Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1300270 | A0A072UQF4 | 94.337 | 618 | 29 | 4 | 1 | 616 | 1 | 614 | 0.0 | 1179 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1300270 | TR | PHD |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1213320 | Msa1300270 | 0.860582 | 1.868285e-63 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1300270 | MtrunA17_Chr4g0061801 | 94.337 | 618 | 29 | 4 | 1 | 616 | 1 | 614 | 0.0 | 1179 |
| Msa1300270 | MtrunA17_Chr7g0271951 | 42.405 | 158 | 85 | 4 | 32 | 187 | 426 | 579 | 4.16e-34 | 139 |
| Msa1300270 | MtrunA17_Chr7g0271951 | 43.000 | 100 | 54 | 2 | 514 | 611 | 794 | 892 | 1.32e-13 | 74.3 |
| Msa1300270 | MtrunA17_Chr8g0388341 | 34.426 | 183 | 86 | 10 | 32 | 189 | 34 | 207 | 7.21e-18 | 88.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1300270 | AT3G05670.3 | 33.091 | 275 | 169 | 8 | 32 | 297 | 413 | 681 | 4.39e-36 | 145 |
| Msa1300270 | AT3G05670.1 | 33.091 | 275 | 169 | 8 | 32 | 297 | 413 | 681 | 4.39e-36 | 145 |
| Msa1300270 | AT3G05670.2 | 33.091 | 275 | 169 | 8 | 32 | 297 | 413 | 681 | 4.39e-36 | 145 |
| Msa1300270 | AT4G10930.2 | 29.193 | 161 | 82 | 7 | 32 | 165 | 31 | 186 | 5.73e-12 | 69.7 |
| Msa1300270 | AT4G10930.1 | 29.193 | 161 | 82 | 7 | 32 | 165 | 31 | 186 | 6.04e-12 | 69.7 |
Find 153 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAACTGCTTCGTGAAAAT+TGG | 0.164253 | 8_3:-61801327 | Msa1300270:CDS |
| TGAATTCTACTTGTTCTTCT+AGG | 0.221047 | 8_3:+61801049 | None:intergenic |
| CTTTAAGAAGTGGTAAATTA+AGG | 0.236521 | 8_3:-61801300 | Msa1300270:CDS |
| CTGATATTCCTTTACTTGAT+AGG | 0.247121 | 8_3:-61801408 | Msa1300270:CDS |
| ATCCTTCTAAATGAGTATTA+TGG | 0.255331 | 8_3:+61800786 | None:intergenic |
| TTTCAATTTCTTTACCATTT+AGG | 0.268700 | 8_3:+61799795 | None:intergenic |
| GTCACACTTCTCCTGCATTT+TGG | 0.285478 | 8_3:+61800913 | None:intergenic |
| TTAGCTATCAATAAACAATT+AGG | 0.302117 | 8_3:-61800470 | Msa1300270:intron |
| GTACATAAAGTCTAATGTTC+TGG | 0.310120 | 8_3:+61800937 | None:intergenic |
| AAAGATCACATATTAGTATA+AGG | 0.325967 | 8_3:+61801671 | None:intergenic |
| TTAAATATTGTGAGAGGAAC+AGG | 0.351776 | 8_3:-61801490 | Msa1300270:CDS |
| ACTACTAGTATGGACCTTAC+TGG | 0.359804 | 8_3:+61800745 | None:intergenic |
| ACTTCTGAAACTGAAGATTA+TGG | 0.364745 | 8_3:+61800073 | None:intergenic |
| AAAGCATTGCCGGCAACAAT+TGG | 0.364853 | 8_3:+61800038 | None:intergenic |
| TTCTGCTCAGAAGACAAATT+CGG | 0.369067 | 8_3:+61802949 | None:intergenic |
| ATTAGATGATTCACATTCAA+TGG | 0.372803 | 8_3:-61801203 | Msa1300270:CDS |
| TGTGGGCACTACTACTAGTA+TGG | 0.376382 | 8_3:+61800735 | None:intergenic |
| ATTTAATGCCCAATTGTTGC+CGG | 0.388879 | 8_3:-61800047 | Msa1300270:CDS |
| TTGCCTTGCAACTACCTTGA+AGG | 0.388899 | 8_3:+61800182 | None:intergenic |
| AATTTAGTTTAACAAGAGAT+TGG | 0.390354 | 8_3:+61800501 | None:intergenic |
| CGAAGACATGAAAGCATTGC+CGG | 0.390475 | 8_3:+61800028 | None:intergenic |
| CTTCGTTTGCATCATGGAAT+GGG | 0.391668 | 8_3:-61802744 | Msa1300270:CDS |
| AACCATAATACTCATTTAGA+AGG | 0.398353 | 8_3:-61800788 | Msa1300270:CDS |
| CATTGTGACAGGGAGCTTTG+TGG | 0.398680 | 8_3:+61800717 | None:intergenic |
| CGACACAGGTTTCTTACCTT+CGG | 0.400888 | 8_3:+61801375 | None:intergenic |
| AATATCCACATCCTTCTTAG+AGG | 0.404123 | 8_3:+61800601 | None:intergenic |
| GGCATTTCTTTCATTGTGAC+AGG | 0.404307 | 8_3:+61800706 | None:intergenic |
| TTGCCTGAGGCCCTAAGCTA+AGG | 0.405798 | 8_3:+61799877 | None:intergenic |
| ATACTCATTTAGAAGGATAC+AGG | 0.406220 | 8_3:-61800781 | Msa1300270:CDS |
| GAAAACAATAATCACTGAAA+TGG | 0.406971 | 8_3:+61799930 | None:intergenic |
| TTCAGGTTGCCCCTTAGCTT+AGG | 0.407433 | 8_3:-61799888 | Msa1300270:three_prime_UTR |
| GCTTCGTTTGCATCATGGAA+TGG | 0.409819 | 8_3:-61802745 | Msa1300270:CDS |
| AAGAGGTTGGCTAAAAGCTT+CGG | 0.412773 | 8_3:-61800566 | Msa1300270:CDS |
| TGATATTCCTTTACTTGATA+GGG | 0.413112 | 8_3:-61801407 | Msa1300270:CDS |
| ACAAAGGCAGTCTGCTTACT+TGG | 0.414772 | 8_3:-61800675 | Msa1300270:CDS |
| AAGAACAAGTAGAATTCAAC+AGG | 0.416343 | 8_3:-61801044 | Msa1300270:CDS |
| CGTTCAGCATTAGAATCAAC+AGG | 0.416387 | 8_3:+61801730 | None:intergenic |
| TGACAAAACCAATCACCTTC+AGG | 0.418997 | 8_3:+61801601 | None:intergenic |
| GCAACTGTGTAAATAAATTC+AGG | 0.421174 | 8_3:-61799905 | Msa1300270:three_prime_UTR |
| TCAGGTTGCCCCTTAGCTTA+GGG | 0.421397 | 8_3:-61799887 | Msa1300270:three_prime_UTR |
| ATTGTGACAGGGAGCTTTGT+GGG | 0.421453 | 8_3:+61800718 | None:intergenic |
| TAAGATTCCTATTCGCGATC+AGG | 0.423084 | 8_3:-61802627 | Msa1300270:intron |
| TCCTCTCACAATATTTAAGA+TGG | 0.424076 | 8_3:+61801495 | None:intergenic |
| AGAGGTTGGCTAAAAGCTTC+GGG | 0.425317 | 8_3:-61800565 | Msa1300270:CDS |
| TCATGATTGTGCTGTTTCCC+TGG | 0.425637 | 8_3:-61801581 | Msa1300270:CDS |
| CATAGCAAAACATTTCAATC+TGG | 0.432016 | 8_3:-61801274 | Msa1300270:CDS |
| TATAATTAGCATTAGTCTCC+AGG | 0.433571 | 8_3:+61801563 | None:intergenic |
| GGCAAGCAGCCAAGATGGTA+TGG | 0.433665 | 8_3:+61800154 | None:intergenic |
| ACACCGTTCCTGAAGGTGAT+TGG | 0.439694 | 8_3:-61801609 | Msa1300270:CDS |
| AGACTGCCTTTGTTCCTTTG+AGG | 0.442729 | 8_3:+61800685 | None:intergenic |
| TACATAAAGTCTAATGTTCT+GGG | 0.448158 | 8_3:+61800938 | None:intergenic |
| AAGATGACGTTGACAAAGCT+TGG | 0.449233 | 8_3:-61801108 | Msa1300270:CDS |
| TCTGCTCAGAAGACAAATTC+GGG | 0.455964 | 8_3:+61802950 | None:intergenic |
| CGCAGGTGTCGAAACCTTCA+AGG | 0.466026 | 8_3:-61800196 | Msa1300270:intron |
| ACTGAAGATTATGGTCAGTA+TGG | 0.467842 | 8_3:+61800082 | None:intergenic |
| AAATCATCGGTCTCCGATGT+TGG | 0.470526 | 8_3:-61800864 | Msa1300270:CDS |
| GCTTACTTGGTAACTTCAGT+AGG | 0.472358 | 8_3:-61800662 | Msa1300270:CDS |
| AATCATCGGTCTCCGATGTT+GGG | 0.475724 | 8_3:-61800863 | Msa1300270:CDS |
| TACGAACGTTTGAGAATCTC+TGG | 0.476070 | 8_3:+61802690 | None:intergenic |
| CCATTGGTCTTCTAACCACT+TGG | 0.476561 | 8_3:+61801464 | None:intergenic |
| CACTGTTAATTTAATGTTGG+AGG | 0.484776 | 8_3:-61799851 | Msa1300270:three_prime_UTR |
| TTGCAGCAATCAATTTGTGC+AGG | 0.486323 | 8_3:+61802779 | None:intergenic |
| GCAAATTCACGACCACCGTC+TGG | 0.486453 | 8_3:-61802974 | Msa1300270:five_prime_UTR |
| CCGCACTGTTAATTTAATGT+TGG | 0.487345 | 8_3:-61799854 | Msa1300270:three_prime_UTR |
| AGAATGACCTGATCGCGAAT+AGG | 0.488034 | 8_3:+61802620 | None:intergenic |
| GACTAATGCTAATTATATGC+TGG | 0.488179 | 8_3:-61801557 | Msa1300270:CDS |
| AAGTAGAATTCAACAGGAAG+TGG | 0.490243 | 8_3:-61801038 | Msa1300270:CDS |
| TGGGCATCGAGATTCATGTT+TGG | 0.492358 | 8_3:+61802721 | None:intergenic |
| AAATTCCACAGCAAACATCT+TGG | 0.499946 | 8_3:+61802828 | None:intergenic |
| TGGGAGAGAAAAGGCAAAGT+AGG | 0.501891 | 8_3:-61800844 | Msa1300270:CDS |
| GTTGGACTGTGGATTGTTGA+CGG | 0.502066 | 8_3:+61801170 | None:intergenic |
| TGCCTGAGGCCCTAAGCTAA+GGG | 0.502109 | 8_3:+61799878 | None:intergenic |
| TTCTAGGTTTACCATCCTCA+TGG | 0.502370 | 8_3:-61801769 | Msa1300270:intron |
| CTACTAGTATGGACCTTACT+GGG | 0.506180 | 8_3:+61800746 | None:intergenic |
| GCAAGCCACCCATACCATCT+TGG | 0.510712 | 8_3:-61800163 | Msa1300270:CDS |
| CTGCTCACCCTATCAAGTAA+AGG | 0.512028 | 8_3:+61801400 | None:intergenic |
| GAGAATCTCTGGCGACAAAG+TGG | 0.512531 | 8_3:+61802701 | None:intergenic |
| TTTCAATAAAGAAAAGAGGT+TGG | 0.515495 | 8_3:-61800579 | Msa1300270:CDS |
| ATATTTAAGATGGTTACATC+AGG | 0.520921 | 8_3:+61801505 | None:intergenic |
| AATTGGAATTCTTTAAGAAG+TGG | 0.523493 | 8_3:-61801310 | Msa1300270:CDS |
| AAGCATTGCCGGCAACAATT+GGG | 0.527114 | 8_3:+61800039 | None:intergenic |
| ATGGCTGCATACTGAGTTCG+AGG | 0.528787 | 8_3:+61800101 | None:intergenic |
| GTTAATTTAATGTTGGAGGT+AGG | 0.529861 | 8_3:-61799847 | Msa1300270:three_prime_UTR |
| AATTCTAGTTCTTTATCAAG+TGG | 0.532006 | 8_3:-61801229 | Msa1300270:CDS |
| CTTTATGTACGCCAAAATGC+AGG | 0.532125 | 8_3:-61800924 | Msa1300270:CDS |
| CAATGAAAGAAATGCCTCAA+AGG | 0.533882 | 8_3:-61800699 | Msa1300270:CDS |
| TGTCGTACAGGAGATGCCAT+TGG | 0.542278 | 8_3:+61801448 | None:intergenic |
| CGATGTTGTCAAGTCGGTGT+TGG | 0.542402 | 8_3:-61800001 | Msa1300270:CDS |
| TTCTCTAGCACCACTGCATG+AGG | 0.543758 | 8_3:+61801006 | None:intergenic |
| GGAACGTCCATTGCCCAGTA+AGG | 0.546548 | 8_3:-61800759 | Msa1300270:CDS |
| ATTAGAATCAACAGGACCAC+TGG | 0.553330 | 8_3:+61801738 | None:intergenic |
| CTCCGATGTTGGGAGAGAAA+AGG | 0.553404 | 8_3:-61800853 | Msa1300270:CDS |
| AAGAAAAGACATCATGCATA+GGG | 0.555505 | 8_3:+61802663 | None:intergenic |
| ATTCAACAGGAAGTGGATGA+TGG | 0.555748 | 8_3:-61801031 | Msa1300270:CDS |
| TAGCGTGTTCACCTCTAAGA+AGG | 0.556066 | 8_3:-61800612 | Msa1300270:CDS |
| GAAGAAAAGACATCATGCAT+AGG | 0.556171 | 8_3:+61802662 | None:intergenic |
| TTGATGCGTTTGTTTGATGT+AGG | 0.559764 | 8_3:+61802893 | None:intergenic |
| TGTGGATTGTTGACGGCTTG+CGG | 0.563674 | 8_3:+61801177 | None:intergenic |
| TTGGCTAAAAGCTTCGGGAA+TGG | 0.564675 | 8_3:-61800560 | Msa1300270:CDS |
| AGAATCTCTGGCGACAAAGT+GGG | 0.566207 | 8_3:+61802702 | None:intergenic |
| TCAAGTAACATGTTGAGTAA+TGG | 0.571263 | 8_3:-61801139 | Msa1300270:CDS |
| GTTCACCTCTAAGAAGGATG+TGG | 0.574677 | 8_3:-61800606 | Msa1300270:CDS |
| GTATGGACCTTACTGGGCAA+TGG | 0.575352 | 8_3:+61800752 | None:intergenic |
| GTAGGTTCAGCACCCTCAAG+TGG | 0.578222 | 8_3:-61800644 | Msa1300270:CDS |
| TGGTCATATTTCCATGAGGA+TGG | 0.580674 | 8_3:+61801758 | None:intergenic |
| CAATTTCTTTACCATTTAGG+CGG | 0.581823 | 8_3:+61799798 | None:intergenic |
| AGCAAAACATTTCAATCTGG+TGG | 0.582593 | 8_3:-61801271 | Msa1300270:CDS |
| TGCAGCAATCAATTTGTGCA+GGG | 0.587281 | 8_3:+61802780 | None:intergenic |
| GCACGCTGGACTTCCGACAC+AGG | 0.591609 | 8_3:+61801361 | None:intergenic |
| AGTAACATGTTGAGTAATGG+TGG | 0.593885 | 8_3:-61801136 | Msa1300270:CDS |
| GGGAGAGAAAAGGCAAAGTA+GGG | 0.594053 | 8_3:-61800843 | Msa1300270:CDS |
| ATTAACAGTGCGGTTGCCTG+AGG | 0.595060 | 8_3:+61799864 | None:intergenic |
| GGAATGGCAAGCAGCCAAGA+TGG | 0.603129 | 8_3:+61800149 | None:intergenic |
| GCAAGCAGCCAAGATGGTAT+GGG | 0.603934 | 8_3:+61800155 | None:intergenic |
| CGCAAGTGCTGTATTTGCGA+TGG | 0.604447 | 8_3:-61801709 | Msa1300270:CDS |
| GAACATTACGCAGGGCACGC+TGG | 0.605204 | 8_3:+61801347 | None:intergenic |
| TTTAATGTTGGAGGTAGGCG+TGG | 0.605272 | 8_3:-61799842 | Msa1300270:three_prime_UTR |
| TTGGGCTACACCGTTCCTGA+AGG | 0.607395 | 8_3:-61801616 | Msa1300270:CDS |
| CGTGAACGATGTTGTCAAGT+CGG | 0.608768 | 8_3:-61800007 | Msa1300270:CDS |
| GCATTTCTTTCATTGTGACA+GGG | 0.609228 | 8_3:+61800707 | None:intergenic |
| AAACCAATCACCTTCAGGAA+CGG | 0.610160 | 8_3:+61801606 | None:intergenic |
| ATAATTAGCATTAGTCTCCA+GGG | 0.614978 | 8_3:+61801564 | None:intergenic |
| GAAATGCCTCAAAGGAACAA+AGG | 0.615422 | 8_3:-61800691 | Msa1300270:CDS |
| CCAAGTGGTTAGAAGACCAA+TGG | 0.619603 | 8_3:-61801464 | Msa1300270:CDS |
| TCTCTAGCACCACTGCATGA+GGG | 0.624636 | 8_3:+61801007 | None:intergenic |
| AGCAGCCAAGATGGTATGGG+TGG | 0.626338 | 8_3:+61800158 | None:intergenic |
| ACCATCTTAAATATTGTGAG+AGG | 0.626569 | 8_3:-61801496 | Msa1300270:CDS |
| AAGACAAATTCGGGACCAGA+CGG | 0.632549 | 8_3:+61802959 | None:intergenic |
| GCAAAGTAGGGTCTTGTGTG+AGG | 0.638155 | 8_3:-61800831 | Msa1300270:CDS |
| TAAAGGAATATCAGAAGACA+AGG | 0.638369 | 8_3:+61801417 | None:intergenic |
| AGCTTGGAAAATGATGCGTA+AGG | 0.638683 | 8_3:-61801092 | Msa1300270:CDS |
| GAAGCAGTTGAACATTACGC+AGG | 0.639695 | 8_3:+61801338 | None:intergenic |
| TACTCATTTAGAAGGATACA+GGG | 0.641504 | 8_3:-61800780 | Msa1300270:CDS |
| AAACCTTCAAGGTAGTTGCA+AGG | 0.642576 | 8_3:-61800185 | Msa1300270:CDS |
| CGAAGGTAAGAAACCTGTGT+CGG | 0.644076 | 8_3:-61801374 | Msa1300270:CDS |
| GATAGGGTGAGCAGATCCGA+AGG | 0.646279 | 8_3:-61801391 | Msa1300270:CDS |
| ACAAAATGTTGAGCTAAAAG+CGG | 0.648538 | 8_3:-61801530 | Msa1300270:CDS |
| GATGATGGTCCCTCATGCAG+TGG | 0.659027 | 8_3:-61801016 | Msa1300270:CDS |
| AAGCAGTTGAACATTACGCA+GGG | 0.660055 | 8_3:+61801339 | None:intergenic |
| ACTGAAGAAGAAGACGACAA+TGG | 0.660894 | 8_3:-61802857 | Msa1300270:CDS |
| GCCTGAGGCCCTAAGCTAAG+GGG | 0.662805 | 8_3:+61799879 | None:intergenic |
| CCTCATGGAAATATGACCAG+TGG | 0.662971 | 8_3:-61801754 | Msa1300270:CDS |
| TGATTGAGCACGTTGGACTG+TGG | 0.664126 | 8_3:+61801159 | None:intergenic |
| TGTTACTTGATTGAGCACGT+TGG | 0.679662 | 8_3:+61801152 | None:intergenic |
| TTAGATTCTGGGCAACTACG+AGG | 0.687829 | 8_3:+61800971 | None:intergenic |
| TTTGTTTGATGTAGGCAACG+AGG | 0.700541 | 8_3:+61802901 | None:intergenic |
| ACAAATTCGGGACCAGACGG+TGG | 0.701984 | 8_3:+61802962 | None:intergenic |
| GGAATTTGCTACATCGAACG+CGG | 0.706610 | 8_3:-61802812 | Msa1300270:CDS |
| AGGAATCTTAACATCCCGTG+AGG | 0.714302 | 8_3:+61802640 | None:intergenic |
| GAGAGGAACAGGCAGCCAAG+TGG | 0.718089 | 8_3:-61801479 | Msa1300270:CDS |
| CCAACATTAAATTAACAGTG+CGG | 0.728484 | 8_3:+61799854 | None:intergenic |
| AATAACCAAGATGTTTGCTG+TGG | 0.733108 | 8_3:-61802833 | Msa1300270:CDS |
| CCACTGGTCATATTTCCATG+AGG | 0.735026 | 8_3:+61801754 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATTAATAATGCACTAAT+TGG | - | chr8_3:61800527-61800546 | Msa1300270:CDS | 15.0% |
| !!! | ATATTTTCAATAAAGAAAAG+AGG | - | chr8_3:61802135-61802154 | Msa1300270:intron | 15.0% |
| !! | AATACTTTCATTCAATTAAA+AGG | + | chr8_3:61802482-61802501 | None:intergenic | 15.0% |
| !!! | TTTTTCACTATCATTAGTTT+AGG | + | chr8_3:61800346-61800365 | None:intergenic | 20.0% |
| !! | AAGAAAAAAATGACAACTAT+CGG | - | chr8_3:61800550-61800569 | Msa1300270:CDS | 20.0% |
| !! | TAGATACATTTGACAATATT+TGG | - | chr8_3:61800651-61800670 | Msa1300270:CDS | 20.0% |
| !! | AGATACATTTGACAATATTT+GGG | - | chr8_3:61800652-61800671 | Msa1300270:CDS | 20.0% |
| !!! | ATAGAAGGAATAAAATTTTG+AGG | - | chr8_3:61800710-61800729 | Msa1300270:CDS | 20.0% |
| !!! | TAGAAGGAATAAAATTTTGA+GGG | - | chr8_3:61800711-61800730 | Msa1300270:CDS | 20.0% |
| !! | ATAGACAACAAAATTATGAA+AGG | + | chr8_3:61800815-61800834 | None:intergenic | 20.0% |
| !! | AAAGATCACATATTAGTATA+AGG | + | chr8_3:61801050-61801069 | None:intergenic | 20.0% |
| !!! | ATGATTTTCCAAATTTTTTG+GGG | + | chr8_3:61801841-61801860 | None:intergenic | 20.0% |
| !!! | GATGATTTTCCAAATTTTTT+GGG | + | chr8_3:61801842-61801861 | None:intergenic | 20.0% |
| !! | CAAAAAATTTGGAAAATCAT+CGG | - | chr8_3:61801841-61801860 | Msa1300270:intron | 20.0% |
| !!! | AATTTAGTTTAACAAGAGAT+TGG | + | chr8_3:61802220-61802239 | None:intergenic | 20.0% |
| !! | TTAGCTATCAATAAACAATT+AGG | - | chr8_3:61802248-61802267 | Msa1300270:intron | 20.0% |
| !! | TTTCAATTTCTTTACCATTT+AGG | + | chr8_3:61802926-61802945 | None:intergenic | 20.0% |
| !! | ATGCAATTTTGAATGTGTAA+CGG | + | chr8_3:61800129-61800148 | None:intergenic | 25.0% |
| ! | AGAAAAAAATGACAACTATC+GGG | - | chr8_3:61800551-61800570 | Msa1300270:CDS | 25.0% |
| ! | ATATTGTCAAATGTATCTAG+TGG | + | chr8_3:61800650-61800669 | None:intergenic | 25.0% |
| ! | GATACATTTGACAATATTTG+GGG | - | chr8_3:61800653-61800672 | Msa1300270:CDS | 25.0% |
| ! | TATATAGTAAAACACTCTTG+AGG | - | chr8_3:61800686-61800705 | Msa1300270:CDS | 25.0% |
| !! | AGAAGGAATAAAATTTTGAG+GGG | - | chr8_3:61800712-61800731 | Msa1300270:CDS | 25.0% |
| ! | GTCTATATATTATTTACTGC+TGG | - | chr8_3:61800829-61800848 | Msa1300270:CDS | 25.0% |
| ! | TAATGTTATAAGTAACCAAC+AGG | - | chr8_3:61800895-61800914 | Msa1300270:CDS | 25.0% |
| !! | TAAAAAAATCATTAGCCTGT+TGG | + | chr8_3:61800913-61800932 | None:intergenic | 25.0% |
| !! | ATATTTAAGATGGTTACATC+AGG | + | chr8_3:61801216-61801235 | None:intergenic | 25.0% |
| ! | TGATATTCCTTTACTTGATA+GGG | - | chr8_3:61801311-61801330 | Msa1300270:CDS | 25.0% |
| !! | AATTGGAATTCTTTAAGAAG+TGG | - | chr8_3:61801408-61801427 | Msa1300270:CDS | 25.0% |
| !! | CTTTAAGAAGTGGTAAATTA+AGG | - | chr8_3:61801418-61801437 | Msa1300270:CDS | 25.0% |
| !!! | AATTCTAGTTCTTTATCAAG+TGG | - | chr8_3:61801489-61801508 | Msa1300270:CDS | 25.0% |
| ! | ATTAGATGATTCACATTCAA+TGG | - | chr8_3:61801515-61801534 | Msa1300270:CDS | 25.0% |
| !!! | GTTGTTGTTTTTTAGATTCT+GGG | + | chr8_3:61801761-61801780 | None:intergenic | 25.0% |
| ! | TACATAAAGTCTAATGTTCT+GGG | + | chr8_3:61801783-61801802 | None:intergenic | 25.0% |
| !!! | TGATTTTCCAAATTTTTTGG+GGG | + | chr8_3:61801840-61801859 | None:intergenic | 25.0% |
| !! | CGATGATTTTCCAAATTTTT+TGG | + | chr8_3:61801843-61801862 | None:intergenic | 25.0% |
| ! | AACCATAATACTCATTTAGA+AGG | - | chr8_3:61801930-61801949 | Msa1300270:intron | 25.0% |
| ! | ATCCTTCTAAATGAGTATTA+TGG | + | chr8_3:61801935-61801954 | None:intergenic | 25.0% |
| ! | TTTCAATAAAGAAAAGAGGT+TGG | - | chr8_3:61802139-61802158 | Msa1300270:intron | 25.0% |
| ! | AATGATCATGTAAATATGGA+GGG | + | chr8_3:61802305-61802324 | None:intergenic | 25.0% |
| ! | CAACAATGATCATGTAAATA+TGG | + | chr8_3:61802309-61802328 | None:intergenic | 25.0% |
| ! | CATATTTACATGATCATTGT+TGG | - | chr8_3:61802307-61802326 | Msa1300270:intron | 25.0% |
| ! | GAAAACAATAATCACTGAAA+TGG | + | chr8_3:61802791-61802810 | None:intergenic | 25.0% |
| ! | TTCTTCTTCAGTTTTCACTT+CGG | + | chr8_3:61799853-61799872 | None:intergenic | 30.0% |
| TGCAAACGAAGCAAAAATAA+TGG | + | chr8_3:61799965-61799984 | None:intergenic | 30.0% | |
| AAGAAAAGACATCATGCATA+GGG | + | chr8_3:61800058-61800077 | None:intergenic | 30.0% | |
| TGTCAACAATTCATGTGTTA+GGG | - | chr8_3:61800227-61800246 | Msa1300270:intron | 30.0% | |
| TTAGTTTAGGAATTCACTAG+CGG | + | chr8_3:61800333-61800352 | None:intergenic | 30.0% | |
| ATCTTGACTGAAATTGTAGA+GGG | - | chr8_3:61800373-61800392 | Msa1300270:intron | 30.0% | |
| TGAAGAACAAAGTCAAATCT+TGG | - | chr8_3:61800435-61800454 | Msa1300270:intron | 30.0% | |
| ! | GTCTAAAATCTAAACATTCG+CGG | + | chr8_3:61800769-61800788 | None:intergenic | 30.0% |
| ! | ATAATTAGCATTAGTCTCCA+GGG | + | chr8_3:61801157-61801176 | None:intergenic | 30.0% |
| ! | TATAATTAGCATTAGTCTCC+AGG | + | chr8_3:61801158-61801177 | None:intergenic | 30.0% |
| GACTAATGCTAATTATATGC+TGG | - | chr8_3:61801161-61801180 | Msa1300270:CDS | 30.0% | |
| !!! | CTTTTAGCTCAACATTTTGT+TGG | + | chr8_3:61801188-61801207 | None:intergenic | 30.0% |
| ACAAAATGTTGAGCTAAAAG+CGG | - | chr8_3:61801188-61801207 | Msa1300270:CDS | 30.0% | |
| ACCATCTTAAATATTGTGAG+AGG | - | chr8_3:61801222-61801241 | Msa1300270:CDS | 30.0% | |
| TCCTCTCACAATATTTAAGA+TGG | + | chr8_3:61801226-61801245 | None:intergenic | 30.0% | |
| TTAAATATTGTGAGAGGAAC+AGG | - | chr8_3:61801228-61801247 | Msa1300270:CDS | 30.0% | |
| TAAAGGAATATCAGAAGACA+AGG | + | chr8_3:61801304-61801323 | None:intergenic | 30.0% | |
| CTGATATTCCTTTACTTGAT+AGG | - | chr8_3:61801310-61801329 | Msa1300270:CDS | 30.0% | |
| ! | CAGATTGAAATGTTTTGCTA+TGG | + | chr8_3:61801446-61801465 | None:intergenic | 30.0% |
| CATAGCAAAACATTTCAATC+TGG | - | chr8_3:61801444-61801463 | Msa1300270:CDS | 30.0% | |
| TCAAGTAACATGTTGAGTAA+TGG | - | chr8_3:61801579-61801598 | Msa1300270:CDS | 30.0% | |
| TGAATTCTACTTGTTCTTCT+AGG | + | chr8_3:61801672-61801691 | None:intergenic | 30.0% | |
| AAGAACAAGTAGAATTCAAC+AGG | - | chr8_3:61801674-61801693 | Msa1300270:CDS | 30.0% | |
| !!! | GGTTGTTGTTTTTTAGATTC+TGG | + | chr8_3:61801762-61801781 | None:intergenic | 30.0% |
| GTACATAAAGTCTAATGTTC+TGG | + | chr8_3:61801784-61801803 | None:intergenic | 30.0% | |
| ATACTCATTTAGAAGGATAC+AGG | - | chr8_3:61801937-61801956 | Msa1300270:intron | 30.0% | |
| TACTCATTTAGAAGGATACA+GGG | - | chr8_3:61801938-61801957 | Msa1300270:intron | 30.0% | |
| ATGATCATGTAAATATGGAG+GGG | + | chr8_3:61802304-61802323 | None:intergenic | 30.0% | |
| CAATGATCATGTAAATATGG+AGG | + | chr8_3:61802306-61802325 | None:intergenic | 30.0% | |
| !! | AAATGGATTGTAAAAGTGTG+TGG | + | chr8_3:61802357-61802376 | None:intergenic | 30.0% |
| ! | ACACTTTTACAATCCATTTG+TGG | - | chr8_3:61802358-61802377 | Msa1300270:intron | 30.0% |
| ! | TATATTAGACTTTTGCTGCT+CGG | + | chr8_3:61802593-61802612 | None:intergenic | 30.0% |
| !! | ACTTCTGAAACTGAAGATTA+TGG | + | chr8_3:61802648-61802667 | None:intergenic | 30.0% |
| GCAACTGTGTAAATAAATTC+AGG | - | chr8_3:61802813-61802832 | Msa1300270:CDS | 30.0% | |
| CCAACATTAAATTAACAGTG+CGG | + | chr8_3:61802867-61802886 | None:intergenic | 30.0% | |
| CACTGTTAATTTAATGTTGG+AGG | - | chr8_3:61802867-61802886 | Msa1300270:CDS | 30.0% | |
| GTTAATTTAATGTTGGAGGT+AGG | - | chr8_3:61802871-61802890 | Msa1300270:CDS | 30.0% | |
| CAATTTCTTTACCATTTAGG+CGG | + | chr8_3:61802923-61802942 | None:intergenic | 30.0% | |
| TTCTGCTCAGAAGACAAATT+CGG | + | chr8_3:61799772-61799791 | None:intergenic | 35.0% | |
| TTGATGCGTTTGTTTGATGT+AGG | + | chr8_3:61799828-61799847 | None:intergenic | 35.0% | |
| ! | AATAACCAAGATGTTTGCTG+TGG | - | chr8_3:61799885-61799904 | Msa1300270:three_prime_UTR | 35.0% |
| AAATTCCACAGCAAACATCT+TGG | + | chr8_3:61799893-61799912 | None:intergenic | 35.0% | |
| ! | TTTTTGCTTCGTTTGCATCA+TGG | - | chr8_3:61799968-61799987 | Msa1300270:exon | 35.0% |
| GAAGAAAAGACATCATGCAT+AGG | + | chr8_3:61800059-61800078 | None:intergenic | 35.0% | |
| ! | ATGATGTCTTTTCTTCCTCA+CGG | - | chr8_3:61800063-61800082 | Msa1300270:CDS | 35.0% |
| TCAAAATTGCATGAAACCCT+AGG | - | chr8_3:61800137-61800156 | Msa1300270:CDS | 35.0% | |
| AATGAAGTCTAGCTAACCTA+GGG | + | chr8_3:61800156-61800175 | None:intergenic | 35.0% | |
| TAATGAAGTCTAGCTAACCT+AGG | + | chr8_3:61800157-61800176 | None:intergenic | 35.0% | |
| ! | ATAAAAAAGAGCACACTCCT+AGG | + | chr8_3:61800183-61800202 | None:intergenic | 35.0% |
| !!! | TGTGCTCTTTTTTATGTCTC+AGG | - | chr8_3:61800188-61800207 | Msa1300270:CDS | 35.0% |
| !!! | GTGCTCTTTTTTATGTCTCA+GGG | - | chr8_3:61800189-61800208 | Msa1300270:CDS | 35.0% |
| CATGAATTGTTGACAGCTAT+GGG | + | chr8_3:61800222-61800241 | None:intergenic | 35.0% | |
| ACATGAATTGTTGACAGCTA+TGG | + | chr8_3:61800223-61800242 | None:intergenic | 35.0% | |
| CTGTCAACAATTCATGTGTT+AGG | - | chr8_3:61800226-61800245 | Msa1300270:intron | 35.0% | |
| TAGTTTAGGAATTCACTAGC+GGG | + | chr8_3:61800332-61800351 | None:intergenic | 35.0% | |
| GATCTTGACTGAAATTGTAG+AGG | - | chr8_3:61800372-61800391 | Msa1300270:intron | 35.0% | |
| TCTTGACTGAAATTGTAGAG+GGG | - | chr8_3:61800374-61800393 | Msa1300270:intron | 35.0% | |
| ! | AAAGTCAAATCTTGGTGTAG+TGG | - | chr8_3:61800443-61800462 | Msa1300270:intron | 35.0% |
| CGATTCCTCTCAAAAACTAT+CGG | - | chr8_3:61800576-61800595 | Msa1300270:CDS | 35.0% | |
| GATTCCTCTCAAAAACTATC+GGG | - | chr8_3:61800577-61800596 | Msa1300270:CDS | 35.0% | |
| TTGTCAAATGTATCTAGTGG+CGG | + | chr8_3:61800647-61800666 | None:intergenic | 35.0% | |
| AAACACTCTTGAGGAATAGA+AGG | - | chr8_3:61800695-61800714 | Msa1300270:CDS | 35.0% | |
| !! | TAAAATTTTGAGGGGAGACA+TGG | - | chr8_3:61800720-61800739 | Msa1300270:CDS | 35.0% |
| ! | GTTTCACATACGTTTTGTGT+TGG | - | chr8_3:61801078-61801097 | Msa1300270:CDS | 35.0% |
| ! | ACATACGTTTTGTGTTGGAT+TGG | - | chr8_3:61801083-61801102 | Msa1300270:CDS | 35.0% |
| ! | CATACGTTTTGTGTTGGATT+GGG | - | chr8_3:61801084-61801103 | Msa1300270:CDS | 35.0% |
| !! | AAGGAATTGTTTTGTCGTAC+AGG | + | chr8_3:61801285-61801304 | None:intergenic | 35.0% |
| TTCAACTGCTTCGTGAAAAT+TGG | - | chr8_3:61801391-61801410 | Msa1300270:CDS | 35.0% | |
| AGCAAAACATTTCAATCTGG+TGG | - | chr8_3:61801447-61801466 | Msa1300270:CDS | 35.0% | |
| AGTAACATGTTGAGTAATGG+TGG | - | chr8_3:61801582-61801601 | Msa1300270:CDS | 35.0% | |
| AAGTAGAATTCAACAGGAAG+TGG | - | chr8_3:61801680-61801699 | Msa1300270:CDS | 35.0% | |
| GCATTTCTTTCATTGTGACA+GGG | + | chr8_3:61802014-61802033 | None:intergenic | 35.0% | |
| CAATGAAAGAAATGCCTCAA+AGG | - | chr8_3:61802019-61802038 | Msa1300270:intron | 35.0% | |
| ! | CTACTAGATTTTCCACTTGA+GGG | + | chr8_3:61802089-61802108 | None:intergenic | 35.0% |
| AATATCCACATCCTTCTTAG+AGG | + | chr8_3:61802120-61802139 | None:intergenic | 35.0% | |
| TGATCATGTAAATATGGAGG+GGG | + | chr8_3:61802303-61802322 | None:intergenic | 35.0% | |
| GTTTATCTAGTGACCACAAA+TGG | + | chr8_3:61802374-61802393 | None:intergenic | 35.0% | |
| GGTCACTAGATAAACTCATT+TGG | - | chr8_3:61802379-61802398 | Msa1300270:intron | 35.0% | |
| ATGAGTATTCAGCAGTAACA+TGG | + | chr8_3:61802430-61802449 | None:intergenic | 35.0% | |
| GTCATATGCATGCTAATGAA+TGG | + | chr8_3:61802457-61802476 | None:intergenic | 35.0% | |
| ACTGAAGATTATGGTCAGTA+TGG | + | chr8_3:61802639-61802658 | None:intergenic | 35.0% | |
| ATTTAATGCCCAATTGTTGC+CGG | - | chr8_3:61802671-61802690 | Msa1300270:CDS | 35.0% | |
| CCGCACTGTTAATTTAATGT+TGG | - | chr8_3:61802864-61802883 | Msa1300270:CDS | 35.0% | |
| !! | AGTTTACTTTTCCGCCTAAA+TGG | - | chr8_3:61802909-61802928 | Msa1300270:CDS | 35.0% |
| TCTGCTCAGAAGACAAATTC+GGG | + | chr8_3:61799771-61799790 | None:intergenic | 40.0% | |
| TTTGTTTGATGTAGGCAACG+AGG | + | chr8_3:61799820-61799839 | None:intergenic | 40.0% | |
| ACTGAAGAAGAAGACGACAA+TGG | - | chr8_3:61799861-61799880 | Msa1300270:three_prime_UTR | 40.0% | |
| TGCAGCAATCAATTTGTGCA+GGG | + | chr8_3:61799941-61799960 | None:intergenic | 40.0% | |
| TTGCAGCAATCAATTTGTGC+AGG | + | chr8_3:61799942-61799961 | None:intergenic | 40.0% | |
| CTTCGTTTGCATCATGGAAT+GGG | - | chr8_3:61799974-61799993 | Msa1300270:exon | 40.0% | |
| TACGAACGTTTGAGAATCTC+TGG | + | chr8_3:61800031-61800050 | None:intergenic | 40.0% | |
| ! | TGATGTCTTTTCTTCCTCAC+GGG | - | chr8_3:61800064-61800083 | Msa1300270:CDS | 40.0% |
| TAAGATTCCTATTCGCGATC+AGG | - | chr8_3:61800091-61800110 | Msa1300270:CDS | 40.0% | |
| GCTAGACTTCATTAAGACCT+AGG | - | chr8_3:61800163-61800182 | Msa1300270:CDS | 40.0% | |
| CAACAATTCATGTGTTAGGG+CGG | - | chr8_3:61800230-61800249 | Msa1300270:intron | 40.0% | |
| ATTGAAGGCAAAGCTGTGTA+TGG | + | chr8_3:61800257-61800276 | None:intergenic | 40.0% | |
| TACACAGCTTTGCCTTCAAT+TGG | - | chr8_3:61800257-61800276 | Msa1300270:intron | 40.0% | |
| ACACAGCTTTGCCTTCAATT+GGG | - | chr8_3:61800258-61800277 | Msa1300270:intron | 40.0% | |
| AGTTTAGGAATTCACTAGCG+GGG | + | chr8_3:61800331-61800350 | None:intergenic | 40.0% | |
| TACTGCTGGTGATCAATGAA+TGG | - | chr8_3:61800843-61800862 | Msa1300270:CDS | 40.0% | |
| TTCTAGGTTTACCATCCTCA+TGG | - | chr8_3:61800949-61800968 | Msa1300270:CDS | 40.0% | |
| TGGTCATATTTCCATGAGGA+TGG | + | chr8_3:61800963-61800982 | None:intergenic | 40.0% | |
| ATTAGAATCAACAGGACCAC+TGG | + | chr8_3:61800983-61801002 | None:intergenic | 40.0% | |
| CGTTCAGCATTAGAATCAAC+AGG | + | chr8_3:61800991-61801010 | None:intergenic | 40.0% | |
| AAACCAATCACCTTCAGGAA+CGG | + | chr8_3:61801115-61801134 | None:intergenic | 40.0% | |
| TGACAAAACCAATCACCTTC+AGG | + | chr8_3:61801120-61801139 | None:intergenic | 40.0% | |
| AAGCAGTTGAACATTACGCA+GGG | + | chr8_3:61801382-61801401 | None:intergenic | 40.0% | |
| ! | TGTTACTTGATTGAGCACGT+TGG | + | chr8_3:61801569-61801588 | None:intergenic | 40.0% |
| AAGATGACGTTGACAAAGCT+TGG | - | chr8_3:61801610-61801629 | Msa1300270:CDS | 40.0% | |
| AGCTTGGAAAATGATGCGTA+AGG | - | chr8_3:61801626-61801645 | Msa1300270:CDS | 40.0% | |
| ATTCAACAGGAAGTGGATGA+TGG | - | chr8_3:61801687-61801706 | Msa1300270:CDS | 40.0% | |
| CTTTATGTACGCCAAAATGC+AGG | - | chr8_3:61801794-61801813 | Msa1300270:intron | 40.0% | |
| CTCTTGTCCCCCAAAAAATT+TGG | - | chr8_3:61801830-61801849 | Msa1300270:intron | 40.0% | |
| CTACTAGTATGGACCTTACT+GGG | + | chr8_3:61801975-61801994 | None:intergenic | 40.0% | |
| ACTACTAGTATGGACCTTAC+TGG | + | chr8_3:61801976-61801995 | None:intergenic | 40.0% | |
| GGCATTTCTTTCATTGTGAC+AGG | + | chr8_3:61802015-61802034 | None:intergenic | 40.0% | |
| GAAATGCCTCAAAGGAACAA+AGG | - | chr8_3:61802027-61802046 | Msa1300270:intron | 40.0% | |
| ! | GCTTACTTGGTAACTTCAGT+AGG | - | chr8_3:61802056-61802075 | Msa1300270:intron | 40.0% |
| ! | GCTACTAGATTTTCCACTTG+AGG | + | chr8_3:61802090-61802109 | None:intergenic | 40.0% |
| ! | AAGAGGTTGGCTAAAAGCTT+CGG | - | chr8_3:61802152-61802171 | Msa1300270:intron | 40.0% |
| AAACCTTCAAGGTAGTTGCA+AGG | - | chr8_3:61802533-61802552 | Msa1300270:intron | 40.0% | |
| !! | AAGTCGGTGTTGGAAAAAGT+GGG | - | chr8_3:61802727-61802746 | Msa1300270:CDS | 40.0% |
| AAGACAAATTCGGGACCAGA+CGG | + | chr8_3:61799762-61799781 | None:intergenic | 45.0% | |
| !! | GGAATTTGCTACATCGAACG+CGG | - | chr8_3:61799906-61799925 | Msa1300270:three_prime_UTR | 45.0% |
| GCTTCGTTTGCATCATGGAA+TGG | - | chr8_3:61799973-61799992 | Msa1300270:exon | 45.0% | |
| !! | TGGGCATCGAGATTCATGTT+TGG | + | chr8_3:61800000-61800019 | None:intergenic | 45.0% |
| AGAATCTCTGGCGACAAAGT+GGG | + | chr8_3:61800019-61800038 | None:intergenic | 45.0% | |
| AGGAATCTTAACATCCCGTG+AGG | + | chr8_3:61800081-61800100 | None:intergenic | 45.0% | |
| AGAATGACCTGATCGCGAAT+AGG | + | chr8_3:61800101-61800120 | None:intergenic | 45.0% | |
| TTCATTTAACCTCACGTGCG+TGG | - | chr8_3:61800473-61800492 | Msa1300270:CDS | 45.0% | |
| !! | CGATCCCGATAGTTTTTGAG+AGG | + | chr8_3:61800584-61800603 | None:intergenic | 45.0% |
| ! | GAGTCTGTTTAGCGAGTTGA+TGG | + | chr8_3:61800616-61800635 | None:intergenic | 45.0% |
| ! | AAATGTATCTAGTGGCGGAG+TGG | + | chr8_3:61800642-61800661 | None:intergenic | 45.0% |
| CCACTGGTCATATTTCCATG+AGG | + | chr8_3:61800967-61800986 | None:intergenic | 45.0% | |
| CCTCATGGAAATATGACCAG+TGG | - | chr8_3:61800964-61800983 | Msa1300270:CDS | 45.0% | |
| !! | TCATGATTGTGCTGTTTCCC+TGG | - | chr8_3:61801137-61801156 | Msa1300270:CDS | 45.0% |
| !! | CCATTGGTCTTCTAACCACT+TGG | + | chr8_3:61801257-61801276 | None:intergenic | 45.0% |
| CCAAGTGGTTAGAAGACCAA+TGG | - | chr8_3:61801254-61801273 | Msa1300270:CDS | 45.0% | |
| CTGCTCACCCTATCAAGTAA+AGG | + | chr8_3:61801321-61801340 | None:intergenic | 45.0% | |
| CGACACAGGTTTCTTACCTT+CGG | + | chr8_3:61801346-61801365 | None:intergenic | 45.0% | |
| CGAAGGTAAGAAACCTGTGT+CGG | - | chr8_3:61801344-61801363 | Msa1300270:CDS | 45.0% | |
| GAAGCAGTTGAACATTACGC+AGG | + | chr8_3:61801383-61801402 | None:intergenic | 45.0% | |
| ! | GTTGGACTGTGGATTGTTGA+CGG | + | chr8_3:61801551-61801570 | None:intergenic | 45.0% |
| TTAGATTCTGGGCAACTACG+AGG | + | chr8_3:61801750-61801769 | None:intergenic | 45.0% | |
| ! | GTCACACTTCTCCTGCATTT+TGG | + | chr8_3:61801808-61801827 | None:intergenic | 45.0% |
| AAATCATCGGTCTCCGATGT+TGG | - | chr8_3:61801854-61801873 | Msa1300270:intron | 45.0% | |
| AATCATCGGTCTCCGATGTT+GGG | - | chr8_3:61801855-61801874 | Msa1300270:intron | 45.0% | |
| ! | TGCCTTTTCTCTCCCAACAT+CGG | + | chr8_3:61801870-61801889 | None:intergenic | 45.0% |
| TGGGAGAGAAAAGGCAAAGT+AGG | - | chr8_3:61801874-61801893 | Msa1300270:intron | 45.0% | |
| GGGAGAGAAAAGGCAAAGTA+GGG | - | chr8_3:61801875-61801894 | Msa1300270:intron | 45.0% | |
| TGTGGGCACTACTACTAGTA+TGG | + | chr8_3:61801986-61802005 | None:intergenic | 45.0% | |
| ! | ATTGTGACAGGGAGCTTTGT+GGG | + | chr8_3:61802003-61802022 | None:intergenic | 45.0% |
| AGACTGCCTTTGTTCCTTTG+AGG | + | chr8_3:61802036-61802055 | None:intergenic | 45.0% | |
| ACAAAGGCAGTCTGCTTACT+TGG | - | chr8_3:61802043-61802062 | Msa1300270:intron | 45.0% | |
| ! | TAGCGTGTTCACCTCTAAGA+AGG | - | chr8_3:61802106-61802125 | Msa1300270:intron | 45.0% |
| ! | GTTCACCTCTAAGAAGGATG+TGG | - | chr8_3:61802112-61802131 | Msa1300270:intron | 45.0% |
| ! | AGAGGTTGGCTAAAAGCTTC+GGG | - | chr8_3:61802153-61802172 | Msa1300270:intron | 45.0% |
| TTGGCTAAAAGCTTCGGGAA+TGG | - | chr8_3:61802158-61802177 | Msa1300270:intron | 45.0% | |
| TTGCCTTGCAACTACCTTGA+AGG | + | chr8_3:61802539-61802558 | None:intergenic | 45.0% | |
| ! | TAGACTTTTGCTGCTCGGAA+TGG | + | chr8_3:61802588-61802607 | None:intergenic | 45.0% |
| ! | AAGCATTGCCGGCAACAATT+GGG | + | chr8_3:61802682-61802701 | None:intergenic | 45.0% |
| !! | AAAGCATTGCCGGCAACAAT+TGG | + | chr8_3:61802683-61802702 | None:intergenic | 45.0% |
| !! | CGAAGACATGAAAGCATTGC+CGG | + | chr8_3:61802693-61802712 | None:intergenic | 45.0% |
| CGTGAACGATGTTGTCAAGT+CGG | - | chr8_3:61802711-61802730 | Msa1300270:CDS | 45.0% | |
| !! | CAAGTCGGTGTTGGAAAAAG+TGG | - | chr8_3:61802726-61802745 | Msa1300270:CDS | 45.0% |
| TTTAATGTTGGAGGTAGGCG+TGG | - | chr8_3:61802876-61802895 | Msa1300270:CDS | 45.0% | |
| !! | TAATACTTATTATAAATATA+TGG | + | chr8_3:61800402-61800421 | None:intergenic | 5.0% |
| !!! | TTTTATTTTTTATATTTTCT+AGG | - | chr8_3:61800933-61800952 | Msa1300270:CDS | 5.0% |
| GAGAATCTCTGGCGACAAAG+TGG | + | chr8_3:61800020-61800039 | None:intergenic | 50.0% | |
| CCACTAACGGTCCCAATTGA+AGG | + | chr8_3:61800272-61800291 | None:intergenic | 50.0% | |
| CCTTCAATTGGGACCGTTAG+TGG | - | chr8_3:61800269-61800288 | Msa1300270:intron | 50.0% | |
| CAATTGGGACCGTTAGTGGA+CGG | - | chr8_3:61800273-61800292 | Msa1300270:intron | 50.0% | |
| ACATTCAAACCACGCACGTG+AGG | + | chr8_3:61800485-61800504 | None:intergenic | 50.0% | |
| ! | CGCAAGTGCTGTATTTGCGA+TGG | - | chr8_3:61801009-61801028 | Msa1300270:CDS | 50.0% |
| ACACCGTTCCTGAAGGTGAT+TGG | - | chr8_3:61801109-61801128 | Msa1300270:CDS | 50.0% | |
| TGTCGTACAGGAGATGCCAT+TGG | + | chr8_3:61801273-61801292 | None:intergenic | 50.0% | |
| ! | TGTGGATTGTTGACGGCTTG+CGG | + | chr8_3:61801544-61801563 | None:intergenic | 50.0% |
| TGATTGAGCACGTTGGACTG+TGG | + | chr8_3:61801562-61801581 | None:intergenic | 50.0% | |
| TCTCTAGCACCACTGCATGA+GGG | + | chr8_3:61801714-61801733 | None:intergenic | 50.0% | |
| TTCTCTAGCACCACTGCATG+AGG | + | chr8_3:61801715-61801734 | None:intergenic | 50.0% | |
| CTCCGATGTTGGGAGAGAAA+AGG | - | chr8_3:61801865-61801884 | Msa1300270:intron | 50.0% | |
| ! | GCAAAGTAGGGTCTTGTGTG+AGG | - | chr8_3:61801887-61801906 | Msa1300270:intron | 50.0% |
| GTATGGACCTTACTGGGCAA+TGG | + | chr8_3:61801969-61801988 | None:intergenic | 50.0% | |
| CATTGTGACAGGGAGCTTTG+TGG | + | chr8_3:61802004-61802023 | None:intergenic | 50.0% | |
| CATGCAGTTGTTTGTCACGC+AGG | - | chr8_3:61802505-61802524 | Msa1300270:intron | 50.0% | |
| GCAAGCAGCCAAGATGGTAT+GGG | + | chr8_3:61802566-61802585 | None:intergenic | 50.0% | |
| ATGGCTGCATACTGAGTTCG+AGG | + | chr8_3:61802620-61802639 | None:intergenic | 50.0% | |
| CGATGTTGTCAAGTCGGTGT+TGG | - | chr8_3:61802717-61802736 | Msa1300270:CDS | 50.0% | |
| !! | TTCAGGTTGCCCCTTAGCTT+AGG | - | chr8_3:61802830-61802849 | Msa1300270:CDS | 50.0% |
| ! | TCAGGTTGCCCCTTAGCTTA+GGG | - | chr8_3:61802831-61802850 | Msa1300270:CDS | 50.0% |
| ATTAACAGTGCGGTTGCCTG+AGG | + | chr8_3:61802857-61802876 | None:intergenic | 50.0% | |
| GCAAATTCACGACCACCGTC+TGG | - | chr8_3:61799744-61799763 | Msa1300270:three_prime_UTR | 55.0% | |
| ACAAATTCGGGACCAGACGG+TGG | + | chr8_3:61799759-61799778 | None:intergenic | 55.0% | |
| CCAATCCCACCGTCCACTAA+CGG | + | chr8_3:61800285-61800304 | None:intergenic | 55.0% | |
| !! | GGATTGGTCCCCGGATTAGT+TGG | - | chr8_3:61800298-61800317 | Msa1300270:intron | 55.0% |
| GCACAGGACCAACTAATCCG+GGG | + | chr8_3:61800309-61800328 | None:intergenic | 55.0% | |
| GGCACAGGACCAACTAATCC+GGG | + | chr8_3:61800310-61800329 | None:intergenic | 55.0% | |
| GGGCACAGGACCAACTAATC+CGG | + | chr8_3:61800311-61800330 | None:intergenic | 55.0% | |
| TTGGGCTACACCGTTCCTGA+AGG | - | chr8_3:61801102-61801121 | Msa1300270:CDS | 55.0% | |
| GATAGGGTGAGCAGATCCGA+AGG | - | chr8_3:61801327-61801346 | Msa1300270:CDS | 55.0% | |
| ! | GATGATGGTCCCTCATGCAG+TGG | - | chr8_3:61801702-61801721 | Msa1300270:CDS | 55.0% |
| GGAACGTCCATTGCCCAGTA+AGG | - | chr8_3:61801959-61801978 | Msa1300270:intron | 55.0% | |
| GTAGGTTCAGCACCCTCAAG+TGG | - | chr8_3:61802074-61802093 | Msa1300270:intron | 55.0% | |
| !! | CGCAGGTGTCGAAACCTTCA+AGG | - | chr8_3:61802522-61802541 | Msa1300270:intron | 55.0% |
| GCAAGCCACCCATACCATCT+TGG | - | chr8_3:61802555-61802574 | Msa1300270:intron | 55.0% | |
| AGCAGCCAAGATGGTATGGG+TGG | + | chr8_3:61802563-61802582 | None:intergenic | 55.0% | |
| GGCAAGCAGCCAAGATGGTA+TGG | + | chr8_3:61802567-61802586 | None:intergenic | 55.0% | |
| GGAATGGCAAGCAGCCAAGA+TGG | + | chr8_3:61802572-61802591 | None:intergenic | 55.0% | |
| TGCCTGAGGCCCTAAGCTAA+GGG | + | chr8_3:61802843-61802862 | None:intergenic | 55.0% | |
| TTGCCTGAGGCCCTAAGCTA+AGG | + | chr8_3:61802844-61802863 | None:intergenic | 55.0% | |
| ! | TTGGGACCGTTAGTGGACGG+TGG | - | chr8_3:61800276-61800295 | Msa1300270:intron | 60.0% |
| ! | TGGGACCGTTAGTGGACGGT+GGG | - | chr8_3:61800277-61800296 | Msa1300270:intron | 60.0% |
| ! | CCGTTAGTGGACGGTGGGAT+TGG | - | chr8_3:61800282-61800301 | Msa1300270:intron | 60.0% |
| GGAATTCACTAGCGGGGCAC+AGG | + | chr8_3:61800325-61800344 | None:intergenic | 60.0% | |
| GCACATCCCTGCTCGAGAGA+AGG | - | chr8_3:61800742-61800761 | Msa1300270:CDS | 60.0% | |
| GAGAGGAACAGGCAGCCAAG+TGG | - | chr8_3:61801239-61801258 | Msa1300270:CDS | 60.0% | |
| GAACATTACGCAGGGCACGC+TGG | + | chr8_3:61801374-61801393 | None:intergenic | 60.0% | |
| GCCTGAGGCCCTAAGCTAAG+GGG | + | chr8_3:61802842-61802861 | None:intergenic | 60.0% | |
| !! | TGGACGGTGGGATTGGTCCC+CGG | - | chr8_3:61800289-61800308 | Msa1300270:intron | 65.0% |
| CGCGGACCTTCTCTCGAGCA+GGG | + | chr8_3:61800751-61800770 | None:intergenic | 65.0% | |
| TCGCGGACCTTCTCTCGAGC+AGG | + | chr8_3:61800752-61800771 | None:intergenic | 65.0% | |
| GCACGCTGGACTTCCGACAC+AGG | + | chr8_3:61801360-61801379 | None:intergenic | 65.0% | |
| GCCCCTTAGCTTAGGGCCTC+AGG | - | chr8_3:61802838-61802857 | Msa1300270:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 61799735 | 61803005 | 61799735 | ID=Msa1300270;Name=Msa1300270 |
| chr8_3 | mRNA | 61799735 | 61803005 | 61799735 | ID=Msa1300270-mRNA-1;Parent=Msa1300270;Name=Msa1300270-mRNA-1;_AED=0.00;_eAED=0.00;_QI=75|1|1|1|1|1|3|246|616 |
| chr8_3 | exon | 61799735 | 61800213 | 61799735 | ID=Msa1300270-mRNA-1:exon:18295;Parent=Msa1300270-mRNA-1 |
| chr8_3 | exon | 61800471 | 61801785 | 61800471 | ID=Msa1300270-mRNA-1:exon:18294;Parent=Msa1300270-mRNA-1 |
| chr8_3 | exon | 61802628 | 61803005 | 61802628 | ID=Msa1300270-mRNA-1:exon:18293;Parent=Msa1300270-mRNA-1 |
| chr8_3 | five_prime_UTR | 61802931 | 61803005 | 61802931 | ID=Msa1300270-mRNA-1:five_prime_utr;Parent=Msa1300270-mRNA-1 |
| chr8_3 | CDS | 61802628 | 61802930 | 61802628 | ID=Msa1300270-mRNA-1:cds;Parent=Msa1300270-mRNA-1 |
| chr8_3 | CDS | 61800471 | 61801785 | 61800471 | ID=Msa1300270-mRNA-1:cds;Parent=Msa1300270-mRNA-1 |
| chr8_3 | CDS | 61799981 | 61800213 | 61799981 | ID=Msa1300270-mRNA-1:cds;Parent=Msa1300270-mRNA-1 |
| chr8_3 | three_prime_UTR | 61799735 | 61799980 | 61799735 | ID=Msa1300270-mRNA-1:three_prime_utr;Parent=Msa1300270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
