Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299090 | XP_024636098.1 | 98.352 | 364 | 5 | 1 | 1 | 363 | 1 | 364 | 0.0 | 738 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299090 | sp|Q8LSZ4|E2FE_ARATH | 53.297 | 364 | 134 | 12 | 12 | 361 | 29 | 370 | 3.39e-106 | 320 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299090 | G7JNS5 | 98.352 | 364 | 5 | 1 | 1 | 363 | 1 | 364 | 0.0 | 738 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1299090 | TF | E2F-DP |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0184700 | Msa1299090 | 0.800595 | 1.338701e-48 | -8.615850e-47 |
| Msa1210960 | Msa1299090 | 0.917581 | 4.458858e-86 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299090 | MtrunA17_Chr4g0059551 | 96.143 | 363 | 7 | 2 | 1 | 362 | 1 | 357 | 0.0 | 714 |
| Msa1299090 | MtrunA17_Chr4g0025881 | 46.269 | 67 | 36 | 0 | 17 | 83 | 138 | 204 | 3.88e-12 | 67.4 |
| Msa1299090 | MtrunA17_Chr3g0142581 | 46.377 | 69 | 37 | 0 | 14 | 82 | 99 | 167 | 1.13e-11 | 65.5 |
| Msa1299090 | MtrunA17_Chr1g0177351 | 44.776 | 67 | 37 | 0 | 17 | 83 | 142 | 208 | 2.63e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1299090 | AT3G48160.1 | 53.825 | 366 | 131 | 13 | 12 | 362 | 29 | 371 | 5.91e-109 | 324 |
| Msa1299090 | AT3G48160.2 | 53.297 | 364 | 134 | 12 | 12 | 361 | 29 | 370 | 3.45e-107 | 320 |
| Msa1299090 | AT3G01330.1 | 46.705 | 349 | 151 | 6 | 13 | 361 | 17 | 330 | 4.32e-92 | 280 |
| Msa1299090 | AT5G14960.1 | 40.503 | 358 | 171 | 9 | 13 | 360 | 9 | 334 | 5.03e-77 | 241 |
| Msa1299090 | AT5G14960.2 | 35.945 | 217 | 116 | 6 | 154 | 360 | 38 | 241 | 9.31e-32 | 120 |
| Msa1299090 | AT5G22220.2 | 44.776 | 67 | 37 | 0 | 17 | 83 | 129 | 195 | 4.60e-11 | 64.3 |
| Msa1299090 | AT5G22220.3 | 44.776 | 67 | 37 | 0 | 17 | 83 | 129 | 195 | 4.83e-11 | 64.3 |
Find 121 sgRNAs with CRISPR-Local
Find 243 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCTGGGAAAAGTTGAATT+AGG | 0.171110 | 8_3:-60074782 | None:intergenic |
| GAGAGATGTTTGATGAATTA+AGG | 0.183601 | 8_3:-60073797 | None:intergenic |
| TGGATCTGAAATTCGAAATT+TGG | 0.191238 | 8_3:-60073830 | None:intergenic |
| AAAGACGATGTTCGTTTAAT+TGG | 0.211016 | 8_3:+60074044 | Msa1299090:CDS |
| CACCCTGACTTCCAGTGGTT+TGG | 0.211662 | 8_3:-60074715 | None:intergenic |
| GGCAATTCCTGTTGCTTTAC+AGG | 0.216414 | 8_3:+60074395 | Msa1299090:CDS |
| TTCAGGTGGCTAGGCTTAAA+AGG | 0.224076 | 8_3:+60076354 | Msa1299090:CDS |
| CGATGATGTTGTTCGAATTA+AGG | 0.234552 | 8_3:-60073757 | None:intergenic |
| GACGATGCTGCCGCCAAATT+AGG | 0.253633 | 8_3:+60074071 | Msa1299090:CDS |
| GTAATAATGAATACCTAATT+TGG | 0.256592 | 8_3:-60074084 | None:intergenic |
| CTTAATATACCTTCAATATA+AGG | 0.267242 | 8_3:+60077266 | Msa1299090:three_prime_UTR |
| CAGAGCCGTTTAGATATAAA+AGG | 0.269147 | 8_3:-60073725 | None:intergenic |
| ATTCAAAACAAAACGATTCT+AGG | 0.280464 | 8_3:+60076406 | Msa1299090:CDS |
| TTTCCAGGTATACTGATTCT+TGG | 0.296038 | 8_3:-60074364 | None:intergenic |
| ACCCTGACTTCCAGTGGTTT+GGG | 0.311184 | 8_3:-60074714 | None:intergenic |
| ATCTGGGAAAAGTTGAATTA+GGG | 0.323897 | 8_3:-60074781 | None:intergenic |
| AATTGCCGCAAAACCTTTCC+AGG | 0.340573 | 8_3:-60074379 | None:intergenic |
| TACCTTCTCGATAAGGTTCA+TGG | 0.347489 | 8_3:-60076165 | None:intergenic |
| TGTTGCTTTACAGGAGCTTA+AGG | 0.369256 | 8_3:+60074404 | Msa1299090:CDS |
| ATTCTCAGAGCTTCCAGCTT+TGG | 0.369624 | 8_3:-60076622 | None:intergenic |
| ATCCCAAACCACTGGAAGTC+AGG | 0.370120 | 8_3:+60074712 | Msa1299090:CDS |
| ATTCTGACTTCCAGTGGGTT+GGG | 0.370825 | 8_3:-60074747 | None:intergenic |
| ACTTCAGCTAACTATCAATT+TGG | 0.373900 | 8_3:+60076576 | Msa1299090:CDS |
| GGCCGAAATTTGAAAATTGA+TGG | 0.374089 | 8_3:-60073672 | None:intergenic |
| CATTCTGACTTCCAGTGGGT+TGG | 0.380743 | 8_3:-60074748 | None:intergenic |
| TTCATGGATAGATAGATAGA+TGG | 0.386470 | 8_3:-60073513 | None:intergenic |
| GAACAAGTCTGTTCTATTCC+TGG | 0.392480 | 8_3:-60076469 | None:intergenic |
| ATGAAAATGCTTAATTGCCT+TGG | 0.399936 | 8_3:-60076707 | None:intergenic |
| TCAATGTTCTCGAAAGCATC+GGG | 0.403367 | 8_3:+60074215 | Msa1299090:CDS |
| GTACAGCCTAATCAGATATT+AGG | 0.403736 | 8_3:-60077165 | None:intergenic |
| AAGTGAAGCAGGTGCATGAC+TGG | 0.407996 | 8_3:+60076646 | Msa1299090:CDS |
| AGTATATTACCTTCTCGATA+AGG | 0.412345 | 8_3:-60076172 | None:intergenic |
| TCTTGGTACTCTGAAGTTGC+TGG | 0.425848 | 8_3:+60076986 | Msa1299090:three_prime_UTR |
| ACATGGAAGCATGGAAATCT+TGG | 0.426073 | 8_3:+60076969 | Msa1299090:three_prime_UTR |
| AACAAAACGATTCTAGGAAA+AGG | 0.426966 | 8_3:+60076412 | Msa1299090:CDS |
| ATATCTGATTAGGCTGTACT+TGG | 0.428901 | 8_3:+60077169 | Msa1299090:three_prime_UTR |
| GCACATTTGCAATATCATAA+AGG | 0.434271 | 8_3:-60076136 | None:intergenic |
| GATTCTAGGAAAAGGGCGTT+TGG | 0.443366 | 8_3:+60076420 | Msa1299090:CDS |
| TTAAGCTCCTGTAAAGCAAC+AGG | 0.443519 | 8_3:-60074402 | None:intergenic |
| ATACAAGAAAACCAGCATTC+AGG | 0.443643 | 8_3:+60076337 | Msa1299090:CDS |
| AAATGATAGTGGGCTATGTC+TGG | 0.446224 | 8_3:+60076527 | Msa1299090:CDS |
| CTGGCCTTGCAGCAAAAGTT+AGG | 0.448266 | 8_3:+60076111 | Msa1299090:CDS |
| ATCACACCTCTTTGTGCAAA+GGG | 0.451691 | 8_3:+60077202 | Msa1299090:three_prime_UTR |
| AACGTGCAACCTTATATTGA+AGG | 0.458845 | 8_3:-60077275 | None:intergenic |
| AAGACAATGGAAAATGATAG+TGG | 0.463413 | 8_3:+60076516 | Msa1299090:CDS |
| GATACAAAGGCAGGAGCAAA+AGG | 0.470114 | 8_3:-60076600 | None:intergenic |
| AAGCCTAGCCACCTGAATGC+TGG | 0.489317 | 8_3:-60076348 | None:intergenic |
| CTCTGAGAATAAAGTGAAGC+AGG | 0.496045 | 8_3:+60076635 | Msa1299090:CDS |
| AATTTCGAATTTCAGATCCA+TGG | 0.497190 | 8_3:+60073833 | Msa1299090:exon |
| ACAAAACGATTCTAGGAAAA+GGG | 0.498407 | 8_3:+60076413 | Msa1299090:CDS |
| ACACTTACTTGGTGCATAAG+AGG | 0.500577 | 8_3:-60073920 | None:intergenic |
| CCTGCCTTTGTATCCAAAGC+TGG | 0.506957 | 8_3:+60076609 | Msa1299090:CDS |
| GAATAGAACAGACTTGTTCA+TGG | 0.511403 | 8_3:+60076473 | Msa1299090:CDS |
| AGAGCCGTTTAGATATAAAA+GGG | 0.513466 | 8_3:-60073724 | None:intergenic |
| ACAACCTTGCTGCATCATCA+AGG | 0.524403 | 8_3:-60075968 | None:intergenic |
| AAGCCAAGAATCAGTATACC+TGG | 0.526713 | 8_3:+60074361 | Msa1299090:CDS |
| AAAATCCGTACATTCTATGT+TGG | 0.531566 | 8_3:-60077124 | None:intergenic |
| AGAGGGTGTTTGTGTGTGGC+GGG | 0.533655 | 8_3:-60073693 | None:intergenic |
| AGATTTCCCTTTGCACAAAG+AGG | 0.535412 | 8_3:-60077208 | None:intergenic |
| ACTTGGTGCATAAGAGGCCG+AGG | 0.537885 | 8_3:-60073914 | None:intergenic |
| AATCTCAATTCTTCACAAGA+AGG | 0.539424 | 8_3:+60074550 | Msa1299090:CDS |
| ACTCTGAAGTTGCTGGGAAG+AGG | 0.539687 | 8_3:+60076993 | Msa1299090:three_prime_UTR |
| GTCAATGTTCTCGAAAGCAT+CGG | 0.541833 | 8_3:+60074214 | Msa1299090:CDS |
| GCTTGGCCTAATATCTGATT+AGG | 0.543869 | 8_3:+60077159 | Msa1299090:three_prime_UTR |
| TCACAAACATAAGCTTTGCC+AGG | 0.545422 | 8_3:+60076451 | Msa1299090:CDS |
| AAGAATCAGTATACCTGGAA+AGG | 0.546799 | 8_3:+60074366 | Msa1299090:CDS |
| TTGCGATTTGCGTTGGAGGG+AGG | 0.548686 | 8_3:-60073614 | None:intergenic |
| ATGTGCCAACATAGAATGTA+CGG | 0.549625 | 8_3:+60077119 | Msa1299090:three_prime_UTR |
| GATGCAGCAAGGTTGTTGCT+TGG | 0.550005 | 8_3:+60075975 | Msa1299090:CDS |
| CCAGCTTTGGATACAAAGGC+AGG | 0.550221 | 8_3:-60076609 | None:intergenic |
| ATCTGAAATTCGAAATTTGG+AGG | 0.550384 | 8_3:-60073827 | None:intergenic |
| ATCGGAGGAAGAAGCAGCCA+TGG | 0.550392 | 8_3:-60073850 | None:intergenic |
| ATTGTCATTCTGACTTCCAG+TGG | 0.553060 | 8_3:-60074753 | None:intergenic |
| AAGAGGGTGTTTGTGTGTGG+CGG | 0.559507 | 8_3:-60073694 | None:intergenic |
| AAACCAGCATTCAGGTGGCT+AGG | 0.559723 | 8_3:+60076345 | Msa1299090:CDS |
| TCGTAAGTGTGGTGTCGTGA+AGG | 0.561541 | 8_3:-60073876 | None:intergenic |
| TTGTCATTCTGACTTCCAGT+GGG | 0.561775 | 8_3:-60074752 | None:intergenic |
| TCAGGTGGCTAGGCTTAAAA+GGG | 0.561931 | 8_3:+60076355 | Msa1299090:CDS |
| AGAACTGTACTCTCATTACA+TGG | 0.563209 | 8_3:+60076952 | Msa1299090:three_prime_UTR |
| CTCCATGAACCTTATCGAGA+AGG | 0.564896 | 8_3:+60076163 | Msa1299090:CDS |
| TATCACACCTCTTTGTGCAA+AGG | 0.568141 | 8_3:+60077201 | Msa1299090:three_prime_UTR |
| CTTGGTACTCTGAAGTTGCT+GGG | 0.568986 | 8_3:+60076987 | Msa1299090:three_prime_UTR |
| GGTAACCCTAATGGAAGTGA+TGG | 0.570404 | 8_3:+60073452 | None:intergenic |
| AGAATTCAAATACGAGGTTG+CGG | 0.578791 | 8_3:+60073480 | Msa1299090:five_prime_UTR |
| GTTCAGGTGTTGAGAGAAGA+CGG | 0.579277 | 8_3:+60074179 | Msa1299090:intron |
| TCCCAAACCACTGGAAGTCA+GGG | 0.581818 | 8_3:+60074713 | Msa1299090:CDS |
| TCTGAAATTCGAAATTTGGA+GGG | 0.584453 | 8_3:-60073826 | None:intergenic |
| ATAATGAATACCTAATTTGG+CGG | 0.587773 | 8_3:-60074081 | None:intergenic |
| GCTTCCAGCTTTGGATACAA+AGG | 0.589316 | 8_3:-60076613 | None:intergenic |
| GGTATCGGATGAAGAGGATG+AGG | 0.589877 | 8_3:+60074679 | Msa1299090:intron |
| TGATTCACCCTGACTTCCAG+TGG | 0.592103 | 8_3:-60074720 | None:intergenic |
| AAAAGGGAAGACATTGAATG+AGG | 0.592429 | 8_3:+60076371 | Msa1299090:CDS |
| AGTGAAGCAGGTGCATGACT+GGG | 0.592595 | 8_3:+60076647 | Msa1299090:CDS |
| GATTTAGGTATCGGATGAAG+AGG | 0.593110 | 8_3:+60074673 | Msa1299090:intron |
| TTTGTTTACGATCGTAAGTG+TGG | 0.596230 | 8_3:-60073887 | None:intergenic |
| AATAGAACAGACTTGTTCAT+GGG | 0.597678 | 8_3:+60076474 | Msa1299090:CDS |
| GTGGTGTCGTGAAGGAGGAT+CGG | 0.598361 | 8_3:-60073868 | None:intergenic |
| CAACCTTGCTGCATCATCAA+GGG | 0.604844 | 8_3:-60075967 | None:intergenic |
| CTCAATTCTTCACAAGAAGG+TGG | 0.607030 | 8_3:+60074553 | Msa1299090:CDS |
| CTTGGTGCATAAGAGGCCGA+GGG | 0.608163 | 8_3:-60073913 | None:intergenic |
| AGACAATGGAAAATGATAGT+GGG | 0.608266 | 8_3:+60076517 | Msa1299090:CDS |
| GAGAAGAGGGTGTTTGTGTG+TGG | 0.617453 | 8_3:-60073697 | None:intergenic |
| GAATCACTATCCCAACCCAC+TGG | 0.620440 | 8_3:+60074737 | Msa1299090:CDS |
| GAATTGTTATCCCAAACCAC+TGG | 0.620803 | 8_3:+60074704 | Msa1299090:CDS |
| ACTCTCATTACATGGAAGCA+TGG | 0.624397 | 8_3:+60076960 | Msa1299090:three_prime_UTR |
| TAAGTGTGGTGTCGTGAAGG+AGG | 0.625428 | 8_3:-60073873 | None:intergenic |
| CTTTAAGAAGCAAAAGACAA+TGG | 0.627305 | 8_3:+60076503 | Msa1299090:CDS |
| AGGTGGCAATGAAGATGTGA+AGG | 0.635108 | 8_3:+60074570 | Msa1299090:CDS |
| TGTGTCTAAGTACACTACAA+TGG | 0.635405 | 8_3:-60077090 | None:intergenic |
| CAAGAAAACCAGCATTCAGG+TGG | 0.647844 | 8_3:+60076340 | Msa1299090:CDS |
| TATCTGATTAGGCTGTACTT+GGG | 0.658236 | 8_3:+60077170 | Msa1299090:three_prime_UTR |
| TGCCCTCAGTATCAAAACCA+AGG | 0.661299 | 8_3:+60076690 | Msa1299090:CDS |
| GTGTCGTGAAGGAGGATCGG+AGG | 0.668512 | 8_3:-60073865 | None:intergenic |
| GAGCCGTTTAGATATAAAAG+GGG | 0.668908 | 8_3:-60073723 | None:intergenic |
| CTTCTCGATAAGGTTCATGG+AGG | 0.669999 | 8_3:-60076162 | None:intergenic |
| AGAACAGACTTGTTCATGGG+TGG | 0.672206 | 8_3:+60076477 | Msa1299090:CDS |
| TGTCTGGAAGATGTGAAACA+AGG | 0.683639 | 8_3:+60076543 | Msa1299090:CDS |
| AGCCGTTTAGATATAAAAGG+GGG | 0.695293 | 8_3:-60073722 | None:intergenic |
| CAATGTTCTCGAAAGCATCG+GGG | 0.717872 | 8_3:+60074216 | Msa1299090:CDS |
| TATCCCTTGATGATGCAGCA+AGG | 0.728015 | 8_3:+60075964 | Msa1299090:CDS |
| GATAAGAGAATTCAAATACG+AGG | 0.763019 | 8_3:+60073474 | Msa1299090:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAAAAAAAAAAAAACAAAT+TGG | + | chr8_3:60074131-60074150 | Msa1299090:intron | 10.0% |
| !! | AATTAATAAAAAAAAAAGGT+GGG | - | chr8_3:60074289-60074308 | None:intergenic | 10.0% |
| !! | AAATTAATAAAAAAAAAAGG+TGG | - | chr8_3:60074290-60074309 | None:intergenic | 10.0% |
| !!! | TTTTATTAATTTTTGTTCAT+CGG | + | chr8_3:60074298-60074317 | Msa1299090:intron | 10.0% |
| !!! | GATATTTTTAAATCATTAAA+AGG | - | chr8_3:60075018-60075037 | None:intergenic | 10.0% |
| !! | TTATAAAATTCAATAAACAA+TGG | - | chr8_3:60075679-60075698 | None:intergenic | 10.0% |
| !!! | TTTATTGAATTTTATAATAC+TGG | + | chr8_3:60075682-60075701 | Msa1299090:intron | 10.0% |
| !!! | TAGATTCTTTATTAATTTTA+TGG | + | chr8_3:60077297-60077316 | Msa1299090:three_prime_UTR | 10.0% |
| !!! | AGATTCTTTATTAATTTTAT+GGG | + | chr8_3:60077298-60077317 | Msa1299090:three_prime_UTR | 10.0% |
| !!! | TCACTAATTATTTATTGATT+CGG | + | chr8_3:60073988-60074007 | Msa1299090:intron | 15.0% |
| !!! | TATTTTGTTTGGTTTTTTTT+AGG | + | chr8_3:60074326-60074345 | Msa1299090:intron | 15.0% |
| !!! | TTAAGGTAATTTCAAATTTT+AGG | + | chr8_3:60074421-60074440 | Msa1299090:intron | 15.0% |
| !!! | TAATTGTTTTGATTTTGAAT+GGG | + | chr8_3:60074502-60074521 | Msa1299090:intron | 15.0% |
| !!! | ATTTTTATGAGAAGTATAAT+TGG | + | chr8_3:60074620-60074639 | Msa1299090:intron | 15.0% |
| !!! | AAATGGTAACTTTTTTATTT+TGG | + | chr8_3:60074811-60074830 | Msa1299090:intron | 15.0% |
| !!! | AATGGTAACTTTTTTATTTT+GGG | + | chr8_3:60074812-60074831 | Msa1299090:intron | 15.0% |
| !!! | TTTTGTTTTTCTTCAAATTT+TGG | + | chr8_3:60074979-60074998 | Msa1299090:intron | 15.0% |
| !!! | TTTGTTTTTCTTCAAATTTT+GGG | + | chr8_3:60074980-60074999 | Msa1299090:intron | 15.0% |
| !!! | AATATAAAATGAAAAGTGTA+AGG | - | chr8_3:60076198-60076217 | None:intergenic | 15.0% |
| !!! | TTTACTGTTTTGTTTTTTCA+TGG | - | chr8_3:60073532-60073551 | None:intergenic | 20.0% |
| !!! | TAAAATCTTTTTCAGTTAAG+CGG | - | chr8_3:60073568-60073587 | None:intergenic | 20.0% |
| !!! | TTCCATCAATTTTCAAATTT+CGG | + | chr8_3:60073670-60073689 | Msa1299090:five_prime_UTR | 20.0% |
| !! | GTAATAATGAATACCTAATT+TGG | - | chr8_3:60074087-60074106 | None:intergenic | 20.0% |
| !! | TCACAGAATTTAAATTAAGA+AGG | - | chr8_3:60074455-60074474 | None:intergenic | 20.0% |
| !!! | GTAATTGTTTTGATTTTGAA+TGG | + | chr8_3:60074501-60074520 | Msa1299090:intron | 20.0% |
| !! | AGAAGAATAAACTGTAAATA+TGG | - | chr8_3:60074934-60074953 | None:intergenic | 20.0% |
| !! | TATTCTTCTAAATGCATTAT+AGG | + | chr8_3:60074945-60074964 | Msa1299090:intron | 20.0% |
| !! | TTAACTAAATTATCATTCTC+TGG | - | chr8_3:60075641-60075660 | None:intergenic | 20.0% |
| !! | CTTAATATACCTTCAATATA+AGG | + | chr8_3:60077266-60077285 | Msa1299090:three_prime_UTR | 20.0% |
| !!! | ATTAATTTTATGGGTCAAAT+TGG | + | chr8_3:60077307-60077326 | Msa1299090:three_prime_UTR | 20.0% |
| !!! | AAAATCTTTTTCAGTTAAGC+GGG | - | chr8_3:60073567-60073586 | None:intergenic | 25.0% |
| !!! | GTTTTTTTGGATCCAAAAAT+TGG | - | chr8_3:60073642-60073661 | None:intergenic | 25.0% |
| ! | ATAATGAATACCTAATTTGG+CGG | - | chr8_3:60074084-60074103 | None:intergenic | 25.0% |
| !!! | CATCGGTTTTTTATTTTGTT+TGG | + | chr8_3:60074315-60074334 | Msa1299090:intron | 25.0% |
| !!! | TTGATTTTGAATGGGTTTTT+AGG | + | chr8_3:60074510-60074529 | Msa1299090:intron | 25.0% |
| !! | AGAAGTATAATTGGTTTAGT+AGG | + | chr8_3:60074629-60074648 | Msa1299090:intron | 25.0% |
| !! | GAAGTATAATTGGTTTAGTA+GGG | + | chr8_3:60074630-60074649 | Msa1299090:intron | 25.0% |
| ! | TTTAAGTACTTTCGTGATTT+AGG | + | chr8_3:60074658-60074677 | Msa1299090:intron | 25.0% |
| !!! | TTACCATTTTTCAAAGATCT+GGG | - | chr8_3:60074800-60074819 | None:intergenic | 25.0% |
| !!! | ATAGCAGAATTTTTGAAACA+TGG | + | chr8_3:60075110-60075129 | Msa1299090:intron | 25.0% |
| !!! | TAGCAGAATTTTTGAAACAT+GGG | + | chr8_3:60075111-60075130 | Msa1299090:intron | 25.0% |
| ! | TGCAATTTGCAAATTAAAGT+TGG | - | chr8_3:60075169-60075188 | None:intergenic | 25.0% |
| !! | AACCCTTATTTAGTTAACTT+GGG | - | chr8_3:60075258-60075277 | None:intergenic | 25.0% |
| ! | CTAAGTGTTTGTTTAGATTA+AGG | - | chr8_3:60075386-60075405 | None:intergenic | 25.0% |
| !!! | ATCAGATTGTTCAAGTTTTT+AGG | + | chr8_3:60075517-60075536 | Msa1299090:intron | 25.0% |
| !! | TTAGGATGTTTTCTTTTCTT+AGG | + | chr8_3:60075535-60075554 | Msa1299090:intron | 25.0% |
| !! | TAGGATGTTTTCTTTTCTTA+GGG | + | chr8_3:60075536-60075555 | Msa1299090:intron | 25.0% |
| !!! | TTGTTTTGTTCGAATGTAAA+TGG | - | chr8_3:60075571-60075590 | None:intergenic | 25.0% |
| ! | AATTTAGTTAAAGATGTGCA+TGG | + | chr8_3:60075650-60075669 | Msa1299090:intron | 25.0% |
| ! | ATTAAAGACATAAATCAGCT+TGG | - | chr8_3:60075872-60075891 | None:intergenic | 25.0% |
| ! | AGTTTAACATATCAGATGTA+TGG | - | chr8_3:60075902-60075921 | None:intergenic | 25.0% |
| ! | GTTAACGAAAACAAACAAAT+TGG | - | chr8_3:60076052-60076071 | None:intergenic | 25.0% |
| ! | ATAAAGAAATCAATGCAAAG+AGG | - | chr8_3:60076274-60076293 | None:intergenic | 25.0% |
| ! | ATTCAAAACAAAACGATTCT+AGG | + | chr8_3:60076406-60076425 | Msa1299090:CDS | 25.0% |
| !! | TTTTGATACTGTTTCATAGT+TGG | + | chr8_3:60076826-60076845 | Msa1299090:intron | 25.0% |
| ! | TTTGATACTGTTTCATAGTT+GGG | + | chr8_3:60076827-60076846 | Msa1299090:intron | 25.0% |
| ! | TATGTTTAATCTTTATGCAG+TGG | + | chr8_3:60076859-60076878 | Msa1299090:intron | 25.0% |
| GATAAGAGAATTCAAATACG+AGG | + | chr8_3:60073474-60073493 | Msa1299090:five_prime_UTR | 30.0% | |
| TTCATGGATAGATAGATAGA+TGG | - | chr8_3:60073516-60073535 | None:intergenic | 30.0% | |
| ! | CAAATCGCAAAACCAATTTT+TGG | + | chr8_3:60073627-60073646 | Msa1299090:five_prime_UTR | 30.0% |
| ! | TTCCCCCTTTTATATCTAAA+CGG | + | chr8_3:60073720-60073739 | Msa1299090:five_prime_UTR | 30.0% |
| AGAGCCGTTTAGATATAAAA+GGG | - | chr8_3:60073727-60073746 | None:intergenic | 30.0% | |
| GAGAGATGTTTGATGAATTA+AGG | - | chr8_3:60073800-60073819 | None:intergenic | 30.0% | |
| ! | TCTGAAATTCGAAATTTGGA+GGG | - | chr8_3:60073829-60073848 | None:intergenic | 30.0% |
| ! | ATCTGAAATTCGAAATTTGG+AGG | - | chr8_3:60073830-60073849 | None:intergenic | 30.0% |
| ! | TGGATCTGAAATTCGAAATT+TGG | - | chr8_3:60073833-60073852 | None:intergenic | 30.0% |
| AATTTCGAATTTCAGATCCA+TGG | + | chr8_3:60073833-60073852 | Msa1299090:exon | 30.0% | |
| AAAGACGATGTTCGTTTAAT+TGG | + | chr8_3:60074044-60074063 | Msa1299090:CDS | 30.0% | |
| AACAGTTGTTAATGATGTTC+AGG | + | chr8_3:60074163-60074182 | Msa1299090:intron | 30.0% | |
| ACATGAGGGAACAAAAATTA+AGG | - | chr8_3:60074265-60074284 | None:intergenic | 30.0% | |
| AATCTCAATTCTTCACAAGA+AGG | + | chr8_3:60074550-60074569 | Msa1299090:CDS | 30.0% | |
| TACTTTCGTGATTTAGGTAT+CGG | + | chr8_3:60074664-60074683 | Msa1299090:intron | 30.0% | |
| ATCTGGGAAAAGTTGAATTA+GGG | - | chr8_3:60074784-60074803 | None:intergenic | 30.0% | |
| ! | TTTCCCAGATCTTTGAAAAA+TGG | + | chr8_3:60074794-60074813 | Msa1299090:CDS | 30.0% |
| !! | GTTACCATTTTTCAAAGATC+TGG | - | chr8_3:60074801-60074820 | None:intergenic | 30.0% |
| !! | TTTCTTCAAATTTTGGGTCA+CGG | + | chr8_3:60074986-60075005 | Msa1299090:intron | 30.0% |
| TAAGAAAAACTAGAGTAGAG+TGG | + | chr8_3:60075056-60075075 | Msa1299090:intron | 30.0% | |
| ! | GGCGATAATTTGAATTTTTG+AGG | + | chr8_3:60075077-60075096 | Msa1299090:intron | 30.0% |
| !!! | GAATTTTTGAAACATGGGTT+TGG | + | chr8_3:60075116-60075135 | Msa1299090:intron | 30.0% |
| AACCCCAAGTTAACTAAATA+AGG | + | chr8_3:60075252-60075271 | Msa1299090:intron | 30.0% | |
| ACCCCAAGTTAACTAAATAA+GGG | + | chr8_3:60075253-60075272 | Msa1299090:intron | 30.0% | |
| ! | ACCCTTATTTAGTTAACTTG+GGG | - | chr8_3:60075257-60075276 | None:intergenic | 30.0% |
| ! | GAACCCTTATTTAGTTAACT+TGG | - | chr8_3:60075259-60075278 | None:intergenic | 30.0% |
| CAAAAGACATAATACAGGTA+TGG | - | chr8_3:60075439-60075458 | None:intergenic | 30.0% | |
| TGAACAATCTGATGAGAATT+GGG | - | chr8_3:60075510-60075529 | None:intergenic | 30.0% | |
| TTGAACAATCTGATGAGAAT+TGG | - | chr8_3:60075511-60075530 | None:intergenic | 30.0% | |
| ! | TGTTTTCTTTTCTTAGGGTT+AGG | + | chr8_3:60075541-60075560 | Msa1299090:intron | 30.0% |
| ! | TTTAATGTTTTGCAGACAGA+AGG | + | chr8_3:60075761-60075780 | Msa1299090:intron | 30.0% |
| ! | TTAATGTTTTGCAGACAGAA+GGG | + | chr8_3:60075762-60075781 | Msa1299090:intron | 30.0% |
| GCACATTTGCAATATCATAA+AGG | - | chr8_3:60076139-60076158 | None:intergenic | 30.0% | |
| AGTATATTACCTTCTCGATA+AGG | - | chr8_3:60076175-60076194 | None:intergenic | 30.0% | |
| ! | TTTTCTTGTATCTGTGGTAT+GGG | - | chr8_3:60076328-60076347 | None:intergenic | 30.0% |
| ! | AACAAAACGATTCTAGGAAA+AGG | + | chr8_3:60076412-60076431 | Msa1299090:CDS | 30.0% |
| ! | ACAAAACGATTCTAGGAAAA+GGG | + | chr8_3:60076413-60076432 | Msa1299090:CDS | 30.0% |
| ! | AATAGAACAGACTTGTTCAT+GGG | + | chr8_3:60076474-60076493 | Msa1299090:CDS | 30.0% |
| ! | CTTTAAGAAGCAAAAGACAA+TGG | + | chr8_3:60076503-60076522 | Msa1299090:CDS | 30.0% |
| AAGACAATGGAAAATGATAG+TGG | + | chr8_3:60076516-60076535 | Msa1299090:CDS | 30.0% | |
| AGACAATGGAAAATGATAGT+GGG | + | chr8_3:60076517-60076536 | Msa1299090:CDS | 30.0% | |
| ACTTCAGCTAACTATCAATT+TGG | + | chr8_3:60076576-60076595 | Msa1299090:CDS | 30.0% | |
| ATGAAAATGCTTAATTGCCT+TGG | - | chr8_3:60076710-60076729 | None:intergenic | 30.0% | |
| AAAATCCGTACATTCTATGT+TGG | - | chr8_3:60077127-60077146 | None:intergenic | 30.0% | |
| AGAATTCAAATACGAGGTTG+CGG | + | chr8_3:60073480-60073499 | Msa1299090:five_prime_UTR | 35.0% | |
| GGCCGAAATTTGAAAATTGA+TGG | - | chr8_3:60073675-60073694 | None:intergenic | 35.0% | |
| AGCCGTTTAGATATAAAAGG+GGG | - | chr8_3:60073725-60073744 | None:intergenic | 35.0% | |
| GAGCCGTTTAGATATAAAAG+GGG | - | chr8_3:60073726-60073745 | None:intergenic | 35.0% | |
| CAGAGCCGTTTAGATATAAA+AGG | - | chr8_3:60073728-60073747 | None:intergenic | 35.0% | |
| CGATGATGTTGTTCGAATTA+AGG | - | chr8_3:60073760-60073779 | None:intergenic | 35.0% | |
| TTTGTTTACGATCGTAAGTG+TGG | - | chr8_3:60073890-60073909 | None:intergenic | 35.0% | |
| GATCGTAAACAAAAATCCCT+CGG | + | chr8_3:60073897-60073916 | Msa1299090:CDS | 35.0% | |
| GAGTAAGAGTAACACTTACT+TGG | - | chr8_3:60073934-60073953 | None:intergenic | 35.0% | |
| AAAAAAAGGTGGGAACATGA+GGG | - | chr8_3:60074279-60074298 | None:intergenic | 35.0% | |
| AAAAAAAAGGTGGGAACATG+AGG | - | chr8_3:60074280-60074299 | None:intergenic | 35.0% | |
| !! | TTTCCAGGTATACTGATTCT+TGG | - | chr8_3:60074367-60074386 | None:intergenic | 35.0% |
| AAGAATCAGTATACCTGGAA+AGG | + | chr8_3:60074366-60074385 | Msa1299090:CDS | 35.0% | |
| !! | TTGAATGGGTTTTTAGGAAG+AGG | + | chr8_3:60074516-60074535 | Msa1299090:intron | 35.0% |
| !! | TGAATGGGTTTTTAGGAAGA+GGG | + | chr8_3:60074517-60074536 | Msa1299090:intron | 35.0% |
| !! | GTTTTTAGGAAGAGGGTTTA+TGG | + | chr8_3:60074524-60074543 | Msa1299090:intron | 35.0% |
| GATCTGGGAAAAGTTGAATT+AGG | - | chr8_3:60074785-60074804 | None:intergenic | 35.0% | |
| !! | TTATGAACCTGTGTTTTTGC+TGG | + | chr8_3:60074853-60074872 | Msa1299090:intron | 35.0% |
| ATTAATGTGTGTGTAGACTG+AGG | - | chr8_3:60075324-60075343 | None:intergenic | 35.0% | |
| ACACACACATTAATACGTTG+TGG | + | chr8_3:60075330-60075349 | Msa1299090:intron | 35.0% | |
| CACACACATTAATACGTTGT+GGG | + | chr8_3:60075331-60075350 | Msa1299090:intron | 35.0% | |
| !! | CGTTGTGGGTTATAGTTTTA+AGG | + | chr8_3:60075345-60075364 | Msa1299090:intron | 35.0% |
| GTGCACAAAAGACATAATAC+AGG | - | chr8_3:60075444-60075463 | None:intergenic | 35.0% | |
| TATAATACTGGAGTCGTATG+TGG | + | chr8_3:60075694-60075713 | Msa1299090:intron | 35.0% | |
| CTTGGAATGAACAAGAAACT+AGG | - | chr8_3:60075854-60075873 | None:intergenic | 35.0% | |
| AACATATCAGATGTATGGCA+TGG | - | chr8_3:60075897-60075916 | None:intergenic | 35.0% | |
| ! | GTTTTCTTGTATCTGTGGTA+TGG | - | chr8_3:60076329-60076348 | None:intergenic | 35.0% |
| ATACAAGAAAACCAGCATTC+AGG | + | chr8_3:60076337-60076356 | Msa1299090:CDS | 35.0% | |
| AAAAGGGAAGACATTGAATG+AGG | + | chr8_3:60076371-60076390 | Msa1299090:CDS | 35.0% | |
| ! | GAATAGAACAGACTTGTTCA+TGG | + | chr8_3:60076473-60076492 | Msa1299090:CDS | 35.0% |
| AGAACTGTACTCTCATTACA+TGG | + | chr8_3:60076952-60076971 | Msa1299090:three_prime_UTR | 35.0% | |
| TGTGTCTAAGTACACTACAA+TGG | - | chr8_3:60077093-60077112 | None:intergenic | 35.0% | |
| ATGTGCCAACATAGAATGTA+CGG | + | chr8_3:60077119-60077138 | Msa1299090:three_prime_UTR | 35.0% | |
| !!! | ATTTTTTTAGCTGTGACGCT+TGG | + | chr8_3:60077142-60077161 | Msa1299090:three_prime_UTR | 35.0% |
| GTACAGCCTAATCAGATATT+AGG | - | chr8_3:60077168-60077187 | None:intergenic | 35.0% | |
| ATATCTGATTAGGCTGTACT+TGG | + | chr8_3:60077169-60077188 | Msa1299090:three_prime_UTR | 35.0% | |
| TATCTGATTAGGCTGTACTT+GGG | + | chr8_3:60077170-60077189 | Msa1299090:three_prime_UTR | 35.0% | |
| AACGTGCAACCTTATATTGA+AGG | - | chr8_3:60077278-60077297 | None:intergenic | 35.0% | |
| !!! | ATTGGTTTTGCGATTTGCGT+TGG | - | chr8_3:60073624-60073643 | None:intergenic | 40.0% |
| ATAAAAGGGGGAAGAGAAGA+GGG | - | chr8_3:60073713-60073732 | None:intergenic | 40.0% | |
| TATAAAAGGGGGAAGAGAAG+AGG | - | chr8_3:60073714-60073733 | None:intergenic | 40.0% | |
| !! | ACACTTACTTGGTGCATAAG+AGG | - | chr8_3:60073923-60073942 | None:intergenic | 40.0% |
| ! | GTCAATGTTCTCGAAAGCAT+CGG | + | chr8_3:60074214-60074233 | Msa1299090:CDS | 40.0% |
| !! | TCAATGTTCTCGAAAGCATC+GGG | + | chr8_3:60074215-60074234 | Msa1299090:CDS | 40.0% |
| AAGCCAAGAATCAGTATACC+TGG | + | chr8_3:60074361-60074380 | Msa1299090:CDS | 40.0% | |
| ! | GTATACCTGGAAAGGTTTTG+CGG | + | chr8_3:60074374-60074393 | Msa1299090:CDS | 40.0% |
| TTAAGCTCCTGTAAAGCAAC+AGG | - | chr8_3:60074405-60074424 | None:intergenic | 40.0% | |
| !! | TGTTGCTTTACAGGAGCTTA+AGG | + | chr8_3:60074404-60074423 | Msa1299090:CDS | 40.0% |
| CTCAATTCTTCACAAGAAGG+TGG | + | chr8_3:60074553-60074572 | Msa1299090:CDS | 40.0% | |
| !! | GATTTAGGTATCGGATGAAG+AGG | + | chr8_3:60074673-60074692 | Msa1299090:intron | 40.0% |
| GAATTGTTATCCCAAACCAC+TGG | + | chr8_3:60074704-60074723 | Msa1299090:CDS | 40.0% | |
| TTGTCATTCTGACTTCCAGT+GGG | - | chr8_3:60074755-60074774 | None:intergenic | 40.0% | |
| ATTGTCATTCTGACTTCCAG+TGG | - | chr8_3:60074756-60074775 | None:intergenic | 40.0% | |
| AACAACACCAGCAAAAACAC+AGG | - | chr8_3:60074863-60074882 | None:intergenic | 40.0% | |
| !!! | TTTTGCTGGTGTTGTTGTTG+TGG | + | chr8_3:60074867-60074886 | Msa1299090:intron | 40.0% |
| ! | AGGGTTCAATCCAATTTTGC+TGG | + | chr8_3:60075272-60075291 | Msa1299090:intron | 40.0% |
| ! | GGGTTCAATCCAATTTTGCT+GGG | + | chr8_3:60075273-60075292 | Msa1299090:intron | 40.0% |
| CTATGCTTACCCAGCAAAAT+TGG | - | chr8_3:60075285-60075304 | None:intergenic | 40.0% | |
| ! | CAATTTTGCTGGGTAAGCAT+AGG | + | chr8_3:60075283-60075302 | Msa1299090:intron | 40.0% |
| TGAGAATTGGGATTGTTCTG+AGG | - | chr8_3:60075498-60075517 | None:intergenic | 40.0% | |
| !!! | TTGGCACTGATTGCATTTTG+AGG | + | chr8_3:60075725-60075744 | Msa1299090:intron | 40.0% |
| AGACAGAAGGGAAAAATCTC+TGG | + | chr8_3:60075774-60075793 | Msa1299090:intron | 40.0% | |
| ! | TTTTCACTTACAGTCCCATC+TGG | + | chr8_3:60076092-60076111 | Msa1299090:intron | 40.0% |
| TACCTTCTCGATAAGGTTCA+TGG | - | chr8_3:60076168-60076187 | None:intergenic | 40.0% | |
| !!! | TGCTGGTTTTCTTGTATCTG+TGG | - | chr8_3:60076334-60076353 | None:intergenic | 40.0% |
| TCACAAACATAAGCTTTGCC+AGG | + | chr8_3:60076451-60076470 | Msa1299090:CDS | 40.0% | |
| GAACAAGTCTGTTCTATTCC+TGG | - | chr8_3:60076472-60076491 | None:intergenic | 40.0% | |
| !! | AAATGATAGTGGGCTATGTC+TGG | + | chr8_3:60076527-60076546 | Msa1299090:CDS | 40.0% |
| TGTCTGGAAGATGTGAAACA+AGG | + | chr8_3:60076543-60076562 | Msa1299090:CDS | 40.0% | |
| ! | CTCTGAGAATAAAGTGAAGC+AGG | + | chr8_3:60076635-60076654 | Msa1299090:CDS | 40.0% |
| !!! | TGCCTTGGTTTTGATACTGA+GGG | - | chr8_3:60076695-60076714 | None:intergenic | 40.0% |
| !!! | TTGCCTTGGTTTTGATACTG+AGG | - | chr8_3:60076696-60076715 | None:intergenic | 40.0% |
| ACTCTCATTACATGGAAGCA+TGG | + | chr8_3:60076960-60076979 | Msa1299090:three_prime_UTR | 40.0% | |
| ! | ACATGGAAGCATGGAAATCT+TGG | + | chr8_3:60076969-60076988 | Msa1299090:three_prime_UTR | 40.0% |
| GCTTGGCCTAATATCTGATT+AGG | + | chr8_3:60077159-60077178 | Msa1299090:three_prime_UTR | 40.0% | |
| TATCACACCTCTTTGTGCAA+AGG | + | chr8_3:60077201-60077220 | Msa1299090:three_prime_UTR | 40.0% | |
| ATCACACCTCTTTGTGCAAA+GGG | + | chr8_3:60077202-60077221 | Msa1299090:three_prime_UTR | 40.0% | |
| AGATTTCCCTTTGCACAAAG+AGG | - | chr8_3:60077211-60077230 | None:intergenic | 40.0% | |
| ! | GTTTTGCGATTTGCGTTGGA+GGG | - | chr8_3:60073620-60073639 | None:intergenic | 45.0% |
| !!! | TGGAAGCGAGCGTGTTTTTT+TGG | - | chr8_3:60073655-60073674 | None:intergenic | 45.0% |
| !! | GTTCAGGTGTTGAGAGAAGA+CGG | + | chr8_3:60074179-60074198 | Msa1299090:intron | 45.0% |
| !! | CAATGTTCTCGAAAGCATCG+GGG | + | chr8_3:60074216-60074235 | Msa1299090:CDS | 45.0% |
| AATTGCCGCAAAACCTTTCC+AGG | - | chr8_3:60074382-60074401 | None:intergenic | 45.0% | |
| !! | GGCAATTCCTGTTGCTTTAC+AGG | + | chr8_3:60074395-60074414 | Msa1299090:CDS | 45.0% |
| AGGTGGCAATGAAGATGTGA+AGG | + | chr8_3:60074570-60074589 | Msa1299090:CDS | 45.0% | |
| ! | ATTCTGACTTCCAGTGGGTT+GGG | - | chr8_3:60074750-60074769 | None:intergenic | 45.0% |
| GTCGTATGTGGACTTAGACT+TGG | + | chr8_3:60075706-60075725 | Msa1299090:intron | 45.0% | |
| !! | TATCCCTTGATGATGCAGCA+AGG | + | chr8_3:60075964-60075983 | Msa1299090:CDS | 45.0% |
| CAACCTTGCTGCATCATCAA+GGG | - | chr8_3:60075970-60075989 | None:intergenic | 45.0% | |
| ACAACCTTGCTGCATCATCA+AGG | - | chr8_3:60075971-60075990 | None:intergenic | 45.0% | |
| CTTCTCGATAAGGTTCATGG+AGG | - | chr8_3:60076165-60076184 | None:intergenic | 45.0% | |
| CTCCATGAACCTTATCGAGA+AGG | + | chr8_3:60076163-60076182 | Msa1299090:CDS | 45.0% | |
| CAAGAAAACCAGCATTCAGG+TGG | + | chr8_3:60076340-60076359 | Msa1299090:CDS | 45.0% | |
| TTCAGGTGGCTAGGCTTAAA+AGG | + | chr8_3:60076354-60076373 | Msa1299090:CDS | 45.0% | |
| TCAGGTGGCTAGGCTTAAAA+GGG | + | chr8_3:60076355-60076374 | Msa1299090:CDS | 45.0% | |
| !! | GATTCTAGGAAAAGGGCGTT+TGG | + | chr8_3:60076420-60076439 | Msa1299090:CDS | 45.0% |
| ! | AGAACAGACTTGTTCATGGG+TGG | + | chr8_3:60076477-60076496 | Msa1299090:CDS | 45.0% |
| GATACAAAGGCAGGAGCAAA+AGG | - | chr8_3:60076603-60076622 | None:intergenic | 45.0% | |
| !! | GCTTCCAGCTTTGGATACAA+AGG | - | chr8_3:60076616-60076635 | None:intergenic | 45.0% |
| ATTCTCAGAGCTTCCAGCTT+TGG | - | chr8_3:60076625-60076644 | None:intergenic | 45.0% | |
| TGCCCTCAGTATCAAAACCA+AGG | + | chr8_3:60076690-60076709 | Msa1299090:CDS | 45.0% | |
| !! | TCTTGGTACTCTGAAGTTGC+TGG | + | chr8_3:60076986-60077005 | Msa1299090:three_prime_UTR | 45.0% |
| !! | CTTGGTACTCTGAAGTTGCT+GGG | + | chr8_3:60076987-60077006 | Msa1299090:three_prime_UTR | 45.0% |
| !! | CAAAAATTAATAAAAAAAAA+AGG | - | chr8_3:60074293-60074312 | None:intergenic | 5.0% |
| ! | GGTTTTGCGATTTGCGTTGG+AGG | - | chr8_3:60073621-60073640 | None:intergenic | 50.0% |
| !! | AAGAGGGTGTTTGTGTGTGG+CGG | - | chr8_3:60073697-60073716 | None:intergenic | 50.0% |
| !! | GAGAAGAGGGTGTTTGTGTG+TGG | - | chr8_3:60073700-60073719 | None:intergenic | 50.0% |
| !! | TAAGTGTGGTGTCGTGAAGG+AGG | - | chr8_3:60073876-60073895 | None:intergenic | 50.0% |
| !! | TCGTAAGTGTGGTGTCGTGA+AGG | - | chr8_3:60073879-60073898 | None:intergenic | 50.0% |
| ! | GGTATCGGATGAAGAGGATG+AGG | + | chr8_3:60074679-60074698 | Msa1299090:intron | 50.0% |
| ATCCCAAACCACTGGAAGTC+AGG | + | chr8_3:60074712-60074731 | Msa1299090:CDS | 50.0% | |
| TCCCAAACCACTGGAAGTCA+GGG | + | chr8_3:60074713-60074732 | Msa1299090:CDS | 50.0% | |
| ACCCTGACTTCCAGTGGTTT+GGG | - | chr8_3:60074717-60074736 | None:intergenic | 50.0% | |
| TGATTCACCCTGACTTCCAG+TGG | - | chr8_3:60074723-60074742 | None:intergenic | 50.0% | |
| GAATCACTATCCCAACCCAC+TGG | + | chr8_3:60074737-60074756 | Msa1299090:CDS | 50.0% | |
| CATTCTGACTTCCAGTGGGT+TGG | - | chr8_3:60074751-60074770 | None:intergenic | 50.0% | |
| TAACCACTCTACTCTGCAGC+TGG | + | chr8_3:60075935-60075954 | Msa1299090:intron | 50.0% | |
| TTTCCAGCTGCAGAGTAGAG+TGG | - | chr8_3:60075941-60075960 | None:intergenic | 50.0% | |
| GATGCAGCAAGGTTGTTGCT+TGG | + | chr8_3:60075975-60075994 | Msa1299090:CDS | 50.0% | |
| ! | CTTTTGCTGCAAGGCCAGAT+GGG | - | chr8_3:60076109-60076128 | None:intergenic | 50.0% |
| ! | ACTTTTGCTGCAAGGCCAGA+TGG | - | chr8_3:60076110-60076129 | None:intergenic | 50.0% |
| !! | CTGGCCTTGCAGCAAAAGTT+AGG | + | chr8_3:60076111-60076130 | Msa1299090:CDS | 50.0% |
| AAACCAGCATTCAGGTGGCT+AGG | + | chr8_3:60076345-60076364 | Msa1299090:CDS | 50.0% | |
| !! | CCAGCTTTGGATACAAAGGC+AGG | - | chr8_3:60076612-60076631 | None:intergenic | 50.0% |
| CCTGCCTTTGTATCCAAAGC+TGG | + | chr8_3:60076609-60076628 | Msa1299090:CDS | 50.0% | |
| AAGTGAAGCAGGTGCATGAC+TGG | + | chr8_3:60076646-60076665 | Msa1299090:CDS | 50.0% | |
| AGTGAAGCAGGTGCATGACT+GGG | + | chr8_3:60076647-60076666 | Msa1299090:CDS | 50.0% | |
| !! | ACTCTGAAGTTGCTGGGAAG+AGG | + | chr8_3:60076993-60077012 | Msa1299090:three_prime_UTR | 50.0% |
| TTGCGATTTGCGTTGGAGGG+AGG | - | chr8_3:60073617-60073636 | None:intergenic | 55.0% | |
| !! | AGAGGGTGTTTGTGTGTGGC+GGG | - | chr8_3:60073696-60073715 | None:intergenic | 55.0% |
| ATCGGAGGAAGAAGCAGCCA+TGG | - | chr8_3:60073853-60073872 | None:intergenic | 55.0% | |
| !! | GTGGTGTCGTGAAGGAGGAT+CGG | - | chr8_3:60073871-60073890 | None:intergenic | 55.0% |
| ! | CTTGGTGCATAAGAGGCCGA+GGG | - | chr8_3:60073916-60073935 | None:intergenic | 55.0% |
| !! | ACTTGGTGCATAAGAGGCCG+AGG | - | chr8_3:60073917-60073936 | None:intergenic | 55.0% |
| GACGATGCTGCCGCCAAATT+AGG | + | chr8_3:60074071-60074090 | Msa1299090:CDS | 55.0% | |
| CACCCTGACTTCCAGTGGTT+TGG | - | chr8_3:60074718-60074737 | None:intergenic | 55.0% | |
| TGCTGGGTAAGCATAGGTCG+AGG | + | chr8_3:60075289-60075308 | Msa1299090:intron | 55.0% | |
| GCTGGGTAAGCATAGGTCGA+GGG | + | chr8_3:60075290-60075309 | Msa1299090:intron | 55.0% | |
| CTGGGTAAGCATAGGTCGAG+GGG | + | chr8_3:60075291-60075310 | Msa1299090:intron | 55.0% | |
| ! | GGCGCCTAACTTTTGCTGCA+AGG | - | chr8_3:60076118-60076137 | None:intergenic | 55.0% |
| AAGCCTAGCCACCTGAATGC+TGG | - | chr8_3:60076351-60076370 | None:intergenic | 55.0% | |
| GTGTCGTGAAGGAGGATCGG+AGG | - | chr8_3:60073868-60073887 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 60073464 | 60077343 | 60073464 | ID=Msa1299090;Name=Msa1299090 |
| chr8_3 | mRNA | 60073464 | 60077343 | 60073464 | ID=Msa1299090-mRNA-1;Parent=Msa1299090;Name=Msa1299090-mRNA-1;_AED=0.13;_eAED=0.13;_QI=388|1|1|1|0.9|0.90|11|420|363 |
| chr8_3 | exon | 60073464 | 60073934 | 60073464 | ID=Msa1299090-mRNA-1:exon:17432;Parent=Msa1299090-mRNA-1 |
| chr8_3 | exon | 60074025 | 60074092 | 60074025 | ID=Msa1299090-mRNA-1:exon:17433;Parent=Msa1299090-mRNA-1 |
| chr8_3 | exon | 60074185 | 60074237 | 60074185 | ID=Msa1299090-mRNA-1:exon:17434;Parent=Msa1299090-mRNA-1 |
| chr8_3 | exon | 60074348 | 60074425 | 60074348 | ID=Msa1299090-mRNA-1:exon:17435;Parent=Msa1299090-mRNA-1 |
| chr8_3 | exon | 60074532 | 60074591 | 60074532 | ID=Msa1299090-mRNA-1:exon:17436;Parent=Msa1299090-mRNA-1 |
| chr8_3 | exon | 60074680 | 60074815 | 60074680 | ID=Msa1299090-mRNA-1:exon:17437;Parent=Msa1299090-mRNA-1 |
| chr8_3 | exon | 60075776 | 60075840 | 60075776 | ID=Msa1299090-mRNA-1:exon:17438;Parent=Msa1299090-mRNA-1 |
| chr8_3 | exon | 60075954 | 60076026 | 60075954 | ID=Msa1299090-mRNA-1:exon:17439;Parent=Msa1299090-mRNA-1 |
| chr8_3 | exon | 60076105 | 60076184 | 60076105 | ID=Msa1299090-mRNA-1:exon:17440;Parent=Msa1299090-mRNA-1 |
| chr8_3 | exon | 60076324 | 60076740 | 60076324 | ID=Msa1299090-mRNA-1:exon:17441;Parent=Msa1299090-mRNA-1 |
| chr8_3 | exon | 60076945 | 60077343 | 60076945 | ID=Msa1299090-mRNA-1:exon:17442;Parent=Msa1299090-mRNA-1 |
| chr8_3 | five_prime_UTR | 60073464 | 60073851 | 60073464 | ID=Msa1299090-mRNA-1:five_prime_utr;Parent=Msa1299090-mRNA-1 |
| chr8_3 | CDS | 60073852 | 60073934 | 60073852 | ID=Msa1299090-mRNA-1:cds;Parent=Msa1299090-mRNA-1 |
| chr8_3 | CDS | 60074025 | 60074092 | 60074025 | ID=Msa1299090-mRNA-1:cds;Parent=Msa1299090-mRNA-1 |
| chr8_3 | CDS | 60074185 | 60074237 | 60074185 | ID=Msa1299090-mRNA-1:cds;Parent=Msa1299090-mRNA-1 |
| chr8_3 | CDS | 60074348 | 60074425 | 60074348 | ID=Msa1299090-mRNA-1:cds;Parent=Msa1299090-mRNA-1 |
| chr8_3 | CDS | 60074532 | 60074591 | 60074532 | ID=Msa1299090-mRNA-1:cds;Parent=Msa1299090-mRNA-1 |
| chr8_3 | CDS | 60074680 | 60074815 | 60074680 | ID=Msa1299090-mRNA-1:cds;Parent=Msa1299090-mRNA-1 |
| chr8_3 | CDS | 60075776 | 60075840 | 60075776 | ID=Msa1299090-mRNA-1:cds;Parent=Msa1299090-mRNA-1 |
| chr8_3 | CDS | 60075954 | 60076026 | 60075954 | ID=Msa1299090-mRNA-1:cds;Parent=Msa1299090-mRNA-1 |
| chr8_3 | CDS | 60076105 | 60076184 | 60076105 | ID=Msa1299090-mRNA-1:cds;Parent=Msa1299090-mRNA-1 |
| chr8_3 | CDS | 60076324 | 60076719 | 60076324 | ID=Msa1299090-mRNA-1:cds;Parent=Msa1299090-mRNA-1 |
| chr8_3 | three_prime_UTR | 60076720 | 60076740 | 60076720 | ID=Msa1299090-mRNA-1:three_prime_utr;Parent=Msa1299090-mRNA-1 |
| chr8_3 | three_prime_UTR | 60076945 | 60077343 | 60076945 | ID=Msa1299090-mRNA-1:three_prime_utr;Parent=Msa1299090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
