Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1210960 | XP_024636098.1 | 98.352 | 364 | 5 | 1 | 1 | 363 | 1 | 364 | 0.0 | 738 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1210960 | sp|Q8LSZ4|E2FE_ARATH | 53.297 | 364 | 134 | 12 | 12 | 361 | 29 | 370 | 3.39e-106 | 320 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa1210960 | TF | E2F-DP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1210960 | Msa1299090 | 0.917581 | 4.458858e-86 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1210960 | MtrunA17_Chr4g0059551 | 96.143 | 363 | 7 | 2 | 1 | 362 | 1 | 357 | 0.0 | 714 |
| Msa1210960 | MtrunA17_Chr4g0025881 | 46.269 | 67 | 36 | 0 | 17 | 83 | 138 | 204 | 3.88e-12 | 67.4 |
| Msa1210960 | MtrunA17_Chr3g0142581 | 46.377 | 69 | 37 | 0 | 14 | 82 | 99 | 167 | 1.13e-11 | 65.5 |
| Msa1210960 | MtrunA17_Chr1g0177351 | 44.776 | 67 | 37 | 0 | 17 | 83 | 142 | 208 | 2.63e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1210960 | AT3G48160.1 | 53.825 | 366 | 131 | 13 | 12 | 362 | 29 | 371 | 5.91e-109 | 324 |
| Msa1210960 | AT3G48160.2 | 53.297 | 364 | 134 | 12 | 12 | 361 | 29 | 370 | 3.45e-107 | 320 |
| Msa1210960 | AT3G01330.1 | 46.705 | 349 | 151 | 6 | 13 | 361 | 17 | 330 | 4.32e-92 | 280 |
| Msa1210960 | AT5G14960.1 | 40.503 | 358 | 171 | 9 | 13 | 360 | 9 | 334 | 5.03e-77 | 241 |
| Msa1210960 | AT5G14960.2 | 35.945 | 217 | 116 | 6 | 154 | 360 | 38 | 241 | 9.31e-32 | 120 |
| Msa1210960 | AT5G22220.2 | 44.776 | 67 | 37 | 0 | 17 | 83 | 129 | 195 | 4.60e-11 | 64.3 |
| Msa1210960 | AT5G22220.3 | 44.776 | 67 | 37 | 0 | 17 | 83 | 129 | 195 | 4.83e-11 | 64.3 |
Find 121 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCTGGGAAAAGTTGAATT+AGG | 0.171110 | 8_1:+70333530 | None:intergenic |
| GAGAGATGTTTGATGAATTA+AGG | 0.183601 | 8_1:+70334526 | None:intergenic |
| TGGATCTGAAATTCGAAATT+TGG | 0.191238 | 8_1:+70334489 | None:intergenic |
| CTTAATATACCTTTAATATA+AGG | 0.204441 | 8_1:-70331046 | Msa1210960:three_prime_UTR |
| AAAGACGATGTTCGTTTAAT+TGG | 0.211016 | 8_1:-70334275 | Msa1210960:CDS |
| CACCCTGACTTCCAGTGGTT+TGG | 0.211662 | 8_1:+70333597 | None:intergenic |
| GGCAATTCCTGTTGCTTTAC+AGG | 0.216414 | 8_1:-70333917 | Msa1210960:CDS |
| TTCAGGTGGCTAGGCTTAAA+AGG | 0.224076 | 8_1:-70331958 | Msa1210960:CDS |
| CGATGATGTTGTTCGAATTA+AGG | 0.234552 | 8_1:+70334562 | None:intergenic |
| GACGATGCTGCCGCCAAATT+AGG | 0.253633 | 8_1:-70334248 | Msa1210960:intron |
| GTAATAATGAATACCTAATT+TGG | 0.256592 | 8_1:+70334235 | None:intergenic |
| CAGAGCCGTTTAGATATAAA+AGG | 0.269147 | 8_1:+70334594 | None:intergenic |
| ATTCAAAACAAAACGATTCT+AGG | 0.280464 | 8_1:-70331906 | Msa1210960:CDS |
| TTTCCAGGTATACTGATTCT+TGG | 0.296038 | 8_1:+70333948 | None:intergenic |
| AACGTGCAACCTTATATTAA+AGG | 0.308309 | 8_1:+70331037 | None:intergenic |
| ACCCTGACTTCCAGTGGTTT+GGG | 0.311184 | 8_1:+70333598 | None:intergenic |
| ATCTGGGAAAAGTTGAATTA+GGG | 0.323897 | 8_1:+70333531 | None:intergenic |
| AATTGCCGCAAAACCTTTCC+AGG | 0.340573 | 8_1:+70333933 | None:intergenic |
| TACCTTCTCGATAAGGTTCA+TGG | 0.347489 | 8_1:+70332147 | None:intergenic |
| TGTTGCTTTACAGGAGCTTA+AGG | 0.369256 | 8_1:-70333908 | Msa1210960:intron |
| ATTCTCAGAGCTTCCAGCTT+TGG | 0.369624 | 8_1:+70331690 | None:intergenic |
| ATCCCAAACCACTGGAAGTC+AGG | 0.370120 | 8_1:-70333600 | Msa1210960:CDS |
| ATTCTGACTTCCAGTGGGTT+GGG | 0.370825 | 8_1:+70333565 | None:intergenic |
| ACTTCAGCTAACTATCAATT+TGG | 0.373900 | 8_1:-70331736 | Msa1210960:CDS |
| GGCCGAAATTTGAAAATTGA+TGG | 0.374089 | 8_1:+70334656 | None:intergenic |
| CATTCTGACTTCCAGTGGGT+TGG | 0.380743 | 8_1:+70333564 | None:intergenic |
| TTCATGGATAGATAGATAGA+TGG | 0.386470 | 8_1:+70334815 | None:intergenic |
| GAACAAGTCTGTTCTATTCC+TGG | 0.392480 | 8_1:+70331843 | None:intergenic |
| ATGAAAATGCTTAATTGCCT+TGG | 0.399936 | 8_1:+70331605 | None:intergenic |
| TCAATGTTCTCGAAAGCATC+GGG | 0.403367 | 8_1:-70334103 | Msa1210960:CDS |
| GTACAGCCTAATCAGATATT+AGG | 0.403736 | 8_1:+70331147 | None:intergenic |
| AAGTGAAGCAGGTGCATGAC+TGG | 0.407996 | 8_1:-70331666 | Msa1210960:CDS |
| AGTATATTACCTTCTCGATA+AGG | 0.412345 | 8_1:+70332140 | None:intergenic |
| TCTTGGTACTCTGAAGTTGC+TGG | 0.425848 | 8_1:-70331326 | Msa1210960:three_prime_UTR |
| ACATGGAAGCATGGAAATCT+TGG | 0.426073 | 8_1:-70331343 | Msa1210960:three_prime_UTR |
| AACAAAACGATTCTAGGAAA+AGG | 0.426966 | 8_1:-70331900 | Msa1210960:CDS |
| ATATCTGATTAGGCTGTACT+TGG | 0.428901 | 8_1:-70331143 | Msa1210960:three_prime_UTR |
| GCACATTTGCAATATCATAA+AGG | 0.434271 | 8_1:+70332176 | None:intergenic |
| GATTCTAGGAAAAGGGCGTT+TGG | 0.443366 | 8_1:-70331892 | Msa1210960:CDS |
| TTAAGCTCCTGTAAAGCAAC+AGG | 0.443519 | 8_1:+70333910 | None:intergenic |
| ATACAAGAAAACCAGCATTC+AGG | 0.443643 | 8_1:-70331975 | Msa1210960:CDS |
| AAATGATAGTGGGCTATGTC+TGG | 0.446224 | 8_1:-70331785 | Msa1210960:CDS |
| CTGGCCTTGCAGCAAAAGTT+AGG | 0.448266 | 8_1:-70332201 | Msa1210960:CDS |
| AAGACAATGGAAAATGATAG+TGG | 0.463413 | 8_1:-70331796 | Msa1210960:CDS |
| ATAACACCTCTTTGTGCAAA+GGG | 0.468799 | 8_1:-70331110 | Msa1210960:three_prime_UTR |
| GATACAAAGGCAGGAGCAAA+AGG | 0.470114 | 8_1:+70331712 | None:intergenic |
| AAGCCTAGCCACCTGAATGC+TGG | 0.489317 | 8_1:+70331964 | None:intergenic |
| CTCTGAGAATAAAGTGAAGC+AGG | 0.496045 | 8_1:-70331677 | Msa1210960:CDS |
| AATTTCGAATTTCAGATCCA+TGG | 0.497190 | 8_1:-70334486 | Msa1210960:exon |
| ACAAAACGATTCTAGGAAAA+GGG | 0.498407 | 8_1:-70331899 | Msa1210960:CDS |
| ACACTTACTTGGTGCATAAG+AGG | 0.500577 | 8_1:+70334399 | None:intergenic |
| CCTGCCTTTGTATCCAAAGC+TGG | 0.506957 | 8_1:-70331703 | Msa1210960:CDS |
| GAATAGAACAGACTTGTTCA+TGG | 0.511403 | 8_1:-70331839 | Msa1210960:CDS |
| AGAGCCGTTTAGATATAAAA+GGG | 0.513466 | 8_1:+70334595 | None:intergenic |
| AGAACTTTACTCTCATTACA+TGG | 0.523192 | 8_1:-70331360 | Msa1210960:three_prime_UTR |
| ACAACCTTGCTGCATCATCA+AGG | 0.524403 | 8_1:+70332344 | None:intergenic |
| AAGCCAAGAATCAGTATACC+TGG | 0.526713 | 8_1:-70333951 | Msa1210960:CDS |
| TTGTGTGTTGAGAGTGTGGC+GGG | 0.528365 | 8_1:+70334635 | None:intergenic |
| AAAATCCGTACATTCTATGT+TGG | 0.531566 | 8_1:+70331188 | None:intergenic |
| GTGTTTGTGTGTTGAGAGTG+TGG | 0.534300 | 8_1:+70334631 | None:intergenic |
| AGATTTCCCTTTGCACAAAG+AGG | 0.535412 | 8_1:+70331104 | None:intergenic |
| ACTTGGTGCATAAGAGGCCG+AGG | 0.537885 | 8_1:+70334405 | None:intergenic |
| AATCTCAATTCTTCACAAGA+AGG | 0.539424 | 8_1:-70333762 | Msa1210960:CDS |
| ACTCTGAAGTTGCTGGGAAG+AGG | 0.539687 | 8_1:-70331319 | Msa1210960:three_prime_UTR |
| GTCAATGTTCTCGAAAGCAT+CGG | 0.541833 | 8_1:-70334104 | Msa1210960:CDS |
| GCTTGGCCTAATATCTGATT+AGG | 0.543869 | 8_1:-70331153 | Msa1210960:three_prime_UTR |
| TCACAAACATAAGCTTTGCC+AGG | 0.545422 | 8_1:-70331861 | Msa1210960:CDS |
| AAGAATCAGTATACCTGGAA+AGG | 0.546799 | 8_1:-70333946 | Msa1210960:CDS |
| TTGCGATTTGCGTTGGAGGG+AGG | 0.548686 | 8_1:+70334714 | None:intergenic |
| ATGTGCCAACATAGAATGTA+CGG | 0.549625 | 8_1:-70331193 | Msa1210960:three_prime_UTR |
| GATGCAGCAAGGTTGTTGCT+TGG | 0.550005 | 8_1:-70332337 | Msa1210960:CDS |
| CCAGCTTTGGATACAAAGGC+AGG | 0.550221 | 8_1:+70331703 | None:intergenic |
| ATCTGAAATTCGAAATTTGG+AGG | 0.550384 | 8_1:+70334492 | None:intergenic |
| ATCGGAGGAAGAAGCAGCCA+TGG | 0.550392 | 8_1:+70334469 | None:intergenic |
| ATTGTCATTCTGACTTCCAG+TGG | 0.553060 | 8_1:+70333559 | None:intergenic |
| TATAACACCTCTTTGTGCAA+AGG | 0.559083 | 8_1:-70331111 | Msa1210960:three_prime_UTR |
| AAACCAGCATTCAGGTGGCT+AGG | 0.559723 | 8_1:-70331967 | Msa1210960:CDS |
| TCGTAAGTGTGGTGTCGTGA+AGG | 0.561541 | 8_1:+70334443 | None:intergenic |
| TTGTCATTCTGACTTCCAGT+GGG | 0.561775 | 8_1:+70333560 | None:intergenic |
| TCAGGTGGCTAGGCTTAAAA+GGG | 0.561931 | 8_1:-70331957 | Msa1210960:CDS |
| CTCCATGAACCTTATCGAGA+AGG | 0.564896 | 8_1:-70332149 | Msa1210960:intron |
| CTTGGTACTCTGAAGTTGCT+GGG | 0.568986 | 8_1:-70331325 | Msa1210960:three_prime_UTR |
| GGTAACCCTAATGGAAGTGA+TGG | 0.570404 | 8_1:-70334876 | None:intergenic |
| AGAATTCAAATACGAGGTTG+CGG | 0.578791 | 8_1:-70334848 | Msa1210960:five_prime_UTR |
| GTTCAGGTGTTGAGAGAAGA+CGG | 0.579277 | 8_1:-70334139 | Msa1210960:intron |
| TCCCAAACCACTGGAAGTCA+GGG | 0.581818 | 8_1:-70333599 | Msa1210960:CDS |
| TCTGAAATTCGAAATTTGGA+GGG | 0.584453 | 8_1:+70334493 | None:intergenic |
| ATAATGAATACCTAATTTGG+CGG | 0.587773 | 8_1:+70334238 | None:intergenic |
| GCTTCCAGCTTTGGATACAA+AGG | 0.589316 | 8_1:+70331699 | None:intergenic |
| GGTATCGGATGAAGAGGATG+AGG | 0.589877 | 8_1:-70333633 | Msa1210960:CDS |
| TGATTCACCCTGACTTCCAG+TGG | 0.592103 | 8_1:+70333592 | None:intergenic |
| AAAAGGGAAGACATTGAATG+AGG | 0.592429 | 8_1:-70331941 | Msa1210960:CDS |
| AGTGAAGCAGGTGCATGACT+GGG | 0.592595 | 8_1:-70331665 | Msa1210960:CDS |
| GATTTAGGTATCGGATGAAG+AGG | 0.593110 | 8_1:-70333639 | Msa1210960:intron |
| TTTGTTTACGATCGTAAGTG+TGG | 0.596230 | 8_1:+70334432 | None:intergenic |
| AATAGAACAGACTTGTTCAT+GGG | 0.597678 | 8_1:-70331838 | Msa1210960:CDS |
| GTGGTGTCGTGAAGGAGGAT+CGG | 0.598361 | 8_1:+70334451 | None:intergenic |
| CAACCTTGCTGCATCATCAA+GGG | 0.604844 | 8_1:+70332345 | None:intergenic |
| CTCAATTCTTCACAAGAAGG+TGG | 0.607030 | 8_1:-70333759 | Msa1210960:CDS |
| CTTGGTGCATAAGAGGCCGA+GGG | 0.608163 | 8_1:+70334406 | None:intergenic |
| AGACAATGGAAAATGATAGT+GGG | 0.608266 | 8_1:-70331795 | Msa1210960:CDS |
| ACTCTCATTACATGGAAGCA+TGG | 0.610228 | 8_1:-70331352 | Msa1210960:three_prime_UTR |
| GAATCACTATCCCAACCCAC+TGG | 0.620440 | 8_1:-70333575 | Msa1210960:CDS |
| GAATTGTTATCCCAAACCAC+TGG | 0.620803 | 8_1:-70333608 | Msa1210960:CDS |
| TAAGTGTGGTGTCGTGAAGG+AGG | 0.625428 | 8_1:+70334446 | None:intergenic |
| CTTTAAGAAGCAAAAGACAA+TGG | 0.627305 | 8_1:-70331809 | Msa1210960:CDS |
| AGGTGGCAATGAAGATGTGA+AGG | 0.635108 | 8_1:-70333742 | Msa1210960:intron |
| TGTGTCTAAGTACACTACAA+TGG | 0.635405 | 8_1:+70331222 | None:intergenic |
| CAAGAAAACCAGCATTCAGG+TGG | 0.647844 | 8_1:-70331972 | Msa1210960:CDS |
| TATCTGATTAGGCTGTACTT+GGG | 0.658236 | 8_1:-70331142 | Msa1210960:three_prime_UTR |
| TGCCCTCAGTATCAAAACCA+AGG | 0.661299 | 8_1:-70331622 | Msa1210960:CDS |
| GTGTCGTGAAGGAGGATCGG+AGG | 0.668512 | 8_1:+70334454 | None:intergenic |
| GAGCCGTTTAGATATAAAAG+GGG | 0.668908 | 8_1:+70334596 | None:intergenic |
| CTTCTCGATAAGGTTCATGG+AGG | 0.669999 | 8_1:+70332150 | None:intergenic |
| AGAACAGACTTGTTCATGGG+TGG | 0.672206 | 8_1:-70331835 | Msa1210960:CDS |
| TTTGTGTGTTGAGAGTGTGG+CGG | 0.679026 | 8_1:+70334634 | None:intergenic |
| TGTCTGGAAGATGTGAAACA+AGG | 0.683639 | 8_1:-70331769 | Msa1210960:CDS |
| AGCCGTTTAGATATAAAAGG+GGG | 0.695293 | 8_1:+70334597 | None:intergenic |
| CAATGTTCTCGAAAGCATCG+GGG | 0.717872 | 8_1:-70334102 | Msa1210960:intron |
| TATCCCTTGATGATGCAGCA+AGG | 0.728015 | 8_1:-70332348 | Msa1210960:CDS |
| GATAAGAGAATTCAAATACG+AGG | 0.763019 | 8_1:-70334854 | Msa1210960:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTAATAAAAAAAAAAA+AGG | + | chr8_1:70331830-70331849 | None:intergenic | 0.0% |
| !! | TTAATAAAAAAAAAAAAGGT+GGG | + | chr8_1:70331826-70331845 | None:intergenic | 10.0% |
| !! | ATTAATAAAAAAAAAAAAGG+TGG | + | chr8_1:70331827-70331846 | None:intergenic | 10.0% |
| !!! | TTTTATTAATTTTTGTTCAT+CGG | - | chr8_1:70331837-70331856 | Msa1210960:CDS | 10.0% |
| !!! | GATATTTTTAAATCATTAAA+AGG | + | chr8_1:70332561-70332580 | None:intergenic | 10.0% |
| !! | TTATAAAATTCAATAAACAA+TGG | + | chr8_1:70333222-70333241 | None:intergenic | 10.0% |
| !!! | TTTATTGAATTTTATAATAC+TGG | - | chr8_1:70333225-70333244 | Msa1210960:intron | 10.0% |
| !!! | TAGATTCTTTATTAATTTTA+TGG | - | chr8_1:70334840-70334859 | Msa1210960:five_prime_UTR | 10.0% |
| !!! | AGATTCTTTATTAATTTTAT+GGG | - | chr8_1:70334841-70334860 | Msa1210960:five_prime_UTR | 10.0% |
| !!! | TCACTAATTATTTATTGATT+CGG | - | chr8_1:70331524-70331543 | Msa1210960:intron | 15.0% |
| !!! | TTAAGGTAATTTCAAATTTT+AGG | - | chr8_1:70331964-70331983 | Msa1210960:CDS | 15.0% |
| !!! | TAATTGTTTTGATTTTGAAT+GGG | - | chr8_1:70332045-70332064 | Msa1210960:intron | 15.0% |
| !!! | ATTTTTATGAGAAGTATAAT+TGG | - | chr8_1:70332163-70332182 | Msa1210960:CDS | 15.0% |
| !!! | AAATGGTAACTTTTTTATTT+TGG | - | chr8_1:70332354-70332373 | Msa1210960:CDS | 15.0% |
| !!! | AATGGTAACTTTTTTATTTT+GGG | - | chr8_1:70332355-70332374 | Msa1210960:CDS | 15.0% |
| !!! | TTTTGTTTTTCTTCAAATTT+TGG | - | chr8_1:70332522-70332541 | Msa1210960:CDS | 15.0% |
| !!! | TTTGTTTTTCTTCAAATTTT+GGG | - | chr8_1:70332523-70332542 | Msa1210960:CDS | 15.0% |
| !!! | AATATAAAATGAAAAGTGTA+AGG | + | chr8_1:70333741-70333760 | None:intergenic | 15.0% |
| !! | CTTAATATACCTTTAATATA+AGG | - | chr8_1:70334809-70334828 | Msa1210960:five_prime_UTR | 15.0% |
| !!! | TTTACTGTTTTGTTTTTTCA+TGG | + | chr8_1:70331059-70331078 | None:intergenic | 20.0% |
| !!! | TAAAATCTTTTTCAGTTAAG+CGG | + | chr8_1:70331095-70331114 | None:intergenic | 20.0% |
| !!! | TTCCATCAATTTTCAAATTT+CGG | - | chr8_1:70331197-70331216 | Msa1210960:three_prime_UTR | 20.0% |
| !! | GTAATAATGAATACCTAATT+TGG | + | chr8_1:70331623-70331642 | None:intergenic | 20.0% |
| !!! | GGTTTTTTATTGTTTTTGTT+TGG | - | chr8_1:70331858-70331877 | Msa1210960:CDS | 20.0% |
| !!! | GTTTTTGTTTGGTTTTTTTT+AGG | - | chr8_1:70331869-70331888 | Msa1210960:CDS | 20.0% |
| !! | TCACAGAATTTAAATTAAGA+AGG | + | chr8_1:70331998-70332017 | None:intergenic | 20.0% |
| !!! | GTAATTGTTTTGATTTTGAA+TGG | - | chr8_1:70332044-70332063 | Msa1210960:intron | 20.0% |
| !! | AGAAGAATAAACTGTAAATA+TGG | + | chr8_1:70332477-70332496 | None:intergenic | 20.0% |
| !! | TATTCTTCTAAATGCATTAT+AGG | - | chr8_1:70332488-70332507 | Msa1210960:intron | 20.0% |
| !! | TTAACTAAATTATCATTCTC+TGG | + | chr8_1:70333184-70333203 | None:intergenic | 20.0% |
| !!! | ATTAATTTTATGGGTCAAAT+TGG | - | chr8_1:70334850-70334869 | Msa1210960:five_prime_UTR | 20.0% |
| !!! | AAAATCTTTTTCAGTTAAGC+GGG | + | chr8_1:70331094-70331113 | None:intergenic | 25.0% |
| !!! | GTTTTTTTGGATCCAAAAAT+TGG | + | chr8_1:70331169-70331188 | None:intergenic | 25.0% |
| ! | ATAATGAATACCTAATTTGG+CGG | + | chr8_1:70331620-70331639 | None:intergenic | 25.0% |
| !!! | TTGATTTTGAATGGGTTTTT+AGG | - | chr8_1:70332053-70332072 | Msa1210960:intron | 25.0% |
| !! | AGAAGTATAATTGGTTTAGT+AGG | - | chr8_1:70332172-70332191 | Msa1210960:CDS | 25.0% |
| !! | GAAGTATAATTGGTTTAGTA+GGG | - | chr8_1:70332173-70332192 | Msa1210960:CDS | 25.0% |
| ! | TTTAAGTACTTTCGTGATTT+AGG | - | chr8_1:70332201-70332220 | Msa1210960:CDS | 25.0% |
| !!! | TTACCATTTTTCAAAGATCT+GGG | + | chr8_1:70332343-70332362 | None:intergenic | 25.0% |
| !!! | ATAGCAGAATTTTTGAAACA+TGG | - | chr8_1:70332653-70332672 | Msa1210960:intron | 25.0% |
| !!! | TAGCAGAATTTTTGAAACAT+GGG | - | chr8_1:70332654-70332673 | Msa1210960:intron | 25.0% |
| ! | TGCAATTTGCAAATTAAAGT+TGG | + | chr8_1:70332712-70332731 | None:intergenic | 25.0% |
| !! | AACCCTTATTTAGTTAACTT+GGG | + | chr8_1:70332801-70332820 | None:intergenic | 25.0% |
| ! | CTAAGTGTTTGTTTAGATTA+AGG | + | chr8_1:70332929-70332948 | None:intergenic | 25.0% |
| !!! | ATCAGATTGTTCAAGTTTTT+AGG | - | chr8_1:70333060-70333079 | Msa1210960:intron | 25.0% |
| !! | TTAGGATGTTTTCTTTTCTT+AGG | - | chr8_1:70333078-70333097 | Msa1210960:intron | 25.0% |
| !! | TAGGATGTTTTCTTTTCTTA+GGG | - | chr8_1:70333079-70333098 | Msa1210960:intron | 25.0% |
| !!! | TTGTTTTGTTCGAATGTAAA+TGG | + | chr8_1:70333114-70333133 | None:intergenic | 25.0% |
| ! | AATTTAGTTAAAGATGTGCA+TGG | - | chr8_1:70333193-70333212 | Msa1210960:intron | 25.0% |
| ! | ATTAAAGACATAAATCAGCT+TGG | + | chr8_1:70333415-70333434 | None:intergenic | 25.0% |
| ! | AGTTTAACATATCAGATGTA+TGG | + | chr8_1:70333445-70333464 | None:intergenic | 25.0% |
| ! | GTTAACGAAAACAAACAAAT+TGG | + | chr8_1:70333595-70333614 | None:intergenic | 25.0% |
| ! | ATAAAGAAATCAATGCAAAG+AGG | + | chr8_1:70333817-70333836 | None:intergenic | 25.0% |
| ! | ATTCAAAACAAAACGATTCT+AGG | - | chr8_1:70333949-70333968 | Msa1210960:CDS | 25.0% |
| !! | TTTTGATACTGTTTCATAGT+TGG | - | chr8_1:70334369-70334388 | Msa1210960:intron | 25.0% |
| ! | TTTGATACTGTTTCATAGTT+GGG | - | chr8_1:70334370-70334389 | Msa1210960:intron | 25.0% |
| ! | TATGTTTAATCTTTATGCAG+TGG | - | chr8_1:70334402-70334421 | Msa1210960:intron | 25.0% |
| GATAAGAGAATTCAAATACG+AGG | - | chr8_1:70331001-70331020 | Msa1210960:three_prime_UTR | 30.0% | |
| TTCATGGATAGATAGATAGA+TGG | + | chr8_1:70331043-70331062 | None:intergenic | 30.0% | |
| ! | CAAATCGCAAAACCAATTTT+TGG | - | chr8_1:70331154-70331173 | Msa1210960:three_prime_UTR | 30.0% |
| ! | TTCCCCCTTTTATATCTAAA+CGG | - | chr8_1:70331256-70331275 | Msa1210960:three_prime_UTR | 30.0% |
| AGAGCCGTTTAGATATAAAA+GGG | + | chr8_1:70331263-70331282 | None:intergenic | 30.0% | |
| GAGAGATGTTTGATGAATTA+AGG | + | chr8_1:70331332-70331351 | None:intergenic | 30.0% | |
| ! | TCTGAAATTCGAAATTTGGA+GGG | + | chr8_1:70331365-70331384 | None:intergenic | 30.0% |
| ! | ATCTGAAATTCGAAATTTGG+AGG | + | chr8_1:70331366-70331385 | None:intergenic | 30.0% |
| ! | TGGATCTGAAATTCGAAATT+TGG | + | chr8_1:70331369-70331388 | None:intergenic | 30.0% |
| AATTTCGAATTTCAGATCCA+TGG | - | chr8_1:70331369-70331388 | Msa1210960:three_prime_UTR | 30.0% | |
| AAAGACGATGTTCGTTTAAT+TGG | - | chr8_1:70331580-70331599 | Msa1210960:intron | 30.0% | |
| AACAGTTGTTAATGATGTTC+AGG | - | chr8_1:70331700-70331719 | Msa1210960:CDS | 30.0% | |
| ACATGAGGGAACAAAAATTA+AGG | + | chr8_1:70331802-70331821 | None:intergenic | 30.0% | |
| AATCTCAATTCTTCACAAGA+AGG | - | chr8_1:70332093-70332112 | Msa1210960:intron | 30.0% | |
| TACTTTCGTGATTTAGGTAT+CGG | - | chr8_1:70332207-70332226 | Msa1210960:CDS | 30.0% | |
| ATCTGGGAAAAGTTGAATTA+GGG | + | chr8_1:70332327-70332346 | None:intergenic | 30.0% | |
| ! | TTTCCCAGATCTTTGAAAAA+TGG | - | chr8_1:70332337-70332356 | Msa1210960:CDS | 30.0% |
| !! | GTTACCATTTTTCAAAGATC+TGG | + | chr8_1:70332344-70332363 | None:intergenic | 30.0% |
| TAAGAAAAACTAGAGTAGAG+TGG | - | chr8_1:70332599-70332618 | Msa1210960:intron | 30.0% | |
| ! | GGCGATAATTTGAATTTTTG+AGG | - | chr8_1:70332620-70332639 | Msa1210960:intron | 30.0% |
| !!! | GAATTTTTGAAACATGGGTT+TGG | - | chr8_1:70332659-70332678 | Msa1210960:intron | 30.0% |
| AACCCCAAGTTAACTAAATA+AGG | - | chr8_1:70332795-70332814 | Msa1210960:intron | 30.0% | |
| ACCCCAAGTTAACTAAATAA+GGG | - | chr8_1:70332796-70332815 | Msa1210960:intron | 30.0% | |
| ! | ACCCTTATTTAGTTAACTTG+GGG | + | chr8_1:70332800-70332819 | None:intergenic | 30.0% |
| ! | GAACCCTTATTTAGTTAACT+TGG | + | chr8_1:70332802-70332821 | None:intergenic | 30.0% |
| CAAAAGACATAATACAGGTA+TGG | + | chr8_1:70332982-70333001 | None:intergenic | 30.0% | |
| TGAACAATCTGATGAGAATT+GGG | + | chr8_1:70333053-70333072 | None:intergenic | 30.0% | |
| TTGAACAATCTGATGAGAAT+TGG | + | chr8_1:70333054-70333073 | None:intergenic | 30.0% | |
| ! | TGTTTTCTTTTCTTAGGGTT+AGG | - | chr8_1:70333084-70333103 | Msa1210960:intron | 30.0% |
| ! | TTTAATGTTTTGCAGACAGA+AGG | - | chr8_1:70333304-70333323 | Msa1210960:intron | 30.0% |
| ! | TTAATGTTTTGCAGACAGAA+GGG | - | chr8_1:70333305-70333324 | Msa1210960:intron | 30.0% |
| GCACATTTGCAATATCATAA+AGG | + | chr8_1:70333682-70333701 | None:intergenic | 30.0% | |
| AGTATATTACCTTCTCGATA+AGG | + | chr8_1:70333718-70333737 | None:intergenic | 30.0% | |
| ! | TTTTCTTGTATCTGTGGTAT+GGG | + | chr8_1:70333871-70333890 | None:intergenic | 30.0% |
| ! | AACAAAACGATTCTAGGAAA+AGG | - | chr8_1:70333955-70333974 | Msa1210960:CDS | 30.0% |
| ! | ACAAAACGATTCTAGGAAAA+GGG | - | chr8_1:70333956-70333975 | Msa1210960:CDS | 30.0% |
| ! | AATAGAACAGACTTGTTCAT+GGG | - | chr8_1:70334017-70334036 | Msa1210960:intron | 30.0% |
| ! | CTTTAAGAAGCAAAAGACAA+TGG | - | chr8_1:70334046-70334065 | Msa1210960:intron | 30.0% |
| AAGACAATGGAAAATGATAG+TGG | - | chr8_1:70334059-70334078 | Msa1210960:intron | 30.0% | |
| AGACAATGGAAAATGATAGT+GGG | - | chr8_1:70334060-70334079 | Msa1210960:intron | 30.0% | |
| ACTTCAGCTAACTATCAATT+TGG | - | chr8_1:70334119-70334138 | Msa1210960:CDS | 30.0% | |
| ATGAAAATGCTTAATTGCCT+TGG | + | chr8_1:70334253-70334272 | None:intergenic | 30.0% | |
| TAAAGTTCTTTCAAAGCTGT+AGG | + | chr8_1:70334484-70334503 | None:intergenic | 30.0% | |
| AGAACTTTACTCTCATTACA+TGG | - | chr8_1:70334495-70334514 | Msa1210960:five_prime_UTR | 30.0% | |
| AAAATCCGTACATTCTATGT+TGG | + | chr8_1:70334670-70334689 | None:intergenic | 30.0% | |
| AACGTGCAACCTTATATTAA+AGG | + | chr8_1:70334821-70334840 | None:intergenic | 30.0% | |
| AGAATTCAAATACGAGGTTG+CGG | - | chr8_1:70331007-70331026 | Msa1210960:three_prime_UTR | 35.0% | |
| GGCCGAAATTTGAAAATTGA+TGG | + | chr8_1:70331202-70331221 | None:intergenic | 35.0% | |
| AGCCGTTTAGATATAAAAGG+GGG | + | chr8_1:70331261-70331280 | None:intergenic | 35.0% | |
| GAGCCGTTTAGATATAAAAG+GGG | + | chr8_1:70331262-70331281 | None:intergenic | 35.0% | |
| CAGAGCCGTTTAGATATAAA+AGG | + | chr8_1:70331264-70331283 | None:intergenic | 35.0% | |
| CGATGATGTTGTTCGAATTA+AGG | + | chr8_1:70331296-70331315 | None:intergenic | 35.0% | |
| TTTGTTTACGATCGTAAGTG+TGG | + | chr8_1:70331426-70331445 | None:intergenic | 35.0% | |
| GATCGTAAACAAAAATCCCT+CGG | - | chr8_1:70331433-70331452 | Msa1210960:intron | 35.0% | |
| GAGTAAGAGTAACACTTACT+TGG | + | chr8_1:70331470-70331489 | None:intergenic | 35.0% | |
| AAAAAAAGGTGGGAACATGA+GGG | + | chr8_1:70331816-70331835 | None:intergenic | 35.0% | |
| AAAAAAAAGGTGGGAACATG+AGG | + | chr8_1:70331817-70331836 | None:intergenic | 35.0% | |
| !! | TTTCCAGGTATACTGATTCT+TGG | + | chr8_1:70331910-70331929 | None:intergenic | 35.0% |
| AAGAATCAGTATACCTGGAA+AGG | - | chr8_1:70331909-70331928 | Msa1210960:CDS | 35.0% | |
| !! | TTGAATGGGTTTTTAGGAAG+AGG | - | chr8_1:70332059-70332078 | Msa1210960:intron | 35.0% |
| !! | TGAATGGGTTTTTAGGAAGA+GGG | - | chr8_1:70332060-70332079 | Msa1210960:intron | 35.0% |
| !! | GTTTTTAGGAAGAGGGTTTA+TGG | - | chr8_1:70332067-70332086 | Msa1210960:intron | 35.0% |
| GATCTGGGAAAAGTTGAATT+AGG | + | chr8_1:70332328-70332347 | None:intergenic | 35.0% | |
| !! | TTATGAACCTGTGTTTTTGC+TGG | - | chr8_1:70332396-70332415 | Msa1210960:intron | 35.0% |
| ATTAATGTGTGTGTAGACTG+AGG | + | chr8_1:70332867-70332886 | None:intergenic | 35.0% | |
| ACACACACATTAATACGTTG+TGG | - | chr8_1:70332873-70332892 | Msa1210960:intron | 35.0% | |
| CACACACATTAATACGTTGT+GGG | - | chr8_1:70332874-70332893 | Msa1210960:intron | 35.0% | |
| !! | CGTTGTGGGTTATAGTTTTA+AGG | - | chr8_1:70332888-70332907 | Msa1210960:intron | 35.0% |
| GTGCACAAAAGACATAATAC+AGG | + | chr8_1:70332987-70333006 | None:intergenic | 35.0% | |
| TATAATACTGGAGTCGTATG+TGG | - | chr8_1:70333237-70333256 | Msa1210960:intron | 35.0% | |
| CTTGGAATGAACAAGAAACT+AGG | + | chr8_1:70333397-70333416 | None:intergenic | 35.0% | |
| AACATATCAGATGTATGGCA+TGG | + | chr8_1:70333440-70333459 | None:intergenic | 35.0% | |
| ! | GTTTTCTTGTATCTGTGGTA+TGG | + | chr8_1:70333872-70333891 | None:intergenic | 35.0% |
| ATACAAGAAAACCAGCATTC+AGG | - | chr8_1:70333880-70333899 | Msa1210960:intron | 35.0% | |
| AAAAGGGAAGACATTGAATG+AGG | - | chr8_1:70333914-70333933 | Msa1210960:CDS | 35.0% | |
| ! | GAATAGAACAGACTTGTTCA+TGG | - | chr8_1:70334016-70334035 | Msa1210960:intron | 35.0% |
| TGTGTCTAAGTACACTACAA+TGG | + | chr8_1:70334636-70334655 | None:intergenic | 35.0% | |
| ATGTGCCAACATAGAATGTA+CGG | - | chr8_1:70334662-70334681 | Msa1210960:five_prime_UTR | 35.0% | |
| !!! | ATTTTTTTAGCTGTGACGCT+TGG | - | chr8_1:70334685-70334704 | Msa1210960:five_prime_UTR | 35.0% |
| GTACAGCCTAATCAGATATT+AGG | + | chr8_1:70334711-70334730 | None:intergenic | 35.0% | |
| ATATCTGATTAGGCTGTACT+TGG | - | chr8_1:70334712-70334731 | Msa1210960:five_prime_UTR | 35.0% | |
| TATCTGATTAGGCTGTACTT+GGG | - | chr8_1:70334713-70334732 | Msa1210960:five_prime_UTR | 35.0% | |
| TATAACACCTCTTTGTGCAA+AGG | - | chr8_1:70334744-70334763 | Msa1210960:five_prime_UTR | 35.0% | |
| ATAACACCTCTTTGTGCAAA+GGG | - | chr8_1:70334745-70334764 | Msa1210960:five_prime_UTR | 35.0% | |
| !!! | ATTGGTTTTGCGATTTGCGT+TGG | + | chr8_1:70331151-70331170 | None:intergenic | 40.0% |
| ATAAAAGGGGGAAGAGAAGA+GGG | + | chr8_1:70331249-70331268 | None:intergenic | 40.0% | |
| TATAAAAGGGGGAAGAGAAG+AGG | + | chr8_1:70331250-70331269 | None:intergenic | 40.0% | |
| !! | ACACTTACTTGGTGCATAAG+AGG | + | chr8_1:70331459-70331478 | None:intergenic | 40.0% |
| ! | GTCAATGTTCTCGAAAGCAT+CGG | - | chr8_1:70331751-70331770 | Msa1210960:CDS | 40.0% |
| !! | TCAATGTTCTCGAAAGCATC+GGG | - | chr8_1:70331752-70331771 | Msa1210960:CDS | 40.0% |
| AAGCCAAGAATCAGTATACC+TGG | - | chr8_1:70331904-70331923 | Msa1210960:CDS | 40.0% | |
| ! | GTATACCTGGAAAGGTTTTG+CGG | - | chr8_1:70331917-70331936 | Msa1210960:CDS | 40.0% |
| TTAAGCTCCTGTAAAGCAAC+AGG | + | chr8_1:70331948-70331967 | None:intergenic | 40.0% | |
| !! | TGTTGCTTTACAGGAGCTTA+AGG | - | chr8_1:70331947-70331966 | Msa1210960:CDS | 40.0% |
| CTCAATTCTTCACAAGAAGG+TGG | - | chr8_1:70332096-70332115 | Msa1210960:intron | 40.0% | |
| !! | GATTTAGGTATCGGATGAAG+AGG | - | chr8_1:70332216-70332235 | Msa1210960:intron | 40.0% |
| GAATTGTTATCCCAAACCAC+TGG | - | chr8_1:70332247-70332266 | Msa1210960:intron | 40.0% | |
| TTGTCATTCTGACTTCCAGT+GGG | + | chr8_1:70332298-70332317 | None:intergenic | 40.0% | |
| ATTGTCATTCTGACTTCCAG+TGG | + | chr8_1:70332299-70332318 | None:intergenic | 40.0% | |
| AACAACACCAGCAAAAACAC+AGG | + | chr8_1:70332406-70332425 | None:intergenic | 40.0% | |
| !!! | TTTTGCTGGTGTTGTTGTTG+TGG | - | chr8_1:70332410-70332429 | Msa1210960:intron | 40.0% |
| ! | AGGGTTCAATCCAATTTTGC+TGG | - | chr8_1:70332815-70332834 | Msa1210960:intron | 40.0% |
| ! | GGGTTCAATCCAATTTTGCT+GGG | - | chr8_1:70332816-70332835 | Msa1210960:intron | 40.0% |
| CTATGCTTACCCAGCAAAAT+TGG | + | chr8_1:70332828-70332847 | None:intergenic | 40.0% | |
| ! | CAATTTTGCTGGGTAAGCAT+AGG | - | chr8_1:70332826-70332845 | Msa1210960:intron | 40.0% |
| TGAGAATTGGGATTGTTCTG+AGG | + | chr8_1:70333041-70333060 | None:intergenic | 40.0% | |
| !!! | TTGGCACTGATTGCATTTTG+AGG | - | chr8_1:70333268-70333287 | Msa1210960:intron | 40.0% |
| AGACAGAAGGGAAAAATCTC+TGG | - | chr8_1:70333317-70333336 | Msa1210960:intron | 40.0% | |
| ! | TTTTCACTTACAGTCCCATC+TGG | - | chr8_1:70333635-70333654 | Msa1210960:CDS | 40.0% |
| TACCTTCTCGATAAGGTTCA+TGG | + | chr8_1:70333711-70333730 | None:intergenic | 40.0% | |
| !!! | TGCTGGTTTTCTTGTATCTG+TGG | + | chr8_1:70333877-70333896 | None:intergenic | 40.0% |
| TCACAAACATAAGCTTTGCC+AGG | - | chr8_1:70333994-70334013 | Msa1210960:intron | 40.0% | |
| GAACAAGTCTGTTCTATTCC+TGG | + | chr8_1:70334015-70334034 | None:intergenic | 40.0% | |
| !! | AAATGATAGTGGGCTATGTC+TGG | - | chr8_1:70334070-70334089 | Msa1210960:intron | 40.0% |
| TGTCTGGAAGATGTGAAACA+AGG | - | chr8_1:70334086-70334105 | Msa1210960:intron | 40.0% | |
| ! | CTCTGAGAATAAAGTGAAGC+AGG | - | chr8_1:70334178-70334197 | Msa1210960:intron | 40.0% |
| !!! | TGCCTTGGTTTTGATACTGA+GGG | + | chr8_1:70334238-70334257 | None:intergenic | 40.0% |
| !!! | TTGCCTTGGTTTTGATACTG+AGG | + | chr8_1:70334239-70334258 | None:intergenic | 40.0% |
| ACTCTCATTACATGGAAGCA+TGG | - | chr8_1:70334503-70334522 | Msa1210960:five_prime_UTR | 40.0% | |
| ! | ACATGGAAGCATGGAAATCT+TGG | - | chr8_1:70334512-70334531 | Msa1210960:five_prime_UTR | 40.0% |
| GCTTGGCCTAATATCTGATT+AGG | - | chr8_1:70334702-70334721 | Msa1210960:five_prime_UTR | 40.0% | |
| AGATTTCCCTTTGCACAAAG+AGG | + | chr8_1:70334754-70334773 | None:intergenic | 40.0% | |
| ! | GTTTTGCGATTTGCGTTGGA+GGG | + | chr8_1:70331147-70331166 | None:intergenic | 45.0% |
| !!! | TGGAAGCGAGCGTGTTTTTT+TGG | + | chr8_1:70331182-70331201 | None:intergenic | 45.0% |
| ! | TTTGTGTGTTGAGAGTGTGG+CGG | + | chr8_1:70331224-70331243 | None:intergenic | 45.0% |
| GTGTTTGTGTGTTGAGAGTG+TGG | + | chr8_1:70331227-70331246 | None:intergenic | 45.0% | |
| !! | GTTCAGGTGTTGAGAGAAGA+CGG | - | chr8_1:70331716-70331735 | Msa1210960:CDS | 45.0% |
| !! | CAATGTTCTCGAAAGCATCG+GGG | - | chr8_1:70331753-70331772 | Msa1210960:CDS | 45.0% |
| AATTGCCGCAAAACCTTTCC+AGG | + | chr8_1:70331925-70331944 | None:intergenic | 45.0% | |
| !! | GGCAATTCCTGTTGCTTTAC+AGG | - | chr8_1:70331938-70331957 | Msa1210960:CDS | 45.0% |
| AGGTGGCAATGAAGATGTGA+AGG | - | chr8_1:70332113-70332132 | Msa1210960:intron | 45.0% | |
| ! | ATTCTGACTTCCAGTGGGTT+GGG | + | chr8_1:70332293-70332312 | None:intergenic | 45.0% |
| GTCGTATGTGGACTTAGACT+TGG | - | chr8_1:70333249-70333268 | Msa1210960:intron | 45.0% | |
| !! | TATCCCTTGATGATGCAGCA+AGG | - | chr8_1:70333507-70333526 | Msa1210960:intron | 45.0% |
| CAACCTTGCTGCATCATCAA+GGG | + | chr8_1:70333513-70333532 | None:intergenic | 45.0% | |
| ACAACCTTGCTGCATCATCA+AGG | + | chr8_1:70333514-70333533 | None:intergenic | 45.0% | |
| CTTCTCGATAAGGTTCATGG+AGG | + | chr8_1:70333708-70333727 | None:intergenic | 45.0% | |
| CTCCATGAACCTTATCGAGA+AGG | - | chr8_1:70333706-70333725 | Msa1210960:intron | 45.0% | |
| CAAGAAAACCAGCATTCAGG+TGG | - | chr8_1:70333883-70333902 | Msa1210960:intron | 45.0% | |
| TTCAGGTGGCTAGGCTTAAA+AGG | - | chr8_1:70333897-70333916 | Msa1210960:intron | 45.0% | |
| TCAGGTGGCTAGGCTTAAAA+GGG | - | chr8_1:70333898-70333917 | Msa1210960:intron | 45.0% | |
| !! | GATTCTAGGAAAAGGGCGTT+TGG | - | chr8_1:70333963-70333982 | Msa1210960:CDS | 45.0% |
| ! | AGAACAGACTTGTTCATGGG+TGG | - | chr8_1:70334020-70334039 | Msa1210960:intron | 45.0% |
| GATACAAAGGCAGGAGCAAA+AGG | + | chr8_1:70334146-70334165 | None:intergenic | 45.0% | |
| !! | GCTTCCAGCTTTGGATACAA+AGG | + | chr8_1:70334159-70334178 | None:intergenic | 45.0% |
| ATTCTCAGAGCTTCCAGCTT+TGG | + | chr8_1:70334168-70334187 | None:intergenic | 45.0% | |
| TGCCCTCAGTATCAAAACCA+AGG | - | chr8_1:70334233-70334252 | Msa1210960:intron | 45.0% | |
| !! | TCTTGGTACTCTGAAGTTGC+TGG | - | chr8_1:70334529-70334548 | Msa1210960:five_prime_UTR | 45.0% |
| !! | CTTGGTACTCTGAAGTTGCT+GGG | - | chr8_1:70334530-70334549 | Msa1210960:five_prime_UTR | 45.0% |
| !! | AAAAAAAAAATAAAACAAAT+TGG | - | chr8_1:70331668-70331687 | Msa1210960:CDS | 5.0% |
| ! | GGTTTTGCGATTTGCGTTGG+AGG | + | chr8_1:70331148-70331167 | None:intergenic | 50.0% |
| ! | TTGTGTGTTGAGAGTGTGGC+GGG | + | chr8_1:70331223-70331242 | None:intergenic | 50.0% |
| !! | TAAGTGTGGTGTCGTGAAGG+AGG | + | chr8_1:70331412-70331431 | None:intergenic | 50.0% |
| !! | TCGTAAGTGTGGTGTCGTGA+AGG | + | chr8_1:70331415-70331434 | None:intergenic | 50.0% |
| ! | GGTATCGGATGAAGAGGATG+AGG | - | chr8_1:70332222-70332241 | Msa1210960:intron | 50.0% |
| ATCCCAAACCACTGGAAGTC+AGG | - | chr8_1:70332255-70332274 | Msa1210960:intron | 50.0% | |
| TCCCAAACCACTGGAAGTCA+GGG | - | chr8_1:70332256-70332275 | Msa1210960:intron | 50.0% | |
| ACCCTGACTTCCAGTGGTTT+GGG | + | chr8_1:70332260-70332279 | None:intergenic | 50.0% | |
| TGATTCACCCTGACTTCCAG+TGG | + | chr8_1:70332266-70332285 | None:intergenic | 50.0% | |
| GAATCACTATCCCAACCCAC+TGG | - | chr8_1:70332280-70332299 | Msa1210960:intron | 50.0% | |
| CATTCTGACTTCCAGTGGGT+TGG | + | chr8_1:70332294-70332313 | None:intergenic | 50.0% | |
| TAACCACTCTACTCTGCAGC+TGG | - | chr8_1:70333478-70333497 | Msa1210960:intron | 50.0% | |
| TTTCCAGCTGCAGAGTAGAG+TGG | + | chr8_1:70333484-70333503 | None:intergenic | 50.0% | |
| GATGCAGCAAGGTTGTTGCT+TGG | - | chr8_1:70333518-70333537 | Msa1210960:intron | 50.0% | |
| ! | CTTTTGCTGCAAGGCCAGAT+GGG | + | chr8_1:70333652-70333671 | None:intergenic | 50.0% |
| ! | ACTTTTGCTGCAAGGCCAGA+TGG | + | chr8_1:70333653-70333672 | None:intergenic | 50.0% |
| !! | CTGGCCTTGCAGCAAAAGTT+AGG | - | chr8_1:70333654-70333673 | Msa1210960:intron | 50.0% |
| AAACCAGCATTCAGGTGGCT+AGG | - | chr8_1:70333888-70333907 | Msa1210960:intron | 50.0% | |
| !! | CCAGCTTTGGATACAAAGGC+AGG | + | chr8_1:70334155-70334174 | None:intergenic | 50.0% |
| CCTGCCTTTGTATCCAAAGC+TGG | - | chr8_1:70334152-70334171 | Msa1210960:intron | 50.0% | |
| AAGTGAAGCAGGTGCATGAC+TGG | - | chr8_1:70334189-70334208 | Msa1210960:intron | 50.0% | |
| AGTGAAGCAGGTGCATGACT+GGG | - | chr8_1:70334190-70334209 | Msa1210960:intron | 50.0% | |
| !! | ACTCTGAAGTTGCTGGGAAG+AGG | - | chr8_1:70334536-70334555 | Msa1210960:five_prime_UTR | 50.0% |
| TTGCGATTTGCGTTGGAGGG+AGG | + | chr8_1:70331144-70331163 | None:intergenic | 55.0% | |
| ATCGGAGGAAGAAGCAGCCA+TGG | + | chr8_1:70331389-70331408 | None:intergenic | 55.0% | |
| !! | GTGGTGTCGTGAAGGAGGAT+CGG | + | chr8_1:70331407-70331426 | None:intergenic | 55.0% |
| ! | CTTGGTGCATAAGAGGCCGA+GGG | + | chr8_1:70331452-70331471 | None:intergenic | 55.0% |
| !! | ACTTGGTGCATAAGAGGCCG+AGG | + | chr8_1:70331453-70331472 | None:intergenic | 55.0% |
| GACGATGCTGCCGCCAAATT+AGG | - | chr8_1:70331607-70331626 | Msa1210960:exon | 55.0% | |
| CACCCTGACTTCCAGTGGTT+TGG | + | chr8_1:70332261-70332280 | None:intergenic | 55.0% | |
| TGCTGGGTAAGCATAGGTCG+AGG | - | chr8_1:70332832-70332851 | Msa1210960:intron | 55.0% | |
| GCTGGGTAAGCATAGGTCGA+GGG | - | chr8_1:70332833-70332852 | Msa1210960:intron | 55.0% | |
| CTGGGTAAGCATAGGTCGAG+GGG | - | chr8_1:70332834-70332853 | Msa1210960:intron | 55.0% | |
| ! | GGCGCCTAACTTTTGCTGCA+AGG | + | chr8_1:70333661-70333680 | None:intergenic | 55.0% |
| AAGCCTAGCCACCTGAATGC+TGG | + | chr8_1:70333894-70333913 | None:intergenic | 55.0% | |
| GTGTCGTGAAGGAGGATCGG+AGG | + | chr8_1:70331404-70331423 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 70330991 | 70334886 | 70330991 | ID=Msa1210960;Name=Msa1210960 |
| chr8_1 | mRNA | 70330991 | 70334886 | 70330991 | ID=Msa1210960-mRNA-1;Parent=Msa1210960;Name=Msa1210960-mRNA-1;_AED=0.14;_eAED=0.14;_QI=397|1|1|1|0.9|0.81|11|420|363 |
| chr8_1 | exon | 70330991 | 70331389 | 70330991 | ID=Msa1210960-mRNA-1:exon:23544;Parent=Msa1210960-mRNA-1 |
| chr8_1 | exon | 70331594 | 70332010 | 70331594 | ID=Msa1210960-mRNA-1:exon:23543;Parent=Msa1210960-mRNA-1 |
| chr8_1 | exon | 70332150 | 70332229 | 70332150 | ID=Msa1210960-mRNA-1:exon:23542;Parent=Msa1210960-mRNA-1 |
| chr8_1 | exon | 70332308 | 70332380 | 70332308 | ID=Msa1210960-mRNA-1:exon:23541;Parent=Msa1210960-mRNA-1 |
| chr8_1 | exon | 70332494 | 70332558 | 70332494 | ID=Msa1210960-mRNA-1:exon:23540;Parent=Msa1210960-mRNA-1 |
| chr8_1 | exon | 70333519 | 70333654 | 70333519 | ID=Msa1210960-mRNA-1:exon:23539;Parent=Msa1210960-mRNA-1 |
| chr8_1 | exon | 70333743 | 70333802 | 70333743 | ID=Msa1210960-mRNA-1:exon:23538;Parent=Msa1210960-mRNA-1 |
| chr8_1 | exon | 70333909 | 70333986 | 70333909 | ID=Msa1210960-mRNA-1:exon:23537;Parent=Msa1210960-mRNA-1 |
| chr8_1 | exon | 70334103 | 70334155 | 70334103 | ID=Msa1210960-mRNA-1:exon:23536;Parent=Msa1210960-mRNA-1 |
| chr8_1 | exon | 70334249 | 70334316 | 70334249 | ID=Msa1210960-mRNA-1:exon:23535;Parent=Msa1210960-mRNA-1 |
| chr8_1 | exon | 70334407 | 70334886 | 70334407 | ID=Msa1210960-mRNA-1:exon:23534;Parent=Msa1210960-mRNA-1 |
| chr8_1 | five_prime_UTR | 70334490 | 70334886 | 70334490 | ID=Msa1210960-mRNA-1:five_prime_utr;Parent=Msa1210960-mRNA-1 |
| chr8_1 | CDS | 70334407 | 70334489 | 70334407 | ID=Msa1210960-mRNA-1:cds;Parent=Msa1210960-mRNA-1 |
| chr8_1 | CDS | 70334249 | 70334316 | 70334249 | ID=Msa1210960-mRNA-1:cds;Parent=Msa1210960-mRNA-1 |
| chr8_1 | CDS | 70334103 | 70334155 | 70334103 | ID=Msa1210960-mRNA-1:cds;Parent=Msa1210960-mRNA-1 |
| chr8_1 | CDS | 70333909 | 70333986 | 70333909 | ID=Msa1210960-mRNA-1:cds;Parent=Msa1210960-mRNA-1 |
| chr8_1 | CDS | 70333743 | 70333802 | 70333743 | ID=Msa1210960-mRNA-1:cds;Parent=Msa1210960-mRNA-1 |
| chr8_1 | CDS | 70333519 | 70333654 | 70333519 | ID=Msa1210960-mRNA-1:cds;Parent=Msa1210960-mRNA-1 |
| chr8_1 | CDS | 70332494 | 70332558 | 70332494 | ID=Msa1210960-mRNA-1:cds;Parent=Msa1210960-mRNA-1 |
| chr8_1 | CDS | 70332308 | 70332380 | 70332308 | ID=Msa1210960-mRNA-1:cds;Parent=Msa1210960-mRNA-1 |
| chr8_1 | CDS | 70332150 | 70332229 | 70332150 | ID=Msa1210960-mRNA-1:cds;Parent=Msa1210960-mRNA-1 |
| chr8_1 | CDS | 70331615 | 70332010 | 70331615 | ID=Msa1210960-mRNA-1:cds;Parent=Msa1210960-mRNA-1 |
| chr8_1 | three_prime_UTR | 70331594 | 70331614 | 70331594 | ID=Msa1210960-mRNA-1:three_prime_utr;Parent=Msa1210960-mRNA-1 |
| chr8_1 | three_prime_UTR | 70330991 | 70331389 | 70330991 | ID=Msa1210960-mRNA-1:three_prime_utr;Parent=Msa1210960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
