AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1211220

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1211220 MtrunA17_Chr4g0060031 94.675 338 13 3 1 334 1 337 0.0 593
Msa1211220 MtrunA17_Chr5g0415941 46.802 344 151 12 1 332 1 324 1.67e-81 250
Msa1211220 MtrunA17_Chr8g0362751 41.411 326 128 10 19 334 14 286 1.59e-56 185
Msa1211220 MtrunA17_Chr6g0450991 43.952 248 103 7 31 275 14 228 7.09e-48 162
Msa1211220 MtrunA17_Chr8g0362151 50.000 160 57 4 48 199 42 186 8.32e-39 139
Msa1211220 MtrunA17_Chr5g0416391 57.937 126 48 2 66 187 45 169 4.09e-38 137
Msa1211220 MtrunA17_Chr6g0453021 45.238 168 76 4 48 204 50 212 2.01e-36 132
Msa1211220 MtrunA17_Chr3g0123691 58.559 111 46 0 86 196 51 161 2.51e-36 132
Msa1211220 MtrunA17_Chr3g0119291 62.857 105 39 0 94 198 58 162 1.79e-35 129
Msa1211220 MtrunA17_Chr8g0381741 60.784 102 40 0 94 195 53 154 4.77e-35 129
Msa1211220 MtrunA17_Chr7g0217111 43.684 190 93 6 81 257 64 252 2.56e-33 124
Msa1211220 MtrunA17_Chr7g0265521 48.148 135 50 4 94 228 62 176 7.14e-30 114
Msa1211220 MtrunA17_Chr1g0179581 57.426 101 35 2 84 184 18 110 1.04e-28 107
Msa1211220 MtrunA17_Chr3g0127511 55.789 95 42 0 97 191 40 134 2.47e-28 110
Msa1211220 MtrunA17_Chr8g0346251 47.778 90 47 0 102 191 48 137 3.31e-24 99.4
Msa1211220 MtrunA17_Chr5g0403701 45.872 109 52 1 95 203 53 154 1.14e-21 91.3
Msa1211220 MtrunA17_Chr5g0403691 49.091 110 54 2 95 203 53 161 2.52e-21 90.9
Msa1211220 MtrunA17_Chr4g0055851 50.926 108 44 2 80 187 107 205 7.19e-21 90.9
Msa1211220 MtrunA17_Chr5g0399491 43.448 145 61 4 45 187 96 221 1.85e-19 87.0
Msa1211220 MtrunA17_Chr1g0175651 46.341 123 55 3 69 187 124 239 1.17e-18 84.7
Msa1211220 MtrunA17_Chr2g0308611 50.000 90 45 0 93 182 198 287 4.65e-18 84.0
Msa1211220 MtrunA17_Chr7g0258831 47.115 104 53 1 79 182 146 247 5.24e-18 83.2
Msa1211220 MtrunA17_Chr8g0335131 51.613 93 38 2 95 187 146 231 2.05e-17 81.6
Msa1211220 MtrunA17_Chr4g0054421 46.154 104 49 1 84 187 116 212 2.40e-17 80.9
Msa1211220 MtrunA17_Chr1g0151971 36.905 168 78 4 26 182 67 217 1.30e-16 79.0
Msa1211220 MtrunA17_Chr5g0400781 44.792 96 53 0 87 182 115 210 6.39e-16 76.6
Msa1211220 MtrunA17_Chr3g0135331 48.611 72 37 0 95 166 145 216 2.29e-14 72.8
Msa1211220 MtrunA17_Chr4g0044091 45.161 93 44 1 95 187 65 150 2.34e-14 70.9
Msa1211220 MtrunA17_Chr4g0071411 44.444 90 43 1 98 187 91 173 6.11e-14 70.1
Msa1211220 MtrunA17_Chr2g0299031 40.909 88 52 0 95 182 82 169 1.62e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1211220 AT3G01470.1 45.205 219 88 6 52 267 32 221 9.55e-45 154
Msa1211220 AT4G40060.1 41.379 261 132 8 44 300 4 247 3.11e-40 143
Msa1211220 AT3G01220.1 59.130 115 43 1 94 208 86 196 2.42e-36 132
Msa1211220 AT2G22430.1 63.636 99 36 0 93 191 60 158 3.62e-36 133
Msa1211220 AT5G15150.1 65.957 94 32 0 94 187 114 207 5.99e-36 132
Msa1211220 AT1G69780.1 54.918 122 50 1 83 199 73 194 1.68e-35 130
Msa1211220 AT5G65310.2 62.626 99 37 0 93 191 52 150 2.13e-35 130
Msa1211220 AT5G65310.1 62.626 99 37 0 93 191 70 168 2.86e-35 130
Msa1211220 AT1G27045.1 44.134 179 80 4 23 200 14 173 4.53e-33 122
Msa1211220 AT1G26960.1 50.000 142 58 4 50 190 37 166 1.55e-31 119
Msa1211220 AT1G27045.4 45.181 166 71 4 23 187 14 160 3.80e-31 118
Msa1211220 AT1G27045.5 53.846 117 53 1 83 198 12 128 3.30e-30 114
Msa1211220 AT1G27045.3 53.846 117 53 1 83 198 12 128 3.30e-30 114
Msa1211220 AT1G27045.2 53.846 117 53 1 83 198 4 120 3.80e-30 113
Msa1211220 AT2G18550.1 48.120 133 54 3 65 197 39 156 4.32e-28 109
Msa1211220 AT2G46680.1 48.148 108 56 0 91 198 28 135 1.21e-27 108
Msa1211220 AT3G61890.1 51.485 101 48 1 98 198 33 132 5.74e-27 106
Msa1211220 AT2G46680.2 52.688 93 44 0 91 183 28 120 4.21e-26 104
Msa1211220 AT4G36740.2 50.485 103 44 1 95 197 56 151 1.84e-25 102
Msa1211220 AT2G36610.1 38.764 178 79 7 45 203 12 178 1.92e-25 101
Msa1211220 AT4G36740.1 50.485 103 44 1 95 197 55 150 2.10e-25 102
Msa1211220 AT5G03790.1 45.528 123 54 3 95 211 77 192 3.03e-25 102
Msa1211220 AT5G03790.2 53.763 93 36 1 95 187 77 162 4.60e-25 100
Msa1211220 AT5G66700.1 48.454 97 43 1 95 191 71 160 1.82e-22 94.4
Msa1211220 AT5G06710.1 48.624 109 40 2 79 187 183 275 1.56e-18 85.5
Msa1211220 AT3G60390.1 46.281 121 54 3 67 187 138 247 2.03e-18 84.7
Msa1211220 AT5G53980.1 46.667 90 48 0 95 184 11 100 8.11e-18 79.7
Msa1211220 AT5G47370.1 48.077 104 47 1 84 187 119 215 8.82e-18 82.4
Msa1211220 AT2G44910.1 51.613 93 38 1 95 187 163 248 1.44e-17 82.4
Msa1211220 AT4G16780.1 45.133 113 47 2 75 187 117 214 2.07e-17 81.6
Msa1211220 AT4G17460.1 47.619 105 47 2 84 187 123 220 3.67e-17 80.9
Msa1211220 AT2G22800.1 43.750 96 54 0 87 182 105 200 1.83e-15 75.9
Msa1211220 AT2G01430.1 42.478 113 51 3 80 187 121 224 7.58e-15 73.9
Msa1211220 AT4G37790.1 43.810 105 52 2 83 187 114 211 1.94e-14 72.8
Msa1211220 AT5G06710.4 54.412 68 22 1 79 146 183 241 1.47e-13 70.5
Msa1211220 AT2G01430.2 46.575 73 32 2 80 147 121 191 6.36e-12 64.7
Msa1211220 AT1G70920.1 43.011 93 46 1 95 187 69 154 2.33e-11 62.8
Msa1211220 AT1G70920.2 43.011 93 46 1 95 187 39 124 2.87e-11 62.0

Find 109 sgRNAs with CRISPR-Local

Find 278 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTAAAAGAATTAATGCTTTC+TGG 0.113684 8_1:+70773807 Msa1211220:three_prime_UTR
CTCACTCACTTTGCACAAAA+AGG 0.203350 8_1:-70773620 None:intergenic
TAATTTACAATGCAACAAAA+TGG 0.203752 8_1:-70773757 None:intergenic
TCTTCTTCTACTTCTTTCTT+TGG 0.217329 8_1:+70771918 Msa1211220:CDS
GGATTTGATCTTGACGAAAA+TGG 0.224618 8_1:+70772397 Msa1211220:CDS
AGCCTCAACAATTGACAATT+TGG 0.241624 8_1:-70773234 None:intergenic
TTGTAAATTAATGAAACTTT+TGG 0.268912 8_1:+70773770 Msa1211220:three_prime_UTR
AGCCACGACAAGTTGCTATT+TGG 0.283167 8_1:+70772569 Msa1211220:CDS
TACAAGAGCCACACCCATTT+CGG 0.288630 8_1:-70773709 None:intergenic
TGAGAGACGCCGTTTCTTCT+CGG 0.306253 8_1:-70772452 None:intergenic
ATTTCATTTCATACCCGAAA+TGG 0.312835 8_1:+70773695 Msa1211220:three_prime_UTR
TGCATATTTGAAATATTTGC+AGG 0.318619 8_1:-70771816 None:intergenic
TTGTATCTATATAGCTATTA+TGG 0.322660 8_1:+70771699 Msa1211220:five_prime_UTR
ATCATCAAGCTCTTTGGCCT+TGG 0.324405 8_1:+70773516 Msa1211220:CDS
ACAAGAGCCACACCCATTTC+GGG 0.325705 8_1:-70773708 None:intergenic
TTGAATAGGTTCAAGATCTA+TGG 0.343669 8_1:+70772321 Msa1211220:intron
TTCAGCAAGGAGTGACATAT+TGG 0.347228 8_1:+70773289 Msa1211220:CDS
TGTCTTCTTCATCTTGTGAT+AGG 0.364063 8_1:-70773394 None:intergenic
CATGATAATTCATCAAGTTA+TGG 0.374938 8_1:+70773476 Msa1211220:CDS
AATTAAAGATCTAAGACTTA+TGG 0.375155 8_1:-70771658 None:intergenic
AAGATCATCATCAAGCTCTT+TGG 0.376736 8_1:+70773510 Msa1211220:CDS
ACCAAGGTCTTTAGCTAGCT+TGG 0.382164 8_1:-70772542 None:intergenic
AATTTACAATGCAACAAAAT+GGG 0.386090 8_1:-70773756 None:intergenic
TATAAGATAAAGTTTAACTT+TGG 0.405131 8_1:+70771732 Msa1211220:five_prime_UTR
ACCAAAGGTTTATTCATTGT+TGG 0.412212 8_1:-70773185 None:intergenic
ATAATCCTTCTCAAGCTGTT+TGG 0.413395 8_1:-70772620 None:intergenic
TGAAACAAAGGAATTCTTGC+AGG 0.414573 8_1:+70773160 Msa1211220:CDS
GAAATGGGTGTGGCTCTTGT+AGG 0.419023 8_1:+70773711 Msa1211220:three_prime_UTR
GGAGGTGTGGGAACAACGGC+AGG 0.421932 8_1:-70771594 None:intergenic
ACCAACAATGAATAAACCTT+TGG 0.422093 8_1:+70773184 Msa1211220:CDS
TTGTGATAGATAAATATATA+TGG 0.425813 8_1:+70771767 Msa1211220:exon
AAGGAAGGAAAAGGTGCAAC+AGG 0.438515 8_1:+70772362 Msa1211220:CDS
TGATTTCAGTGATGTGGGAT+TGG 0.456744 8_1:-70771616 None:intergenic
TATATAGATACAAGCTAGCT+AGG 0.459954 8_1:-70771689 None:intergenic
ATTTCTTGAGAAAAGCTTTG+AGG 0.460124 8_1:+70772489 Msa1211220:CDS
ACCTTCTCAAAGAGAAAGAT+AGG 0.463134 8_1:+70772689 Msa1211220:CDS
GATTTCAGTGATGTGGGATT+GGG 0.463594 8_1:-70771615 None:intergenic
TGATGTGGGATTGGGAGGTG+TGG 0.470405 8_1:-70771607 None:intergenic
TTTCATTTCATACCCGAAAT+GGG 0.470838 8_1:+70773696 Msa1211220:three_prime_UTR
AGAAAGAAGTAGAAGAAGAA+AGG 0.472149 8_1:-70771914 None:intergenic
AGGTGCAACAGGTCTTTCTT+CGG 0.489691 8_1:+70772373 Msa1211220:CDS
TTTGGTTGATTCAGTTTCTG+AGG 0.492605 8_1:+70773202 Msa1211220:CDS
AGACTTATGGCGAAAGAAGC+TGG 0.493873 8_1:-70771645 None:intergenic
GGTAGCAAGCCTAACTGAAA+AGG 0.493946 8_1:+70773091 Msa1211220:intron
ACCTATCTTTCTCTTTGAGA+AGG 0.495244 8_1:-70772690 None:intergenic
TTCAGTGATGTGGGATTGGG+AGG 0.501722 8_1:-70771612 None:intergenic
AAAGAGAATCAAACAAGAGA+TGG 0.506055 8_1:-70771497 None:intergenic
ATCCAAATTGTCAATTGTTG+AGG 0.508800 8_1:+70773232 Msa1211220:CDS
TGGCTCTTGTAGGATAGAAA+TGG 0.509467 8_1:+70773721 Msa1211220:three_prime_UTR
TTCATCAATCCGAGAAGAAA+CGG 0.510950 8_1:+70772443 Msa1211220:CDS
GACTCAATACAAAGTTTCAA+AGG 0.516349 8_1:-70771531 None:intergenic
TTGGTTGATTCAGTTTCTGA+GGG 0.528561 8_1:+70773203 Msa1211220:CDS
ACTCAATACAAAGTTTCAAA+GGG 0.532890 8_1:-70771530 None:intergenic
GAAAGATAGGTTACAATCTG+AGG 0.533848 8_1:+70772702 Msa1211220:CDS
AAGATGTTCAAGGAAGGAAA+AGG 0.536023 8_1:+70772353 Msa1211220:CDS
ATACAAAGTTTCAAAGGGAG+GGG 0.536751 8_1:-70771525 None:intergenic
TTCAAAACCGTCGTGCAAGA+TGG 0.537462 8_1:+70772593 Msa1211220:CDS
GATGATGATTTCAGTGATGT+GGG 0.538439 8_1:-70771621 None:intergenic
TTTCATACCCGAAATGGGTG+TGG 0.538493 8_1:+70773701 Msa1211220:three_prime_UTR
CCATTACTCCGATCAAAAGA+AGG 0.543323 8_1:-70771565 None:intergenic
ATTTGAACATGAATATCAAT+CGG 0.545738 8_1:+70773370 Msa1211220:CDS
ACCAAGCTAGCTAAAGACCT+TGG 0.547629 8_1:+70772541 Msa1211220:CDS
GATGTGGGATTGGGAGGTGT+GGG 0.548439 8_1:-70771606 None:intergenic
GATTCAGTTTCTGAGGGTGA+AGG 0.550989 8_1:+70773209 Msa1211220:CDS
ATTTACAATGCAACAAAATG+GGG 0.551950 8_1:-70773755 None:intergenic
GAAAGGAAAAGAGAATCAAG+AGG 0.552633 8_1:-70771897 None:intergenic
AAAGTCAGAGAATGGCAAGT+TGG 0.554287 8_1:+70773668 Msa1211220:three_prime_UTR
TGCGTAATAAAGTCAGAGAA+TGG 0.558093 8_1:+70773660 Msa1211220:three_prime_UTR
AATACAAAGTTTCAAAGGGA+GGG 0.558496 8_1:-70771526 None:intergenic
CGAAAATGGAGAGGATGAGA+TGG 0.561405 8_1:+70772411 Msa1211220:CDS
GATAGATAAATATATATGGC+GGG 0.563209 8_1:+70771771 Msa1211220:exon
ATATTCATGTTCAAATACAT+AGG 0.565080 8_1:-70773363 None:intergenic
TGCAACAGGTCTTTCTTCGG+AGG 0.566461 8_1:+70772376 Msa1211220:CDS
TGATAGATAAATATATATGG+CGG 0.578645 8_1:+70771770 Msa1211220:exon
TCTTGAGAAAAGCTTTGAGG+AGG 0.578737 8_1:+70772492 Msa1211220:CDS
ACTGATGGAGTGTTAGAGAC+AGG 0.581498 8_1:+70773332 Msa1211220:CDS
GACAGCCCACGTTACACTGA+TGG 0.581501 8_1:+70773317 Msa1211220:CDS
GATAAATATATATGGCGGGT+GGG 0.581991 8_1:+70771775 Msa1211220:exon
TGATGATGATTTCAGTGATG+TGG 0.582510 8_1:-70771622 None:intergenic
AGATAAATATATATGGCGGG+TGG 0.584083 8_1:+70771774 Msa1211220:exon
TACAAAGTTTCAAAGGGAGG+GGG 0.589956 8_1:-70771524 None:intergenic
GAAGAAACGGCGTCTCTCAG+TGG 0.590083 8_1:+70772456 Msa1211220:CDS
TTGATGAATTATCATGTGGC+GGG 0.592126 8_1:-70773469 None:intergenic
ATTGGGAGGTGTGGGAACAA+CGG 0.592789 8_1:-70771598 None:intergenic
CTTGATGAATTATCATGTGG+CGG 0.594488 8_1:-70773470 None:intergenic
ATCAAGTTATGGATTTCAAG+AGG 0.600284 8_1:+70773487 Msa1211220:CDS
TGAATTATCATGTGGCGGGT+CGG 0.601580 8_1:-70773465 None:intergenic
ACAAGGTGAAAGTGAAACAA+AGG 0.601903 8_1:+70773148 Msa1211220:CDS
CTTGTCGTGGCTGCAAACCA+AGG 0.609721 8_1:-70772558 None:intergenic
TTGAAGATATTAGTTCAGCA+AGG 0.615993 8_1:+70773276 Msa1211220:CDS
TGGTCTTCCATCTTGCACGA+CGG 0.616539 8_1:-70772600 None:intergenic
GAAGACCAAACAGCTTGAGA+AGG 0.620125 8_1:+70772615 Msa1211220:CDS
TGATCTTGACGAAAATGGAG+AGG 0.622056 8_1:+70772402 Msa1211220:CDS
CAAGAGGGAAAATTCAAACA+AGG 0.630062 8_1:+70773131 Msa1211220:CDS
CAATACAAAGTTTCAAAGGG+AGG 0.631773 8_1:-70771527 None:intergenic
CTCTTGTAGGATAGAAATGG+CGG 0.634642 8_1:+70773724 Msa1211220:three_prime_UTR
AACACTCCATCAGTGTAACG+TGG 0.635850 8_1:-70773323 None:intergenic
AACCAAATAGCAACTTGTCG+TGG 0.636461 8_1:-70772571 None:intergenic
TAACTTGATGAATTATCATG+TGG 0.637883 8_1:-70773473 None:intergenic
AGATACAGAGACAGAACTAG+TGG 0.648443 8_1:-70771456 None:intergenic
CATATCATTTAATAAGACCA+AGG 0.657999 8_1:-70773533 None:intergenic
GAGGTGTGGGAACAACGGCA+GGG 0.660019 8_1:-70771593 None:intergenic
AATCAACAACAAACTCCTCG+TGG 0.662080 8_1:+70771858 Msa1211220:CDS
ACTTGCAAGAGAGAAACAAG+AGG 0.662555 8_1:+70773115 Msa1211220:CDS
TCAGAAACTGAATCAACCAA+AGG 0.671154 8_1:-70773200 None:intergenic
CTTGCAAGAGAGAAACAAGA+GGG 0.688671 8_1:+70773116 Msa1211220:CDS
ACACTCCATCAGTGTAACGT+GGG 0.696078 8_1:-70773322 None:intergenic
ACAACAAGCTTGAACCAGAG+AGG 0.699556 8_1:+70772515 Msa1211220:CDS
TGTTGAGAAGAGTTTCCACG+AGG 0.738171 8_1:-70771873 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATTAATATAGTATCTTAT+AGG + chr8_1:70772023-70772042 Msa1211220:intron 10.0%
!! ATATTAATATAGTATCTTAT+AGG + chr8_1:70772023-70772042 Msa1211220:intron 10.0%
!!! ATTTTTTTCTATGAGAAAAA+TGG - chr8_1:70771410-70771429 None:intergenic 15.0%
!!! TATAAGATAAAGTTTAACTT+TGG + chr8_1:70771732-70771751 Msa1211220:five_prime_UTR 15.0%
!! TTGTGATAGATAAATATATA+TGG + chr8_1:70771767-70771786 Msa1211220:exon 15.0%
!!! AGTTTCAAGATTTTAAATAA+TGG + chr8_1:70772126-70772145 Msa1211220:intron 15.0%
!!! ATGTAGTTTTAATAAAATAG+TGG + chr8_1:70772271-70772290 Msa1211220:intron 15.0%
!!! TTTTTGTTTTGTTTTTGAAT+AGG + chr8_1:70772307-70772326 Msa1211220:intron 15.0%
!!! TTGTAAATTAATGAAACTTT+TGG + chr8_1:70773770-70773789 Msa1211220:three_prime_UTR 15.0%
!!! ATTTTTTTCTATGAGAAAAA+TGG - chr8_1:70771410-70771429 None:intergenic 15.0%
!!! TATAAGATAAAGTTTAACTT+TGG + chr8_1:70771732-70771751 Msa1211220:five_prime_UTR 15.0%
!! TTGTGATAGATAAATATATA+TGG + chr8_1:70771767-70771786 Msa1211220:exon 15.0%
!!! AGTTTCAAGATTTTAAATAA+TGG + chr8_1:70772126-70772145 Msa1211220:intron 15.0%
!!! ATGTAGTTTTAATAAAATAG+TGG + chr8_1:70772271-70772290 Msa1211220:intron 15.0%
!!! TTTTTGTTTTGTTTTTGAAT+AGG + chr8_1:70772307-70772326 Msa1211220:intron 15.0%
!!! TTGTAAATTAATGAAACTTT+TGG + chr8_1:70773770-70773789 Msa1211220:three_prime_UTR 15.0%
!!! AATTAAAGATCTAAGACTTA+TGG - chr8_1:70771661-70771680 None:intergenic 20.0%
!! TTGTATCTATATAGCTATTA+TGG + chr8_1:70771699-70771718 Msa1211220:five_prime_UTR 20.0%
!! TGATAGATAAATATATATGG+CGG + chr8_1:70771770-70771789 Msa1211220:exon 20.0%
!!! TTCAAGATTTTAAATAATGG+TGG + chr8_1:70772129-70772148 Msa1211220:intron 20.0%
!! TTATAACATAATTCAGATCA+CGG + chr8_1:70772211-70772230 Msa1211220:intron 20.0%
!!! CTTAATTGTAAATTTGAGAT+CGG + chr8_1:70772807-70772826 Msa1211220:intron 20.0%
!! ACATAAAATTCATGAAATTG+TGG + chr8_1:70773002-70773021 Msa1211220:intron 20.0%
!! ATATTCATGTTCAAATACAT+AGG - chr8_1:70773366-70773385 None:intergenic 20.0%
!! ATTTGAACATGAATATCAAT+CGG + chr8_1:70773370-70773389 Msa1211220:CDS 20.0%
!! AATTTACAATGCAACAAAAT+GGG - chr8_1:70773759-70773778 None:intergenic 20.0%
!! TAATTTACAATGCAACAAAA+TGG - chr8_1:70773760-70773779 None:intergenic 20.0%
!! TTAAAAGAATTAATGCTTTC+TGG + chr8_1:70773807-70773826 Msa1211220:three_prime_UTR 20.0%
!!! AATTAAAGATCTAAGACTTA+TGG - chr8_1:70771661-70771680 None:intergenic 20.0%
!! TTGTATCTATATAGCTATTA+TGG + chr8_1:70771699-70771718 Msa1211220:five_prime_UTR 20.0%
!! TGATAGATAAATATATATGG+CGG + chr8_1:70771770-70771789 Msa1211220:exon 20.0%
!!! TTCAAGATTTTAAATAATGG+TGG + chr8_1:70772129-70772148 Msa1211220:intron 20.0%
!! TTATAACATAATTCAGATCA+CGG + chr8_1:70772211-70772230 Msa1211220:intron 20.0%
!!! CTTAATTGTAAATTTGAGAT+CGG + chr8_1:70772807-70772826 Msa1211220:intron 20.0%
!! ACATAAAATTCATGAAATTG+TGG + chr8_1:70773002-70773021 Msa1211220:intron 20.0%
!! ATATTCATGTTCAAATACAT+AGG - chr8_1:70773366-70773385 None:intergenic 20.0%
!! ATTTGAACATGAATATCAAT+CGG + chr8_1:70773370-70773389 Msa1211220:CDS 20.0%
!! AATTTACAATGCAACAAAAT+GGG - chr8_1:70773759-70773778 None:intergenic 20.0%
!! TAATTTACAATGCAACAAAA+TGG - chr8_1:70773760-70773779 None:intergenic 20.0%
!! TTAAAAGAATTAATGCTTTC+TGG + chr8_1:70773807-70773826 Msa1211220:three_prime_UTR 20.0%
! ACTCAATACAAAGTTTCAAA+GGG - chr8_1:70771533-70771552 None:intergenic 25.0%
! GATAGATAAATATATATGGC+GGG + chr8_1:70771771-70771790 Msa1211220:exon 25.0%
!! TGCATATTTGAAATATTTGC+AGG - chr8_1:70771819-70771838 None:intergenic 25.0%
!!! ATCAATGTTTTGATGTCTTT+AGG - chr8_1:70772059-70772078 None:intergenic 25.0%
! TGAACATTAGACATGAAAAA+AGG + chr8_1:70772866-70772885 Msa1211220:intron 25.0%
!!! TCAAGTTTTGTAAAGATGTA+AGG - chr8_1:70773431-70773450 None:intergenic 25.0%
! TAACTTGATGAATTATCATG+TGG - chr8_1:70773476-70773495 None:intergenic 25.0%
! CATGATAATTCATCAAGTTA+TGG + chr8_1:70773476-70773495 Msa1211220:CDS 25.0%
! CATATCATTTAATAAGACCA+AGG - chr8_1:70773536-70773555 None:intergenic 25.0%
! ATTTACAATGCAACAAAATG+GGG - chr8_1:70773758-70773777 None:intergenic 25.0%
! ACTCAATACAAAGTTTCAAA+GGG - chr8_1:70771533-70771552 None:intergenic 25.0%
! GATAGATAAATATATATGGC+GGG + chr8_1:70771771-70771790 Msa1211220:exon 25.0%
!! TGCATATTTGAAATATTTGC+AGG - chr8_1:70771819-70771838 None:intergenic 25.0%
!!! ATCAATGTTTTGATGTCTTT+AGG - chr8_1:70772059-70772078 None:intergenic 25.0%
! TGAACATTAGACATGAAAAA+AGG + chr8_1:70772866-70772885 Msa1211220:intron 25.0%
!!! TCAAGTTTTGTAAAGATGTA+AGG - chr8_1:70773431-70773450 None:intergenic 25.0%
! TAACTTGATGAATTATCATG+TGG - chr8_1:70773476-70773495 None:intergenic 25.0%
! CATGATAATTCATCAAGTTA+TGG + chr8_1:70773476-70773495 Msa1211220:CDS 25.0%
! CATATCATTTAATAAGACCA+AGG - chr8_1:70773536-70773555 None:intergenic 25.0%
! ATTTACAATGCAACAAAATG+GGG - chr8_1:70773758-70773777 None:intergenic 25.0%
AAAGAGAATCAAACAAGAGA+TGG - chr8_1:70771500-70771519 None:intergenic 30.0%
AATACAAAGTTTCAAAGGGA+GGG - chr8_1:70771529-70771548 None:intergenic 30.0%
GACTCAATACAAAGTTTCAA+AGG - chr8_1:70771534-70771553 None:intergenic 30.0%
TATATAGATACAAGCTAGCT+AGG - chr8_1:70771692-70771711 None:intergenic 30.0%
AGAAAGAAGTAGAAGAAGAA+AGG - chr8_1:70771917-70771936 None:intergenic 30.0%
TCTTCTTCTACTTCTTTCTT+TGG + chr8_1:70771918-70771937 Msa1211220:CDS 30.0%
! AGTTTTTGATATCTCTGCAA+CGG - chr8_1:70772190-70772209 None:intergenic 30.0%
TTGAATAGGTTCAAGATCTA+TGG + chr8_1:70772321-70772340 Msa1211220:intron 30.0%
ATTTCTTGAGAAAAGCTTTG+AGG + chr8_1:70772489-70772508 Msa1211220:CDS 30.0%
TGTGGTTCACATAAAACTAT+TGG + chr8_1:70773020-70773039 Msa1211220:intron 30.0%
TCTTTGTGATGTTTCAATAC+AGG + chr8_1:70773070-70773089 Msa1211220:intron 30.0%
ACCAACAATGAATAAACCTT+TGG + chr8_1:70773184-70773203 Msa1211220:CDS 30.0%
ACCAAAGGTTTATTCATTGT+TGG - chr8_1:70773188-70773207 None:intergenic 30.0%
ATCCAAATTGTCAATTGTTG+AGG + chr8_1:70773232-70773251 Msa1211220:CDS 30.0%
TTGAAGATATTAGTTCAGCA+AGG + chr8_1:70773276-70773295 Msa1211220:CDS 30.0%
!! AGTTTTGTAAAGATGTAAGG+AGG - chr8_1:70773428-70773447 None:intergenic 30.0%
ATCAAGTTATGGATTTCAAG+AGG + chr8_1:70773487-70773506 Msa1211220:CDS 30.0%
ATTTCATTTCATACCCGAAA+TGG + chr8_1:70773695-70773714 Msa1211220:three_prime_UTR 30.0%
TTTCATTTCATACCCGAAAT+GGG + chr8_1:70773696-70773715 Msa1211220:three_prime_UTR 30.0%
AAAGAGAATCAAACAAGAGA+TGG - chr8_1:70771500-70771519 None:intergenic 30.0%
AATACAAAGTTTCAAAGGGA+GGG - chr8_1:70771529-70771548 None:intergenic 30.0%
GACTCAATACAAAGTTTCAA+AGG - chr8_1:70771534-70771553 None:intergenic 30.0%
TATATAGATACAAGCTAGCT+AGG - chr8_1:70771692-70771711 None:intergenic 30.0%
AGAAAGAAGTAGAAGAAGAA+AGG - chr8_1:70771917-70771936 None:intergenic 30.0%
TCTTCTTCTACTTCTTTCTT+TGG + chr8_1:70771918-70771937 Msa1211220:CDS 30.0%
! AGTTTTTGATATCTCTGCAA+CGG - chr8_1:70772190-70772209 None:intergenic 30.0%
TTGAATAGGTTCAAGATCTA+TGG + chr8_1:70772321-70772340 Msa1211220:intron 30.0%
ATTTCTTGAGAAAAGCTTTG+AGG + chr8_1:70772489-70772508 Msa1211220:CDS 30.0%
TGTGGTTCACATAAAACTAT+TGG + chr8_1:70773020-70773039 Msa1211220:intron 30.0%
TCTTTGTGATGTTTCAATAC+AGG + chr8_1:70773070-70773089 Msa1211220:intron 30.0%
ACCAACAATGAATAAACCTT+TGG + chr8_1:70773184-70773203 Msa1211220:CDS 30.0%
ACCAAAGGTTTATTCATTGT+TGG - chr8_1:70773188-70773207 None:intergenic 30.0%
ATCCAAATTGTCAATTGTTG+AGG + chr8_1:70773232-70773251 Msa1211220:CDS 30.0%
TTGAAGATATTAGTTCAGCA+AGG + chr8_1:70773276-70773295 Msa1211220:CDS 30.0%
!! AGTTTTGTAAAGATGTAAGG+AGG - chr8_1:70773428-70773447 None:intergenic 30.0%
ATCAAGTTATGGATTTCAAG+AGG + chr8_1:70773487-70773506 Msa1211220:CDS 30.0%
ATTTCATTTCATACCCGAAA+TGG + chr8_1:70773695-70773714 Msa1211220:three_prime_UTR 30.0%
TTTCATTTCATACCCGAAAT+GGG + chr8_1:70773696-70773715 Msa1211220:three_prime_UTR 30.0%
! TGAGAAAAATGGACTCTGTT+GGG - chr8_1:70771399-70771418 None:intergenic 35.0%
! ATGAGAAAAATGGACTCTGT+TGG - chr8_1:70771400-70771419 None:intergenic 35.0%
ATACAAAGTTTCAAAGGGAG+GGG - chr8_1:70771528-70771547 None:intergenic 35.0%
CAATACAAAGTTTCAAAGGG+AGG - chr8_1:70771530-70771549 None:intergenic 35.0%
! TCTTGTTGCCTTCTTTTGAT+CGG + chr8_1:70771557-70771576 Msa1211220:five_prime_UTR 35.0%
! CTTCTTTTGATCGGAGTAAT+GGG + chr8_1:70771566-70771585 Msa1211220:five_prime_UTR 35.0%
GATGATGATTTCAGTGATGT+GGG - chr8_1:70771624-70771643 None:intergenic 35.0%
! TGATGATGATTTCAGTGATG+TGG - chr8_1:70771625-70771644 None:intergenic 35.0%
! AGATAAATATATATGGCGGG+TGG + chr8_1:70771774-70771793 Msa1211220:exon 35.0%
!! GATAAATATATATGGCGGGT+GGG + chr8_1:70771775-70771794 Msa1211220:exon 35.0%
GAAAGGAAAAGAGAATCAAG+AGG - chr8_1:70771900-70771919 None:intergenic 35.0%
!!! GTGAGTTTTGAAGATGTTCA+AGG + chr8_1:70772343-70772362 Msa1211220:CDS 35.0%
!!! GTTTTGAAGATGTTCAAGGA+AGG + chr8_1:70772347-70772366 Msa1211220:CDS 35.0%
AAGATGTTCAAGGAAGGAAA+AGG + chr8_1:70772353-70772372 Msa1211220:CDS 35.0%
GGATTTGATCTTGACGAAAA+TGG + chr8_1:70772397-70772416 Msa1211220:CDS 35.0%
TTCATCAATCCGAGAAGAAA+CGG + chr8_1:70772443-70772462 Msa1211220:CDS 35.0%
ATAATCCTTCTCAAGCTGTT+TGG - chr8_1:70772623-70772642 None:intergenic 35.0%
ACCTTCTCAAAGAGAAAGAT+AGG + chr8_1:70772689-70772708 Msa1211220:CDS 35.0%
! ACCTATCTTTCTCTTTGAGA+AGG - chr8_1:70772693-70772712 None:intergenic 35.0%
GAAAGATAGGTTACAATCTG+AGG + chr8_1:70772702-70772721 Msa1211220:CDS 35.0%
! TTGCAAGTACCTTTTCAGTT+AGG - chr8_1:70773103-70773122 None:intergenic 35.0%
CAAGAGGGAAAATTCAAACA+AGG + chr8_1:70773131-70773150 Msa1211220:CDS 35.0%
ACAAGGTGAAAGTGAAACAA+AGG + chr8_1:70773148-70773167 Msa1211220:CDS 35.0%
TGAAACAAAGGAATTCTTGC+AGG + chr8_1:70773160-70773179 Msa1211220:CDS 35.0%
TCAGAAACTGAATCAACCAA+AGG - chr8_1:70773203-70773222 None:intergenic 35.0%
! TTTGGTTGATTCAGTTTCTG+AGG + chr8_1:70773202-70773221 Msa1211220:CDS 35.0%
! TTGGTTGATTCAGTTTCTGA+GGG + chr8_1:70773203-70773222 Msa1211220:CDS 35.0%
AGCCTCAACAATTGACAATT+TGG - chr8_1:70773237-70773256 None:intergenic 35.0%
TGTCTTCTTCATCTTGTGAT+AGG - chr8_1:70773397-70773416 None:intergenic 35.0%
TTGATGAATTATCATGTGGC+GGG - chr8_1:70773472-70773491 None:intergenic 35.0%
CTTGATGAATTATCATGTGG+CGG - chr8_1:70773473-70773492 None:intergenic 35.0%
AAGATCATCATCAAGCTCTT+TGG + chr8_1:70773510-70773529 Msa1211220:CDS 35.0%
TCACTCACTTTGCACAAAAA+GGG - chr8_1:70773622-70773641 None:intergenic 35.0%
TGCGTAATAAAGTCAGAGAA+TGG + chr8_1:70773660-70773679 Msa1211220:three_prime_UTR 35.0%
! TGAGAAAAATGGACTCTGTT+GGG - chr8_1:70771399-70771418 None:intergenic 35.0%
! ATGAGAAAAATGGACTCTGT+TGG - chr8_1:70771400-70771419 None:intergenic 35.0%
ATACAAAGTTTCAAAGGGAG+GGG - chr8_1:70771528-70771547 None:intergenic 35.0%
CAATACAAAGTTTCAAAGGG+AGG - chr8_1:70771530-70771549 None:intergenic 35.0%
! TCTTGTTGCCTTCTTTTGAT+CGG + chr8_1:70771557-70771576 Msa1211220:five_prime_UTR 35.0%
! CTTCTTTTGATCGGAGTAAT+GGG + chr8_1:70771566-70771585 Msa1211220:five_prime_UTR 35.0%
GATGATGATTTCAGTGATGT+GGG - chr8_1:70771624-70771643 None:intergenic 35.0%
! TGATGATGATTTCAGTGATG+TGG - chr8_1:70771625-70771644 None:intergenic 35.0%
! AGATAAATATATATGGCGGG+TGG + chr8_1:70771774-70771793 Msa1211220:exon 35.0%
!! GATAAATATATATGGCGGGT+GGG + chr8_1:70771775-70771794 Msa1211220:exon 35.0%
GAAAGGAAAAGAGAATCAAG+AGG - chr8_1:70771900-70771919 None:intergenic 35.0%
!!! GTGAGTTTTGAAGATGTTCA+AGG + chr8_1:70772343-70772362 Msa1211220:CDS 35.0%
!!! GTTTTGAAGATGTTCAAGGA+AGG + chr8_1:70772347-70772366 Msa1211220:CDS 35.0%
AAGATGTTCAAGGAAGGAAA+AGG + chr8_1:70772353-70772372 Msa1211220:CDS 35.0%
GGATTTGATCTTGACGAAAA+TGG + chr8_1:70772397-70772416 Msa1211220:CDS 35.0%
TTCATCAATCCGAGAAGAAA+CGG + chr8_1:70772443-70772462 Msa1211220:CDS 35.0%
ATAATCCTTCTCAAGCTGTT+TGG - chr8_1:70772623-70772642 None:intergenic 35.0%
ACCTTCTCAAAGAGAAAGAT+AGG + chr8_1:70772689-70772708 Msa1211220:CDS 35.0%
! ACCTATCTTTCTCTTTGAGA+AGG - chr8_1:70772693-70772712 None:intergenic 35.0%
GAAAGATAGGTTACAATCTG+AGG + chr8_1:70772702-70772721 Msa1211220:CDS 35.0%
! TTGCAAGTACCTTTTCAGTT+AGG - chr8_1:70773103-70773122 None:intergenic 35.0%
CAAGAGGGAAAATTCAAACA+AGG + chr8_1:70773131-70773150 Msa1211220:CDS 35.0%
ACAAGGTGAAAGTGAAACAA+AGG + chr8_1:70773148-70773167 Msa1211220:CDS 35.0%
TGAAACAAAGGAATTCTTGC+AGG + chr8_1:70773160-70773179 Msa1211220:CDS 35.0%
TCAGAAACTGAATCAACCAA+AGG - chr8_1:70773203-70773222 None:intergenic 35.0%
! TTTGGTTGATTCAGTTTCTG+AGG + chr8_1:70773202-70773221 Msa1211220:CDS 35.0%
! TTGGTTGATTCAGTTTCTGA+GGG + chr8_1:70773203-70773222 Msa1211220:CDS 35.0%
AGCCTCAACAATTGACAATT+TGG - chr8_1:70773237-70773256 None:intergenic 35.0%
TGTCTTCTTCATCTTGTGAT+AGG - chr8_1:70773397-70773416 None:intergenic 35.0%
TTGATGAATTATCATGTGGC+GGG - chr8_1:70773472-70773491 None:intergenic 35.0%
CTTGATGAATTATCATGTGG+CGG - chr8_1:70773473-70773492 None:intergenic 35.0%
AAGATCATCATCAAGCTCTT+TGG + chr8_1:70773510-70773529 Msa1211220:CDS 35.0%
TCACTCACTTTGCACAAAAA+GGG - chr8_1:70773622-70773641 None:intergenic 35.0%
TGCGTAATAAAGTCAGAGAA+TGG + chr8_1:70773660-70773679 Msa1211220:three_prime_UTR 35.0%
AGATACAGAGACAGAACTAG+TGG - chr8_1:70771459-70771478 None:intergenic 40.0%
TACAAAGTTTCAAAGGGAGG+GGG - chr8_1:70771527-70771546 None:intergenic 40.0%
CCATTACTCCGATCAAAAGA+AGG - chr8_1:70771568-70771587 None:intergenic 40.0%
! CCTTCTTTTGATCGGAGTAA+TGG + chr8_1:70771565-70771584 Msa1211220:five_prime_UTR 40.0%
GATTTCAGTGATGTGGGATT+GGG - chr8_1:70771618-70771637 None:intergenic 40.0%
TGATTTCAGTGATGTGGGAT+TGG - chr8_1:70771619-70771638 None:intergenic 40.0%
!!! GGTGGGAGAGTTTTTTCAAA+TGG + chr8_1:70771792-70771811 Msa1211220:CDS 40.0%
AATCAACAACAAACTCCTCG+TGG + chr8_1:70771858-70771877 Msa1211220:CDS 40.0%
TAGTATCTTATAGGCCGATG+CGG + chr8_1:70772032-70772051 Msa1211220:intron 40.0%
TGATCTTGACGAAAATGGAG+AGG + chr8_1:70772402-70772421 Msa1211220:CDS 40.0%
!! TCTTGAGAAAAGCTTTGAGG+AGG + chr8_1:70772492-70772511 Msa1211220:CDS 40.0%
AACCAAATAGCAACTTGTCG+TGG - chr8_1:70772574-70772593 None:intergenic 40.0%
ACTTGCAAGAGAGAAACAAG+AGG + chr8_1:70773115-70773134 Msa1211220:CDS 40.0%
CTTGCAAGAGAGAAACAAGA+GGG + chr8_1:70773116-70773135 Msa1211220:CDS 40.0%
TTCAGCAAGGAGTGACATAT+TGG + chr8_1:70773289-70773308 Msa1211220:CDS 40.0%
CTCACTCACTTTGCACAAAA+AGG - chr8_1:70773623-70773642 None:intergenic 40.0%
AAAGTCAGAGAATGGCAAGT+TGG + chr8_1:70773668-70773687 Msa1211220:three_prime_UTR 40.0%
TGGCTCTTGTAGGATAGAAA+TGG + chr8_1:70773721-70773740 Msa1211220:three_prime_UTR 40.0%
CTCTTGTAGGATAGAAATGG+CGG + chr8_1:70773724-70773743 Msa1211220:three_prime_UTR 40.0%
AGATACAGAGACAGAACTAG+TGG - chr8_1:70771459-70771478 None:intergenic 40.0%
TACAAAGTTTCAAAGGGAGG+GGG - chr8_1:70771527-70771546 None:intergenic 40.0%
CCATTACTCCGATCAAAAGA+AGG - chr8_1:70771568-70771587 None:intergenic 40.0%
! CCTTCTTTTGATCGGAGTAA+TGG + chr8_1:70771565-70771584 Msa1211220:five_prime_UTR 40.0%
GATTTCAGTGATGTGGGATT+GGG - chr8_1:70771618-70771637 None:intergenic 40.0%
TGATTTCAGTGATGTGGGAT+TGG - chr8_1:70771619-70771638 None:intergenic 40.0%
!!! GGTGGGAGAGTTTTTTCAAA+TGG + chr8_1:70771792-70771811 Msa1211220:CDS 40.0%
AATCAACAACAAACTCCTCG+TGG + chr8_1:70771858-70771877 Msa1211220:CDS 40.0%
TAGTATCTTATAGGCCGATG+CGG + chr8_1:70772032-70772051 Msa1211220:intron 40.0%
TGATCTTGACGAAAATGGAG+AGG + chr8_1:70772402-70772421 Msa1211220:CDS 40.0%
!! TCTTGAGAAAAGCTTTGAGG+AGG + chr8_1:70772492-70772511 Msa1211220:CDS 40.0%
AACCAAATAGCAACTTGTCG+TGG - chr8_1:70772574-70772593 None:intergenic 40.0%
ACTTGCAAGAGAGAAACAAG+AGG + chr8_1:70773115-70773134 Msa1211220:CDS 40.0%
CTTGCAAGAGAGAAACAAGA+GGG + chr8_1:70773116-70773135 Msa1211220:CDS 40.0%
TTCAGCAAGGAGTGACATAT+TGG + chr8_1:70773289-70773308 Msa1211220:CDS 40.0%
CTCACTCACTTTGCACAAAA+AGG - chr8_1:70773623-70773642 None:intergenic 40.0%
AAAGTCAGAGAATGGCAAGT+TGG + chr8_1:70773668-70773687 Msa1211220:three_prime_UTR 40.0%
TGGCTCTTGTAGGATAGAAA+TGG + chr8_1:70773721-70773740 Msa1211220:three_prime_UTR 40.0%
CTCTTGTAGGATAGAAATGG+CGG + chr8_1:70773724-70773743 Msa1211220:three_prime_UTR 40.0%
AGACTTATGGCGAAAGAAGC+TGG - chr8_1:70771648-70771667 None:intergenic 45.0%
TGTTGAGAAGAGTTTCCACG+AGG - chr8_1:70771876-70771895 None:intergenic 45.0%
!! TGATGTCTTTAGGACCGCAT+CGG - chr8_1:70772049-70772068 None:intergenic 45.0%
TGCGATTCAGATTGCAATCG+TGG + chr8_1:70772081-70772100 Msa1211220:intron 45.0%
! AAGGAAGGAAAAGGTGCAAC+AGG + chr8_1:70772362-70772381 Msa1211220:CDS 45.0%
AGGTGCAACAGGTCTTTCTT+CGG + chr8_1:70772373-70772392 Msa1211220:CDS 45.0%
CGAAAATGGAGAGGATGAGA+TGG + chr8_1:70772411-70772430 Msa1211220:CDS 45.0%
ACAACAAGCTTGAACCAGAG+AGG + chr8_1:70772515-70772534 Msa1211220:CDS 45.0%
ACCAAGCTAGCTAAAGACCT+TGG + chr8_1:70772541-70772560 Msa1211220:CDS 45.0%
ACCAAGGTCTTTAGCTAGCT+TGG - chr8_1:70772545-70772564 None:intergenic 45.0%
! AGCCACGACAAGTTGCTATT+TGG + chr8_1:70772569-70772588 Msa1211220:CDS 45.0%
TTCAAAACCGTCGTGCAAGA+TGG + chr8_1:70772593-70772612 Msa1211220:CDS 45.0%
GAAGACCAAACAGCTTGAGA+AGG + chr8_1:70772615-70772634 Msa1211220:CDS 45.0%
GGTAGCAAGCCTAACTGAAA+AGG + chr8_1:70773091-70773110 Msa1211220:intron 45.0%
! GATTCAGTTTCTGAGGGTGA+AGG + chr8_1:70773209-70773228 Msa1211220:CDS 45.0%
ACACTCCATCAGTGTAACGT+GGG - chr8_1:70773325-70773344 None:intergenic 45.0%
AACACTCCATCAGTGTAACG+TGG - chr8_1:70773326-70773345 None:intergenic 45.0%
! ACTGATGGAGTGTTAGAGAC+AGG + chr8_1:70773332-70773351 Msa1211220:CDS 45.0%
!! TGAATTATCATGTGGCGGGT+CGG - chr8_1:70773468-70773487 None:intergenic 45.0%
ATCATCAAGCTCTTTGGCCT+TGG + chr8_1:70773516-70773535 Msa1211220:CDS 45.0%
TTTCATACCCGAAATGGGTG+TGG + chr8_1:70773701-70773720 Msa1211220:three_prime_UTR 45.0%
TACAAGAGCCACACCCATTT+CGG - chr8_1:70773712-70773731 None:intergenic 45.0%
AGACTTATGGCGAAAGAAGC+TGG - chr8_1:70771648-70771667 None:intergenic 45.0%
TGTTGAGAAGAGTTTCCACG+AGG - chr8_1:70771876-70771895 None:intergenic 45.0%
!! TGATGTCTTTAGGACCGCAT+CGG - chr8_1:70772049-70772068 None:intergenic 45.0%
TGCGATTCAGATTGCAATCG+TGG + chr8_1:70772081-70772100 Msa1211220:intron 45.0%
! AAGGAAGGAAAAGGTGCAAC+AGG + chr8_1:70772362-70772381 Msa1211220:CDS 45.0%
AGGTGCAACAGGTCTTTCTT+CGG + chr8_1:70772373-70772392 Msa1211220:CDS 45.0%
CGAAAATGGAGAGGATGAGA+TGG + chr8_1:70772411-70772430 Msa1211220:CDS 45.0%
ACAACAAGCTTGAACCAGAG+AGG + chr8_1:70772515-70772534 Msa1211220:CDS 45.0%
ACCAAGCTAGCTAAAGACCT+TGG + chr8_1:70772541-70772560 Msa1211220:CDS 45.0%
ACCAAGGTCTTTAGCTAGCT+TGG - chr8_1:70772545-70772564 None:intergenic 45.0%
! AGCCACGACAAGTTGCTATT+TGG + chr8_1:70772569-70772588 Msa1211220:CDS 45.0%
TTCAAAACCGTCGTGCAAGA+TGG + chr8_1:70772593-70772612 Msa1211220:CDS 45.0%
GAAGACCAAACAGCTTGAGA+AGG + chr8_1:70772615-70772634 Msa1211220:CDS 45.0%
GGTAGCAAGCCTAACTGAAA+AGG + chr8_1:70773091-70773110 Msa1211220:intron 45.0%
! GATTCAGTTTCTGAGGGTGA+AGG + chr8_1:70773209-70773228 Msa1211220:CDS 45.0%
ACACTCCATCAGTGTAACGT+GGG - chr8_1:70773325-70773344 None:intergenic 45.0%
AACACTCCATCAGTGTAACG+TGG - chr8_1:70773326-70773345 None:intergenic 45.0%
! ACTGATGGAGTGTTAGAGAC+AGG + chr8_1:70773332-70773351 Msa1211220:CDS 45.0%
!! TGAATTATCATGTGGCGGGT+CGG - chr8_1:70773468-70773487 None:intergenic 45.0%
ATCATCAAGCTCTTTGGCCT+TGG + chr8_1:70773516-70773535 Msa1211220:CDS 45.0%
TTTCATACCCGAAATGGGTG+TGG + chr8_1:70773701-70773720 Msa1211220:three_prime_UTR 45.0%
TACAAGAGCCACACCCATTT+CGG - chr8_1:70773712-70773731 None:intergenic 45.0%
! ATTGGGAGGTGTGGGAACAA+CGG - chr8_1:70771601-70771620 None:intergenic 50.0%
TTCAGTGATGTGGGATTGGG+AGG - chr8_1:70771615-70771634 None:intergenic 50.0%
TGCAACAGGTCTTTCTTCGG+AGG + chr8_1:70772376-70772395 Msa1211220:CDS 50.0%
TGAGAGACGCCGTTTCTTCT+CGG - chr8_1:70772455-70772474 None:intergenic 50.0%
!! GCTAGCTTGGTTTTCCTCTC+TGG - chr8_1:70772532-70772551 None:intergenic 50.0%
TGGTCTTCCATCTTGCACGA+CGG - chr8_1:70772603-70772622 None:intergenic 50.0%
ACAAGAGCCACACCCATTTC+GGG - chr8_1:70773711-70773730 None:intergenic 50.0%
GAAATGGGTGTGGCTCTTGT+AGG + chr8_1:70773711-70773730 Msa1211220:three_prime_UTR 50.0%
! ATTGGGAGGTGTGGGAACAA+CGG - chr8_1:70771601-70771620 None:intergenic 50.0%
TTCAGTGATGTGGGATTGGG+AGG - chr8_1:70771615-70771634 None:intergenic 50.0%
TGCAACAGGTCTTTCTTCGG+AGG + chr8_1:70772376-70772395 Msa1211220:CDS 50.0%
TGAGAGACGCCGTTTCTTCT+CGG - chr8_1:70772455-70772474 None:intergenic 50.0%
!! GCTAGCTTGGTTTTCCTCTC+TGG - chr8_1:70772532-70772551 None:intergenic 50.0%
TGGTCTTCCATCTTGCACGA+CGG - chr8_1:70772603-70772622 None:intergenic 50.0%
ACAAGAGCCACACCCATTTC+GGG - chr8_1:70773711-70773730 None:intergenic 50.0%
GAAATGGGTGTGGCTCTTGT+AGG + chr8_1:70773711-70773730 Msa1211220:three_prime_UTR 50.0%
! GATGTGGGATTGGGAGGTGT+GGG - chr8_1:70771609-70771628 None:intergenic 55.0%
TGATGTGGGATTGGGAGGTG+TGG - chr8_1:70771610-70771629 None:intergenic 55.0%
GAAGAAACGGCGTCTCTCAG+TGG + chr8_1:70772456-70772475 Msa1211220:CDS 55.0%
CTTGTCGTGGCTGCAAACCA+AGG - chr8_1:70772561-70772580 None:intergenic 55.0%
GACAGCCCACGTTACACTGA+TGG + chr8_1:70773317-70773336 Msa1211220:CDS 55.0%
! GATGTGGGATTGGGAGGTGT+GGG - chr8_1:70771609-70771628 None:intergenic 55.0%
TGATGTGGGATTGGGAGGTG+TGG - chr8_1:70771610-70771629 None:intergenic 55.0%
GAAGAAACGGCGTCTCTCAG+TGG + chr8_1:70772456-70772475 Msa1211220:CDS 55.0%
CTTGTCGTGGCTGCAAACCA+AGG - chr8_1:70772561-70772580 None:intergenic 55.0%
GACAGCCCACGTTACACTGA+TGG + chr8_1:70773317-70773336 Msa1211220:CDS 55.0%
GAGGTGTGGGAACAACGGCA+GGG - chr8_1:70771596-70771615 None:intergenic 60.0%
GAGGTGTGGGAACAACGGCA+GGG - chr8_1:70771596-70771615 None:intergenic 60.0%
! GGAGGTGTGGGAACAACGGC+AGG - chr8_1:70771597-70771616 None:intergenic 65.0%
! GGAGGTGTGGGAACAACGGC+AGG - chr8_1:70771597-70771616 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 70771390 70773832 70771390 ID=Msa1211220;Name=Msa1211220
chr8_1 mRNA 70771390 70773832 70771390 ID=Msa1211220-mRNA-1;Parent=Msa1211220;Name=Msa1211220-mRNA-1;_AED=0.00;_eAED=0.00;_QI=396|1|1|1|1|1|3|285|334
chr8_1 exon 70771390 70771939 70771390 ID=Msa1211220-mRNA-1:exon:23674;Parent=Msa1211220-mRNA-1
chr8_1 exon 70772329 70772723 70772329 ID=Msa1211220-mRNA-1:exon:23675;Parent=Msa1211220-mRNA-1
chr8_1 exon 70773092 70773832 70773092 ID=Msa1211220-mRNA-1:exon:23676;Parent=Msa1211220-mRNA-1
chr8_1 five_prime_UTR 70771390 70771785 70771390 ID=Msa1211220-mRNA-1:five_prime_utr;Parent=Msa1211220-mRNA-1
chr8_1 CDS 70771786 70771939 70771786 ID=Msa1211220-mRNA-1:cds;Parent=Msa1211220-mRNA-1
chr8_1 CDS 70772329 70772723 70772329 ID=Msa1211220-mRNA-1:cds;Parent=Msa1211220-mRNA-1
chr8_1 CDS 70773092 70773547 70773092 ID=Msa1211220-mRNA-1:cds;Parent=Msa1211220-mRNA-1
chr8_1 three_prime_UTR 70773548 70773832 70773548 ID=Msa1211220-mRNA-1:three_prime_utr;Parent=Msa1211220-mRNA-1
Gene Sequence

>Msa1211220

ATGGCGGGTGGGAGAGTTTTTTCAAATGGTCCTGCAAATATTTCAAATATGCATATGAATATTTTGCTTCAGAATCAACAACAAACTCCTCGTGGAAACTCTTCTCAACAACCTCTTGATTCTCTTTTCCTTTCTTCTTCTACTTCTTTCTTTGGTTCAAGATCTATGGTGAGTTTTGAAGATGTTCAAGGAAGGAAAAGGTGCAACAGGTCTTTCTTCGGAGGATTTGATCTTGACGAAAATGGAGAGGATGAGATGGATGAGTACTTTCATCAATCCGAGAAGAAACGGCGTCTCTCAGTGGATCAAGTTCAATTTCTTGAGAAAAGCTTTGAGGAGGACAACAAGCTTGAACCAGAGAGGAAAACCAAGCTAGCTAAAGACCTTGGTTTGCAGCCACGACAAGTTGCTATTTGGTTTCAAAACCGTCGTGCAAGATGGAAGACCAAACAGCTTGAGAAGGATTATGATTCTCTTAATGATAGTTATGAGTCTCTTAAGACAGATTATGACAACCTTCTCAAAGAGAAAGATAGGTTACAATCTGAGGTAGCAAGCCTAACTGAAAAGGTACTTGCAAGAGAGAAACAAGAGGGAAAATTCAAACAAGGTGAAAGTGAAACAAAGGAATTCTTGCAGGAACCAACAATGAATAAACCTTTGGTTGATTCAGTTTCTGAGGGTGAAGGATCCAAATTGTCAATTGTTGAGGCTTCTAATAACAATAACAAACTTGAAGATATTAGTTCAGCAAGGAGTGACATATTGGATTGTGACAGCCCACGTTACACTGATGGAGTGTTAGAGACAGGTGATTCTTCCTATGTATTTGAACATGAATATCAATCGGACCTATCACAAGATGAAGAAGACAATTTATTGCCTCCTTACATCTTTACAAAACTTGAAGATGTGAATTACTCCGACCCGCCACATGATAATTCATCAAGTTATGGATTTCAAGAGGAAGATCATCATCAAGCTCTTTGGCCTTGGTCTTATTAA
Protein sequence

>Msa1211220

MAGGRVFSNGPANISNMHMNILLQNQQQTPRGNSSQQPLDSLFLSSSTSFFGSRSMVSFEDVQGRKRCNRSFFGGFDLDENGEDEMDEYFHQSEKKRRLSVDQVQFLEKSFEEDNKLEPERKTKLAKDLGLQPRQVAIWFQNRRARWKTKQLEKDYDSLNDSYESLKTDYDNLLKEKDRLQSEVASLTEKVLAREKQEGKFKQGESETKEFLQEPTMNKPLVDSVSEGEGSKLSIVEASNNNNKLEDISSARSDILDCDSPRYTDGVLETGDSSYVFEHEYQSDLSQDEEDNLLPPYIFTKLEDVNYSDPPHDNSSSYGFQEEDHHQALWPWSY*