CDS 40.0%
! TGGTAATGAAGGACTTCAAG+AGG - chr8_1:63252842-63252861 Msa1206300:CDS 40.0%
TAATGAAGGACTTCAAGAGG+AGG - chr8_1:63252845-63252864 Msa1206300:CDS 40.0%
TGTTGAAAAAGACGAGACTG+TGG - chr8_1:63252914-63252933 Msa1206300:CDS 40.0%
ATCTACTCGCATAAGCACTT+GGG + chr8_1:63253514-63253533 None:intergenic 40.0%
TATCTACTCGCATAAGCACT+TGG + chr8_1:63253515-63253534 None:intergenic 40.0%
! GTTGCAAATAAGGGCTTGTT+TGG + chr8_1:63253554-63253573 None:intergenic 40.0%
TTGAAGGGTTAGAAACCAGA+AGG - chr8_1:63253732-63253751 Msa1206300:intron 40.0%
TGAAGGGTTAGAAACCAGAA+GGG - chr8_1:63253733-63253752 Msa1206300:intron 40.0%
AACATGAGCGGGAAAAAAAG+AGG + chr8_1:63253868-63253887 None:intergenic 40.0%
TATGGACGGAGTTAAAACCT+TGG - chr8_1:63254002-63254021 Msa1206300:intron 40.0%
ATGGACGGAGTTAAAACCTT+GGG - chr8_1:63254003-63254022 Msa1206300:intron 40.0%
CAATGGTATCCCATGATCAA+AGG + chr8_1:63254058-63254077 None:intergenic 40.0%
TCACTCTTGATCTTAGGCAA+TGG + chr8_1:63254075-63254094 None:intergenic 40.0%
GAGTTTGAGGACAATTGAAC+CGG - chr8_1:63254200-63254219 Msa1206300:intron 40.0%
TAATGATTATTCACCCCAGG+AGG - chr8_1:63254237-63254256 Msa1206300:intron 40.0%
!! TAGAAAGCGTTAAACCTCCT+GGG + chr8_1:63254254-63254273 None:intergenic 40.0%
!! TTAGAAAGCGTTAAACCTCC+TGG + chr8_1:63254255-63254274 None:intergenic 40.0%
! AATCAACACATTGGCCTGTT+GGG + chr8_1:63254344-63254363 None:intergenic 40.0%
GTTGGGTTCAATCAACACAT+TGG + chr8_1:63254353-63254372 None:intergenic 40.0%
ACTAAAGAGTGAAGGATGGT+GGG + chr8_1:63254437-63254456 None:intergenic 40.0%
TACTAAAGAGTGAAGGATGG+TGG + chr8_1:63254438-63254457 None:intergenic 40.0%
TTCTCGTTGCAAGTTTGCAA+TGG - chr8_1:63254526-63254545 Msa1206300:intron 40.0%
GAATGAACCCAACCAAGATT+AGG - chr8_1:63254569-63254588 Msa1206300:intron 40.0%
GGTTTCACCTAATCTTGGTT+GGG + chr8_1:63254579-63254598 None:intergenic 40.0%
AGGTTTCACCTAATCTTGGT+TGG + chr8_1:63254580-63254599 None:intergenic 40.0%
ACCAAGATTAGGTGAAACCT+AGG - chr8_1:63254580-63254599 Msa1206300:intron 40.0%
ACCTAGGTTTCACCTAATCT+TGG + chr8_1:63254584-63254603 None:intergenic 40.0%
TTACCATAGAGTGAAGGATG+GGG + chr8_1:63254648-63254667 None:intergenic 40.0%
TATTCCTCCACTGTAGTTGA+TGG + chr8_1:63254736-63254755 None:intergenic 40.0%
! GCAAGAATTTAAGGTCCAAG+TGG - chr8_1:63254759-63254778 Msa1206300:intron 40.0%
GTGACTAGGAGTAAGTTACT+GGG - chr8_1:63254793-63254812 Msa1206300:intron 40.0%
TGACTAGGAGTAAGTTACTG+GGG - chr8_1:63254794-63254813 Msa1206300:intron 40.0%
! TAAGTTACTGGGGTATTTCC+TGG - chr8_1:63254804-63254823 Msa1206300:intron 40.0%
! AAGTTACTGGGGTATTTCCT+GGG - chr8_1:63254805-63254824 Msa1206300:intron 40.0%
AAAGAGAACTCTCCTCCAAA+GGG - chr8_1:63255045-63255064 Msa1206300:intron 40.0%
!!! GGAAGATTTTGGAGTTAGAG+AGG + chr8_1:63255131-63255150 None:intergenic 40.0%
TCAAACACCCACTCTACTAT+TGG - chr8_1:63255281-63255300 Msa1206300:intron 40.0%
CAAACACCCACTCTACTATT+GGG - chr8_1:63255282-63255301 Msa1206300:intron 40.0%
GTTTCACCCAATAGTAGAGT+GGG + chr8_1:63255291-63255310 None:intergenic 40.0%
!! ATAGAATAAGGGGAGTGTTC+TGG + chr8_1:63255420-63255439 None:intergenic 40.0%
CTGAATAATGCTTGAAACCC+TGG + chr8_1:63255465-63255484 None:intergenic 40.0%
AAACCACGAAACAGATCCAA+TGG + chr8_1:63255513-63255532 None:intergenic 40.0%
ATCTGTCTTAGTAGTAGGGT+TGG + chr8_1:63255591-63255610 None:intergenic 40.0%
GTGCATCTGTCTTAGTAGTA+GGG + chr8_1:63255595-63255614 None:intergenic 40.0%
TGTGCATCTGTCTTAGTAGT+AGG + chr8_1:63255596-63255615 None:intergenic 40.0%
ACTACTAAGACAGATGCACA+AGG - chr8_1:63255596-63255615 Msa1206300:intron 40.0%
TTCTAGACAACAGTGGTATC+AGG + chr8_1:63255770-63255789 None:intergenic 40.0%
! CTCTCTTTTCTAGACAACAG+TGG + chr8_1:63255777-63255796 None:intergenic 40.0%
GTTGTCTAGAAAAGAGAGCA+TGG - chr8_1:63255779-63255798 Msa1206300:intron 40.0%
AGTACAGATTCTAATGCCGA+GGG - chr8_1:63255894-63255913 Msa1206300:intron 40.0%
TTGGCAATTGAGAAATCCCT+CGG + chr8_1:63255913-63255932 None:intergenic 40.0%
ATTGCCAAGCTGGAATTTCA+AGG - chr8_1:63255925-63255944 Msa1206300:intron 40.0%
TTGCCAAGCTGGAATTTCAA+GGG - chr8_1:63255926-63255945 Msa1206300:intron 40.0%
AGAAGAGGTTGAACCTAGAA+TGG - chr8_1:63256056-63256075 Msa1206300:intron 40.0%
!! GGGGGATTCAGATTTAGTTT+TGG - chr8_1:63256080-63256099 Msa1206300:intron 40.0%
ACTGCAACTACAAACAGAGA+AGG + chr8_1:63256139-63256158 None:intergenic 40.0%
AGAATATCTAGAGACAGGAC+TGG + chr8_1:63256220-63256239 None:intergenic 40.0%
ACATGGAGCAATCAATGACA+TGG - chr8_1:63256330-63256349 Msa1206300:intron 40.0%
GCCCAAAAGATAAGAAACTG+TGG + chr8_1:63256429-63256448 None:intergenic 40.0%
! TGCCAGTAGCGGAAAAAAAA+AGG + chr8_1:63256518-63256537 None:intergenic 40.0%
! GTGCCATTGTTACTTACATC+AGG + chr8_1:63256557-63256576 None:intergenic 40.0%
!! CTCCAACTCTTCTGAAGTTA+AGG + chr8_1:63256657-63256676 None:intergenic 40.0%
CTTAACTTCAGAAGAGTTGG+AGG - chr8_1:63256655-63256674 Msa1206300:CDS 40.0%
!! ACTCAGTAGTAACTTGCTGT+TGG - chr8_1:63256955-63256974 Msa1206300:CDS 40.0%
TTCCCAAGTTTCCCAAATTG+GGG - chr8_1:63256990-63257009 Msa1206300:CDS 40.0%
CAAATCAACAAGAGATCGAG+TGG + chr8_1:63257028-63257047 None:intergenic 40.0%
! CACTCGATCTCTTGTTGATT+TGG - chr8_1:63257026-63257045 Msa1206300:CDS 40.0%
!! GATCTCTTGTTGATTTGGTG+AGG - chr8_1:63257031-63257050 Msa1206300:CDS 40.0%
CCTCTTAATATTGACATGGG+AGG + chr8_1:63257062-63257081 None:intergenic 40.0%
CCTCCCATGTCAATATTAAG+AGG - chr8_1:63257059-63257078 Msa1206300:CDS 40.0%
! AGATGGATTTGCGTTGGGAA+GGG + chr8_1:63252383-63252402 None:intergenic 45.0%
! AAGATGGATTTGCGTTGGGA+AGG + chr8_1:63252384-63252403 None:intergenic 45.0%
! GTGGAAGATGGATTTGCGTT+GGG + chr8_1:63252388-63252407 None:intergenic 45.0%
! AGTGGAAGATGGATTTGCGT+TGG + chr8_1:63252389-63252408 None:intergenic 45.0%
AGTGAGAAGAGAGTGGAAGA+TGG + chr8_1:63252400-63252419 None:intergenic 45.0%
GAATAGGAGGAGGGCTTATT+TGG - chr8_1:63252590-63252609 Msa1206300:three_prime_UTR 45.0%
!! TGGTGGAGTGTATTTTTCGG+AGG - chr8_1:63252626-63252645 Msa1206300:three_prime_UTR 45.0%
!! TGGAGTGTATTTTTCGGAGG+AGG - chr8_1:63252629-63252648 Msa1206300:three_prime_UTR 45.0%
GGGAAGTTTCAGGATAGGTT+TGG - chr8_1:63252693-63252712 Msa1206300:CDS 45.0%
AGTTTCAGGATAGGTTTGGG+AGG - chr8_1:63252697-63252716 Msa1206300:CDS 45.0%
! GGTGGTCTGATACACTTTTG+AGG - chr8_1:63252742-63252761 Msa1206300:CDS 45.0%
!! GGTCTGATACACTTTTGAGG+AGG - chr8_1:63252745-63252764 Msa1206300:CDS 45.0%
!! TACACTTTTGAGGAGGTGTG+AGG - chr8_1:63252752-63252771 Msa1206300:CDS 45.0%
TTACCAATCCACTCGCTTCT+GGG + chr8_1:63252828-63252847 None:intergenic 45.0%
ATTACCAATCCACTCGCTTC+TGG + chr8_1:63252829-63252848 None:intergenic 45.0%
!! AGCGAGTGGATTGGTAATGA+AGG - chr8_1:63252831-63252850 Msa1206300:CDS 45.0%
ACTTCAAGAGGAGGAAGAAG+AGG - chr8_1:63252854-63252873 Msa1206300:CDS 45.0%
TGAAAAAGACGAGACTGTGG+AGG - chr8_1:63252917-63252936 Msa1206300:CDS 45.0%
TTTAGTGCATGTGTCGTGTC+TGG + chr8_1:63252993-63253012 None:intergenic 45.0%
TGCTAGACTTAGGTCCTGTT+TGG - chr8_1:63253297-63253316 Msa1206300:intron 45.0%
TAAGCACTTGGGAGACTGTT+CGG + chr8_1:63253503-63253522 None:intergenic 45.0%
ATTGGTTAGGTGGTTGTGGT+TGG - chr8_1:63253685-63253704 Msa1206300:intron 45.0%
ATATGAATCTCCCTCCCTTC+TGG + chr8_1:63253750-63253769 None:intergenic 45.0%
CAGAGAAACCCTTTGCTGAA+AGG - chr8_1:63253818-63253837 Msa1206300:intron 45.0%
TTCCAAGGCCTTTCAGCAAA+GGG + chr8_1:63253829-63253848 None:intergenic 45.0%
TGAGCGGGAAAAAAAGAGGA+GGG + chr8_1:63253864-63253883 None:intergenic 45.0%
ATGAGCGGGAAAAAAAGAGG+AGG + chr8_1:63253865-63253884 None:intergenic 45.0%
TGCTTCTCCGTGATAAAGTC+CGG - chr8_1:63253955-63253974 Msa1206300:intron 45.0%
TGGACGGAGTTAAAACCTTG+GGG - chr8_1:63254004-63254023 Msa1206300:intron 45.0%
GTGGCATCACTCTTGATCTT+AGG + chr8_1:63254081-63254100 None:intergenic 45.0%
!! AGAAAGCGTTAAACCTCCTG+GGG + chr8_1:63254253-63254272 None:intergenic 45.0%
CAAATTGCAATGGACCCAAC+AGG - chr8_1:63254327-63254346 Msa1206300:intron 45.0%
! CAATCAACACATTGGCCTGT+TGG + chr8_1:63254345-63254364 None:intergenic 45.0%
!! GGATTTAGCTTGGTGGAGAT+AGG + chr8_1:63254391-63254410 None:intergenic 45.0%
TAAATTACCCTCGTTGGAGC+TGG + chr8_1:63254412-63254431 None:intergenic 45.0%
TGGGACTAAATTACCCTCGT+TGG + chr8_1:63254418-63254437 None:intergenic 45.0%
AAGTTTGCAATGGACCCATC+AGG - chr8_1:63254536-63254555 Msa1206300:intron 45.0%
! ATTCACCTCATTGGCCTGAT+GGG + chr8_1:63254553-63254572 None:intergenic 45.0%
GTTGGGTTCATTCACCTCAT+TGG + chr8_1:63254562-63254581 None:intergenic 45.0%
AGCTGAATCCAGTACCAATG+AGG - chr8_1:63254610-63254629 Msa1206300:intron 45.0%
GCTGAATCCAGTACCAATGA+GGG - chr8_1:63254611-63254630 Msa1206300:intron 45.0%
TAAGTTGCCCTCATTGGTAC+TGG + chr8_1:63254621-63254640 None:intergenic 45.0%
TTTCGGACCATCAACTACAG+TGG - chr8_1:63254726-63254745 Msa1206300:intron 45.0%
GGTGACTAGGAGTAAGTTAC+TGG - chr8_1:63254792-63254811 Msa1206300:intron 45.0%
GAAAGAGAACTCTCCTCCAA+AGG - chr8_1:63255044-63255063 Msa1206300:intron 45.0%
TTGGAAAAGGGAGAACCCTT+TGG + chr8_1:63255063-63255082 None:intergenic 45.0%
GGTTTCACCCAATAGTAGAG+TGG + chr8_1:63255292-63255311 None:intergenic 45.0%
ACTATTGGGTGAAACCCATG+TGG - chr8_1:63255296-63255315 Msa1206300:intron 45.0%
CTATTGGGTGAAACCCATGT+GGG - chr8_1:63255297-63255316 Msa1206300:intron 45.0%
TAAAGTGGTGAGACCCACAT+GGG + chr8_1:63255313-63255332 None:intergenic 45.0%
ATAAAGTGGTGAGACCCACA+TGG + chr8_1:63255314-63255333 None:intergenic 45.0%
! TCAAAAGTGTGGTCCTCACA+TGG - chr8_1:63255346-63255365 Msa1206300:intron 45.0%
TGGTACCACTCCATAGTGTT+AGG + chr8_1:63255445-63255464 None:intergenic 45.0%
TAACACTATGGAGTGGTACC+AGG - chr8_1:63255444-63255463 Msa1206300:intron 45.0%
AACACTATGGAGTGGTACCA+GGG - chr8_1:63255445-63255464 Msa1206300:intron 45.0%
AGTATCTGAAGGGGAACCAT+TGG - chr8_1:63255494-63255513 Msa1206300:intron 45.0%
GAACCATTGGATCTGTTTCG+TGG - chr8_1:63255507-63255526 Msa1206300:intron 45.0%
GGCAAGAACTACTTCAAGCA+GGG + chr8_1:63255570-63255589 None:intergenic 45.0%
TGGCAAGAACTACTTCAAGC+AGG + chr8_1:63255571-63255590 None:intergenic 45.0%
ACTAAGACAGATGCACAAGG+AGG - chr8_1:63255599-63255618 Msa1206300:intron 45.0%
TAGTCTGTCAAACAAGCAGC+AGG - chr8_1:63255625-63255644 Msa1206300:intron 45.0%
CAGTACAGATTCTAATGCCG+AGG - chr8_1:63255893-63255912 Msa1206300:intron 45.0%
GGATTTCTCAATTGCCAAGC+TGG - chr8_1:63255915-63255934 Msa1206300:intron 45.0%
TGCCAAGCTGGAATTTCAAG+GGG - chr8_1:63255927-63255946 Msa1206300:intron 45.0%
AGAGGTTGAACCTAGAATGG+AGG - chr8_1:63256059-63256078 Msa1206300:intron 45.0%
GAGGTTGAACCTAGAATGGA+GGG - chr8_1:63256060-63256079 Msa1206300:intron 45.0%
AGGTTGAACCTAGAATGGAG+GGG - chr8_1:63256061-63256080 Msa1206300:intron 45.0%
GGTGAGAATTCTCCTTCCAA+TGG + chr8_1:63256118-63256137 None:intergenic 45.0%
CTCCCCAATTTGGGAAACTT+GGG + chr8_1:63256995-63257014 None:intergenic 45.0%
TCTCCCCAATTTGGGAAACT+TGG + chr8_1:63256996-63257015 None:intergenic 45.0%
TTTCCCAAATTGGGGAGAAC+TGG - chr8_1:63256998-63257017 Msa1206300:CDS 45.0%
TTCCCAAATTGGGGAGAACT+GGG - chr8_1:63256999-63257018 Msa1206300:CDS 45.0%
!! AGCGTTCTAGGAAGAGGGAT+GGG + chr8_1:63252428-63252447 None:intergenic 50.0%
!! TAGCGTTCTAGGAAGAGGGA+TGG + chr8_1:63252429-63252448 None:intergenic 50.0%
TCCCTCTTCCTAGAACGCTA+CGG - chr8_1:63252429-63252448 Msa1206300:three_prime_UTR 50.0%
!! ACCGTAGCGTTCTAGGAAGA+GGG + chr8_1:63252433-63252452 None:intergenic 50.0%
!! AACCGTAGCGTTCTAGGAAG+AGG + chr8_1:63252434-63252453 None:intergenic 50.0%
GATTGGAACCGTAGCGTTCT+AGG + chr8_1:63252440-63252459 None:intergenic 50.0%
!! AAGCTTGTTGAGTCCGACGA+CGG - chr8_1:63252536-63252555 Msa1206300:three_prime_UTR 50.0%
AGGCTGTGGTTGCGAAGAAT+AGG - chr8_1:63252574-63252593 Msa1206300:three_prime_UTR 50.0%
CTGTGGTTGCGAAGAATAGG+AGG - chr8_1:63252577-63252596 Msa1206300:three_prime_UTR 50.0%
TGGTTGCGAAGAATAGGAGG+AGG - chr8_1:63252580-63252599 Msa1206300:three_prime_UTR 50.0%
GGTTGCGAAGAATAGGAGGA+GGG - chr8_1:63252581-63252600 Msa1206300:three_prime_UTR 50.0%
TTCAGGATAGGTTTGGGAGG+AGG - chr8_1:63252700-63252719 Msa1206300:CDS 50.0%
!! ACTTTTGAGGAGGTGTGAGG+AGG - chr8_1:63252755-63252774 Msa1206300:CDS 50.0%
AGAGGAGGAAGAAGAGGAAG+AGG - chr8_1:63252860-63252879 Msa1206300:CDS 50.0%
TAGGTGGTTGTGGTTGGAAC+AGG - chr8_1:63253691-63253710 Msa1206300:intron 50.0%
TGGTTGTGGTTGGAACAGGA+GGG - chr8_1:63253695-63253714 Msa1206300:intron 50.0%
AGGGTTAGAAACCAGAAGGG+AGG - chr8_1:63253736-63253755 Msa1206300:intron 50.0%
GGGTTAGAAACCAGAAGGGA+GGG - chr8_1:63253737-63253756 Msa1206300:intron 50.0%
AACCCTTTGCTGAAAGGCCT+TGG - chr8_1:63253824-63253843 Msa1206300:intron 50.0%
CTTCCAAGGCCTTTCAGCAA+AGG + chr8_1:63253830-63253849 None:intergenic 50.0%
GGGAGAGAATTCTGCTTCCA+AGG + chr8_1:63253844-63253863 None:intergenic 50.0%
CAGAAGGCCGGACTTTATCA+CGG + chr8_1:63253965-63253984 None:intergenic 50.0%
GGACGGAGTTAAAACCTTGG+GGG - chr8_1:63254005-63254024 Msa1206300:intron 50.0%
GAGTTCAACTGAATCCCCCA+AGG + chr8_1:63254022-63254041 None:intergenic 50.0%
!! TGGAGCTGGATTTAGCTTGG+TGG + chr8_1:63254398-63254417 None:intergenic 50.0%
CGTTGGAGCTGGATTTAGCT+TGG + chr8_1:63254401-63254420 None:intergenic 50.0%
AGCTAAATCCAGCTCCAACG+AGG - chr8_1:63254401-63254420 Msa1206300:intron 50.0%
GCTAAATCCAGCTCCAACGA+GGG - chr8_1:63254402-63254421 Msa1206300:intron 50.0%
! CATTCACCTCATTGGCCTGA+TGG + chr8_1:63254554-63254573 None:intergenic 50.0%
! TGGTACTGGATTCAGCTCAG+TGG + chr8_1:63254607-63254626 None:intergenic 50.0%
TCACCAATGCTTGAGCCACT+TGG + chr8_1:63254777-63254796 None:intergenic 50.0%
!! TGGCTCAAGCATTGGTGACT+AGG - chr8_1:63254779-63254798 Msa1206300:intron 50.0%
! TTACTGGGGTATTTCCTGGG+AGG - chr8_1:63254808-63254827 Msa1206300:intron 50.0%
! TACTGGGGTATTTCCTGGGA+GGG - chr8_1:63254809-63254828 Msa1206300:intron 50.0%
CACATTCTGTTTACCCTCCC+AGG + chr8_1:63254825-63254844 None:intergenic 50.0%
GAAAAGGGAGAACCCTTTGG+AGG + chr8_1:63255060-63255079 None:intergenic 50.0%
GTAGAGTGGGTGTTTGAGAG+TGG + chr8_1:63255278-63255297 None:intergenic 50.0%
GTGGGTCTCACCACTTTATG+TGG - chr8_1:63255315-63255334 Msa1206300:intron 50.0%
! GCGAGGCTTTATATTGGGCT+GGG + chr8_1:63255538-63255557 None:intergenic 50.0%
! TGCGAGGCTTTATATTGGGC+TGG + chr8_1:63255539-63255558 None:intergenic 50.0%
CTCTGTTGGCCACAATGGAA+CGG + chr8_1:63255732-63255751 None:intergenic 50.0%
TCCATTGTGGCCAACAGAGT+TGG - chr8_1:63255733-63255752 Msa1206300:intron 50.0%
TCCAACTCTGTTGGCCACAA+TGG + chr8_1:63255737-63255756 None:intergenic 50.0%
TGCATCAGCTCCAACTCTGT+TGG + chr8_1:63255746-63255765 None:intergenic 50.0%
GTAATGCTTCTTCTGCCCCT+CGG + chr8_1:63255862-63255881 None:intergenic 50.0%
!! GAGGGGCAGAAGAAGCATTA+CGG - chr8_1:63255861-63255880 Msa1206300:intron 50.0%
!! AGGGGCAGAAGAAGCATTAC+GGG - chr8_1:63255862-63255881 Msa1206300:intron 50.0%
GTCCCCTTGAAATTCCAGCT+TGG + chr8_1:63255932-63255951 None:intergenic 50.0%
AGCTGGAATTTCAAGGGGAC+AGG - chr8_1:63255932-63255951 Msa1206300:intron 50.0%
GCTGGAATTTCAAGGGGACA+GGG - chr8_1:63255933-63255952 Msa1206300:intron 50.0%
GGTTGAACCTAGAATGGAGG+GGG - chr8_1:63256062-63256081 Msa1206300:intron 50.0%
TCTGAATCCCCCTCCATTCT+AGG + chr8_1:63256072-63256091 None:intergenic 50.0%
ACATCATCTCTCACTCGAGC+TGG + chr8_1:63256587-63256606 None:intergenic 50.0%
CTTCAGAAGAGTTGGAGGAC+CGG - chr8_1:63256660-63256679 Msa1206300:CDS 50.0%
ATGAGACCCTTGACGACCAT+TGG - chr8_1:63256768-63256787 Msa1206300:CDS 50.0%
TCCCAAATTGGGGAGAACTG+GGG - chr8_1:63257000-63257019 Msa1206300:CDS 50.0%
TCCCCAGTTCTCCCCAATTT+GGG + chr8_1:63257004-63257023 None:intergenic 50.0%
CGAAGTGAGCGAAGAAGCGA+AGG - chr8_1:63252284-63252303 Msa1206300:three_prime_UTR 55.0%
TTTGCGTTGGGAAGGGAGTG+TGG + chr8_1:63252376-63252395 None:intergenic 55.0%
AGGTTAACTGGCACGTGACG+CGG - chr8_1:63252508-63252527 Msa1206300:three_prime_UTR 55.0%
GGATAGGTTTGGGAGGAGGA+TGG - chr8_1:63252704-63252723 Msa1206300:CDS 55.0%
! TTTGAGGAGGTGTGAGGAGG+CGG - chr8_1:63252758-63252777 Msa1206300:CDS 55.0%
GGCTAAGATTAGAGGGGAGC+AGG - chr8_1:63252788-63252807 Msa1206300:CDS 55.0%
AGATTAGAGGGGAGCAGGAG+AGG - chr8_1:63252793-63252812 Msa1206300:CDS 55.0%
GGAGGAAGAAGAGGAAGAGG+AGG - chr8_1:63252863-63252882 Msa1206300:CDS 55.0%
GGAAGAAGAGGAAGAGGAGG+AGG - chr8_1:63252866-63252885 Msa1206300:CDS 55.0%
AGAAGAGGAAGAGGAGGAGG+AGG - chr8_1:63252869-63252888 Msa1206300:CDS 55.0%
GTGGTTGTGGTTGGAACAGG+AGG - chr8_1:63253694-63253713 Msa1206300:intron 55.0%
ATGGACCCATCAGGCCAATG+AGG - chr8_1:63254545-63254564 Msa1206300:intron 55.0%
GGATTCAGCTCAGTGGACCT+AGG + chr8_1:63254600-63254619 None:intergenic 55.0%
GGCGACTAAGTTGCCCTCAT+TGG + chr8_1:63254627-63254646 None:intergenic 55.0%
TCGCCCCATCCTTCACTCTA+TGG - chr8_1:63254642-63254661 Msa1206300:intron 55.0%
CGGACCATCAACTACAGTGG+AGG - chr8_1:63254729-63254748 Msa1206300:intron 55.0%
GGTCCAAGTGGCTCAAGCAT+TGG - chr8_1:63254771-63254790 Msa1206300:intron 55.0%
AAGCAGGGTCCAAGAATGCG+AGG + chr8_1:63255555-63255574 None:intergenic 55.0%
GCACTCCTCTGTTCCACAGT+GGG + chr8_1:63255662-63255681 None:intergenic 55.0%
! GGGGTACTTCCGTTCCATTG+TGG - chr8_1:63255720-63255739 Msa1206300:intron 55.0%
ACAGAGAGACTGTCCAACCG+AGG - chr8_1:63255842-63255861 Msa1206300:intron 55.0%
CAGAGAGACTGTCCAACCGA+GGG - chr8_1:63255843-63255862 Msa1206300:intron 55.0%
AGAGAGACTGTCCAACCGAG+GGG - chr8_1:63255844-63255863 Msa1206300:intron 55.0%
CATCTGATTCAGCCAGAGCG+AGG - chr8_1:63256621-63256640 Msa1206300:CDS 55.0%
CCTCTGCCAATGGTCGTCAA+GGG + chr8_1:63256777-63256796 None:intergenic 55.0%
CCTTGACGACCATTGGCAGA+GGG - chr8_1:63256775-63256794 Msa1206300:CDS 55.0%
! TATTGGCCTCCCTCTGCCAA+TGG + chr8_1:63256787-63256806 None:intergenic 55.0%
GTCCCCAGTTCTCCCCAATT+TGG + chr8_1:63257005-63257024 None:intergenic 55.0%
GGTCGCGAGTGAGAAGAGAG+TGG + chr8_1:63252407-63252426 None:intergenic 60.0%
CTTGTTGAGTCCGACGACGG+AGG - chr8_1:63252539-63252558 Msa1206300:three_prime_UTR 60.0%
CTCCTCAACTCCTCCGTCGT+CGG + chr8_1:63252552-63252571 None:intergenic 60.0%
GACGGAGGAGTTGAGGAGGA+AGG - chr8_1:63252554-63252573 Msa1206300:three_prime_UTR 60.0%
GGAGTTGAGGAGGAAGGCTG+TGG - chr8_1:63252560-63252579 Msa1206300:three_prime_UTR 60.0%
GGAGGCGATGAGAGAACGTG+AGG - chr8_1:63252647-63252666 Msa1206300:three_prime_UTR 60.0%
GGTTTGGGAGGAGGATGGCT+AGG - chr8_1:63252709-63252728 Msa1206300:CDS 60.0%
GTATCAGACCACCTCTCCCC+CGG + chr8_1:63252735-63252754 None:intergenic 60.0%
GTGTGAGGAGGCGGAGATTG+TGG - chr8_1:63252767-63252786 Msa1206300:CDS 60.0%
AGAGGGGAGCAGGAGAGGAT+TGG - chr8_1:63252798-63252817 Msa1206300:CDS 60.0%
TTGGTGTGCCCAGAAGCGAG+TGG - chr8_1:63252817-63252836 Msa1206300:CDS 60.0%
GTGCCCAGAAGCGAGTGGAT+TGG - chr8_1:63252822-63252841 Msa1206300:CDS 60.0%
AGAGGAAGAGGAGGAGGAGG+AGG - chr8_1:63252872-63252891 Msa1206300:CDS 60.0%
CTGCACCCACTGTGGAACAG+AGG - chr8_1:63255654-63255673 Msa1206300:intron 60.0%
GGCACTCCTCTGTTCCACAG+TGG + chr8_1:63255663-63255682 None:intergenic 60.0%
TGCTTCTTCTGCCCCTCGGT+TGG + chr8_1:63255858-63255877 None:intergenic 60.0%
GCGCATGTCTCTGCCAGTAG+CGG + chr8_1:63256529-63256548 None:intergenic 60.0%
TGATTCAGCCAGAGCGAGGC+AGG - chr8_1:63256625-63256644 Msa1206300:CDS 60.0%
CCCTTGACGACCATTGGCAG+AGG - chr8_1:63256774-63256793 Msa1206300:CDS 60.0%
CCCTCTGCCAATGGTCGTCA+AGG + chr8_1:63256778-63256797 None:intergenic 60.0%
TGACGACCATTGGCAGAGGG+AGG - chr8_1:63256778-63256797 Msa1206300:CDS 60.0%
!! GCGGTGGATTGTTGAGCGCG+TGG + chr8_1:63252354-63252373 None:intergenic 65.0%
! TTGGGAAGGGAGTGTGGCGG+TGG + chr8_1:63252370-63252389 None:intergenic 65.0%
! GCGTTGGGAAGGGAGTGTGG+CGG + chr8_1:63252373-63252392 None:intergenic 65.0%
GTCCGACGACGGAGGAGTTG+AGG - chr8_1:63252547-63252566 Msa1206300:three_prime_UTR 65.0%
CGACGACGGAGGAGTTGAGG+AGG - chr8_1:63252550-63252569 Msa1206300:three_prime_UTR 65.0%
TGGGAGGAGGATGGCTAGGC+CGG - chr8_1:63252713-63252732 Msa1206300:CDS 65.0%
GGTTGGATCCTGCCTCGCTC+TGG + chr8_1:63256636-63256655 None:intergenic 65.0%
GGGAGGAGGATGGCTAGGCC+GGG - chr8_1:63252714-63252733 Msa1206300:CDS 70.0%
GGAGGAGGATGGCTAGGCCG+GGG - chr8_1:63252715-63252734 Msa1206300:CDS 70.0%
GAGGAGGATGGCTAGGCCGG+GGG - chr8_1:63252716-63252735 Msa1206300:CDS 70.0%
GGTCGCAGCTGCACCCACTG+TGG - chr8_1:63255646-63255665 Msa1206300:intron 70.0%
GGATGGCTAGGCCGGGGGAG+AGG - chr8_1:63252721-63252740 Msa1206300:CDS 75.0%
TGGCTAGGCCGGGGGAGAGG+TGG - chr8_1:63252724-63252743 Msa1206300:CDS 75.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 63252242 63257290 63252242 ID=Msa1206300;Name=Msa1206300
chr8_1 mRNA 63252242 63257290 63252242 ID=Msa1206300-mRNA-1;Parent=Msa1206300;Name=Msa1206300-mRNA-1;_AED=0.01;_eAED=0.01;_QI=19|1|1|1|0|1|2|449|326
chr8_1 exon 63252242 63252993 63252242 ID=Msa1206300-mRNA-1:exon:20470;Parent=Msa1206300-mRNA-1
chr8_1 exon 63256594 63257290 63256594 ID=Msa1206300-mRNA-1:exon:20469;Parent=Msa1206300-mRNA-1
chr8_1 five_prime_UTR 63257272 63257290 63257272 ID=Msa1206300-mRNA-1:five_prime_utr;Parent=Msa1206300-mRNA-1
chr8_1 CDS 63256594 63257271 63256594 ID=Msa1206300-mRNA-1:cds;Parent=Msa1206300-mRNA-1
chr8_1 CDS 63252691 63252993 63252691 ID=Msa1206300-mRNA-1:cds;Parent=Msa1206300-mRNA-1
chr8_1 three_prime_UTR 63252242 63252690 63252242 ID=Msa1206300-mRNA-1:three_prime_utr;Parent=Msa1206300-mRNA-1
Gene Sequence

>Msa1206300

ATGGAAGTGAAGCAGAAGAAAAACGAAGTGAGCGAAGAAGCGAAGGAGAAAATCTCAGAAAGACTATCAAATCTAGAGAATCTATGGTTTCCACGCGCTCAACAATCCACCGCCACACTCCCTTCCCAACGCAAATCCATCTTCCACTCTCTTCTCACTCGCGACCCATCCCTCTTCCTAGAACGCTACGGTTCCAATCTCACTTCCATCGAATTAACCGAATTCGAAACCCTAAAAGATGACTACGAGGTTAACTGGCACGTGACGCGGTTGCAAAGCTTGTTGAGTCCGACGACGGAGGAGTTGAGGAGGAAGGCTGTGGTTGCGAAGAATAGGAGGAGGGCTTATTTGGATAAGTTGATGGTTGGTGGAGTGTATTTTTCGGAGGAGGCGATGAGAGAACGTGAGGCGTATTTGCATTATGAGTATGTTGGGAAGTTTCAGGATAGGTTTGGGAGGAGGATGGCTAGGCCGGGGGAGAGGTGGTCTGATACACTTTTGAGGAGGTGTGAGGAGGCGGAGATTGTGGCTAAGATTAGAGGGGAGCAGGAGAGGATTGGTGTGCCCAGAAGCGAGTGGATTGGTAATGAAGGACTTCAAGAGGAGGAAGAAGAGGAAGAGGAGGAGGAGGAGGAAGAAGAAGAAGAAGAAGATGTTGAAAAAGACGAGACTGTGGAGAGACATGCGCCTCAACCTGATGTAAGTAACAATGGCACATCTGATCCAGCTCGAGTGAGAGATGATGTAACTGATAACGGCACATCTGATTCAGCCAGAGCGAGGCAGGATCCAACCTTAACTTCAGAAGAGTTGGAGGACCGGATGAATCAATTCACTTACATCATGCAGCAGAAGTTTCTATTAGGAGAAGATCACGAACATGTAGATTATGCTAAAATAGATAACGATGAGACCCTTGACGACCATTGGCAGAGGGAGGCCAATATTGATGCAGAAGAGAGATATTTTGCTGATGATTAA
Protein sequence

>Msa1206300

MEVKQKKNEVSEEAKEKISERLSNLENLWFPRAQQSTATLPSQRKSIFHSLLTRDPSLFLERYGSNLTSIELTEFETLKDDYEVNWHVTRLQSLLSPTTEELRRKAVVAKNRRRAYLDKLMVGGVYFSEEAMREREAYLHYEYVGKFQDRFGRRMARPGERWSDTLLRRCEEAEIVAKIRGEQERIGVPRSEWIGNEGLQEEEEEEEEEEEEEEEEEDVEKDETVERHAPQPDVSNNGTSDPARVRDDVTDNGTSDSARARQDPTLTSEELEDRMNQFTYIMQQKFLLGEDHEHVDYAKIDNDETLDDHWQREANIDAEERYFADD*