AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1215440

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1215440 MtrunA17_Chr4g0064471 91.667 456 26 2 1 445 1 455 0.0 813
Msa1215440 MtrunA17_Chr4g0064471 64.186 430 126 2 417 818 44 473 0.0 568
Msa1215440 MtrunA17_Chr4g0064461 89.447 398 18 1 442 815 68 465 0.0 737
Msa1215440 MtrunA17_Chr4g0064461 62.945 421 136 4 47 456 50 461 0.0 542
Msa1215440 MtrunA17_Chr4g0064411 56.848 387 149 5 72 445 66 447 6.71e-153 455
Msa1215440 MtrunA17_Chr4g0064411 53.535 396 153 4 447 815 71 462 5.22e-142 427
Msa1215440 MtrunA17_Chr7g0265461 53.747 387 152 5 450 815 18 398 4.13e-138 415
Msa1215440 MtrunA17_Chr7g0265461 48.756 402 184 5 66 456 4 394 1.43e-129 393
Msa1215440 MtrunA17_Chr7g0265451 48.832 428 177 6 409 815 109 515 6.12e-135 411
Msa1215440 MtrunA17_Chr7g0265451 51.467 375 158 7 83 445 138 500 4.28e-125 385
Msa1215440 MtrunA17_Chr3g0137491 52.473 364 162 4 459 816 34 392 1.06e-129 393
Msa1215440 MtrunA17_Chr3g0137491 47.838 370 175 4 89 456 34 387 2.01e-115 355
Msa1215440 MtrunA17_Chr1g0179651 53.801 342 151 4 475 815 4 339 5.03e-126 381
Msa1215440 MtrunA17_Chr1g0179651 51.039 337 158 4 121 456 5 335 2.75e-114 351
Msa1215440 MtrunA17_Chr3g0131051 47.030 404 193 6 67 456 91 487 2.63e-114 356
Msa1215440 MtrunA17_Chr3g0131051 45.823 395 183 4 446 815 103 491 1.33e-111 349
Msa1215440 MtrunA17_Chr3g0120131 47.044 389 186 4 82 456 96 478 2.07e-113 353
Msa1215440 MtrunA17_Chr3g0120131 46.154 390 175 3 452 812 96 479 2.31e-113 353
Msa1215440 MtrunA17_Chr3g0119721 50.445 337 161 2 476 812 11 341 1.35e-112 347
Msa1215440 MtrunA17_Chr3g0119721 48.810 336 166 2 121 456 11 340 2.30e-107 333
Msa1215440 MtrunA17_Chr7g0265381 41.622 370 193 9 86 445 3 359 3.09e-84 273
Msa1215440 MtrunA17_Chr7g0265381 39.884 346 187 9 474 811 38 370 1.91e-76 253
Msa1215440 MtrunA17_Chr4g0055991 39.788 377 206 7 447 812 167 533 4.94e-84 278
Msa1215440 MtrunA17_Chr4g0055991 40.988 344 182 7 113 445 188 521 3.48e-73 249
Msa1215440 MtrunA17_Chr3g0140131 37.650 417 221 10 59 445 172 579 1.05e-79 268
Msa1215440 MtrunA17_Chr3g0140131 39.769 347 186 9 474 811 258 590 1.94e-74 254
Msa1215440 MtrunA17_Chr1g0146181 39.946 368 202 7 86 445 216 572 5.44e-79 266
Msa1215440 MtrunA17_Chr1g0146181 38.617 347 190 7 474 811 251 583 4.65e-75 255
Msa1215440 MtrunA17_Chr1g0197381 38.617 347 186 7 475 812 217 545 9.67e-79 264
Msa1215440 MtrunA17_Chr1g0197381 39.820 334 174 6 121 445 218 533 2.44e-78 263
Msa1215440 MtrunA17_Chr8g0390121 40.290 345 188 6 474 811 273 606 4.77e-76 259
Msa1215440 MtrunA17_Chr8g0390121 37.037 378 202 8 85 445 237 595 8.91e-75 255
Msa1215440 MtrunA17_Chr3g0140141 41.092 348 188 10 103 445 202 537 2.99e-75 255
Msa1215440 MtrunA17_Chr3g0140141 40.058 347 185 10 474 811 216 548 1.83e-74 253
Msa1215440 MtrunA17_Chr5g0411991 34.897 341 202 6 474 809 84 409 4.25e-69 234
Msa1215440 MtrunA17_Chr5g0411991 35.168 327 192 5 124 445 89 400 2.29e-63 218
Msa1215440 MtrunA17_Chr7g0253441 34.746 354 204 12 475 819 150 485 3.16e-54 195
Msa1215440 MtrunA17_Chr7g0253441 36.443 343 181 12 113 442 145 463 2.75e-51 187
Msa1215440 MtrunA17_Chr5g0421571 36.493 211 117 5 474 682 137 332 2.91e-36 140
Msa1215440 MtrunA17_Chr5g0421571 33.990 203 117 4 124 324 142 329 1.22e-31 126
Msa1215440 MtrunA17_Chr8g0385651 27.077 325 192 10 520 806 67 384 8.40e-26 110
Msa1215440 MtrunA17_Chr8g0385651 23.032 343 229 8 141 449 41 382 1.80e-21 97.8
Msa1215440 MtrunA17_Chr8g0385671 27.077 325 192 10 520 806 67 384 1.98e-25 110
Msa1215440 MtrunA17_Chr8g0385671 24.038 312 204 7 141 420 41 351 2.20e-21 97.8
Msa1215440 MtrunA17_Chr5g0436111 26.705 352 151 13 475 814 44 300 4.15e-25 106
Msa1215440 MtrunA17_Chr5g0436111 27.273 165 94 5 121 284 45 184 1.37e-12 69.7
Msa1215440 MtrunA17_Chr2g0320251 26.331 338 192 14 123 425 83 398 8.33e-24 105
Msa1215440 MtrunA17_Chr2g0320251 26.667 360 217 14 478 806 83 426 1.30e-22 101
Msa1215440 MtrunA17_Chr4g0028201 26.820 261 171 5 566 806 184 444 4.92e-22 100
Msa1215440 MtrunA17_Chr4g0028201 25.135 370 233 11 118 462 96 446 2.25e-20 95.1
Msa1215440 MtrunA17_Chr3g0092341 28.179 291 175 11 170 442 187 461 5.68e-20 94.4
Msa1215440 MtrunA17_Chr3g0092341 25.000 328 213 11 500 806 155 470 3.63e-17 85.5
Msa1215440 MtrunA17_Chr6g0460631 27.778 324 208 12 500 806 151 465 9.23e-19 90.5
Msa1215440 MtrunA17_Chr6g0460631 27.852 298 174 11 166 442 179 456 4.94e-17 85.1
Msa1215440 MtrunA17_Chr1g0200871 27.296 392 233 15 90 445 59 434 2.57e-18 89.0
Msa1215440 MtrunA17_Chr8g0377331 25.378 331 200 12 502 806 89 398 1.23e-17 86.3
Msa1215440 MtrunA17_Chr8g0377331 26.452 310 187 14 151 439 97 386 9.19e-13 71.2
Msa1215440 MtrunA17_Chr3g0122631 26.384 307 179 14 525 806 116 400 2.58e-17 85.5
Msa1215440 MtrunA17_Chr3g0122631 26.400 250 152 9 209 439 152 388 4.73e-12 68.9
Msa1215440 MtrunA17_Chr4g0039811 24.671 304 185 9 160 441 169 450 4.24e-17 85.5
Msa1215440 MtrunA17_Chr4g0039811 23.377 308 210 7 521 815 175 469 3.59e-14 76.3
Msa1215440 MtrunA17_Chr1g0159421 25.291 344 219 13 485 803 75 405 2.40e-16 82.4
Msa1215440 MtrunA17_Chr1g0159421 24.419 344 208 12 129 440 74 397 6.20e-13 72.0
Msa1215440 MtrunA17_Chr4g0043801 23.875 289 184 12 170 437 160 433 4.67e-15 79.0
Msa1215440 MtrunA17_Chr4g0043801 24.138 290 182 13 525 792 160 433 7.84e-13 71.6
Msa1215440 MtrunA17_Chr7g0254391 28.028 289 177 11 170 442 188 461 1.83e-14 77.0
Msa1215440 MtrunA17_Chr7g0254391 28.276 290 179 11 532 806 195 470 4.83e-14 75.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1215440 AT3G42180.1 63.689 347 123 1 113 456 118 464 4.23e-160 474
Msa1215440 AT3G42180.1 60.377 371 143 2 448 815 99 468 1.89e-158 470
Msa1215440 AT5G33290.1 64.244 344 120 1 475 815 155 498 3.15e-159 473
Msa1215440 AT5G33290.1 58.311 379 154 2 81 456 117 494 8.97e-157 467
Msa1215440 AT3G42180.4 64.478 335 116 1 125 456 1 335 1.22e-157 463
Msa1215440 AT3G42180.4 63.422 339 121 1 480 815 1 339 1.70e-155 457
Msa1215440 AT5G20260.2 58.182 385 132 4 456 815 85 465 3.93e-157 466
Msa1215440 AT5G20260.2 58.108 370 137 5 86 443 85 448 3.93e-157 466
Msa1215440 AT5G20260.3 61.561 346 128 3 471 815 19 360 2.42e-154 455
Msa1215440 AT5G20260.3 61.728 324 119 3 121 443 24 343 4.04e-150 444
Msa1215440 AT5G11130.1 54.962 393 144 3 455 818 91 479 3.27e-152 454
Msa1215440 AT5G11130.1 53.109 386 163 4 85 456 91 472 7.13e-145 436
Msa1215440 AT5G20260.1 62.315 337 122 3 480 815 1 333 3.22e-151 446
Msa1215440 AT5G20260.1 61.562 320 118 3 125 443 1 316 1.69e-147 437
Msa1215440 AT5G11130.2 59.587 339 133 2 480 818 1 335 5.28e-149 441
Msa1215440 AT5G11130.2 56.024 332 142 2 125 456 1 328 8.42e-140 417
Msa1215440 AT5G03795.1 51.151 391 164 4 446 815 131 515 4.54e-136 414
Msa1215440 AT5G03795.1 50.400 375 174 4 77 445 132 500 5.41e-126 388
Msa1215440 AT5G25310.1 47.013 385 173 5 456 815 101 479 5.49e-119 369
Msa1215440 AT5G25310.1 41.336 479 243 10 6 461 17 480 1.51e-111 349
Msa1215440 AT3G07620.1 49.123 342 169 2 475 816 123 459 1.51e-114 356
Msa1215440 AT3G07620.1 46.216 370 182 4 85 442 76 440 1.18e-111 348
Msa1215440 AT4G16745.1 42.120 349 183 7 474 812 190 529 1.52e-89 293
Msa1215440 AT4G16745.1 38.243 387 212 7 77 445 140 517 2.12e-83 277
Msa1215440 AT4G16745.2 37.019 416 218 9 77 471 140 532 5.66e-83 277
Msa1215440 AT4G16745.2 40.327 367 187 10 474 818 190 546 5.89e-82 274
Msa1215440 AT5G19670.1 41.124 338 185 6 113 445 265 593 7.72e-81 272
Msa1215440 AT5G19670.1 38.329 347 192 7 474 811 271 604 1.18e-75 258
Msa1215440 AT5G19670.2 41.124 338 185 6 113 445 265 593 7.72e-81 272
Msa1215440 AT5G19670.2 38.329 347 192 7 474 811 271 604 1.18e-75 258
Msa1215440 AT4G32790.1 40.346 347 185 8 474 811 257 590 2.76e-80 270
Msa1215440 AT4G32790.1 40.964 332 182 8 119 445 257 579 1.43e-74 254
Msa1215440 AT4G32790.3 40.346 347 185 8 474 811 257 590 2.76e-80 270
Msa1215440 AT4G32790.3 40.964 332 182 8 119 445 257 579 1.43e-74 254
Msa1215440 AT4G32790.2 40.346 347 185 8 474 811 257 590 2.76e-80 270
Msa1215440 AT4G32790.2 40.964 332 182 8 119 445 257 579 1.43e-74 254
Msa1215440 AT5G25820.1 41.311 351 178 10 474 811 314 649 2.12e-75 258
Msa1215440 AT5G25820.1 40.870 345 178 10 113 445 308 638 3.87e-74 255
Msa1215440 AT5G11610.1 37.709 358 201 7 85 433 174 518 2.99e-71 244
Msa1215440 AT5G11610.1 38.810 353 181 10 474 811 210 542 6.13e-68 235
Msa1215440 AT5G37000.1 36.571 350 193 7 475 812 217 549 4.86e-70 241
Msa1215440 AT5G37000.1 37.576 330 183 6 125 445 222 537 2.87e-68 236
Msa1215440 AT4G38040.1 36.364 341 197 6 474 809 94 419 5.32e-69 234
Msa1215440 AT4G38040.1 35.843 332 193 5 119 445 94 410 2.17e-63 219
Msa1215440 AT4G38040.2 34.700 317 187 5 119 430 94 395 1.25e-58 206
Msa1215440 AT4G38040.2 34.700 317 187 6 474 785 94 395 3.74e-58 204
Msa1215440 AT5G11610.2 34.722 288 166 7 85 363 174 448 6.92e-46 171
Msa1215440 AT5G11610.2 35.659 258 134 8 474 718 210 448 3.38e-39 152
Msa1215440 AT1G27440.1 27.950 322 193 10 520 806 63 380 4.21e-27 115
Msa1215440 AT1G27440.1 24.668 377 237 13 106 449 16 378 1.90e-24 107
Msa1215440 AT5G61840.1 27.855 359 205 13 481 806 46 383 1.31e-25 110
Msa1215440 AT5G61840.1 25.714 350 220 10 126 449 46 381 2.22e-24 107
Msa1215440 AT2G28110.1 23.457 405 257 13 69 442 42 424 8.11e-24 105
Msa1215440 AT2G28110.1 24.057 424 250 14 422 806 43 433 1.29e-21 99.4
Msa1215440 AT5G11610.3 33.333 162 98 4 85 242 174 329 7.64e-23 101
Msa1215440 AT5G11610.3 34.884 129 70 4 474 597 210 329 3.35e-17 84.3
Msa1215440 AT5G22940.1 26.909 275 168 8 566 814 187 454 1.11e-20 96.7
Msa1215440 AT5G22940.1 24.172 302 195 11 165 442 147 438 9.04e-18 87.8
Msa1215440 AT5G22940.2 26.909 275 168 8 566 814 216 483 1.32e-20 96.7
Msa1215440 AT5G22940.2 24.172 302 195 11 165 442 176 467 1.07e-17 87.4
Msa1215440 AT1G67410.1 28.819 288 167 10 174 439 123 394 2.17e-20 95.5
Msa1215440 AT1G67410.1 28.333 300 177 10 529 806 123 406 2.57e-20 95.1
Msa1215440 AT1G74680.1 27.113 284 191 6 532 806 156 432 1.47e-17 87.0
Msa1215440 AT1G74680.1 28.223 287 186 9 167 442 146 423 4.32e-17 85.5
Msa1215440 AT5G16890.1 25.146 342 198 13 133 441 140 456 1.52e-17 87.0
Msa1215440 AT5G16890.1 25.212 353 209 13 479 796 124 456 7.91e-16 81.6
Msa1215440 AT2G35100.1 24.324 296 189 10 515 792 117 395 3.43e-16 82.4
Msa1215440 AT2G35100.1 22.526 293 198 9 160 437 117 395 5.20e-16 82.0
Msa1215440 AT1G21480.2 24.000 350 222 14 459 780 68 401 4.13e-16 82.0
Msa1215440 AT1G21480.2 25.714 315 179 13 120 403 84 374 6.82e-15 78.2
Msa1215440 AT1G21480.1 23.577 369 242 14 459 803 68 420 1.03e-15 81.3
Msa1215440 AT1G21480.1 25.212 353 208 13 120 440 84 412 2.75e-15 79.7
Msa1215440 AT3G03650.1 25.000 320 203 9 143 439 158 463 3.80e-15 79.7
Msa1215440 AT3G03650.1 24.765 319 205 10 498 794 158 463 4.31e-14 76.3
Msa1215440 AT3G45400.1 28.390 236 154 8 581 806 206 436 1.94e-14 77.4
Msa1215440 AT3G45400.1 28.521 284 172 11 175 442 159 427 9.28e-14 75.1
Msa1215440 AT5G44930.2 26.708 322 195 14 174 483 130 422 1.51e-13 74.3
Msa1215440 AT5G44930.2 26.160 237 130 9 580 790 175 392 3.92e-11 66.6
Msa1215440 AT5G44930.1 26.708 322 195 14 174 483 130 422 1.51e-13 74.3
Msa1215440 AT5G44930.1 26.160 237 130 9 580 790 175 392 3.92e-11 66.6
Msa1215440 AT3G57630.2 25.397 315 180 8 525 787 405 716 6.25e-13 73.2
Msa1215440 AT3G57630.3 25.397 315 180 8 525 787 407 718 6.53e-13 73.2
Msa1215440 AT3G57630.1 25.397 315 180 8 525 787 407 718 6.53e-13 73.2
Msa1215440 AT1G34270.1 28.716 296 174 13 175 445 144 427 1.61e-12 71.2
Msa1215440 AT5G44930.3 26.866 268 165 11 174 427 130 380 3.50e-12 69.7

Find 163 sgRNAs with CRISPR-Local

Find 350 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAATGCTACTGTTTGCTTTA+TGG 0.100371 8_1:+76701096 None:intergenic
GCTAAGATTGTTCGGTTATT+AGG 0.113139 8_1:+76695750 None:intergenic
GGATTTGCATCTGAGATTTC+TGG 0.154159 8_1:+76699333 None:intergenic
ATCAATGAATTGACCTTCTA+TGG 0.170506 8_1:+76696283 None:intergenic
TAGCATAAAGAGCCCCTTTA+AGG 0.188086 8_1:-76700326 Msa1215440:CDS
ATGGAATATTTGTTGTTTAC+AGG 0.206569 8_1:+76696302 None:intergenic
CTGAAGGGTTCCAGCCTAAA+AGG 0.211097 8_1:-76699263 Msa1215440:CDS
TCAAAACTATACACAATTAA+TGG 0.213424 8_1:-76699049 Msa1215440:CDS
TGTAAAATAGTCTTAATTTC+TGG 0.218912 8_1:+76695429 None:intergenic
TTGCTGATAAGTATCCTTAT+TGG 0.220100 8_1:-76700159 Msa1215440:CDS
TTAATTGCTTCCACAATTCT+TGG 0.224629 8_1:+76698979 None:intergenic
ACTAGGGTGCTTAGCCTTAA+AGG 0.225671 8_1:+76700312 None:intergenic
ACCACATTTGCAACACTAAA+AGG 0.233973 8_1:+76700268 None:intergenic
TATCTCTTCACTTCTCAAAA+AGG 0.261530 8_1:-76701242 Msa1215440:CDS
AGTCAATTCTCCATGGAAAT+TGG 0.270904 8_1:-76695465 Msa1215440:CDS
AAAGTTAGGCCCACCAAATC+TGG 0.280032 8_1:-76699205 Msa1215440:CDS
TAAGCCAATTATGTCCAAAA+AGG 0.281177 8_1:-76700233 Msa1215440:CDS
TTCTCCTCTCTTGTCATGAC+TGG 0.282575 8_1:-76700111 Msa1215440:CDS
TGGTGAAGAGATTGAAGATA+TGG 0.283644 8_1:-76700441 Msa1215440:CDS
CTAAGATTGTTCGGTTATTA+GGG 0.296027 8_1:+76695751 None:intergenic
TCTTCCTTTCAGTGTGTCTA+AGG 0.305484 8_1:-76696195 Msa1215440:CDS
TTCTGCTTTCATGCCATGAT+TGG 0.310677 8_1:-76696034 Msa1215440:CDS
TAATCTGATCTAGACCTTCT+AGG 0.312051 8_1:+76696152 None:intergenic
AAGAAAACATGGGCCAATTC+AGG 0.312175 8_1:+76696218 None:intergenic
GAGAAAGAATATGACTAGTT+TGG 0.322408 8_1:-76696705 Msa1215440:CDS
TTGCAAACAAGTATCCTTAC+TGG 0.323012 8_1:-76696082 Msa1215440:CDS
TTTGTATAATCTTGACCTTT+TGG 0.324099 8_1:+76695633 None:intergenic
ATGAAGTACTTGAAGAGTTT+AGG 0.325716 8_1:+76695888 None:intergenic
GCTAATGTGGTTCTGTTTGA+TGG 0.329668 8_1:+76699174 None:intergenic
TAAAGCAAACAGTAGCATTA+AGG 0.331229 8_1:-76701093 Msa1215440:intron
TTAGGGTGTTGGTCCGTATT+AGG 0.344378 8_1:+76695768 None:intergenic
ATATGATACTTCACTCTGTT+TGG 0.352586 8_1:-76695305 Msa1215440:CDS
CCATTACTTCTATTCCAATA+AGG 0.353414 8_1:+76700145 None:intergenic
ATCAAATCAAATGGCTTTGC+TGG 0.355073 8_1:+76695330 None:intergenic
GAAAATTGTTACTAAATCAT+TGG 0.357368 8_1:-76699119 Msa1215440:CDS
GGATAGAGTTGAAGAAAGTT+TGG 0.364095 8_1:-76700954 Msa1215440:CDS
CAATTAAGCACATCACTAAA+AGG 0.364678 8_1:+76695489 None:intergenic
CCAACTGGTAAGTACACTTC+AGG 0.370355 8_1:+76699228 None:intergenic
CAAAACTATACACAATTAAT+GGG 0.375555 8_1:-76699048 Msa1215440:CDS
AACTCTTCAAGTACTTCATC+AGG 0.375868 8_1:-76695884 Msa1215440:CDS
GATGGGCTTTGGCCCAGATT+TGG 0.381038 8_1:+76699192 None:intergenic
TTCGAGAAGCAATTCTTTCA+AGG 0.382330 8_1:-76700913 Msa1215440:CDS
AACAACAAATATTCCATAGA+AGG 0.388076 8_1:-76696296 Msa1215440:CDS
TGGTTCTGTTTGATGGGCTT+TGG 0.388867 8_1:+76699181 None:intergenic
TAAATTGCTTCCACCACTCT+TGG 0.394443 8_1:+76695555 None:intergenic
CTAGGGTGCTTAGCCTTAAA+GGG 0.394806 8_1:+76700313 None:intergenic
CTTTCAATGATGTGTTGAAT+TGG 0.396648 8_1:-76698912 Msa1215440:CDS
GGCTTTGGCCCAGATTTGGT+GGG 0.396783 8_1:+76699196 None:intergenic
TTCTGTAGATGGACCCTCTT+GGG 0.399902 8_1:+76700852 None:intergenic
CAAGGCAACTCATCCTGAAT+TGG 0.402788 8_1:-76696231 Msa1215440:CDS
AATGGTCCATCATGTACTAT+TGG 0.409324 8_1:+76700397 None:intergenic
CATGGCATGAAAGCAGAAAA+TGG 0.410042 8_1:+76696039 None:intergenic
TGGTGAAGAGATTCAAGGTA+TGG 0.410347 8_1:-76696364 Msa1215440:CDS
TATTACAGAAACAAAGTATA+GGG 0.414924 8_1:-76695403 Msa1215440:CDS
TCAGGATGAGTTGCCTTGAA+TGG 0.417478 8_1:+76696236 None:intergenic
GGGCTTTGGCCCAGATTTGG+TGG 0.426206 8_1:+76699195 None:intergenic
ATTGCATATATGTTGTTCAA+TGG 0.428434 8_1:+76700379 None:intergenic
AATTTGCCTGTTGGAAAGCT+TGG 0.429513 8_1:-76695795 Msa1215440:CDS
CATGACAAGAGAGGAGAAAA+TGG 0.431578 8_1:+76700116 None:intergenic
TCAAGATTATACAAAGTTGA+TGG 0.431813 8_1:-76695625 Msa1215440:CDS
TCTGCTTTCATGCCATGATT+GGG 0.454591 8_1:-76696033 Msa1215440:intron
ATATTACAGAAACAAAGTAT+AGG 0.455175 8_1:-76695404 Msa1215440:CDS
AAGAATTGCTTCTCGAATTG+AGG 0.456346 8_1:+76700919 None:intergenic
TACTTACCAGTTGGAAAGTT+AGG 0.456933 8_1:-76699219 Msa1215440:CDS
AAAGCTTGGCCCACCTAATA+CGG 0.457453 8_1:-76695781 Msa1215440:CDS
ATCATATGTATCAAATCAAA+TGG 0.460833 8_1:+76695321 None:intergenic
GCTATGTTTACAAGCCTAGA+AGG 0.461991 8_1:-76696166 Msa1215440:CDS
CTAATGTGGTTCTGTTTGAT+GGG 0.466560 8_1:+76699175 None:intergenic
TTTCTGTAGATGGACCCTCT+TGG 0.471285 8_1:+76700851 None:intergenic
CTTGCCACTTCATGTCCACT+AGG 0.472231 8_1:+76695579 None:intergenic
ATCATGTGCATCACATCAAA+AGG 0.472300 8_1:+76698745 None:intergenic
GCAGAAAATTATGACTAGCT+TGG 0.478762 8_1:-76700975 Msa1215440:intron
GGTGGGCCTAACTTTCCAAC+TGG 0.479077 8_1:+76699213 None:intergenic
CCTCAGTTGAATTTGCCTGT+TGG 0.479114 8_1:-76695804 Msa1215440:CDS
AACAACATATATGCAATTGA+AGG 0.484931 8_1:-76700373 Msa1215440:CDS
TGCAATGCAAACACTTCTGA+AGG 0.485857 8_1:-76699279 Msa1215440:CDS
GGAATTACAGTACTACTTCA+AGG 0.486167 8_1:-76700892 Msa1215440:CDS
TCTCCTCTCTTGTCATGACT+GGG 0.487831 8_1:-76700110 Msa1215440:intron
CCTTGACTTCTGTTCCAGTA+AGG 0.489828 8_1:+76696068 None:intergenic
GGATTAGCATAAGAAACTCT+TGG 0.489867 8_1:+76695909 None:intergenic
GGTGGGCCAAGCTTTCCAAC+AGG 0.495256 8_1:+76695789 None:intergenic
CATTGATTCAGAAAGCAATT+CGG 0.499790 8_1:-76696649 Msa1215440:CDS
AGTTTGGAGAGGATTGAAGA+AGG 0.501327 8_1:-76696689 Msa1215440:CDS
ATCACATCAAAAGGCTTAGC+AGG 0.501383 8_1:+76698754 None:intergenic
GGGATGGACACATCTCTGTT+AGG 0.505237 8_1:+76695825 None:intergenic
GGGTGTTGGTCCGTATTAGG+TGG 0.506106 8_1:+76695771 None:intergenic
TGAAGGGTTCCAGCCTAAAA+GGG 0.509729 8_1:-76699262 Msa1215440:CDS
AAGTAACAAGAGTCCATTCA+AGG 0.512022 8_1:-76696249 Msa1215440:CDS
ATGGGCCCCACCAGAAAAGA+AGG 0.516521 8_1:+76699152 None:intergenic
CAACTGGTAAGTACACTTCA+GGG 0.516975 8_1:+76699229 None:intergenic
GTGGTGGAAGCAATTTATGC+AGG 0.521001 8_1:-76695549 Msa1215440:CDS
TCTATCAACTCCAATTTCCA+TGG 0.521840 8_1:+76695455 None:intergenic
GGTGAAGAGATTGAAGATAT+GGG 0.523274 8_1:-76700440 Msa1215440:CDS
AAGATATGGGTATACAAAGA+AGG 0.523825 8_1:-76700427 Msa1215440:CDS
TTTATGCTAGGAAGAGAGAA+AGG 0.525025 8_1:+76701194 None:intergenic
GAGAAGTGAAGAGATAAGTG+AGG 0.525419 8_1:+76701249 None:intergenic
TGCAATGCCAACACCTCAGA+AGG 0.539598 8_1:-76695855 Msa1215440:CDS
GTTCATGAGTACCTTCCAAA+AGG 0.540735 8_1:-76695648 Msa1215440:CDS
ATTGTGAACCTACCCAATCA+TGG 0.544637 8_1:+76696021 None:intergenic
GGAGATGGTGAAGAGATTCA+AGG 0.550146 8_1:-76696369 Msa1215440:CDS
CTAGCCACTTCATATCCACT+TGG 0.551352 8_1:+76699003 None:intergenic
TTGTTCGGTTATTAGGGTGT+TGG 0.552565 8_1:+76695757 None:intergenic
CCTTATTGGAATAGAAGTAA+TGG 0.555785 8_1:-76700145 Msa1215440:CDS
ATTGTTACTAAATCATTGGA+AGG 0.556809 8_1:-76699115 Msa1215440:CDS
ATTCAAGGTATGGGTATACA+AGG 0.558498 8_1:-76696354 Msa1215440:CDS
ATTGTGGAAGCAATTAATGC+TGG 0.559680 8_1:-76698973 Msa1215440:CDS
GTTCATGAGTATCTTCCAAA+GGG 0.560213 8_1:-76699072 Msa1215440:CDS
AAGTTAGGCCCACCAAATCT+GGG 0.562454 8_1:-76699204 Msa1215440:CDS
AGTTCATGAGTATCTTCCAA+AGG 0.571921 8_1:-76699073 Msa1215440:CDS
GGTGAAGAGATTCAAGGTAT+GGG 0.573087 8_1:-76696363 Msa1215440:CDS
GAGCAACCATTGGTACATGA+TGG 0.574458 8_1:-76696326 Msa1215440:CDS
AATCAGGAGCCACATGGAGA+TGG 0.574643 8_1:-76700461 Msa1215440:intron
ACAGGTCCATCATGTACCAA+TGG 0.576004 8_1:+76696320 None:intergenic
AAGCAGGAGCCACATGGAGA+TGG 0.576054 8_1:-76696384 Msa1215440:intron
CAACAGGCAAATTCAACTGA+GGG 0.577993 8_1:+76695805 None:intergenic
CAAGATTATACAAAGTTGAT+GGG 0.579273 8_1:-76695624 Msa1215440:CDS
CCTGAAGTGTACTTACCAGT+TGG 0.580840 8_1:-76699228 Msa1215440:CDS
AGAATATGACTAGTTTGGAG+AGG 0.583515 8_1:-76696700 Msa1215440:CDS
TAATTGGAGTCAATTCTCCA+TGG 0.589312 8_1:-76695472 Msa1215440:CDS
CAACACATCATTGAAAGGCA+AGG 0.592964 8_1:+76698918 None:intergenic
ACCAGAAAAGAAGGCTAATG+TGG 0.593736 8_1:+76699161 None:intergenic
CCGTGACAGACTTCATAGAA+TGG 0.594603 8_1:-76700203 Msa1215440:CDS
CCCCTAAAGCAGGAGCCACA+TGG 0.595531 8_1:-76696390 Msa1215440:intron
CAATTCAACACATCATTGAA+AGG 0.595885 8_1:+76698913 None:intergenic
TGAAAGGAAGAAAGAAAACA+TGG 0.600510 8_1:+76696207 None:intergenic
GGTGTTGGTCCGTATTAGGT+GGG 0.600847 8_1:+76695772 None:intergenic
CAGACTTCATAGAATGGTGG+AGG 0.601253 8_1:-76700197 Msa1215440:CDS
AAAATATGTGTGCCTCACTA+GGG 0.603230 8_1:+76700296 None:intergenic
AGTGGCTAGTCCAAGAATTG+TGG 0.603331 8_1:-76698989 Msa1215440:CDS
TAATTGTCACAAATTATCAC+TGG 0.605632 8_1:+76695519 None:intergenic
GAAACATCGTAAAGCCTCCA+TGG 0.606559 8_1:+76701304 None:intergenic
AAAGTTGCTCAAGAGTTGGA+AGG 0.607979 8_1:-76695691 Msa1215440:CDS
AAGGTATGGGTATACAAGGA+AGG 0.608922 8_1:-76696350 Msa1215440:CDS
GAGCAACCAATAGTACATGA+TGG 0.611429 8_1:-76700403 Msa1215440:CDS
GATCAGATTATGATCCTCAT+CGG 0.612394 8_1:-76696139 Msa1215440:CDS
GCTCAAGAGTTGGAAGGACA+AGG 0.614766 8_1:-76695685 Msa1215440:CDS
AGGCAAATTCAACTGAGGGA+TGG 0.618149 8_1:+76695809 None:intergenic
CCTTACTGGAACAGAAGTCA+AGG 0.623942 8_1:-76696068 Msa1215440:CDS
TAATTCTGAGAAATAATCAC+AGG 0.625097 8_1:+76698943 None:intergenic
TGAAGTGGCAAGTCCAAGAG+TGG 0.628625 8_1:-76695568 Msa1215440:CDS
ATCTCTTCACCATCTCCATG+TGG 0.632190 8_1:+76700452 None:intergenic
CAAGGAAGGAGAGCAACCAT+TGG 0.632800 8_1:-76696336 Msa1215440:CDS
TATGAAAATCAGGAGCCACA+TGG 0.634197 8_1:-76700467 Msa1215440:intron
CCATTCTATGAAGTCTGTCA+CGG 0.635986 8_1:+76700203 None:intergenic
GCAATGCAAACACTTCTGAA+GGG 0.639377 8_1:-76699278 Msa1215440:CDS
TAAGGCTAAGCACCCTAGTG+AGG 0.639574 8_1:-76700308 Msa1215440:CDS
CATTTGCAACACTAAAAGGA+AGG 0.639783 8_1:+76700272 None:intergenic
ATCTCTTCACCATCTCCATG+TGG 0.641124 8_1:+76696375 None:intergenic
CCAACAGGCAAATTCAACTG+AGG 0.641348 8_1:+76695804 None:intergenic
AGTGGCAAGTCCAAGAGTGG+TGG 0.644424 8_1:-76695565 Msa1215440:CDS
TTGCCACTTCATGTCCACTA+GGG 0.651832 8_1:+76695580 None:intergenic
GTGCCCTAGTGGACATGAAG+TGG 0.657996 8_1:-76695583 Msa1215440:CDS
TAGGGTGCTTAGCCTTAAAG+GGG 0.661969 8_1:+76700314 None:intergenic
ACTCTTCAAGTACTTCATCA+GGG 0.662235 8_1:-76695883 Msa1215440:CDS
ATGACCTTAGACACACTGAA+AGG 0.663561 8_1:+76696191 None:intergenic
ACTAAAAGCTGTAACCGATG+AGG 0.669918 8_1:+76696125 None:intergenic
TTGTGGAAGCAATTAATGCT+GGG 0.670500 8_1:-76698972 Msa1215440:CDS
TTATAAGTCAGAAACTGATG+AGG 0.671606 8_1:+76701140 None:intergenic
GTGTCCAAGTGGATATGAAG+TGG 0.679823 8_1:-76699007 Msa1215440:CDS
GAAAGGAAGAAAGAAAACAT+GGG 0.682085 8_1:+76696208 None:intergenic
TGACAGACTTCATAGAATGG+TGG 0.684701 8_1:-76700200 Msa1215440:CDS
TTACCCAGTCATGACAAGAG+AGG 0.688491 8_1:+76700107 None:intergenic
ATTACAGTACTACTTCAAGG+AGG 0.793495 8_1:-76700889 Msa1215440:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTCTAATGATAATAATAAT+TGG + chr8_1:76696047-76696066 None:intergenic 10.0%
!! GCAAAATAAAATAAAAAATA+GGG + chr8_1:76696939-76696958 None:intergenic 10.0%
!! AGCAAAATAAAATAAAAAAT+AGG + chr8_1:76696940-76696959 None:intergenic 10.0%
!!! TTTAACTTATATATTAATAC+GGG + chr8_1:76698380-76698399 None:intergenic 10.0%
!!! CTTTAACTTATATATTAATA+CGG + chr8_1:76698381-76698400 None:intergenic 10.0%
!! ATGTAAGAATTAAAAAAAAT+AGG - chr8_1:76698410-76698429 Msa1215440:intron 10.0%
!! ATAAGATAAGATTATTTATT+TGG - chr8_1:76699181-76699200 Msa1215440:CDS 10.0%
!!! ATTTTTATAGTAATTTAAGT+AGG + chr8_1:76700147-76700166 None:intergenic 10.0%
!! ATGAAATAGAAACTTTAATT+TGG + chr8_1:76695564-76695583 None:intergenic 15.0%
!! ATAATAATAATTGGTTATCA+AGG + chr8_1:76696038-76696057 None:intergenic 15.0%
!!! CATAATTTTAGAAAAAAACA+AGG + chr8_1:76696085-76696104 None:intergenic 15.0%
!!! TTTCTAAAATTATGAAAATC+AGG - chr8_1:76696091-76696110 Msa1215440:CDS 15.0%
!! AAAAAAACAATACTAATTAG+TGG - chr8_1:76696648-76696667 Msa1215440:CDS 15.0%
!!! GTTTTTCTAAAAATACATTA+TGG + chr8_1:76696984-76697003 None:intergenic 15.0%
!!! AAAGCATTTTATTTAAACTT+TGG + chr8_1:76697192-76697211 None:intergenic 15.0%
!! TTAACTTATATATTAATACG+GGG + chr8_1:76698379-76698398 None:intergenic 15.0%
!!! TTTTACTCATATATTAGTAA+CGG + chr8_1:76698438-76698457 None:intergenic 15.0%
!!! AACTAAAGTTATTTTATACA+TGG - chr8_1:76699443-76699462 Msa1215440:intron 15.0%
!!! TTTATTTTTTGTTTTCAGTT+TGG - chr8_1:76699834-76699853 Msa1215440:intron 15.0%
!!! TATTTTCAAAATGTACATGA+TGG + chr8_1:76696611-76696630 None:intergenic 20.0%
!!! ATTATTGATTGTAGTGAATT+TGG - chr8_1:76696898-76696917 Msa1215440:intron 20.0%
!!! AATGTATTTTTAGAAAAACC+TGG - chr8_1:76696985-76697004 Msa1215440:intron 20.0%
!!! TTTACTTTACTTGATAATTC+AGG - chr8_1:76697210-76697229 Msa1215440:intron 20.0%
!!! GATTTAGTAACAATTTTCTA+AGG + chr8_1:76697447-76697466 None:intergenic 20.0%
!! GAAAATTGTTACTAAATCAT+TGG - chr8_1:76697449-76697468 Msa1215440:intron 20.0%
!! TCAAAACTATACACAATTAA+TGG - chr8_1:76697519-76697538 Msa1215440:intron 20.0%
!! CAAAACTATACACAATTAAT+GGG - chr8_1:76697520-76697539 Msa1215440:intron 20.0%
!!! AAAAGCATTTTGTTATGAAT+AGG - chr8_1:76697791-76697810 Msa1215440:intron 20.0%
!! AATTAACTACTAACATTTGT+CGG + chr8_1:76698003-76698022 None:intergenic 20.0%
!! TTTACTCATATATTAGTAAC+GGG + chr8_1:76698437-76698456 None:intergenic 20.0%
!! TTTAACTCGTATATTAATAC+AGG + chr8_1:76698497-76698516 None:intergenic 20.0%
!! ATAACTCATATCAAATTACA+TGG + chr8_1:76698685-76698704 None:intergenic 20.0%
!! TAATTTGATATGAGTTATCT+TGG - chr8_1:76698687-76698706 Msa1215440:intron 20.0%
!! GTAAACATTATGTATTCAAT+TGG - chr8_1:76698755-76698774 Msa1215440:intron 20.0%
!!! ATTAAGCATCTACTAAATTT+TGG + chr8_1:76698995-76699014 None:intergenic 20.0%
!! CAAACAATGTAACAAATAAA+TGG + chr8_1:76699087-76699106 None:intergenic 20.0%
!!! TAAAGTTATTTTATACATGG+AGG - chr8_1:76699446-76699465 Msa1215440:intron 20.0%
!! AAAATACAAGGAAAAAATTG+AGG + chr8_1:76699577-76699596 None:intergenic 20.0%
!!! ATATTAAAAAGTGCTAAAGA+AGG + chr8_1:76699641-76699660 None:intergenic 20.0%
!!! TTAGCACTTTTTAATATCAA+AGG - chr8_1:76699644-76699663 Msa1215440:intron 20.0%
!! ACAATAATATAAGTCAAACA+TGG - chr8_1:76699744-76699763 Msa1215440:intron 20.0%
!! GTGTTATAATTAAACTTAAC+TGG + chr8_1:76700022-76700041 None:intergenic 20.0%
!!! TGTAAAATAGTCTTAATTTC+TGG + chr8_1:76701142-76701161 None:intergenic 20.0%
!! ATATTACAGAAACAAAGTAT+AGG - chr8_1:76701164-76701183 Msa1215440:CDS 20.0%
!! TATTACAGAAACAAAGTATA+GGG - chr8_1:76701165-76701184 Msa1215440:CDS 20.0%
!! ATCATATGTATCAAATCAAA+TGG + chr8_1:76701250-76701269 None:intergenic 20.0%
!! TTATTCATGTCTTTTATGCT+AGG + chr8_1:76695389-76695408 None:intergenic 25.0%
!!! CAGACAACTTTTTAAAACAT+TGG - chr8_1:76695985-76696004 Msa1215440:intron 25.0%
!!! TTATCAAGGTTTTAAATTGC+AGG + chr8_1:76696024-76696043 None:intergenic 25.0%
! ATTGCATATATGTTGTTCAA+TGG + chr8_1:76696192-76696211 None:intergenic 25.0%
! AACAACATATATGCAATTGA+AGG - chr8_1:76696195-76696214 Msa1215440:CDS 25.0%
!! AAATCCTTTTTGGACATAAT+TGG + chr8_1:76696342-76696361 None:intergenic 25.0%
!! AGTGGAAAAAGTATATACAA+TGG - chr8_1:76696666-76696685 Msa1215440:CDS 25.0%
! TATGTATTGTCGATAAAGAT+CGG - chr8_1:76696722-76696741 Msa1215440:intron 25.0%
! ATTGTTACTAAATCATTGGA+AGG - chr8_1:76697453-76697472 Msa1215440:intron 25.0%
!! TAATTCTGAGAAATAATCAC+AGG + chr8_1:76697628-76697647 None:intergenic 25.0%
! ACATGATACTTCATTCAATT+TGG - chr8_1:76697839-76697858 Msa1215440:intron 25.0%
! CATGGAAATAAATTCAGAAT+AGG + chr8_1:76698667-76698686 None:intergenic 25.0%
! GCAATAGAAATGTTAAGTTA+AGG - chr8_1:76699015-76699034 Msa1215440:CDS 25.0%
! TTTGTTACATTGTTTGCTTA+CGG - chr8_1:76699091-76699110 Msa1215440:CDS 25.0%
!! TCATCATACGTTCTTTTTAT+CGG + chr8_1:76699368-76699387 None:intergenic 25.0%
!! TATAAGTCAAACATGGATTA+AGG - chr8_1:76699751-76699770 Msa1215440:intron 25.0%
!! TATTCAACCTTGATAATCTT+TGG - chr8_1:76699781-76699800 Msa1215440:intron 25.0%
!!! ATGGAATATTTGTTGTTTAC+AGG + chr8_1:76700269-76700288 None:intergenic 25.0%
! AACAACAAATATTCCATAGA+AGG - chr8_1:76700272-76700291 Msa1215440:CDS 25.0%
! CAAAAAAAGCTAAGATTGTT+CGG + chr8_1:76700829-76700848 None:intergenic 25.0%
!! TTTGTATAATCTTGACCTTT+TGG + chr8_1:76700938-76700957 None:intergenic 25.0%
! TCAAGATTATACAAAGTTGA+TGG - chr8_1:76700943-76700962 Msa1215440:CDS 25.0%
!! CAAGATTATACAAAGTTGAT+GGG - chr8_1:76700944-76700963 Msa1215440:CDS 25.0%
! TAATTGTCACAAATTATCAC+TGG + chr8_1:76701052-76701071 None:intergenic 25.0%
TATCTCTTCACTTCTCAAAA+AGG - chr8_1:76695326-76695345 Msa1215440:CDS 30.0%
AGAGAAAGGAAAAACAAAGA+AGG + chr8_1:76695363-76695382 None:intergenic 30.0%
TTATAAGTCAGAAACTGATG+AGG + chr8_1:76695431-76695450 None:intergenic 30.0%
TAATGCTACTGTTTGCTTTA+TGG + chr8_1:76695475-76695494 None:intergenic 30.0%
TAAAGCAAACAGTAGCATTA+AGG - chr8_1:76695475-76695494 Msa1215440:CDS 30.0%
! CTTAACTGATGAAAAGCATA+TGG + chr8_1:76695744-76695763 None:intergenic 30.0%
TGCAGTATATATCAAAGTCT+TGG + chr8_1:76695878-76695897 None:intergenic 30.0%
AAGATATGGGTATACAAAGA+AGG - chr8_1:76696141-76696160 Msa1215440:CDS 30.0%
TAAGCCAATTATGTCCAAAA+AGG - chr8_1:76696335-76696354 Msa1215440:CDS 30.0%
TTGCTGATAAGTATCCTTAT+TGG - chr8_1:76696409-76696428 Msa1215440:intron 30.0%
CCATTACTTCTATTCCAATA+AGG + chr8_1:76696426-76696445 None:intergenic 30.0%
CCTTATTGGAATAGAAGTAA+TGG - chr8_1:76696423-76696442 Msa1215440:intron 30.0%
GTTATATGATCTCTATCCAA+TGG - chr8_1:76696840-76696859 Msa1215440:intron 30.0%
TGTAGTGAATTTGGTTATGA+AGG - chr8_1:76696907-76696926 Msa1215440:intron 30.0%
GTAGTGAATTTGGTTATGAA+GGG - chr8_1:76696908-76696927 Msa1215440:intron 30.0%
!! AAATTTTGTTTGTGTCCAAG+TGG - chr8_1:76697550-76697569 Msa1215440:intron 30.0%
TTAATTGCTTCCACAATTCT+TGG + chr8_1:76697592-76697611 None:intergenic 30.0%
CAATTCAACACATCATTGAA+AGG + chr8_1:76697658-76697677 None:intergenic 30.0%
CTTTCAATGATGTGTTGAAT+TGG - chr8_1:76697656-76697675 Msa1215440:intron 30.0%
ACAAAAGCAAATGATTTCAC+TGG - chr8_1:76698793-76698812 Msa1215440:CDS 30.0%
CAAAAGCAAATGATTTCACT+GGG - chr8_1:76698794-76698813 Msa1215440:CDS 30.0%
TAACAGGTGAAACATTAATC+AGG + chr8_1:76698850-76698869 None:intergenic 30.0%
ACGAATTTCATTCAATCAAC+AGG + chr8_1:76699334-76699353 None:intergenic 30.0%
TAAAAAGAACGTATGATGAG+AGG - chr8_1:76699369-76699388 Msa1215440:intron 30.0%
TACAAGGAAAAAATTGAGGA+AGG + chr8_1:76699573-76699592 None:intergenic 30.0%
TTGAAGGAGTGAAAAATACA+AGG + chr8_1:76699589-76699608 None:intergenic 30.0%
ATCCTATGATCTTCATTTGA+AGG + chr8_1:76699605-76699624 None:intergenic 30.0%
! CACTTTTCCAAAGATTATCA+AGG + chr8_1:76699791-76699810 None:intergenic 30.0%
!! TTTGTTTTCAGTTTGGTCAT+AGG - chr8_1:76699841-76699860 Msa1215440:intron 30.0%
! GAGAAAGAATATGACTAGTT+TGG - chr8_1:76699863-76699882 Msa1215440:intron 30.0%
!! CATTGATTCAGAAAGCAATT+CGG - chr8_1:76699919-76699938 Msa1215440:intron 30.0%
!!! AAACAGAGTTTTGTTCCAAA+AGG - chr8_1:76699966-76699985 Msa1215440:intron 30.0%
!!! AACAGAGTTTTGTTCCAAAA+GGG - chr8_1:76699967-76699986 Msa1215440:intron 30.0%
ATCAATGAATTGACCTTCTA+TGG + chr8_1:76700288-76700307 None:intergenic 30.0%
GAAAGGAAGAAAGAAAACAT+GGG + chr8_1:76700363-76700382 None:intergenic 30.0%
TGAAAGGAAGAAAGAAAACA+TGG + chr8_1:76700364-76700383 None:intergenic 30.0%
GATAATGAAAGCTCAGAAAA+TGG + chr8_1:76700577-76700596 None:intergenic 30.0%
TAAGTCTATGTGATGTGATA+AGG - chr8_1:76700608-76700627 Msa1215440:intron 30.0%
! ATGAAGTACTTGAAGAGTTT+AGG + chr8_1:76700683-76700702 None:intergenic 30.0%
CTAAGATTGTTCGGTTATTA+GGG + chr8_1:76700820-76700839 None:intergenic 30.0%
!!! ACAATCTTAGCTTTTTTTGC+TGG - chr8_1:76700830-76700849 Msa1215440:intron 30.0%
! TATAATCTTGACCTTTTGGA+AGG + chr8_1:76700934-76700953 None:intergenic 30.0%
CAATTAAGCACATCACTAAA+AGG + chr8_1:76701082-76701101 None:intergenic 30.0%
! CTTTTAGTGATGTGCTTAAT+TGG - chr8_1:76701080-76701099 Msa1215440:intron 30.0%
!!! GAAAGCATTTTCAGATGAAT+AGG - chr8_1:76701215-76701234 Msa1215440:CDS 30.0%
ATATGATACTTCACTCTGTT+TGG - chr8_1:76701263-76701282 Msa1215440:CDS 30.0%
! GGCTTAGACGTTTAAATTTT+AGG - chr8_1:76701284-76701303 Msa1215440:CDS 30.0%
TTTATGCTAGGAAGAGAGAA+AGG + chr8_1:76695377-76695396 None:intergenic 35.0%
! GCAGAAAATTATGACTAGCT+TGG - chr8_1:76695593-76695612 Msa1215440:CDS 35.0%
GGATAGAGTTGAAGAAAGTT+TGG - chr8_1:76695614-76695633 Msa1215440:CDS 35.0%
AAGAATTGCTTCTCGAATTG+AGG + chr8_1:76695652-76695671 None:intergenic 35.0%
TTCGAGAAGCAATTCTTTCA+AGG - chr8_1:76695655-76695674 Msa1215440:CDS 35.0%
GGAATTACAGTACTACTTCA+AGG - chr8_1:76695676-76695695 Msa1215440:CDS 35.0%
ATTACAGTACTACTTCAAGG+AGG - chr8_1:76695679-76695698 Msa1215440:CDS 35.0%
AGCATATGGATTTCTGTAGA+TGG + chr8_1:76695730-76695749 None:intergenic 35.0%
TGGTGAAGAGATTGAAGATA+TGG - chr8_1:76696127-76696146 Msa1215440:CDS 35.0%
GGTGAAGAGATTGAAGATAT+GGG - chr8_1:76696128-76696147 Msa1215440:CDS 35.0%
AATGGTCCATCATGTACTAT+TGG + chr8_1:76696174-76696193 None:intergenic 35.0%
AAAATATGTGTGCCTCACTA+GGG + chr8_1:76696275-76696294 None:intergenic 35.0%
AAAAATATGTGTGCCTCACT+AGG + chr8_1:76696276-76696295 None:intergenic 35.0%
CATTTGCAACACTAAAAGGA+AGG + chr8_1:76696299-76696318 None:intergenic 35.0%
! TCCTTTTAGTGTTGCAAATG+TGG - chr8_1:76696299-76696318 Msa1215440:CDS 35.0%
ACCACATTTGCAACACTAAA+AGG + chr8_1:76696303-76696322 None:intergenic 35.0%
! TATAGTTCTTTTCTGACACC+AGG + chr8_1:76697006-76697025 None:intergenic 35.0%
! AAGGCATTTATTCTATCTGC+AGG + chr8_1:76697053-76697072 None:intergenic 35.0%
GATAGAATAAATGCCTTGCT+TGG - chr8_1:76697056-76697075 Msa1215440:intron 35.0%
GAAATATGAATCTCCAAGCA+AGG + chr8_1:76697072-76697091 None:intergenic 35.0%
AGACTAATTGAACTGCAGAA+TGG + chr8_1:76697107-76697126 None:intergenic 35.0%
!! GTGAAGTTTTTGAAGAGGTT+TGG + chr8_1:76697259-76697278 None:intergenic 35.0%
!! CTCTTGTGAAGTTTTTGAAG+AGG + chr8_1:76697264-76697283 None:intergenic 35.0%
TACTTACCAGTTGGAAAGTT+AGG - chr8_1:76697349-76697368 Msa1215440:intron 35.0%
! CTAATGTGGTTCTGTTTGAT+GGG + chr8_1:76697396-76697415 None:intergenic 35.0%
!!! CAATTTTCTAAGGTCACCAT+GGG + chr8_1:76697437-76697456 None:intergenic 35.0%
!!! ACAATTTTCTAAGGTCACCA+TGG + chr8_1:76697438-76697457 None:intergenic 35.0%
AGTTCATGAGTATCTTCCAA+AGG - chr8_1:76697495-76697514 Msa1215440:intron 35.0%
GTTCATGAGTATCTTCCAAA+GGG - chr8_1:76697496-76697515 Msa1215440:intron 35.0%
!!! TGTGTATAGTTTTGACCCTT+TGG + chr8_1:76697514-76697533 None:intergenic 35.0%
ATTGTGGAAGCAATTAATGC+TGG - chr8_1:76697595-76697614 Msa1215440:intron 35.0%
TTGTGGAAGCAATTAATGCT+GGG - chr8_1:76697596-76697615 Msa1215440:intron 35.0%
! GAATTGGAGTGAATTTTCAG+TGG - chr8_1:76697672-76697691 Msa1215440:intron 35.0%
! ATCTCTACTATTTTCTCCAC+TGG + chr8_1:76697703-76697722 None:intergenic 35.0%
ATCATGTGCATCACATCAAA+AGG + chr8_1:76697826-76697845 None:intergenic 35.0%
TATATCCAAACTTGCCTCAA+GGG + chr8_1:76697931-76697950 None:intergenic 35.0%
TAACAGTCCTAATGTAACCA+TGG - chr8_1:76698818-76698837 Msa1215440:CDS 35.0%
AGGACACTAGAAAGATCAAA+GGG + chr8_1:76699553-76699572 None:intergenic 35.0%
AAGGACACTAGAAAGATCAA+AGG + chr8_1:76699554-76699573 None:intergenic 35.0%
CTCCTTCAAATGAAGATCAT+AGG - chr8_1:76699600-76699619 Msa1215440:intron 35.0%
CTCTTTACCTCTTCAAACAA+TGG - chr8_1:76699716-76699735 Msa1215440:intron 35.0%
!! AGAATATGACTAGTTTGGAG+AGG - chr8_1:76699868-76699887 Msa1215440:intron 35.0%
AACAAAACTCTGTTTCATGG+TGG + chr8_1:76699961-76699980 None:intergenic 35.0%
TGGAACAAAACTCTGTTTCA+TGG + chr8_1:76699964-76699983 None:intergenic 35.0%
! TTCAAGTAAATGGACCCTTT+TGG + chr8_1:76699984-76700003 None:intergenic 35.0%
AGCATGTGGATTCAAGTAAA+TGG + chr8_1:76699994-76700013 None:intergenic 35.0%
AATTATGTTTCCCCTAAAGC+AGG - chr8_1:76700168-76700187 Msa1215440:CDS 35.0%
ATTCAAGGTATGGGTATACA+AGG - chr8_1:76700214-76700233 Msa1215440:CDS 35.0%
AAGTAACAAGAGTCCATTCA+AGG - chr8_1:76700319-76700338 Msa1215440:CDS 35.0%
TAATCTGATCTAGACCTTCT+AGG + chr8_1:76700419-76700438 None:intergenic 35.0%
GATCAGATTATGATCCTCAT+CGG - chr8_1:76700429-76700448 Msa1215440:CDS 35.0%
TTGCAAACAAGTATCCTTAC+TGG - chr8_1:76700486-76700505 Msa1215440:intron 35.0%
! GCTCTTTACTTGATGATTCA+GGG - chr8_1:76700635-76700654 Msa1215440:intron 35.0%
! GGATTAGCATAAGAAACTCT+TGG + chr8_1:76700662-76700681 None:intergenic 35.0%
AACTCTTCAAGTACTTCATC+AGG - chr8_1:76700684-76700703 Msa1215440:intron 35.0%
ACTCTTCAAGTACTTCATCA+GGG - chr8_1:76700685-76700704 Msa1215440:intron 35.0%
GCTAAGATTGTTCGGTTATT+AGG + chr8_1:76700821-76700840 None:intergenic 35.0%
!!! ATCTTAGCTTTTTTTGCTGG+TGG - chr8_1:76700833-76700852 Msa1215440:intron 35.0%
!!! TCTTAGCTTTTTTTGCTGGT+GGG - chr8_1:76700834-76700853 Msa1215440:intron 35.0%
GAAAAAAGTTGCTCAAGAGT+TGG - chr8_1:76700873-76700892 Msa1215440:CDS 35.0%
TAATTGGAGTCAATTCTCCA+TGG - chr8_1:76701096-76701115 Msa1215440:CDS 35.0%
AGTCAATTCTCCATGGAAAT+TGG - chr8_1:76701103-76701122 Msa1215440:CDS 35.0%
TCTATCAACTCCAATTTCCA+TGG + chr8_1:76701116-76701135 None:intergenic 35.0%
! ATCAAATCAAATGGCTTTGC+TGG + chr8_1:76701241-76701260 None:intergenic 35.0%
GAGAAGTGAAGAGATAAGTG+AGG + chr8_1:76695322-76695341 None:intergenic 40.0%
!! GTGATGTTTTTGTCCCAAGA+GGG - chr8_1:76695703-76695722 Msa1215440:CDS 40.0%
AGTCTGCAATCACAATTACG+CGG + chr8_1:76695931-76695950 None:intergenic 40.0%
TATGAAAATCAGGAGCCACA+TGG - chr8_1:76696101-76696120 Msa1215440:CDS 40.0%
GAGCAACCAATAGTACATGA+TGG - chr8_1:76696165-76696184 Msa1215440:CDS 40.0%
TAGCATAAAGAGCCCCTTTA+AGG - chr8_1:76696242-76696261 Msa1215440:CDS 40.0%
! GTCACGGTTGAAATCCTTTT+TGG + chr8_1:76696352-76696371 None:intergenic 40.0%
CCATTCTATGAAGTCTGTCA+CGG + chr8_1:76696368-76696387 None:intergenic 40.0%
TGACAGACTTCATAGAATGG+TGG - chr8_1:76696368-76696387 Msa1215440:CDS 40.0%
CATGACAAGAGAGGAGAAAA+TGG + chr8_1:76696455-76696474 None:intergenic 40.0%
AACAAGCTGATCTAAGCCAT+TGG + chr8_1:76696859-76696878 None:intergenic 40.0%
!! AGCTTGTTGCATTGACAGTA+TGG - chr8_1:76696871-76696890 Msa1215440:intron 40.0%
! GGATTTGCATCTGAGATTTC+TGG + chr8_1:76697238-76697257 None:intergenic 40.0%
TGCAATGCAAACACTTCTGA+AGG - chr8_1:76697289-76697308 Msa1215440:intron 40.0%
GCAATGCAAACACTTCTGAA+GGG - chr8_1:76697290-76697309 Msa1215440:intron 40.0%
CAACTGGTAAGTACACTTCA+GGG + chr8_1:76697342-76697361 None:intergenic 40.0%
! GCTAATGTGGTTCTGTTTGA+TGG + chr8_1:76697397-76697416 None:intergenic 40.0%
!!! ACCACATTAGCCTTCTTTTC+TGG - chr8_1:76697406-76697425 Msa1215440:intron 40.0%
ACCAGAAAAGAAGGCTAATG+TGG + chr8_1:76697410-76697429 None:intergenic 40.0%
!!! ACATTAGCCTTCTTTTCTGG+TGG - chr8_1:76697409-76697428 Msa1215440:intron 40.0%
!!! CATTAGCCTTCTTTTCTGGT+GGG - chr8_1:76697410-76697429 Msa1215440:intron 40.0%
!!! ATTAGCCTTCTTTTCTGGTG+GGG - chr8_1:76697411-76697430 Msa1215440:intron 40.0%
CAACACATCATTGAAAGGCA+AGG + chr8_1:76697653-76697672 None:intergenic 40.0%
! ATTTTCAGTGGAGATTCCAG+TGG - chr8_1:76697684-76697703 Msa1215440:intron 40.0%
ATCACATCAAAAGGCTTAGC+AGG + chr8_1:76697817-76697836 None:intergenic 40.0%
CTATATCCAAACTTGCCTCA+AGG + chr8_1:76697932-76697951 None:intergenic 40.0%
TGCTTCCATTCAAGTGTTAC+GGG + chr8_1:76698048-76698067 None:intergenic 40.0%
CTGCTTCCATTCAAGTGTTA+CGG + chr8_1:76698049-76698068 None:intergenic 40.0%
GTAACACTTGAATGGAAGCA+GGG - chr8_1:76698048-76698067 Msa1215440:intron 40.0%
TAACACTTGAATGGAAGCAG+GGG - chr8_1:76698049-76698068 Msa1215440:intron 40.0%
ATCTCGACTCACAATATCAG+TGG - chr8_1:76698075-76698094 Msa1215440:intron 40.0%
TCTCGACTCACAATATCAGT+GGG - chr8_1:76698076-76698095 Msa1215440:intron 40.0%
ACGCTTAACGTTCGTATACA+CGG + chr8_1:76698173-76698192 None:intergenic 40.0%
AATAGGAGTCTTCCATTCAG+GGG + chr8_1:76698650-76698669 None:intergenic 40.0%
GAATAGGAGTCTTCCATTCA+GGG + chr8_1:76698651-76698670 None:intergenic 40.0%
AGAATAGGAGTCTTCCATTC+AGG + chr8_1:76698652-76698671 None:intergenic 40.0%
TCCTAATGTAACCATGGCTA+TGG - chr8_1:76698824-76698843 Msa1215440:CDS 40.0%
! TCACCTGTTAGTTTAGTGAG+TGG - chr8_1:76698860-76698879 Msa1215440:CDS 40.0%
ACGTGAGCATCTATGTAAGT+GGG - chr8_1:76699046-76699065 Msa1215440:CDS 40.0%
! AAAGTGCTAAAGAAGGTGAG+TGG + chr8_1:76699634-76699653 None:intergenic 40.0%
AGTTTGGAGAGGATTGAAGA+AGG - chr8_1:76699879-76699898 Msa1215440:intron 40.0%
CATGGTGGTTGTATACTTCT+TGG + chr8_1:76699946-76699965 None:intergenic 40.0%
! CTTAACTGGTGAAAAGCATG+TGG + chr8_1:76700008-76700027 None:intergenic 40.0%
AGCTGCTTGATATGTGTCAT+TGG - chr8_1:76700103-76700122 Msa1215440:intron 40.0%
! GCTGCTTGATATGTGTCATT+GGG - chr8_1:76700104-76700123 Msa1215440:intron 40.0%
! CTGCTTGATATGTGTCATTG+GGG - chr8_1:76700105-76700124 Msa1215440:intron 40.0%
TGGTGAAGAGATTCAAGGTA+TGG - chr8_1:76700204-76700223 Msa1215440:CDS 40.0%
GGTGAAGAGATTCAAGGTAT+GGG - chr8_1:76700205-76700224 Msa1215440:CDS 40.0%
AAGGTATGGGTATACAAGGA+AGG - chr8_1:76700218-76700237 Msa1215440:CDS 40.0%
AAGAAAACATGGGCCAATTC+AGG + chr8_1:76700353-76700372 None:intergenic 40.0%
TCTTCCTTTCAGTGTGTCTA+AGG - chr8_1:76700373-76700392 Msa1215440:CDS 40.0%
ATGACCTTAGACACACTGAA+AGG + chr8_1:76700380-76700399 None:intergenic 40.0%
GCTATGTTTACAAGCCTAGA+AGG - chr8_1:76700402-76700421 Msa1215440:CDS 40.0%
ACTAAAAGCTGTAACCGATG+AGG + chr8_1:76700446-76700465 None:intergenic 40.0%
!! TCGGTTACAGCTTTTAGTTG+AGG - chr8_1:76700448-76700467 Msa1215440:CDS 40.0%
CATGGCATGAAAGCAGAAAA+TGG + chr8_1:76700532-76700551 None:intergenic 40.0%
TTCTGCTTTCATGCCATGAT+TGG - chr8_1:76700534-76700553 Msa1215440:intron 40.0%
TCTGCTTTCATGCCATGATT+GGG - chr8_1:76700535-76700554 Msa1215440:intron 40.0%
ATTGTGAACCTACCCAATCA+TGG + chr8_1:76700550-76700569 None:intergenic 40.0%
! CGCTCTTTACTTGATGATTC+AGG - chr8_1:76700634-76700653 Msa1215440:intron 40.0%
!! CAAAAATCCTTCTGAGGTGT+TGG + chr8_1:76700723-76700742 None:intergenic 40.0%
GTTAGGCAAAAATCCTTCTG+AGG + chr8_1:76700729-76700748 None:intergenic 40.0%
CAACAGGCAAATTCAACTGA+GGG + chr8_1:76700766-76700785 None:intergenic 40.0%
AATTTGCCTGTTGGAAAGCT+TGG - chr8_1:76700773-76700792 Msa1215440:intron 40.0%
TTGTTCGGTTATTAGGGTGT+TGG + chr8_1:76700814-76700833 None:intergenic 40.0%
!!! CTTAGCTTTTTTTGCTGGTG+GGG - chr8_1:76700835-76700854 Msa1215440:intron 40.0%
AAAGTTGCTCAAGAGTTGGA+AGG - chr8_1:76700877-76700896 Msa1215440:CDS 40.0%
GTTCATGAGTACCTTCCAAA+AGG - chr8_1:76700920-76700939 Msa1215440:CDS 40.0%
!!! AAGTTTTGTTTGTGCCCTAG+TGG - chr8_1:76700974-76700993 Msa1215440:CDS 40.0%
TAAATTGCTTCCACCACTCT+TGG + chr8_1:76701016-76701035 None:intergenic 40.0%
!! CGTGATGTTTTTGTCCCAAG+AGG - chr8_1:76695702-76695721 Msa1215440:CDS 45.0%
TTCTGTAGATGGACCCTCTT+GGG + chr8_1:76695719-76695738 None:intergenic 45.0%
TTTCTGTAGATGGACCCTCT+TGG + chr8_1:76695720-76695739 None:intergenic 45.0%
TGATGCTGTAACTACCATCG+CGG - chr8_1:76695961-76695980 Msa1215440:intron 45.0%
AAAAAGTTGTCTGACCGCGA+TGG + chr8_1:76695978-76695997 None:intergenic 45.0%
ATCTCTTCACCATCTCCATG+TGG + chr8_1:76696119-76696138 None:intergenic 45.0%
!! TAGGGTGCTTAGCCTTAAAG+GGG + chr8_1:76696257-76696276 None:intergenic 45.0%
!! CTAGGGTGCTTAGCCTTAAA+GGG + chr8_1:76696258-76696277 None:intergenic 45.0%
!! ACTAGGGTGCTTAGCCTTAA+AGG + chr8_1:76696259-76696278 None:intergenic 45.0%
CCGTGACAGACTTCATAGAA+TGG - chr8_1:76696365-76696384 Msa1215440:CDS 45.0%
CAGACTTCATAGAATGGTGG+AGG - chr8_1:76696371-76696390 Msa1215440:CDS 45.0%
TTCTCCTCTCTTGTCATGAC+TGG - chr8_1:76696457-76696476 Msa1215440:intron 45.0%
TCTCCTCTCTTGTCATGACT+GGG - chr8_1:76696458-76696477 Msa1215440:intron 45.0%
TTACCCAGTCATGACAAGAG+AGG + chr8_1:76696464-76696483 None:intergenic 45.0%
CTAGCAACTTCAACATGCTG+AGG - chr8_1:76696508-76696527 Msa1215440:intron 45.0%
TGAAGGGTTCCAGCCTAAAA+GGG - chr8_1:76697306-76697325 Msa1215440:intron 45.0%
! TAGACACATCCCTTTTAGGC+TGG + chr8_1:76697318-76697337 None:intergenic 45.0%
! GGGATAGACACATCCCTTTT+AGG + chr8_1:76697322-76697341 None:intergenic 45.0%
CCAACTGGTAAGTACACTTC+AGG + chr8_1:76697343-76697362 None:intergenic 45.0%
CCTGAAGTGTACTTACCAGT+TGG - chr8_1:76697340-76697359 Msa1215440:intron 45.0%
AAAGTTAGGCCCACCAAATC+TGG - chr8_1:76697363-76697382 Msa1215440:intron 45.0%
AAGTTAGGCCCACCAAATCT+GGG - chr8_1:76697364-76697383 Msa1215440:intron 45.0%
!! TGGTTCTGTTTGATGGGCTT+TGG + chr8_1:76697390-76697409 None:intergenic 45.0%
GTGTCCAAGTGGATATGAAG+TGG - chr8_1:76697561-76697580 Msa1215440:intron 45.0%
CTAGCCACTTCATATCCACT+TGG + chr8_1:76697568-76697587 None:intergenic 45.0%
! AGTGGCTAGTCCAAGAATTG+TGG - chr8_1:76697579-76697598 Msa1215440:intron 45.0%
!! ATGCATGAAAGTGTCCCTTG+AGG - chr8_1:76697914-76697933 Msa1215440:intron 45.0%
CTTGACCCGTAACACTTGAA+TGG - chr8_1:76698040-76698059 Msa1215440:intron 45.0%
CGTAACACTTGAATGGAAGC+AGG - chr8_1:76698047-76698066 Msa1215440:intron 45.0%
CTCGACTCACAATATCAGTG+GGG - chr8_1:76698077-76698096 Msa1215440:intron 45.0%
CGCTTAACGTTCGTATACAC+GGG + chr8_1:76698172-76698191 None:intergenic 45.0%
! TTCAGGGGCGGATTTGAATA+GGG + chr8_1:76698635-76698654 None:intergenic 45.0%
! ATTCAGGGGCGGATTTGAAT+AGG + chr8_1:76698636-76698655 None:intergenic 45.0%
TATTCAAATCCGCCCCTGAA+TGG - chr8_1:76698635-76698654 Msa1215440:intron 45.0%
GCCATAGCCATGGTTACATT+AGG + chr8_1:76698828-76698847 None:intergenic 45.0%
CATTAATCAGGCCATAGCCA+TGG + chr8_1:76698838-76698857 None:intergenic 45.0%
CTGCCACTCACTAAACTAAC+AGG + chr8_1:76698866-76698885 None:intergenic 45.0%
CACGTGAGCATCTATGTAAG+TGG - chr8_1:76699045-76699064 Msa1215440:CDS 45.0%
!! ATAAATGGTGCCGTCAGCTA+CGG + chr8_1:76699072-76699091 None:intergenic 45.0%
TATACATGGAGGTGATGCTG+AGG - chr8_1:76699457-76699476 Msa1215440:intron 45.0%
! ATGCTGAGGCATCTTGTCTT+GGG - chr8_1:76699471-76699490 Msa1215440:intron 45.0%
TAAGTGTGATCTCCCCACAA+GGG - chr8_1:76699675-76699694 Msa1215440:intron 45.0%
GTGATGTGATTTCCCTTGTG+GGG + chr8_1:76699690-76699709 None:intergenic 45.0%
CGTGATGTGATTTCCCTTGT+GGG + chr8_1:76699691-76699710 None:intergenic 45.0%
TCGTGATGTGATTTCCCTTG+TGG + chr8_1:76699692-76699711 None:intergenic 45.0%
GTAGCTGCCATTGTTTGAAG+AGG + chr8_1:76699726-76699745 None:intergenic 45.0%
ATCTCTTCACCATCTCCATG+TGG + chr8_1:76696119-76696138 None:intergenic 45.0%
GGAGATGGTGAAGAGATTCA+AGG - chr8_1:76700199-76700218 Msa1215440:CDS 45.0%
GAGCAACCATTGGTACATGA+TGG - chr8_1:76700242-76700261 Msa1215440:CDS 45.0%
TCAGGATGAGTTGCCTTGAA+TGG + chr8_1:76700335-76700354 None:intergenic 45.0%
CAAGGCAACTCATCCTGAAT+TGG - chr8_1:76700337-76700356 Msa1215440:CDS 45.0%
CCTTGACTTCTGTTCCAGTA+AGG + chr8_1:76700503-76700522 None:intergenic 45.0%
CCTTACTGGAACAGAAGTCA+AGG - chr8_1:76700500-76700519 Msa1215440:intron 45.0%
CTTTCATGCCATGATTGGGT+AGG - chr8_1:76700539-76700558 Msa1215440:intron 45.0%
AGGCAAATTCAACTGAGGGA+TGG + chr8_1:76700762-76700781 None:intergenic 45.0%
CCAACAGGCAAATTCAACTG+AGG + chr8_1:76700767-76700786 None:intergenic 45.0%
CCTCAGTTGAATTTGCCTGT+TGG - chr8_1:76700764-76700783 Msa1215440:intron 45.0%
AAAGCTTGGCCCACCTAATA+CGG - chr8_1:76700787-76700806 Msa1215440:intron 45.0%
!! TTAGGGTGTTGGTCCGTATT+AGG + chr8_1:76700803-76700822 None:intergenic 45.0%
! TTGCCACTTCATGTCCACTA+GGG + chr8_1:76700991-76701010 None:intergenic 45.0%
! GTGGTGGAAGCAATTTATGC+AGG - chr8_1:76701019-76701038 Msa1215440:intron 45.0%
!! AATATTATTTAATTATTTGA+CGG + chr8_1:76698113-76698132 None:intergenic 5.0%
!! TGTATATATTAAAAAATAAT+AGG - chr8_1:76698469-76698488 Msa1215440:intron 5.0%
!! AAAAAGTAATAAAAAAAATT+TGG - chr8_1:76698588-76698607 Msa1215440:intron 5.0%
AATCAGGAGCCACATGGAGA+TGG - chr8_1:76696107-76696126 Msa1215440:CDS 50.0%
TAAGGCTAAGCACCCTAGTG+AGG - chr8_1:76696260-76696279 Msa1215440:CDS 50.0%
CTGAAGGGTTCCAGCCTAAA+AGG - chr8_1:76697305-76697324 Msa1215440:intron 50.0%
AGTGTCCCTTGAGGCAAGTT+TGG - chr8_1:76697923-76697942 Msa1215440:intron 50.0%
GCTCGTAAGAGCTTGTCTAC+TGG - chr8_1:76697951-76697970 Msa1215440:intron 50.0%
! GATGCTGAGGCATCTTGTCT+TGG - chr8_1:76699470-76699489 Msa1215440:intron 50.0%
! TGCTGAGGCATCTTGTCTTG+GGG - chr8_1:76699472-76699491 Msa1215440:intron 50.0%
GTAAGTGTGATCTCCCCACA+AGG - chr8_1:76699674-76699693 Msa1215440:intron 50.0%
TCCATGTGGCTCCTGCTTTA+GGG + chr8_1:76700182-76700201 None:intergenic 50.0%
CAAGGAAGGAGAGCAACCAT+TGG - chr8_1:76700232-76700251 Msa1215440:CDS 50.0%
TGCAATGCCAACACCTCAGA+AGG - chr8_1:76700713-76700732 Msa1215440:intron 50.0%
GGGATGGACACATCTCTGTT+AGG + chr8_1:76700746-76700765 None:intergenic 50.0%
!! GGTGTTGGTCCGTATTAGGT+GGG + chr8_1:76700799-76700818 None:intergenic 50.0%
!!! TTTTTTGCTGGTGGGGCACA+TGG - chr8_1:76700842-76700861 Msa1215440:intron 50.0%
GCTCAAGAGTTGGAAGGACA+AGG - chr8_1:76700883-76700902 Msa1215440:CDS 50.0%
! CTTGCCACTTCATGTCCACT+AGG + chr8_1:76700992-76701011 None:intergenic 50.0%
TGAAGTGGCAAGTCCAAGAG+TGG - chr8_1:76701000-76701019 Msa1215440:intron 50.0%
GGTGGGCCTAACTTTCCAAC+TGG + chr8_1:76697358-76697377 None:intergenic 55.0%
! GGCTTTGGCCCAGATTTGGT+GGG + chr8_1:76697375-76697394 None:intergenic 55.0%
! GATGGGCTTTGGCCCAGATT+TGG + chr8_1:76697379-76697398 None:intergenic 55.0%
ATGGGCCCCACCAGAAAAGA+AGG + chr8_1:76697419-76697438 None:intergenic 55.0%
!! TTCTTTTCTGGTGGGGCCCA+TGG - chr8_1:76697418-76697437 Msa1215440:intron 55.0%
CACTTGAATGGAAGCAGGGG+CGG - chr8_1:76698052-76698071 Msa1215440:intron 55.0%
! GGGCGGATTTGAATAGGGCA+TGG + chr8_1:76698630-76698649 None:intergenic 55.0%
AGGAGTCTTCCATTCAGGGG+CGG + chr8_1:76698647-76698666 None:intergenic 55.0%
TGTAAGTGGGCCGTAGCTGA+CGG - chr8_1:76699059-76699078 Msa1215440:CDS 55.0%
CCATGTGGCTCCTGCTTTAG+GGG + chr8_1:76700181-76700200 None:intergenic 55.0%
CTCCATGTGGCTCCTGCTTT+AGG + chr8_1:76700183-76700202 None:intergenic 55.0%
AAGCAGGAGCCACATGGAGA+TGG - chr8_1:76700184-76700203 Msa1215440:CDS 55.0%
!! GGGTGTTGGTCCGTATTAGG+TGG + chr8_1:76700800-76700819 None:intergenic 55.0%
! GTGCCCTAGTGGACATGAAG+TGG - chr8_1:76700985-76701004 Msa1215440:intron 55.0%
AGTGGCAAGTCCAAGAGTGG+TGG - chr8_1:76701003-76701022 Msa1215440:intron 55.0%
! GGGCTTTGGCCCAGATTTGG+TGG + chr8_1:76697376-76697395 None:intergenic 60.0%
CCCCTAAAGCAGGAGCCACA+TGG - chr8_1:76700178-76700197 Msa1215440:CDS 60.0%
GGTGGGCCAAGCTTTCCAAC+AGG + chr8_1:76700782-76700801 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 76695266 76701324 76695266 ID=Msa1215440;Name=Msa1215440
chr8_1 mRNA 76695266 76701324 76695266 ID=Msa1215440-mRNA-1;Parent=Msa1215440;Name=Msa1215440-mRNA-1;_AED=0.13;_eAED=0.13;_QI=0|0.16|0.14|1|1|1|7|0|819
chr8_1 exon 76701094 76701324 76701094 ID=Msa1215440-mRNA-1:exon:26414;Parent=Msa1215440-mRNA-1
chr8_1 exon 76700866 76700993 76700866 ID=Msa1215440-mRNA-1:exon:26413;Parent=Msa1215440-mRNA-1
chr8_1 exon 76700111 76700477 76700111 ID=Msa1215440-mRNA-1:exon:26412;Parent=Msa1215440-mRNA-1
chr8_1 exon 76698759 76699358 76698759 ID=Msa1215440-mRNA-1:exon:26411;Parent=Msa1215440-mRNA-1
chr8_1 exon 76696641 76696738 76696641 ID=Msa1215440-mRNA-1:exon:26410;Parent=Msa1215440-mRNA-1
chr8_1 exon 76696034 76696400 76696034 ID=Msa1215440-mRNA-1:exon:26409;Parent=Msa1215440-mRNA-1
chr8_1 exon 76695266 76695934 76695266 ID=Msa1215440-mRNA-1:exon:26408;Parent=Msa1215440-mRNA-1
chr8_1 CDS 76701094 76701324 76701094 ID=Msa1215440-mRNA-1:cds;Parent=Msa1215440-mRNA-1
chr8_1 CDS 76700866 76700993 76700866 ID=Msa1215440-mRNA-1:cds;Parent=Msa1215440-mRNA-1
chr8_1 CDS 76700111 76700477 76700111 ID=Msa1215440-mRNA-1:cds;Parent=Msa1215440-mRNA-1
chr8_1 CDS 76698759 76699358 76698759 ID=Msa1215440-mRNA-1:cds;Parent=Msa1215440-mRNA-1
chr8_1 CDS 76696641 76696738 76696641 ID=Msa1215440-mRNA-1:cds;Parent=Msa1215440-mRNA-1
chr8_1 CDS 76696034 76696400 76696034 ID=Msa1215440-mRNA-1:cds;Parent=Msa1215440-mRNA-1
chr8_1 CDS 76695266 76695934 76695266 ID=Msa1215440-mRNA-1:cds;Parent=Msa1215440-mRNA-1
Gene Sequence

>Msa1215440

ATGGAGGCTTTACGATGTTTCACAGCATCACTGTTACTATCACTCTTCTTCTTCCTCACTTATCTCTTCACTTCTCAAAAAGGATATCATTTTTCCTTCTTTGTTTTTCCTTTCTCTCTTCCTAGCATAAAAGACATGAATAACACAACACAAGTAATTAAACCTCATCAGTTTCTGACTTATAACTCTGCATATAGAAGCTTTGACCATAAAGCAAACAGTAGCATTAAGAAAATTATGACTAGCTTGGATAGAGTTGAAGAAAGTTTGGCAGAAGCTCGAGCCTCAATTCGAGAAGCAATTCTTTCAAGGAATTACAGTACTACTTCAAGGAGGCGTGATGTTTTTGTCCCAAGAGGGAGCCACATGGAGATGGTGAAGAGATTGAAGATATGGGTATACAAAGAAGGAGAGCAACCAATAGTACATGATGGACCATTGAACAACATATATGCAATTGAAGGTCAATTCATTGATGAAATAGACAATAGCATAAAGAGCCCCTTTAAGGCTAAGCACCCTAGTGAGGCACACATATTTTTCCTTCCTTTTAGTGTTGCAAATGTGGTTCAATATGTTTATAAGCCAATTATGTCCAAAAAGGATTTCAACCGTGACAGACTTCATAGAATGGTGGAGGATTATGTAAATGTTGTTGCTGATAAGTATCCTTATTGGAATAGAAGTAATGGTGCTGACCATTTTCTCCTCTCTTGTCATGACTGGGCACCAGAAATCTCAGATGCAAATCCAAACCTCTTCAAAAACTTCACAAGAGTCTTATGCAATGCAAACACTTCTGAAGGGTTCCAGCCTAAAAGGGATGTGTCTATCCCTGAAGTGTACTTACCAGTTGGAAAGTTAGGCCCACCAAATCTGGGCCAAAGCCCATCAAACAGAACCACATTAGCCTTCTTTTCTGGTGGGGCCCATGGTGACCTTAGAAAATTGTTACTAAATCATTGGAAGGACAAAGATGCACAAGTTCAAGTTCATGAGTATCTTCCAAAGGGTCAAAACTATACACAATTAATGGGACTAAGTAAATTTTGTTTGTGTCCAAGTGGATATGAAGTGGCTAGTCCAAGAATTGTGGAAGCAATTAATGCTGGGTGTGTGCCTGTGATTATTTCTCAGAATTATTCCTTGCCTTTCAATGATGTGTTGAATTGGAGTGAATTTTCAGTGGAGATTCCAGTGGAGAAAATAGTAGAGATTAAGACTATATTACAAAATATTTCAAAAGATAAGTACATGAAGTTGCATATGAATGTGATGAAAGTTCAAAAGCATTTTGTTATGAATAGGCCTGCTAAGCCTTTTGATTTTGGTCATAGGAGAAAGAATATGACTAGTTTGGAGAGGATTGAAGAAGGTTTATCACAAACACGAGCATTGATTCAGAAAGCAATTCGGTCCAAGAAGAGCCACATGGAGATGGTGAAGAGATTCAAGGTATGGGTATACAAGGAAGGAGAGCAACCATTGGTACATGATGGACCTGTAAACAACAAATATTCCATAGAAGGTCAATTCATTGATGAAATAGACACAAGTAACAAGAGTCCATTCAAGGCAACTCATCCTGAATTGGCCCATGTTTTCTTTCTTCCTTTCAGTGTGTCTAAGGTCATTCGCTATGTTTACAAGCCTAGAAGGTCTAGATCAGATTATGATCCTCATCGGTTACAGCTTTTAGTTGAGGACTATATTAGCATTGTTGCAAACAAGTATCCTTACTGGAACAGAAGTCAAGGTGCTGACCATTTTCTGCTTTCATGCCATGATTGGGGACCAAGAGTTTCTTATGCTAATCCTAAACTCTTCAAGTACTTCATCAGGGCACTCTGCAATGCCAACACCTCAGAAGGATTTTTGCCTAACAGAGATGTGTCCATCCCTCAGTTGAATTTGCCTGTTGGAAAGCTTGGCCCACCTAATACGGACCAACACCCTAATAACCGAACAATCTTAGCTTTTTTTGCTGGTGGGGCACATGGTAAGATTAGAAAAAAGTTGCTCAAGAGTTGGAAGGACAAGGATGAAGAAGTTCAAGTTCATGAGTACCTTCCAAAAGGTCAAGATTATACAAAGTTGATGGGTCTAAGTAAGTTTTGTTTGTGCCCTAGTGGACATGAAGTGGCAAGTCCAAGAGTGGTGGAAGCAATTTATGCAGGTTGTGTGCCAGTGATAATTTGTGACAATTACTCTTTGCCTTTTAGTGATGTGCTTAATTGGAGTCAATTCTCCATGGAAATTGGAGTTGATAGAATACCAGAAATTAAGACTATTTTACAAAATATTACAGAAACAAAGTATAGGGTGTTGTATTCAAATGTTAGACGTGTACGAAAGCATTTTCAGATGAATAGGCCAGCAAAGCCATTTGATTTGATACATATGATACTTCACTCTGTTTGGCTTAGACGTTTAAATTTTAGGTTAATAATGTCTGATTAA
Protein sequence

>Msa1215440

MEALRCFTASLLLSLFFFLTYLFTSQKGYHFSFFVFPFSLPSIKDMNNTTQVIKPHQFLTYNSAYRSFDHKANSSIKKIMTSLDRVEESLAEARASIREAILSRNYSTTSRRRDVFVPRGSHMEMVKRLKIWVYKEGEQPIVHDGPLNNIYAIEGQFIDEIDNSIKSPFKAKHPSEAHIFFLPFSVANVVQYVYKPIMSKKDFNRDRLHRMVEDYVNVVADKYPYWNRSNGADHFLLSCHDWAPEISDANPNLFKNFTRVLCNANTSEGFQPKRDVSIPEVYLPVGKLGPPNLGQSPSNRTTLAFFSGGAHGDLRKLLLNHWKDKDAQVQVHEYLPKGQNYTQLMGLSKFCLCPSGYEVASPRIVEAINAGCVPVIISQNYSLPFNDVLNWSEFSVEIPVEKIVEIKTILQNISKDKYMKLHMNVMKVQKHFVMNRPAKPFDFGHRRKNMTSLERIEEGLSQTRALIQKAIRSKKSHMEMVKRFKVWVYKEGEQPLVHDGPVNNKYSIEGQFIDEIDTSNKSPFKATHPELAHVFFLPFSVSKVIRYVYKPRRSRSDYDPHRLQLLVEDYISIVANKYPYWNRSQGADHFLLSCHDWGPRVSYANPKLFKYFIRALCNANTSEGFLPNRDVSIPQLNLPVGKLGPPNTDQHPNNRTILAFFAGGAHGKIRKKLLKSWKDKDEEVQVHEYLPKGQDYTKLMGLSKFCLCPSGHEVASPRVVEAIYAGCVPVIICDNYSLPFSDVLNWSQFSMEIGVDRIPEIKTILQNITETKYRVLYSNVRRVRKHFQMNRPAKPFDLIHMILHSVWLRRLNFRLIMSD*