Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1213320 | XP_013458033.1 | 94.498 | 618 | 28 | 4 | 1 | 616 | 1 | 614 | 0.0 | 1179 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1213320 | A0A072UQF4 | 94.498 | 618 | 28 | 4 | 1 | 616 | 1 | 614 | 0.0 | 1179 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1213320 | TR | PHD |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1213320 | Msa1300270 | 0.860582 | 1.868285e-63 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1213320 | MtrunA17_Chr4g0061801 | 94.498 | 618 | 28 | 4 | 1 | 616 | 1 | 614 | 0.0 | 1179 |
| Msa1213320 | MtrunA17_Chr7g0271951 | 42.405 | 158 | 85 | 4 | 32 | 187 | 426 | 579 | 4.43e-34 | 138 |
| Msa1213320 | MtrunA17_Chr7g0271951 | 43.000 | 100 | 54 | 2 | 514 | 611 | 794 | 892 | 1.34e-13 | 74.3 |
| Msa1213320 | MtrunA17_Chr8g0388341 | 34.426 | 183 | 86 | 10 | 32 | 189 | 34 | 207 | 7.33e-18 | 88.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1213320 | AT3G05670.3 | 33.091 | 275 | 169 | 8 | 32 | 297 | 413 | 681 | 3.80e-36 | 145 |
| Msa1213320 | AT3G05670.1 | 33.091 | 275 | 169 | 8 | 32 | 297 | 413 | 681 | 3.80e-36 | 145 |
| Msa1213320 | AT3G05670.2 | 33.091 | 275 | 169 | 8 | 32 | 297 | 413 | 681 | 3.80e-36 | 145 |
| Msa1213320 | AT4G10930.2 | 29.193 | 161 | 82 | 7 | 32 | 165 | 31 | 186 | 6.24e-12 | 69.3 |
| Msa1213320 | AT4G10930.1 | 29.193 | 161 | 82 | 7 | 32 | 165 | 31 | 186 | 6.25e-12 | 69.3 |
Find 152 sgRNAs with CRISPR-Local
Find 265 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAACTGCTTCGTGAAAAT+TGG | 0.164253 | 8_1:-73464396 | Msa1213320:CDS |
| TGAATTCTACTTGTTCTTCT+AGG | 0.221047 | 8_1:+73464118 | None:intergenic |
| CTTTAAGAAGTGGTAAATTA+AGG | 0.236521 | 8_1:-73464369 | Msa1213320:CDS |
| CTGATATTCCTTTACTTGAT+AGG | 0.247121 | 8_1:-73464477 | Msa1213320:CDS |
| ATCCTTCTAAATGAGTATTA+TGG | 0.255331 | 8_1:+73463855 | None:intergenic |
| TTTCAATTTCTTTACCATTT+AGG | 0.268700 | 8_1:+73462864 | None:intergenic |
| GTCACACTTCTCCTGCATTT+TGG | 0.285478 | 8_1:+73463982 | None:intergenic |
| TTAGCTATCAATAAACAATT+AGG | 0.302117 | 8_1:-73463539 | Msa1213320:intron |
| GTACATAAAGTCTAATGTTC+TGG | 0.310120 | 8_1:+73464006 | None:intergenic |
| AAAGATCACATATTAGTATA+AGG | 0.325967 | 8_1:+73464740 | None:intergenic |
| TTAAATATTGTGAGAGGAAC+AGG | 0.351776 | 8_1:-73464559 | Msa1213320:CDS |
| ACTACTAGTATGGACCTTAC+TGG | 0.359804 | 8_1:+73463814 | None:intergenic |
| ACTTCTGAAACTGAAGATTA+TGG | 0.364745 | 8_1:+73463142 | None:intergenic |
| AAAGCATTGCCGGCAACAAT+TGG | 0.364853 | 8_1:+73463107 | None:intergenic |
| TTCTGCTCAGAAGACAAATT+CGG | 0.369067 | 8_1:+73466018 | None:intergenic |
| ATTAGATGATTCACATTCAA+TGG | 0.372803 | 8_1:-73464272 | Msa1213320:CDS |
| TGTGGGCACTACTACTAGTA+TGG | 0.376382 | 8_1:+73463804 | None:intergenic |
| ATTTAATGCCCAATTGTTGC+CGG | 0.388879 | 8_1:-73463116 | Msa1213320:CDS |
| TTGCCTTGCAACTACCTTGA+AGG | 0.388899 | 8_1:+73463251 | None:intergenic |
| AATTTAGTTTAACAAGAGAT+TGG | 0.390354 | 8_1:+73463570 | None:intergenic |
| CGAAGACATGAAAGCATTGC+CGG | 0.390475 | 8_1:+73463097 | None:intergenic |
| CTTCGTTTGCATCATGGAAT+GGG | 0.391668 | 8_1:-73465813 | Msa1213320:CDS |
| AACCATAATACTCATTTAGA+AGG | 0.398353 | 8_1:-73463857 | Msa1213320:CDS |
| CATTGTGACAGGGAGCTTTG+TGG | 0.398680 | 8_1:+73463786 | None:intergenic |
| CGACACAGGTTTCTTACCTT+CGG | 0.400888 | 8_1:+73464444 | None:intergenic |
| AATATCCACATCCTTCTTAG+AGG | 0.404123 | 8_1:+73463670 | None:intergenic |
| GGCATTTCTTTCATTGTGAC+AGG | 0.404307 | 8_1:+73463775 | None:intergenic |
| TTGCCTGAGGCCCTAAGCTA+AGG | 0.405798 | 8_1:+73462946 | None:intergenic |
| ATACTCATTTAGAAGGATAC+AGG | 0.406220 | 8_1:-73463850 | Msa1213320:CDS |
| GAAAACAATAATCACTGAAA+TGG | 0.406971 | 8_1:+73462999 | None:intergenic |
| TTCAGGTTGCCCCTTAGCTT+AGG | 0.407433 | 8_1:-73462957 | Msa1213320:three_prime_UTR |
| GCTTCGTTTGCATCATGGAA+TGG | 0.409819 | 8_1:-73465814 | Msa1213320:CDS |
| AAGAGGTTGGCTAAAAGCTT+CGG | 0.412773 | 8_1:-73463635 | Msa1213320:CDS |
| TGATATTCCTTTACTTGATA+GGG | 0.413112 | 8_1:-73464476 | Msa1213320:CDS |
| ACAAAGGCAGTCTGCTTACT+TGG | 0.414772 | 8_1:-73463744 | Msa1213320:CDS |
| AAGAACAAGTAGAATTCAAC+AGG | 0.416343 | 8_1:-73464113 | Msa1213320:CDS |
| CGTTCAGCATTAGAATCAAC+AGG | 0.416387 | 8_1:+73464799 | None:intergenic |
| TGACAAAACCAATCACCTTC+AGG | 0.418997 | 8_1:+73464670 | None:intergenic |
| GCAACTGTGTAAATAAATTC+AGG | 0.421174 | 8_1:-73462974 | Msa1213320:three_prime_UTR |
| TCAGGTTGCCCCTTAGCTTA+GGG | 0.421397 | 8_1:-73462956 | Msa1213320:three_prime_UTR |
| ATTGTGACAGGGAGCTTTGT+GGG | 0.421453 | 8_1:+73463787 | None:intergenic |
| TAAGATTCCTATTCGCGATC+AGG | 0.423084 | 8_1:-73465696 | Msa1213320:intron |
| TCCTCTCACAATATTTAAGA+TGG | 0.424076 | 8_1:+73464564 | None:intergenic |
| AGAGGTTGGCTAAAAGCTTC+GGG | 0.425317 | 8_1:-73463634 | Msa1213320:CDS |
| TCATGATTGTGCTGTTTCCC+TGG | 0.425637 | 8_1:-73464650 | Msa1213320:CDS |
| CATAGCAAAACATTTCAATC+TGG | 0.432016 | 8_1:-73464343 | Msa1213320:CDS |
| TATAATTAGCATTAGTCTCC+AGG | 0.433571 | 8_1:+73464632 | None:intergenic |
| GGCAAGCAGCCAAGATGGTA+TGG | 0.433665 | 8_1:+73463223 | None:intergenic |
| ACACCGTTCCTGAAGGTGAT+TGG | 0.439694 | 8_1:-73464678 | Msa1213320:CDS |
| AGACTGCCTTTGTTCCTTTG+AGG | 0.442729 | 8_1:+73463754 | None:intergenic |
| TACATAAAGTCTAATGTTCT+GGG | 0.448158 | 8_1:+73464007 | None:intergenic |
| AAGATGACGTTGACAAAGCT+TGG | 0.449233 | 8_1:-73464177 | Msa1213320:CDS |
| TCTGCTCAGAAGACAAATTC+GGG | 0.455964 | 8_1:+73466019 | None:intergenic |
| CGCAGGTGTCGAAACCTTCA+AGG | 0.466026 | 8_1:-73463265 | Msa1213320:intron |
| ACTGAAGATTATGGTCAGTA+TGG | 0.467842 | 8_1:+73463151 | None:intergenic |
| AAATCATCGGTCTCCGATGT+TGG | 0.470526 | 8_1:-73463933 | Msa1213320:CDS |
| GCTTACTTGGTAACTTCAGT+AGG | 0.472358 | 8_1:-73463731 | Msa1213320:CDS |
| AATCATCGGTCTCCGATGTT+GGG | 0.475724 | 8_1:-73463932 | Msa1213320:CDS |
| TACGAACGTTTGAGAATCTC+TGG | 0.476070 | 8_1:+73465759 | None:intergenic |
| CCATTGGTCTTCTAACCACT+TGG | 0.476561 | 8_1:+73464533 | None:intergenic |
| CACTGTTAATTTAATGTTGG+AGG | 0.484776 | 8_1:-73462920 | Msa1213320:three_prime_UTR |
| TTGCAGCAATCAATTTGTGC+AGG | 0.486323 | 8_1:+73465848 | None:intergenic |
| GCAAATTCACGACCACCGTC+TGG | 0.486453 | 8_1:-73466043 | Msa1213320:five_prime_UTR |
| CCGCACTGTTAATTTAATGT+TGG | 0.487345 | 8_1:-73462923 | Msa1213320:three_prime_UTR |
| AGAATGACCTGATCGCGAAT+AGG | 0.488034 | 8_1:+73465689 | None:intergenic |
| GACTAATGCTAATTATATGC+TGG | 0.488179 | 8_1:-73464626 | Msa1213320:CDS |
| AAGTAGAATTCAACAGGAAG+TGG | 0.490243 | 8_1:-73464107 | Msa1213320:CDS |
| TGGGCATCGAGATTCATGTT+TGG | 0.492358 | 8_1:+73465790 | None:intergenic |
| AAATTCCACAGCAAACATCT+TGG | 0.499946 | 8_1:+73465897 | None:intergenic |
| TGGGAGAGAAAAGGCAAAGT+AGG | 0.501891 | 8_1:-73463913 | Msa1213320:CDS |
| GTTGGACTGTGGATTGTTGA+CGG | 0.502066 | 8_1:+73464239 | None:intergenic |
| TGCCTGAGGCCCTAAGCTAA+GGG | 0.502109 | 8_1:+73462947 | None:intergenic |
| TTCTAGGTTTACCATCCTCA+TGG | 0.502370 | 8_1:-73464838 | Msa1213320:intron |
| CTACTAGTATGGACCTTACT+GGG | 0.506180 | 8_1:+73463815 | None:intergenic |
| GCAAGCCACCCATACCATCT+TGG | 0.510712 | 8_1:-73463232 | Msa1213320:CDS |
| CTGCTCACCCTATCAAGTAA+AGG | 0.512028 | 8_1:+73464469 | None:intergenic |
| GAGAATCTCTGGCGACAAAG+TGG | 0.512531 | 8_1:+73465770 | None:intergenic |
| TTTCAATAAAGAAAAGAGGT+TGG | 0.515495 | 8_1:-73463648 | Msa1213320:CDS |
| ATATTTAAGATGGTTACATC+AGG | 0.520921 | 8_1:+73464574 | None:intergenic |
| AATTGGAATTCTTTAAGAAG+TGG | 0.523493 | 8_1:-73464379 | Msa1213320:CDS |
| AAGCATTGCCGGCAACAATT+GGG | 0.527114 | 8_1:+73463108 | None:intergenic |
| ATGGCTGCATACTGAGTTCG+AGG | 0.528787 | 8_1:+73463170 | None:intergenic |
| GTTAATTTAATGTTGGAGGT+AGG | 0.529861 | 8_1:-73462916 | Msa1213320:three_prime_UTR |
| AATTCTAGTTCTTTATCAAG+TGG | 0.532006 | 8_1:-73464298 | Msa1213320:CDS |
| CTTTATGTACGCCAAAATGC+AGG | 0.532125 | 8_1:-73463993 | Msa1213320:CDS |
| CAATGAAAGAAATGCCTCAA+AGG | 0.533882 | 8_1:-73463768 | Msa1213320:CDS |
| TGTCGTACAGGAGATGCCAT+TGG | 0.542278 | 8_1:+73464517 | None:intergenic |
| CGATGTTGTCAAGTCGGTGT+TGG | 0.542402 | 8_1:-73463070 | Msa1213320:CDS |
| TTCTCTAGCACCACTGCATG+AGG | 0.543758 | 8_1:+73464075 | None:intergenic |
| GGAACGTCCATTGCCCAGTA+AGG | 0.546548 | 8_1:-73463828 | Msa1213320:CDS |
| ATTAGAATCAACAGGACCAC+TGG | 0.553330 | 8_1:+73464807 | None:intergenic |
| CTCCGATGTTGGGAGAGAAA+AGG | 0.553404 | 8_1:-73463922 | Msa1213320:CDS |
| AAGAAAAGACATCATGCATA+GGG | 0.555505 | 8_1:+73465732 | None:intergenic |
| ATTCAACAGGAAGTGGATGA+TGG | 0.555748 | 8_1:-73464100 | Msa1213320:CDS |
| TAGCGTGTTCACCTCTAAGA+AGG | 0.556066 | 8_1:-73463681 | Msa1213320:CDS |
| GAAGAAAAGACATCATGCAT+AGG | 0.556171 | 8_1:+73465731 | None:intergenic |
| TTGATGCGTTTGTTTGATGT+AGG | 0.559764 | 8_1:+73465962 | None:intergenic |
| TGTGGATTGTTGACGGCTTG+CGG | 0.563674 | 8_1:+73464246 | None:intergenic |
| TTGGCTAAAAGCTTCGGGAA+TGG | 0.564675 | 8_1:-73463629 | Msa1213320:CDS |
| AGAATCTCTGGCGACAAAGT+GGG | 0.566207 | 8_1:+73465771 | None:intergenic |
| TCAAGTAACATGTTGAGTAA+TGG | 0.571263 | 8_1:-73464208 | Msa1213320:CDS |
| GTTCACCTCTAAGAAGGATG+TGG | 0.574677 | 8_1:-73463675 | Msa1213320:CDS |
| GTATGGACCTTACTGGGCAA+TGG | 0.575352 | 8_1:+73463821 | None:intergenic |
| GTAGGTTCAGCACCCTCAAG+TGG | 0.578222 | 8_1:-73463713 | Msa1213320:CDS |
| TGGTCATATTTCCATGAGGA+TGG | 0.580674 | 8_1:+73464827 | None:intergenic |
| CAATTTCTTTACCATTTAGG+CGG | 0.581823 | 8_1:+73462867 | None:intergenic |
| CGCAAGTGTTGTATTTGCGA+TGG | 0.582040 | 8_1:-73464778 | Msa1213320:CDS |
| AGCAAAACATTTCAATCTGG+TGG | 0.582593 | 8_1:-73464340 | Msa1213320:CDS |
| TGCAGCAATCAATTTGTGCA+GGG | 0.587281 | 8_1:+73465849 | None:intergenic |
| GCACGCTGGACTTCCGACAC+AGG | 0.591609 | 8_1:+73464430 | None:intergenic |
| AGTAACATGTTGAGTAATGG+TGG | 0.593885 | 8_1:-73464205 | Msa1213320:CDS |
| GGGAGAGAAAAGGCAAAGTA+GGG | 0.594053 | 8_1:-73463912 | Msa1213320:CDS |
| ATTAACAGTGCGGTTGCCTG+AGG | 0.595060 | 8_1:+73462933 | None:intergenic |
| GGAATGGCAAGCAGCCAAGA+TGG | 0.603129 | 8_1:+73463218 | None:intergenic |
| GCAAGCAGCCAAGATGGTAT+GGG | 0.603934 | 8_1:+73463224 | None:intergenic |
| GAACATTACGCAGGGCACGC+TGG | 0.605204 | 8_1:+73464416 | None:intergenic |
| TTTAATGTTGGAGGTAGGCG+TGG | 0.605272 | 8_1:-73462911 | Msa1213320:three_prime_UTR |
| TTGGGCTACACCGTTCCTGA+AGG | 0.607395 | 8_1:-73464685 | Msa1213320:CDS |
| CGTGAACGATGTTGTCAAGT+CGG | 0.608768 | 8_1:-73463076 | Msa1213320:CDS |
| GCATTTCTTTCATTGTGACA+GGG | 0.609228 | 8_1:+73463776 | None:intergenic |
| AAACCAATCACCTTCAGGAA+CGG | 0.610160 | 8_1:+73464675 | None:intergenic |
| ATAATTAGCATTAGTCTCCA+GGG | 0.614978 | 8_1:+73464633 | None:intergenic |
| GAAATGCCTCAAAGGAACAA+AGG | 0.615422 | 8_1:-73463760 | Msa1213320:CDS |
| CCAAGTGGTTAGAAGACCAA+TGG | 0.619603 | 8_1:-73464533 | Msa1213320:CDS |
| TCTCTAGCACCACTGCATGA+GGG | 0.624636 | 8_1:+73464076 | None:intergenic |
| AGCAGCCAAGATGGTATGGG+TGG | 0.626338 | 8_1:+73463227 | None:intergenic |
| ACCATCTTAAATATTGTGAG+AGG | 0.626569 | 8_1:-73464565 | Msa1213320:CDS |
| AAGACAAATTCGGGACCAGA+CGG | 0.632549 | 8_1:+73466028 | None:intergenic |
| GCAAAGTAGGGTCTTGTGTG+AGG | 0.638155 | 8_1:-73463900 | Msa1213320:CDS |
| TAAAGGAATATCAGAAGACA+AGG | 0.638369 | 8_1:+73464486 | None:intergenic |
| AGCTTGGAAAATGATGCGTA+AGG | 0.638683 | 8_1:-73464161 | Msa1213320:CDS |
| GAAGCAGTTGAACATTACGC+AGG | 0.639695 | 8_1:+73464407 | None:intergenic |
| TACTCATTTAGAAGGATACA+GGG | 0.641504 | 8_1:-73463849 | Msa1213320:CDS |
| AAACCTTCAAGGTAGTTGCA+AGG | 0.642576 | 8_1:-73463254 | Msa1213320:CDS |
| CGAAGGTAAGAAACCTGTGT+CGG | 0.644076 | 8_1:-73464443 | Msa1213320:CDS |
| GATAGGGTGAGCAGATCCGA+AGG | 0.646279 | 8_1:-73464460 | Msa1213320:CDS |
| ACAAAATGTTGAGCTAAAAG+CGG | 0.648538 | 8_1:-73464599 | Msa1213320:CDS |
| GATGATGGTCCCTCATGCAG+TGG | 0.659027 | 8_1:-73464085 | Msa1213320:CDS |
| AAGCAGTTGAACATTACGCA+GGG | 0.660055 | 8_1:+73464408 | None:intergenic |
| GCCTGAGGCCCTAAGCTAAG+GGG | 0.662805 | 8_1:+73462948 | None:intergenic |
| CCTCATGGAAATATGACCAG+TGG | 0.662971 | 8_1:-73464823 | Msa1213320:CDS |
| TGATTGAGCACGTTGGACTG+TGG | 0.664126 | 8_1:+73464228 | None:intergenic |
| TGTTACTTGATTGAGCACGT+TGG | 0.679662 | 8_1:+73464221 | None:intergenic |
| AATAACCAAGATGTTTGCTG+TGG | 0.680160 | 8_1:-73465902 | Msa1213320:CDS |
| TTAGATTCTGGGCAACTACG+AGG | 0.687829 | 8_1:+73464040 | None:intergenic |
| TTTGTTTGATGTAGGCAACG+AGG | 0.700541 | 8_1:+73465970 | None:intergenic |
| ACAAATTCGGGACCAGACGG+TGG | 0.701984 | 8_1:+73466031 | None:intergenic |
| GGAATTTGCTACATCGAACG+CGG | 0.706610 | 8_1:-73465881 | Msa1213320:CDS |
| AGGAATCTTAACATCCCGTG+AGG | 0.714302 | 8_1:+73465709 | None:intergenic |
| GAGAGGAACAGGCAGCCAAG+TGG | 0.718089 | 8_1:-73464548 | Msa1213320:CDS |
| CCAACATTAAATTAACAGTG+CGG | 0.728484 | 8_1:+73462923 | None:intergenic |
| CCACTGGTCATATTTCCATG+AGG | 0.735026 | 8_1:+73464823 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATTAATAATGCACTAAT+TGG | - | chr8_1:73463597-73463616 | Msa1213320:CDS | 15.0% |
| !!! | ATATTTTCAATAAAGAAAAG+AGG | - | chr8_1:73465205-73465224 | Msa1213320:intron | 15.0% |
| !! | AATACTTTCATTCAATTAAA+AGG | + | chr8_1:73465552-73465571 | None:intergenic | 15.0% |
| !!! | TTTTTCACTATCATTAGTTT+AGG | + | chr8_1:73463416-73463435 | None:intergenic | 20.0% |
| !! | AAGAAAAAAATGACAACTAT+CGG | - | chr8_1:73463620-73463639 | Msa1213320:CDS | 20.0% |
| !! | TAGATACATTTGACAATATT+TGG | - | chr8_1:73463721-73463740 | Msa1213320:CDS | 20.0% |
| !! | AGATACATTTGACAATATTT+GGG | - | chr8_1:73463722-73463741 | Msa1213320:CDS | 20.0% |
| !!! | ATAGAAGGAATAAAATTTTG+AGG | - | chr8_1:73463780-73463799 | Msa1213320:CDS | 20.0% |
| !!! | TAGAAGGAATAAAATTTTGA+GGG | - | chr8_1:73463781-73463800 | Msa1213320:CDS | 20.0% |
| !! | ATAGACAACAAAATTATGAA+AGG | + | chr8_1:73463885-73463904 | None:intergenic | 20.0% |
| !! | AAAGATCACATATTAGTATA+AGG | + | chr8_1:73464120-73464139 | None:intergenic | 20.0% |
| !!! | ATGATTTTCCAAATTTTTTG+GGG | + | chr8_1:73464911-73464930 | None:intergenic | 20.0% |
| !!! | GATGATTTTCCAAATTTTTT+GGG | + | chr8_1:73464912-73464931 | None:intergenic | 20.0% |
| !! | CAAAAAATTTGGAAAATCAT+CGG | - | chr8_1:73464911-73464930 | Msa1213320:intron | 20.0% |
| !!! | AATTTAGTTTAACAAGAGAT+TGG | + | chr8_1:73465290-73465309 | None:intergenic | 20.0% |
| !! | TTAGCTATCAATAAACAATT+AGG | - | chr8_1:73465318-73465337 | Msa1213320:intron | 20.0% |
| !! | TTTCAATTTCTTTACCATTT+AGG | + | chr8_1:73465996-73466015 | None:intergenic | 20.0% |
| !! | ATGCAATTTTGAATGTGTAA+CGG | + | chr8_1:73463199-73463218 | None:intergenic | 25.0% |
| ! | AGAAAAAAATGACAACTATC+GGG | - | chr8_1:73463621-73463640 | Msa1213320:CDS | 25.0% |
| ! | ATATTGTCAAATGTATCTAG+TGG | + | chr8_1:73463720-73463739 | None:intergenic | 25.0% |
| ! | GATACATTTGACAATATTTG+GGG | - | chr8_1:73463723-73463742 | Msa1213320:CDS | 25.0% |
| ! | TATATAGTAAAACACTCTTG+AGG | - | chr8_1:73463756-73463775 | Msa1213320:CDS | 25.0% |
| !! | AGAAGGAATAAAATTTTGAG+GGG | - | chr8_1:73463782-73463801 | Msa1213320:CDS | 25.0% |
| ! | GTCTATATATTATTTACTGC+TGG | - | chr8_1:73463899-73463918 | Msa1213320:CDS | 25.0% |
| ! | TAATGTTATAAGTAACCAAC+AGG | - | chr8_1:73463965-73463984 | Msa1213320:CDS | 25.0% |
| !! | TAAAAAAATCATTAGCCTGT+TGG | + | chr8_1:73463983-73464002 | None:intergenic | 25.0% |
| !! | ATATTTAAGATGGTTACATC+AGG | + | chr8_1:73464286-73464305 | None:intergenic | 25.0% |
| ! | TGATATTCCTTTACTTGATA+GGG | - | chr8_1:73464381-73464400 | Msa1213320:CDS | 25.0% |
| !! | AATTGGAATTCTTTAAGAAG+TGG | - | chr8_1:73464478-73464497 | Msa1213320:CDS | 25.0% |
| !! | CTTTAAGAAGTGGTAAATTA+AGG | - | chr8_1:73464488-73464507 | Msa1213320:CDS | 25.0% |
| !!! | AATTCTAGTTCTTTATCAAG+TGG | - | chr8_1:73464559-73464578 | Msa1213320:CDS | 25.0% |
| ! | ATTAGATGATTCACATTCAA+TGG | - | chr8_1:73464585-73464604 | Msa1213320:CDS | 25.0% |
| !!! | GTTGTTGTTTTTTAGATTCT+GGG | + | chr8_1:73464831-73464850 | None:intergenic | 25.0% |
| ! | TACATAAAGTCTAATGTTCT+GGG | + | chr8_1:73464853-73464872 | None:intergenic | 25.0% |
| !!! | TGATTTTCCAAATTTTTTGG+GGG | + | chr8_1:73464910-73464929 | None:intergenic | 25.0% |
| !! | CGATGATTTTCCAAATTTTT+TGG | + | chr8_1:73464913-73464932 | None:intergenic | 25.0% |
| ! | AACCATAATACTCATTTAGA+AGG | - | chr8_1:73465000-73465019 | Msa1213320:intron | 25.0% |
| ! | ATCCTTCTAAATGAGTATTA+TGG | + | chr8_1:73465005-73465024 | None:intergenic | 25.0% |
| ! | TTTCAATAAAGAAAAGAGGT+TGG | - | chr8_1:73465209-73465228 | Msa1213320:intron | 25.0% |
| ! | AATGATCATGTAAATATGGA+GGG | + | chr8_1:73465375-73465394 | None:intergenic | 25.0% |
| ! | CAACAATGATCATGTAAATA+TGG | + | chr8_1:73465379-73465398 | None:intergenic | 25.0% |
| ! | CATATTTACATGATCATTGT+TGG | - | chr8_1:73465377-73465396 | Msa1213320:intron | 25.0% |
| ! | GAAAACAATAATCACTGAAA+TGG | + | chr8_1:73465861-73465880 | None:intergenic | 25.0% |
| ! | TTCTTCTTCAGTTTTCACTT+CGG | + | chr8_1:73462923-73462942 | None:intergenic | 30.0% |
| TGCAAACGAAGCAAAAATAA+TGG | + | chr8_1:73463035-73463054 | None:intergenic | 30.0% | |
| AAGAAAAGACATCATGCATA+GGG | + | chr8_1:73463128-73463147 | None:intergenic | 30.0% | |
| TGTCAACAATTCATGTGTTA+GGG | - | chr8_1:73463297-73463316 | Msa1213320:intron | 30.0% | |
| TTAGTTTAGGAATTCACTAG+CGG | + | chr8_1:73463403-73463422 | None:intergenic | 30.0% | |
| ATCTTGACTGAAATTGTAGA+GGG | - | chr8_1:73463443-73463462 | Msa1213320:intron | 30.0% | |
| TGAAGAACAAAGTCAAATCT+TGG | - | chr8_1:73463505-73463524 | Msa1213320:intron | 30.0% | |
| CAATTCCTCTCAAAAACTAT+CGG | - | chr8_1:73463646-73463665 | Msa1213320:CDS | 30.0% | |
| AATTCCTCTCAAAAACTATC+GGG | - | chr8_1:73463647-73463666 | Msa1213320:CDS | 30.0% | |
| ! | GTCTAAAATCTAAACATTCG+CGG | + | chr8_1:73463839-73463858 | None:intergenic | 30.0% |
| ! | ATAATTAGCATTAGTCTCCA+GGG | + | chr8_1:73464227-73464246 | None:intergenic | 30.0% |
| ! | TATAATTAGCATTAGTCTCC+AGG | + | chr8_1:73464228-73464247 | None:intergenic | 30.0% |
| GACTAATGCTAATTATATGC+TGG | - | chr8_1:73464231-73464250 | Msa1213320:CDS | 30.0% | |
| !!! | CTTTTAGCTCAACATTTTGT+TGG | + | chr8_1:73464258-73464277 | None:intergenic | 30.0% |
| ACAAAATGTTGAGCTAAAAG+CGG | - | chr8_1:73464258-73464277 | Msa1213320:CDS | 30.0% | |
| ACCATCTTAAATATTGTGAG+AGG | - | chr8_1:73464292-73464311 | Msa1213320:CDS | 30.0% | |
| TCCTCTCACAATATTTAAGA+TGG | + | chr8_1:73464296-73464315 | None:intergenic | 30.0% | |
| TTAAATATTGTGAGAGGAAC+AGG | - | chr8_1:73464298-73464317 | Msa1213320:CDS | 30.0% | |
| TAAAGGAATATCAGAAGACA+AGG | + | chr8_1:73464374-73464393 | None:intergenic | 30.0% | |
| CTGATATTCCTTTACTTGAT+AGG | - | chr8_1:73464380-73464399 | Msa1213320:CDS | 30.0% | |
| ! | CAGATTGAAATGTTTTGCTA+TGG | + | chr8_1:73464516-73464535 | None:intergenic | 30.0% |
| CATAGCAAAACATTTCAATC+TGG | - | chr8_1:73464514-73464533 | Msa1213320:CDS | 30.0% | |
| TCAAGTAACATGTTGAGTAA+TGG | - | chr8_1:73464649-73464668 | Msa1213320:CDS | 30.0% | |
| TGAATTCTACTTGTTCTTCT+AGG | + | chr8_1:73464742-73464761 | None:intergenic | 30.0% | |
| AAGAACAAGTAGAATTCAAC+AGG | - | chr8_1:73464744-73464763 | Msa1213320:CDS | 30.0% | |
| !!! | GGTTGTTGTTTTTTAGATTC+TGG | + | chr8_1:73464832-73464851 | None:intergenic | 30.0% |
| GTACATAAAGTCTAATGTTC+TGG | + | chr8_1:73464854-73464873 | None:intergenic | 30.0% | |
| ATACTCATTTAGAAGGATAC+AGG | - | chr8_1:73465007-73465026 | Msa1213320:intron | 30.0% | |
| TACTCATTTAGAAGGATACA+GGG | - | chr8_1:73465008-73465027 | Msa1213320:intron | 30.0% | |
| ATGATCATGTAAATATGGAG+GGG | + | chr8_1:73465374-73465393 | None:intergenic | 30.0% | |
| CAATGATCATGTAAATATGG+AGG | + | chr8_1:73465376-73465395 | None:intergenic | 30.0% | |
| !! | AAATGGATTGTAAAAGTGTG+TGG | + | chr8_1:73465427-73465446 | None:intergenic | 30.0% |
| ! | ACACTTTTACAATCCATTTG+TGG | - | chr8_1:73465428-73465447 | Msa1213320:intron | 30.0% |
| ! | TATATTAGACTTTTGCTGCT+CGG | + | chr8_1:73465663-73465682 | None:intergenic | 30.0% |
| !! | ACTTCTGAAACTGAAGATTA+TGG | + | chr8_1:73465718-73465737 | None:intergenic | 30.0% |
| GCAACTGTGTAAATAAATTC+AGG | - | chr8_1:73465883-73465902 | Msa1213320:CDS | 30.0% | |
| CCAACATTAAATTAACAGTG+CGG | + | chr8_1:73465937-73465956 | None:intergenic | 30.0% | |
| CACTGTTAATTTAATGTTGG+AGG | - | chr8_1:73465937-73465956 | Msa1213320:CDS | 30.0% | |
| GTTAATTTAATGTTGGAGGT+AGG | - | chr8_1:73465941-73465960 | Msa1213320:CDS | 30.0% | |
| CAATTTCTTTACCATTTAGG+CGG | + | chr8_1:73465993-73466012 | None:intergenic | 30.0% | |
| TTCTGCTCAGAAGACAAATT+CGG | + | chr8_1:73462842-73462861 | None:intergenic | 35.0% | |
| TTGATGCGTTTGTTTGATGT+AGG | + | chr8_1:73462898-73462917 | None:intergenic | 35.0% | |
| ! | AATAACCAAGATGTTTGCTG+TGG | - | chr8_1:73462955-73462974 | Msa1213320:three_prime_UTR | 35.0% |
| AAATTCCACAGCAAACATCT+TGG | + | chr8_1:73462963-73462982 | None:intergenic | 35.0% | |
| ! | TTTTTGCTTCGTTTGCATCA+TGG | - | chr8_1:73463038-73463057 | Msa1213320:exon | 35.0% |
| GAAGAAAAGACATCATGCAT+AGG | + | chr8_1:73463129-73463148 | None:intergenic | 35.0% | |
| ! | ATGATGTCTTTTCTTCCTCA+CGG | - | chr8_1:73463133-73463152 | Msa1213320:CDS | 35.0% |
| TCAAAATTGCATGAAACCCT+AGG | - | chr8_1:73463207-73463226 | Msa1213320:CDS | 35.0% | |
| AATGAAGTCTAGCTAACCTA+GGG | + | chr8_1:73463226-73463245 | None:intergenic | 35.0% | |
| TAATGAAGTCTAGCTAACCT+AGG | + | chr8_1:73463227-73463246 | None:intergenic | 35.0% | |
| CATGAATTGTTGACAGCTAT+GGG | + | chr8_1:73463292-73463311 | None:intergenic | 35.0% | |
| ACATGAATTGTTGACAGCTA+TGG | + | chr8_1:73463293-73463312 | None:intergenic | 35.0% | |
| CTGTCAACAATTCATGTGTT+AGG | - | chr8_1:73463296-73463315 | Msa1213320:intron | 35.0% | |
| TAGTTTAGGAATTCACTAGC+GGG | + | chr8_1:73463402-73463421 | None:intergenic | 35.0% | |
| GATCTTGACTGAAATTGTAG+AGG | - | chr8_1:73463442-73463461 | Msa1213320:intron | 35.0% | |
| TCTTGACTGAAATTGTAGAG+GGG | - | chr8_1:73463444-73463463 | Msa1213320:intron | 35.0% | |
| ! | AAAGTCAAATCTTGGTGTAG+TGG | - | chr8_1:73463513-73463532 | Msa1213320:intron | 35.0% |
| TTGTCAAATGTATCTAGTGG+CGG | + | chr8_1:73463717-73463736 | None:intergenic | 35.0% | |
| AAACACTCTTGAGGAATAGA+AGG | - | chr8_1:73463765-73463784 | Msa1213320:CDS | 35.0% | |
| !! | TAAAATTTTGAGGGGAGACA+TGG | - | chr8_1:73463790-73463809 | Msa1213320:CDS | 35.0% |
| ! | GTTTCACATACGTTTTGTGT+TGG | - | chr8_1:73464148-73464167 | Msa1213320:CDS | 35.0% |
| ! | ACATACGTTTTGTGTTGGAT+TGG | - | chr8_1:73464153-73464172 | Msa1213320:CDS | 35.0% |
| ! | CATACGTTTTGTGTTGGATT+GGG | - | chr8_1:73464154-73464173 | Msa1213320:CDS | 35.0% |
| !! | AAGGAATTGTTTTGTCGTAC+AGG | + | chr8_1:73464355-73464374 | None:intergenic | 35.0% |
| TTCAACTGCTTCGTGAAAAT+TGG | - | chr8_1:73464461-73464480 | Msa1213320:CDS | 35.0% | |
| AGCAAAACATTTCAATCTGG+TGG | - | chr8_1:73464517-73464536 | Msa1213320:CDS | 35.0% | |
| AGTAACATGTTGAGTAATGG+TGG | - | chr8_1:73464652-73464671 | Msa1213320:CDS | 35.0% | |
| AAGTAGAATTCAACAGGAAG+TGG | - | chr8_1:73464750-73464769 | Msa1213320:CDS | 35.0% | |
| GCATTTCTTTCATTGTGACA+GGG | + | chr8_1:73465084-73465103 | None:intergenic | 35.0% | |
| CAATGAAAGAAATGCCTCAA+AGG | - | chr8_1:73465089-73465108 | Msa1213320:intron | 35.0% | |
| ! | CTACTAGATTTTCCACTTGA+GGG | + | chr8_1:73465159-73465178 | None:intergenic | 35.0% |
| AATATCCACATCCTTCTTAG+AGG | + | chr8_1:73465190-73465209 | None:intergenic | 35.0% | |
| TGATCATGTAAATATGGAGG+GGG | + | chr8_1:73465373-73465392 | None:intergenic | 35.0% | |
| GTTTATCTAGTGACCACAAA+TGG | + | chr8_1:73465444-73465463 | None:intergenic | 35.0% | |
| GGTCACTAGATAAACTCATT+TGG | - | chr8_1:73465449-73465468 | Msa1213320:intron | 35.0% | |
| ATGAGTATTCAGCAGTAACA+TGG | + | chr8_1:73465500-73465519 | None:intergenic | 35.0% | |
| GTCATATGCATGCTAATGAA+TGG | + | chr8_1:73465527-73465546 | None:intergenic | 35.0% | |
| ACTGAAGATTATGGTCAGTA+TGG | + | chr8_1:73465709-73465728 | None:intergenic | 35.0% | |
| ATTTAATGCCCAATTGTTGC+CGG | - | chr8_1:73465741-73465760 | Msa1213320:CDS | 35.0% | |
| CCGCACTGTTAATTTAATGT+TGG | - | chr8_1:73465934-73465953 | Msa1213320:CDS | 35.0% | |
| !! | AGTTTACTTTTCCGCCTAAA+TGG | - | chr8_1:73465979-73465998 | Msa1213320:CDS | 35.0% |
| TCTGCTCAGAAGACAAATTC+GGG | + | chr8_1:73462841-73462860 | None:intergenic | 40.0% | |
| TTTGTTTGATGTAGGCAACG+AGG | + | chr8_1:73462890-73462909 | None:intergenic | 40.0% | |
| TGCAGCAATCAATTTGTGCA+GGG | + | chr8_1:73463011-73463030 | None:intergenic | 40.0% | |
| TTGCAGCAATCAATTTGTGC+AGG | + | chr8_1:73463012-73463031 | None:intergenic | 40.0% | |
| CTTCGTTTGCATCATGGAAT+GGG | - | chr8_1:73463044-73463063 | Msa1213320:exon | 40.0% | |
| TACGAACGTTTGAGAATCTC+TGG | + | chr8_1:73463101-73463120 | None:intergenic | 40.0% | |
| ! | TGATGTCTTTTCTTCCTCAC+GGG | - | chr8_1:73463134-73463153 | Msa1213320:CDS | 40.0% |
| TAAGATTCCTATTCGCGATC+AGG | - | chr8_1:73463161-73463180 | Msa1213320:CDS | 40.0% | |
| GCTAGACTTCATTAAGACCT+AGG | - | chr8_1:73463233-73463252 | Msa1213320:CDS | 40.0% | |
| ! | ATAAAAAAGAGCGCACTCCT+AGG | + | chr8_1:73463253-73463272 | None:intergenic | 40.0% |
| !!! | TGCGCTCTTTTTTATGTCTC+AGG | - | chr8_1:73463258-73463277 | Msa1213320:CDS | 40.0% |
| !!! | GCGCTCTTTTTTATGTCTCA+GGG | - | chr8_1:73463259-73463278 | Msa1213320:CDS | 40.0% |
| CAACAATTCATGTGTTAGGG+CGG | - | chr8_1:73463300-73463319 | Msa1213320:intron | 40.0% | |
| ATTGAAGGCAAAGCTGTGTA+TGG | + | chr8_1:73463327-73463346 | None:intergenic | 40.0% | |
| TACACAGCTTTGCCTTCAAT+TGG | - | chr8_1:73463327-73463346 | Msa1213320:intron | 40.0% | |
| ACACAGCTTTGCCTTCAATT+GGG | - | chr8_1:73463328-73463347 | Msa1213320:intron | 40.0% | |
| AGTTTAGGAATTCACTAGCG+GGG | + | chr8_1:73463401-73463420 | None:intergenic | 40.0% | |
| TACTGCTGGTGATCAATGAA+CGG | - | chr8_1:73463913-73463932 | Msa1213320:CDS | 40.0% | |
| TTCTAGGTTTACCATCCTCA+TGG | - | chr8_1:73464019-73464038 | Msa1213320:CDS | 40.0% | |
| TGGTCATATTTCCATGAGGA+TGG | + | chr8_1:73464033-73464052 | None:intergenic | 40.0% | |
| ATTAGAATCAACAGGACCAC+TGG | + | chr8_1:73464053-73464072 | None:intergenic | 40.0% | |
| CGTTCAGCATTAGAATCAAC+AGG | + | chr8_1:73464061-73464080 | None:intergenic | 40.0% | |
| AAACCAATCACCTTCAGGAA+CGG | + | chr8_1:73464185-73464204 | None:intergenic | 40.0% | |
| TGACAAAACCAATCACCTTC+AGG | + | chr8_1:73464190-73464209 | None:intergenic | 40.0% | |
| AAGCAGTTGAACATTACGCA+GGG | + | chr8_1:73464452-73464471 | None:intergenic | 40.0% | |
| ! | TGTTACTTGATTGAGCACGT+TGG | + | chr8_1:73464639-73464658 | None:intergenic | 40.0% |
| AAGATGACGTTGACAAAGCT+TGG | - | chr8_1:73464680-73464699 | Msa1213320:CDS | 40.0% | |
| AGCTTGGAAAATGATGCGTA+AGG | - | chr8_1:73464696-73464715 | Msa1213320:CDS | 40.0% | |
| ATTCAACAGGAAGTGGATGA+TGG | - | chr8_1:73464757-73464776 | Msa1213320:CDS | 40.0% | |
| CTTTATGTACGCCAAAATGC+AGG | - | chr8_1:73464864-73464883 | Msa1213320:intron | 40.0% | |
| CTCTTGTCCCCCAAAAAATT+TGG | - | chr8_1:73464900-73464919 | Msa1213320:intron | 40.0% | |
| CTACTAGTATGGACCTTACT+GGG | + | chr8_1:73465045-73465064 | None:intergenic | 40.0% | |
| ACTACTAGTATGGACCTTAC+TGG | + | chr8_1:73465046-73465065 | None:intergenic | 40.0% | |
| GGCATTTCTTTCATTGTGAC+AGG | + | chr8_1:73465085-73465104 | None:intergenic | 40.0% | |
| GAAATGCCTCAAAGGAACAA+AGG | - | chr8_1:73465097-73465116 | Msa1213320:intron | 40.0% | |
| ! | GCTTACTTGGTAACTTCAGT+AGG | - | chr8_1:73465126-73465145 | Msa1213320:intron | 40.0% |
| ! | GCTACTAGATTTTCCACTTG+AGG | + | chr8_1:73465160-73465179 | None:intergenic | 40.0% |
| ! | AAGAGGTTGGCTAAAAGCTT+CGG | - | chr8_1:73465222-73465241 | Msa1213320:intron | 40.0% |
| AAACCTTCAAGGTAGTTGCA+AGG | - | chr8_1:73465603-73465622 | Msa1213320:intron | 40.0% | |
| !! | AAGTCGGTGTTGGAAAAAGT+GGG | - | chr8_1:73465797-73465816 | Msa1213320:CDS | 40.0% |
| AAGACAAATTCGGGACCAGA+CGG | + | chr8_1:73462832-73462851 | None:intergenic | 45.0% | |
| !! | GGAATTTGCTACATCGAACG+CGG | - | chr8_1:73462976-73462995 | Msa1213320:three_prime_UTR | 45.0% |
| GCTTCGTTTGCATCATGGAA+TGG | - | chr8_1:73463043-73463062 | Msa1213320:exon | 45.0% | |
| !! | TGGGCATCGAGATTCATGTT+TGG | + | chr8_1:73463070-73463089 | None:intergenic | 45.0% |
| AGAATCTCTGGCGACAAAGT+GGG | + | chr8_1:73463089-73463108 | None:intergenic | 45.0% | |
| AGGAATCTTAACATCCCGTG+AGG | + | chr8_1:73463151-73463170 | None:intergenic | 45.0% | |
| AGAATGACCTGATCGCGAAT+AGG | + | chr8_1:73463171-73463190 | None:intergenic | 45.0% | |
| TTCATTTAACCTCACGTGCG+TGG | - | chr8_1:73463543-73463562 | Msa1213320:CDS | 45.0% | |
| !! | CGATCCCGATAGTTTTTGAG+AGG | + | chr8_1:73463654-73463673 | None:intergenic | 45.0% |
| ! | GAGTCTGTTTAGCGAGTTGA+TGG | + | chr8_1:73463686-73463705 | None:intergenic | 45.0% |
| ! | AAATGTATCTAGTGGCGGAG+TGG | + | chr8_1:73463712-73463731 | None:intergenic | 45.0% |
| CCACTGGTCATATTTCCATG+AGG | + | chr8_1:73464037-73464056 | None:intergenic | 45.0% | |
| CCTCATGGAAATATGACCAG+TGG | - | chr8_1:73464034-73464053 | Msa1213320:CDS | 45.0% | |
| ! | CGCAAGTGTTGTATTTGCGA+TGG | - | chr8_1:73464079-73464098 | Msa1213320:CDS | 45.0% |
| !! | TCATGATTGTGCTGTTTCCC+TGG | - | chr8_1:73464207-73464226 | Msa1213320:CDS | 45.0% |
| !! | CCATTGGTCTTCTAACCACT+TGG | + | chr8_1:73464327-73464346 | None:intergenic | 45.0% |
| CCAAGTGGTTAGAAGACCAA+TGG | - | chr8_1:73464324-73464343 | Msa1213320:CDS | 45.0% | |
| CTGCTCACCCTATCAAGTAA+AGG | + | chr8_1:73464391-73464410 | None:intergenic | 45.0% | |
| CGACACAGGTTTCTTACCTT+CGG | + | chr8_1:73464416-73464435 | None:intergenic | 45.0% | |
| CGAAGGTAAGAAACCTGTGT+CGG | - | chr8_1:73464414-73464433 | Msa1213320:CDS | 45.0% | |
| GAAGCAGTTGAACATTACGC+AGG | + | chr8_1:73464453-73464472 | None:intergenic | 45.0% | |
| ! | GTTGGACTGTGGATTGTTGA+CGG | + | chr8_1:73464621-73464640 | None:intergenic | 45.0% |
| TTAGATTCTGGGCAACTACG+AGG | + | chr8_1:73464820-73464839 | None:intergenic | 45.0% | |
| ! | GTCACACTTCTCCTGCATTT+TGG | + | chr8_1:73464878-73464897 | None:intergenic | 45.0% |
| AAATCATCGGTCTCCGATGT+TGG | - | chr8_1:73464924-73464943 | Msa1213320:intron | 45.0% | |
| AATCATCGGTCTCCGATGTT+GGG | - | chr8_1:73464925-73464944 | Msa1213320:intron | 45.0% | |
| ! | TGCCTTTTCTCTCCCAACAT+CGG | + | chr8_1:73464940-73464959 | None:intergenic | 45.0% |
| TGGGAGAGAAAAGGCAAAGT+AGG | - | chr8_1:73464944-73464963 | Msa1213320:intron | 45.0% | |
| GGGAGAGAAAAGGCAAAGTA+GGG | - | chr8_1:73464945-73464964 | Msa1213320:intron | 45.0% | |
| TGTGGGCACTACTACTAGTA+TGG | + | chr8_1:73465056-73465075 | None:intergenic | 45.0% | |
| ! | ATTGTGACAGGGAGCTTTGT+GGG | + | chr8_1:73465073-73465092 | None:intergenic | 45.0% |
| AGACTGCCTTTGTTCCTTTG+AGG | + | chr8_1:73465106-73465125 | None:intergenic | 45.0% | |
| ACAAAGGCAGTCTGCTTACT+TGG | - | chr8_1:73465113-73465132 | Msa1213320:intron | 45.0% | |
| ! | TAGCGTGTTCACCTCTAAGA+AGG | - | chr8_1:73465176-73465195 | Msa1213320:intron | 45.0% |
| ! | GTTCACCTCTAAGAAGGATG+TGG | - | chr8_1:73465182-73465201 | Msa1213320:intron | 45.0% |
| ! | AGAGGTTGGCTAAAAGCTTC+GGG | - | chr8_1:73465223-73465242 | Msa1213320:intron | 45.0% |
| TTGGCTAAAAGCTTCGGGAA+TGG | - | chr8_1:73465228-73465247 | Msa1213320:intron | 45.0% | |
| TTGCCTTGCAACTACCTTGA+AGG | + | chr8_1:73465609-73465628 | None:intergenic | 45.0% | |
| ! | TAGACTTTTGCTGCTCGGAA+TGG | + | chr8_1:73465658-73465677 | None:intergenic | 45.0% |
| ! | AAGCATTGCCGGCAACAATT+GGG | + | chr8_1:73465752-73465771 | None:intergenic | 45.0% |
| !! | AAAGCATTGCCGGCAACAAT+TGG | + | chr8_1:73465753-73465772 | None:intergenic | 45.0% |
| !! | CGAAGACATGAAAGCATTGC+CGG | + | chr8_1:73465763-73465782 | None:intergenic | 45.0% |
| CGTGAACGATGTTGTCAAGT+CGG | - | chr8_1:73465781-73465800 | Msa1213320:CDS | 45.0% | |
| !! | CAAGTCGGTGTTGGAAAAAG+TGG | - | chr8_1:73465796-73465815 | Msa1213320:CDS | 45.0% |
| TTTAATGTTGGAGGTAGGCG+TGG | - | chr8_1:73465946-73465965 | Msa1213320:CDS | 45.0% | |
| !! | TAATACTTATTATAAATATA+TGG | + | chr8_1:73463472-73463491 | None:intergenic | 5.0% |
| !!! | TTTTATTTTTTATATTTTCT+AGG | - | chr8_1:73464003-73464022 | Msa1213320:CDS | 5.0% |
| GAGAATCTCTGGCGACAAAG+TGG | + | chr8_1:73463090-73463109 | None:intergenic | 50.0% | |
| CCACTAACGGTCCCAATTGA+AGG | + | chr8_1:73463342-73463361 | None:intergenic | 50.0% | |
| CCTTCAATTGGGACCGTTAG+TGG | - | chr8_1:73463339-73463358 | Msa1213320:intron | 50.0% | |
| CAATTGGGACCGTTAGTGGA+CGG | - | chr8_1:73463343-73463362 | Msa1213320:intron | 50.0% | |
| ACATTCAAACCACGCACGTG+AGG | + | chr8_1:73463555-73463574 | None:intergenic | 50.0% | |
| ACACCGTTCCTGAAGGTGAT+TGG | - | chr8_1:73464179-73464198 | Msa1213320:CDS | 50.0% | |
| TGTCGTACAGGAGATGCCAT+TGG | + | chr8_1:73464343-73464362 | None:intergenic | 50.0% | |
| ! | TGTGGATTGTTGACGGCTTG+CGG | + | chr8_1:73464614-73464633 | None:intergenic | 50.0% |
| TGATTGAGCACGTTGGACTG+TGG | + | chr8_1:73464632-73464651 | None:intergenic | 50.0% | |
| TCTCTAGCACCACTGCATGA+GGG | + | chr8_1:73464784-73464803 | None:intergenic | 50.0% | |
| TTCTCTAGCACCACTGCATG+AGG | + | chr8_1:73464785-73464804 | None:intergenic | 50.0% | |
| CTCCGATGTTGGGAGAGAAA+AGG | - | chr8_1:73464935-73464954 | Msa1213320:intron | 50.0% | |
| ! | GCAAAGTAGGGTCTTGTGTG+AGG | - | chr8_1:73464957-73464976 | Msa1213320:intron | 50.0% |
| GTATGGACCTTACTGGGCAA+TGG | + | chr8_1:73465039-73465058 | None:intergenic | 50.0% | |
| CATTGTGACAGGGAGCTTTG+TGG | + | chr8_1:73465074-73465093 | None:intergenic | 50.0% | |
| CATGCAGTTGTTTGTCACGC+AGG | - | chr8_1:73465575-73465594 | Msa1213320:intron | 50.0% | |
| GCAAGCAGCCAAGATGGTAT+GGG | + | chr8_1:73465636-73465655 | None:intergenic | 50.0% | |
| ATGGCTGCATACTGAGTTCG+AGG | + | chr8_1:73465690-73465709 | None:intergenic | 50.0% | |
| CGATGTTGTCAAGTCGGTGT+TGG | - | chr8_1:73465787-73465806 | Msa1213320:CDS | 50.0% | |
| !! | TTCAGGTTGCCCCTTAGCTT+AGG | - | chr8_1:73465900-73465919 | Msa1213320:CDS | 50.0% |
| ! | TCAGGTTGCCCCTTAGCTTA+GGG | - | chr8_1:73465901-73465920 | Msa1213320:CDS | 50.0% |
| ATTAACAGTGCGGTTGCCTG+AGG | + | chr8_1:73465927-73465946 | None:intergenic | 50.0% | |
| GCAAATTCACGACCACCGTC+TGG | - | chr8_1:73462814-73462833 | Msa1213320:three_prime_UTR | 55.0% | |
| ACAAATTCGGGACCAGACGG+TGG | + | chr8_1:73462829-73462848 | None:intergenic | 55.0% | |
| CCAATCCCACCGTCCACTAA+CGG | + | chr8_1:73463355-73463374 | None:intergenic | 55.0% | |
| !! | GGATTGGTCCCCGGATTAGT+TGG | - | chr8_1:73463368-73463387 | Msa1213320:intron | 55.0% |
| GCACAGGACCAACTAATCCG+GGG | + | chr8_1:73463379-73463398 | None:intergenic | 55.0% | |
| GGCACAGGACCAACTAATCC+GGG | + | chr8_1:73463380-73463399 | None:intergenic | 55.0% | |
| GGGCACAGGACCAACTAATC+CGG | + | chr8_1:73463381-73463400 | None:intergenic | 55.0% | |
| TTGGGCTACACCGTTCCTGA+AGG | - | chr8_1:73464172-73464191 | Msa1213320:CDS | 55.0% | |
| GATAGGGTGAGCAGATCCGA+AGG | - | chr8_1:73464397-73464416 | Msa1213320:CDS | 55.0% | |
| ! | GATGATGGTCCCTCATGCAG+TGG | - | chr8_1:73464772-73464791 | Msa1213320:CDS | 55.0% |
| GGAACGTCCATTGCCCAGTA+AGG | - | chr8_1:73465029-73465048 | Msa1213320:intron | 55.0% | |
| GTAGGTTCAGCACCCTCAAG+TGG | - | chr8_1:73465144-73465163 | Msa1213320:intron | 55.0% | |
| !! | CGCAGGTGTCGAAACCTTCA+AGG | - | chr8_1:73465592-73465611 | Msa1213320:intron | 55.0% |
| GCAAGCCACCCATACCATCT+TGG | - | chr8_1:73465625-73465644 | Msa1213320:intron | 55.0% | |
| AGCAGCCAAGATGGTATGGG+TGG | + | chr8_1:73465633-73465652 | None:intergenic | 55.0% | |
| GGCAAGCAGCCAAGATGGTA+TGG | + | chr8_1:73465637-73465656 | None:intergenic | 55.0% | |
| GGAATGGCAAGCAGCCAAGA+TGG | + | chr8_1:73465642-73465661 | None:intergenic | 55.0% | |
| TGCCTGAGGCCCTAAGCTAA+GGG | + | chr8_1:73465913-73465932 | None:intergenic | 55.0% | |
| TTGCCTGAGGCCCTAAGCTA+AGG | + | chr8_1:73465914-73465933 | None:intergenic | 55.0% | |
| ! | TTGGGACCGTTAGTGGACGG+TGG | - | chr8_1:73463346-73463365 | Msa1213320:intron | 60.0% |
| ! | TGGGACCGTTAGTGGACGGT+GGG | - | chr8_1:73463347-73463366 | Msa1213320:intron | 60.0% |
| ! | CCGTTAGTGGACGGTGGGAT+TGG | - | chr8_1:73463352-73463371 | Msa1213320:intron | 60.0% |
| GGAATTCACTAGCGGGGCAC+AGG | + | chr8_1:73463395-73463414 | None:intergenic | 60.0% | |
| GCACATCCCTGCTCGAGAGA+AGG | - | chr8_1:73463812-73463831 | Msa1213320:CDS | 60.0% | |
| GAGAGGAACAGGCAGCCAAG+TGG | - | chr8_1:73464309-73464328 | Msa1213320:CDS | 60.0% | |
| GAACATTACGCAGGGCACGC+TGG | + | chr8_1:73464444-73464463 | None:intergenic | 60.0% | |
| GCCTGAGGCCCTAAGCTAAG+GGG | + | chr8_1:73465912-73465931 | None:intergenic | 60.0% | |
| !! | TGGACGGTGGGATTGGTCCC+CGG | - | chr8_1:73463359-73463378 | Msa1213320:intron | 65.0% |
| CGCGGACCTTCTCTCGAGCA+GGG | + | chr8_1:73463821-73463840 | None:intergenic | 65.0% | |
| TCGCGGACCTTCTCTCGAGC+AGG | + | chr8_1:73463822-73463841 | None:intergenic | 65.0% | |
| GCACGCTGGACTTCCGACAC+AGG | + | chr8_1:73464430-73464449 | None:intergenic | 65.0% | |
| GCCCCTTAGCTTAGGGCCTC+AGG | - | chr8_1:73465908-73465927 | Msa1213320:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 73462805 | 73466074 | 73462805 | ID=Msa1213320;Name=Msa1213320 |
| chr8_1 | mRNA | 73462805 | 73466074 | 73462805 | ID=Msa1213320-mRNA-1;Parent=Msa1213320;Name=Msa1213320-mRNA-1;_AED=0.00;_eAED=0.00;_QI=75|1|1|1|1|1|3|245|616 |
| chr8_1 | exon | 73462805 | 73463282 | 73462805 | ID=Msa1213320-mRNA-1:exon:24947;Parent=Msa1213320-mRNA-1 |
| chr8_1 | exon | 73463540 | 73464854 | 73463540 | ID=Msa1213320-mRNA-1:exon:24946;Parent=Msa1213320-mRNA-1 |
| chr8_1 | exon | 73465697 | 73466074 | 73465697 | ID=Msa1213320-mRNA-1:exon:24945;Parent=Msa1213320-mRNA-1 |
| chr8_1 | five_prime_UTR | 73466000 | 73466074 | 73466000 | ID=Msa1213320-mRNA-1:five_prime_utr;Parent=Msa1213320-mRNA-1 |
| chr8_1 | CDS | 73465697 | 73465999 | 73465697 | ID=Msa1213320-mRNA-1:cds;Parent=Msa1213320-mRNA-1 |
| chr8_1 | CDS | 73463540 | 73464854 | 73463540 | ID=Msa1213320-mRNA-1:cds;Parent=Msa1213320-mRNA-1 |
| chr8_1 | CDS | 73463050 | 73463282 | 73463050 | ID=Msa1213320-mRNA-1:cds;Parent=Msa1213320-mRNA-1 |
| chr8_1 | three_prime_UTR | 73462805 | 73463049 | 73462805 | ID=Msa1213320-mRNA-1:three_prime_utr;Parent=Msa1213320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
